Citrus Sinensis ID: 024228
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 270 | 2.2.26 [Sep-21-2011] | |||||||
| P0A573 | 341 | Uncharacterized protein M | yes | no | 0.392 | 0.310 | 0.342 | 6e-08 | |
| P0A572 | 341 | Uncharacterized protein R | yes | no | 0.392 | 0.310 | 0.342 | 6e-08 | |
| Q48MQ7 | 259 | Putative aminoacrylate hy | no | no | 0.718 | 0.749 | 0.246 | 1e-06 | |
| Q0IIS3 | 367 | Epoxide hydrolase 3 OS=Xe | yes | no | 0.881 | 0.648 | 0.218 | 1e-06 | |
| A8GCT3 | 267 | Putative aminoacrylate hy | no | no | 0.3 | 0.303 | 0.378 | 2e-06 | |
| Q4ZXS0 | 259 | Putative aminoacrylate hy | no | no | 0.737 | 0.768 | 0.247 | 2e-06 | |
| Q8IUS5 | 362 | Epoxide hydrolase 4 OS=Ho | yes | no | 0.351 | 0.262 | 0.284 | 4e-06 | |
| Q6IE26 | 359 | Epoxide hydrolase 4 OS=Mu | yes | no | 0.351 | 0.264 | 0.284 | 6e-06 | |
| A4VQH7 | 265 | Putative aminoacrylate hy | yes | no | 0.285 | 0.290 | 0.345 | 8e-05 | |
| A0KF11 | 254 | Pimelyl-[acyl-carrier pro | yes | no | 0.348 | 0.370 | 0.306 | 9e-05 |
| >sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
A++L+H G D TW LA+ + V PD L G S R D + + A M L
Sbjct: 39 AILLIHGIG-DNSTTWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDLL 97
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154
L +E+ T+VG S GG V + A +P LV+ +++ S G+T+ V+
Sbjct: 98 SVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLIL-VSAGGVTKDVN 144
|
Mycobacterium bovis (taxid: 1765) |
| >sp|P0A572|Y2715_MYCTU Uncharacterized protein Rv2715/MT2788 OS=Mycobacterium tuberculosis GN=Rv2715 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
A++L+H G D TW LA+ + V PD L G S R D + + A M L
Sbjct: 39 AILLIHGIG-DNSTTWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMRDLL 97
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154
L +E+ T+VG S GG V + A +P LV+ +++ S G+T+ V+
Sbjct: 98 SVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLIL-VSAGGVTKDVN 144
|
Mycobacterium tuberculosis (taxid: 1773) |
| >sp|Q48MQ7|RUTD_PSE14 Putative aminoacrylate hydrolase RutD OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 62 WQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLRKLGVEKCTLVGVS 120
W + AL + ++V V D G S D P D + A + L LG+++C +G +
Sbjct: 29 WADDLAALTRDHDVLVYDHAGTGRSPADLPADYSIRHMAMELLTLLDSLGIQRCHFMGHA 88
Query: 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTE------SVSNAALERIGYESWVD----FL 170
GG+VG ++A + P+L++S V+ + SV L G +++V FL
Sbjct: 89 LGGLVGLEIALLRPELLQSQVLINAWSSPNPHSARCFSVRKKLLLNSGPDAYVQAQALFL 148
Query: 171 LPK---TADALKVQFDIACYKLPTLPAFVYKHILEKIH-------------------LLW 208
P A+ ++ D A + L P ++L +IH L+
Sbjct: 149 YPADWIAANGARLADDEA-HALAHFPG--TDNLLRRIHALQTFDVEASLARIQTPTLLIA 205
Query: 209 GENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259
+D + Q +++L E + NA + +E GH N+ P + R L L
Sbjct: 206 NRDDMLVPWQQSQHLAEAL-PNARLVLLEYGGHASNITDPLPFQRTLLDFL 255
|
May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) (taxid: 264730) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|Q0IIS3|EPHX3_XENTR Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 107/293 (36%), Gaps = 55/293 (18%)
Query: 26 IEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGS 85
I ++ I +V + ++LLH F + +W++Q+ + Y D FG
Sbjct: 78 IRMKDSGIRFHYVASGDKRNPLMLLLHGFP-ENWYSWRYQLDEFSNGYRTVAIDLRGFGG 136
Query: 86 SVTDRPDRTASFQAECMAKGL----RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV 141
S D P R ++ E + + L R LG +C LVG +GG + + A + D+V ++
Sbjct: 137 S--DAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLI 194
Query: 142 VTCS--VMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLP--------- 190
V + + V + + F LP + L D K P
Sbjct: 195 VMNAPHPSAFHDYVLSHPSQLFSSRYVFLFQLPLIPEILLSLRDFEHIKKPLTDATHGIQ 254
Query: 191 ---------TLPAFVY--------------------------KHILEKIHLLWGENDKIF 215
+ AFVY + +L LLWGE+D
Sbjct: 255 NVECKLSKEEVEAFVYYPSQKGALTPPLNYYRNLFGFFPVKAQDVLVPTLLLWGEHDAFL 314
Query: 216 DMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS--LVHAN 266
+ + +++ V E I A H + +RP N+ ++ L LVH N
Sbjct: 315 EAAMVPEMQQYVRAPFRAEIIPNASHWLQQDRPQEVNKIIRDFLKEDFLVHRN 367
|
Xenopus tropicalis (taxid: 8364) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|A8GCT3|RUTD_SERP5 Putative aminoacrylate hydrolase RutD OS=Serratia proteamaculans (strain 568) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 62 WQFQVLALAKTYEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKLGVEKCTLVGVS 120
WQ Q+ AL + + V V D S PD + + A+ +A+ LR L V+ C VG +
Sbjct: 29 WQPQINALGEHFRVVVYDHFGTARSKGSVPDGYSMADMADEVAQLLRSLNVDCCYFVGHA 88
Query: 121 YGGMVGFKMAEMYPDLVESMVV 142
GGM+G ++A +P LVE +VV
Sbjct: 89 LGGMIGLQLALTHPQLVEKLVV 110
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May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Serratia proteamaculans (strain 568) (taxid: 399741) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|Q4ZXS0|RUTD_PSEU2 Putative aminoacrylate hydrolase RutD OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 31/230 (13%)
Query: 62 WQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLRKLGVEKCTLVGVS 120
W + L + Y V V D G S P D + A + L L +++C +G +
Sbjct: 29 WADDLTLLTRDYHVLVYDHAGTGRSPAVLPADYSIRHMAIELLALLDSLDIQRCHFMGHA 88
Query: 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTE------SVSNAALERIGYESWVD----FL 170
GG+VG ++A + P+L+ S V+ + SV L G E++V FL
Sbjct: 89 LGGLVGLELALLRPELLHSQVLINAWSSPNPHSARCFSVRKKLLLNSGPEAYVQAQALFL 148
Query: 171 LPK---TADALKVQFDIA------------CYKLPTLPAFVYKHILEKIH----LLWGEN 211
P A+ ++ D A ++ L F L +IH L+ +
Sbjct: 149 YPADWIAANGPRLADDEAHALAHFPDTDNLLRRIHALETFDVSAELSRIHTPTLLIANRD 208
Query: 212 DKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261
D + Q +R+L + NAT+ +E GH N+ P + R L+ L++
Sbjct: 209 DMLVPWQQSRHLANAL-PNATLVLLEYGGHASNITDPLPFQRALRAFLST 257
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May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
K ++LLH F + +W++Q+ Y V D +G TD P +++ +C+
Sbjct: 93 KPLMLLLHGFP-EFWYSWRYQLREFKSEYRVVALDLRGYGE--TDAPIHRQNYKLDCLIT 149
Query: 105 GLR----KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
++ LG KC L+G +GGM+ + +A YP++V ++V
Sbjct: 150 DIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV 191
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Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
K ++LLH F + +W+ Q+ Y V D +G S D P S++ +C+
Sbjct: 91 KPLMLLLHGFP-EFWYSWRHQLREFKSEYRVVALDLRGYGES--DAPAHQESYKLDCLIA 147
Query: 105 GLR----KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
++ LG KC L+G +GGM+ + +A YP+++ ++V
Sbjct: 148 DIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIV 189
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Mus musculus (taxid: 10090) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|A4VQH7|RUTD_PSEU5 Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri (strain A1501) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 62 WQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA----KGLRKLGVEKCTLV 117
W Q+ AL + Y V V D L S + P A + E MA + L LG+ +C +
Sbjct: 29 WLPQLPALTQDYRVLVYDQLGTNKSPANLP---AGYSIESMAVELLELLDTLGIRRCHFI 85
Query: 118 GVSYGGMVGFKMAEMYPDLVESMV 141
G + GG+VG ++A + P L++S+V
Sbjct: 86 GHALGGLVGLQIALLRPQLLQSLV 109
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May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Pseudomonas stutzeri (strain A1501) (taxid: 379731) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|A0KF11|BIOH_AERHH Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=bioH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 48 VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107
+VLLH +G +G + W V ALA Y V++ D FG+S + +A+ +
Sbjct: 14 LVLLHGWGMNGAV-WHGIVPALASRYRVHLVDLPGFGNSPLAG---EVEYSLPWLAEEVA 69
Query: 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145
+ E+C L+G S GG+V ++A +P+ + S++ S
Sbjct: 70 AILPEQCHLLGWSLGGLVASQLALSHPERLHSLITVAS 107
|
The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters. Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) (taxid: 380703) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 8 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 270 | ||||||
| 224105383 | 302 | predicted protein [Populus trichocarpa] | 0.981 | 0.877 | 0.570 | 3e-92 | |
| 224077844 | 307 | predicted protein [Populus trichocarpa] | 0.988 | 0.869 | 0.555 | 1e-88 | |
| 359475342 | 303 | PREDICTED: putative aminoacrylate hydrol | 0.970 | 0.864 | 0.511 | 9e-79 | |
| 359475344 | 304 | PREDICTED: putative aminoacrylate hydrol | 0.970 | 0.861 | 0.508 | 3e-78 | |
| 225430746 | 314 | PREDICTED: protein PHYLLO, chloroplastic | 0.970 | 0.834 | 0.488 | 1e-77 | |
| 255561126 | 317 | abhydrolase domain containing, putative | 0.970 | 0.826 | 0.480 | 1e-77 | |
| 356559398 | 316 | PREDICTED: epoxide hydrolase 3-like [Gly | 0.988 | 0.844 | 0.460 | 2e-77 | |
| 357518259 | 314 | Epoxide hydrolase [Medicago truncatula] | 0.985 | 0.847 | 0.471 | 5e-77 | |
| 224077842 | 227 | predicted protein [Populus trichocarpa] | 0.748 | 0.889 | 0.653 | 9e-77 | |
| 356559396 | 316 | PREDICTED: epoxide hydrolase 4-like [Gly | 0.985 | 0.841 | 0.467 | 1e-76 |
| >gi|224105383|ref|XP_002313792.1| predicted protein [Populus trichocarpa] gi|222850200|gb|EEE87747.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/303 (57%), Positives = 215/303 (70%), Gaps = 38/303 (12%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTT-KKHAVVLLHPFGFDGI 59
MVN +++YK LL GL+KL G+T R +EIEPGT+++ W+P + K AVV LH FGF+GI
Sbjct: 1 MVNTLSLYKPLLQGLMKLAGVTPRAVEIEPGTVIHFWIPTENKPSKPAVVFLHGFGFNGI 60
Query: 60 LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV 119
L+WQFQVLALAK Y VYVPDFLFFG S+TDR +R+ +FQAECMAK LRKLGVEKCTLVG+
Sbjct: 61 LSWQFQVLALAKEYSVYVPDFLFFGGSITDRTERSPAFQAECMAKCLRKLGVEKCTLVGL 120
Query: 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALK 179
SYGGMVGFKMAEM+PDLV+S VV+CSVM LTES+S A+LERIG+ SWV L+P T + +K
Sbjct: 121 SYGGMVGFKMAEMFPDLVDSFVVSCSVMALTESISRASLERIGFPSWVKHLVPDTVEGVK 180
Query: 180 VQFDIACYKLPTLPAFVYKHILE-----------------------------------KI 204
D++ YK +P F+YK + E +I
Sbjct: 181 KIVDVSTYKSLWMPHFLYKDVFETAYNINRKERVELLDALIVKDEDFSLTSYPQNTAKRI 240
Query: 205 HLLWGENDKIFDMQVARNLKEQ-VGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263
HLLWGE D IF+M+VARNL+E+ +G AT+ +EKAGH+V ERP YNRQLK ILASL
Sbjct: 241 HLLWGEEDIIFNMEVARNLQERLLGGKATLHYVEKAGHVVQSERPCAYNRQLKKILASL- 299
Query: 264 HAN 266
+AN
Sbjct: 300 YAN 302
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077844|ref|XP_002305433.1| predicted protein [Populus trichocarpa] gi|222848397|gb|EEE85944.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 206/306 (67%), Gaps = 39/306 (12%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTT--------KKHAVVLLH 52
MVN++T+Y LL L+KLVG+ + +EIEPGT++ WVP T K AVV +H
Sbjct: 1 MVNVLTMYMSLLRALMKLVGVKPQAVEIEPGTVMRFWVPSDQTTSNTKNKPDKPAVVFVH 60
Query: 53 PFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE 112
F DGILTWQFQVLALAK Y VYVPD LFFG S+TD+ +R +FQAEC AKGL KLGVE
Sbjct: 61 GFELDGILTWQFQVLALAKEYAVYVPDLLFFGESITDKKERKVAFQAECTAKGLTKLGVE 120
Query: 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172
KCTLVG+SYGG+V FKMAEMYPDLVESMVV C+VM +TES+S A LERIG+ SW ++L+P
Sbjct: 121 KCTLVGMSYGGVVCFKMAEMYPDLVESMVVGCTVMAMTESISRAGLERIGFSSWSEYLMP 180
Query: 173 KTADALKVQFDIACYKLPTLPAFVYKHILE------------------------------ 202
T +K +A YKLP +P FV+K ILE
Sbjct: 181 DTVKGVKDLLLVATYKLPWMPDFVFKSILEVMFDNRKERLELLQELVVSDKDFIVPRFSQ 240
Query: 203 KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262
KIHLLWG +D IF+M+ ARNLKEQ+ AT++ IE AGHLV ERP YN+ LK ILASL
Sbjct: 241 KIHLLWGGDDIIFNMEEARNLKEQLEGKATLQFIENAGHLVQSERPSAYNKHLKKILASL 300
Query: 263 VHANGQ 268
H +G+
Sbjct: 301 -HEDGK 305
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475342|ref|XP_003631664.1| PREDICTED: putative aminoacrylate hydrolase RutD-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 152/297 (51%), Positives = 196/297 (65%), Gaps = 35/297 (11%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGF 56
MVNI+T+ K L+ L+K G+ + +EIEPGT++N W P K T+K VVL+H FG
Sbjct: 1 MVNIVTLQKSLVQILMKFNGVEPKKVEIEPGTVMNFWAPAKQKNEETQKPNVVLVHGFGV 60
Query: 57 DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTL 116
DGILTW FQVLAL Y VYVPD LFFG S T +R+ FQAEC+A GLRKLGVE+C +
Sbjct: 61 DGILTWMFQVLALKSHYSVYVPDLLFFGDSATAAGNRSPRFQAECLATGLRKLGVERCVV 120
Query: 117 VGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTAD 176
VG+SYGGM+GFKMAE+YPDLVESMVV+ SV LTES+SN L+R+G+ W + L+P T +
Sbjct: 121 VGLSYGGMIGFKMAELYPDLVESMVVSGSVEALTESLSNRRLKRLGFRRWSECLMPTTVE 180
Query: 177 ALKVQFDIACYKLPT-LPAFVYKHILE------------------------------KIH 205
+K F + + LP +P +++K LE +I+
Sbjct: 181 GVKEMFRVGTHWLPPWIPNWIFKDYLEVMFSHRKEREELLEALVIRDEDFTPYHYHQRIY 240
Query: 206 LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262
LLWG+ DK+FD++VA NLKEQ+G+ A ++ IEKAGHL ERP VYN LK ILASL
Sbjct: 241 LLWGDGDKLFDLEVAHNLKEQLGEKAKLQYIEKAGHLAQSERPCVYNAHLKQILASL 297
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475344|ref|XP_003631665.1| PREDICTED: putative aminoacrylate hydrolase RutD-like isoform 2 [Vitis vinifera] gi|297741467|emb|CBI32598.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/297 (50%), Positives = 194/297 (65%), Gaps = 35/297 (11%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGF 56
MVNI+T+ K L+ L+K G+ + +EIEPGT++N W P K T+K VVL+H FG
Sbjct: 1 MVNIVTLQKSLVQILMKFNGVEPKKVEIEPGTVMNFWAPAKQKNEETQKPNVVLVHGFGV 60
Query: 57 DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTL 116
DGILTW FQVLAL Y VYVPD LFFG S T +R+ FQAEC+A GLRKLGVE+C +
Sbjct: 61 DGILTWMFQVLALKSHYSVYVPDLLFFGDSATAAGNRSPRFQAECLATGLRKLGVERCVV 120
Query: 117 VGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTAD 176
VG+SYGGM+GFKMAE+YPDLVESMVV+ SV LTES+SN L+R+G+ W + L+P T +
Sbjct: 121 VGLSYGGMIGFKMAELYPDLVESMVVSGSVEALTESLSNRRLKRLGFRRWSECLMPTTVE 180
Query: 177 ALKVQFDIACYKLPT-LPAFVYKHILE------------------------------KIH 205
+K F + + LP +P +++K LE +I+
Sbjct: 181 GVKEMFRVGTHWLPPWIPNWIFKDYLEVMFSHRKEREELLEALVIRDEDFTPYHYHQRIY 240
Query: 206 LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262
LLWG+ DK+FD++VA NLKEQ+G A ++ IEKAGHL ERP YN LK ILASL
Sbjct: 241 LLWGDGDKLFDLEVAHNLKEQLGDKAKLQCIEKAGHLSQFERPCAYNAHLKRILASL 297
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430746|ref|XP_002266831.1| PREDICTED: protein PHYLLO, chloroplastic [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/307 (48%), Positives = 196/307 (63%), Gaps = 45/307 (14%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTTKKH-------------- 46
MVN++ K LLHGL+K+ G+ +EIEPGT++N WVP +T +K
Sbjct: 1 MVNLVAAQKPLLHGLMKMAGVRPHMVEIEPGTVMNFWVPCETVEKPKKKGDISSLRKPTK 60
Query: 47 -AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
VVL+H F +GI+TWQFQV AL K Y VYVPD LFFG S TD+ DR+ +FQAEC+ KG
Sbjct: 61 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGDSTTDKSDRSPTFQAECLEKG 120
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES 165
LRKLGVEKCT+VG SYGGMV FKMAE++ DLV+++VV+ S++ +T+S+S A L+R+G+ S
Sbjct: 121 LRKLGVEKCTIVGFSYGGMVAFKMAELHQDLVQAVVVSGSILAMTDSISEATLQRLGFAS 180
Query: 166 WVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE----------------------- 202
+ LLP + LK +A +K P ++K LE
Sbjct: 181 SSELLLPTSVKGLKALLSVAAHKKLWFPDRLHKDYLEVMFTNRQERGDLLEALVVSTKDT 240
Query: 203 -------KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQL 255
KIHLLWGEND+IF ++A N+KEQ+G AT + I+KAGHLV+LERP VYNR L
Sbjct: 241 NVPNFPQKIHLLWGENDQIFKQELAHNMKEQLGDKATFQGIKKAGHLVHLERPCVYNRHL 300
Query: 256 KTILASL 262
K LASL
Sbjct: 301 KLFLASL 307
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561126|ref|XP_002521575.1| abhydrolase domain containing, putative [Ricinus communis] gi|223539253|gb|EEF40846.1| abhydrolase domain containing, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 200/310 (64%), Gaps = 48/310 (15%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTTKKH-------------- 46
MVN++ K LLHGL+K+ G+ +++IE GT++N WVP +T +K
Sbjct: 1 MVNLVAAQKPLLHGLMKMAGVIPHSVQIELGTVMNFWVPVETIRKPRKDEETPKTQTLTT 60
Query: 47 ----AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECM 102
VVL+H F +GI+TWQFQV AL K Y VYVPD LFFG S+TD+ DR+ FQAE +
Sbjct: 61 PAKPVVVLIHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGGSLTDKTDRSPVFQAETV 120
Query: 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162
KGL+KLGV+KCT+VG SYGGMV FKMAE+YPD+V++MV++ S++ +T+S+S+A L R+G
Sbjct: 121 VKGLKKLGVQKCTVVGFSYGGMVAFKMAELYPDMVQAMVISGSILAMTDSISDATLSRLG 180
Query: 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE-------------------- 202
++S + LLP + LK +A YK P ++K LE
Sbjct: 181 FKSSSELLLPTSVKGLKALLSVAAYKKLWFPNRLHKDFLEVMFTNRNERAELLEGLVISN 240
Query: 203 ----------KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYN 252
KIHLLWGEND+IF ++ A+N+KEQ+G+NAT E I+KAGHLV+LERP VYN
Sbjct: 241 KDPTIHKFPQKIHLLWGENDEIFKLEFAQNMKEQLGENATFEGIKKAGHLVHLERPCVYN 300
Query: 253 RQLKTILASL 262
R LK LASL
Sbjct: 301 RCLKKFLASL 310
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559398|ref|XP_003547986.1| PREDICTED: epoxide hydrolase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 200/313 (63%), Gaps = 46/313 (14%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTTKKH-------------- 46
MVN++ + LLHGL+K+ G+ T+EIEPGT+++ WVP +T K
Sbjct: 1 MVNLVAAQRPLLHGLMKMAGVRPYTVEIEPGTVMSFWVPSETLTKPKKKNEKPRISSKPS 60
Query: 47 --AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
AVVL+H FG +GI+TWQ+QV AL K Y VYVPD LFFG S TD+P R+ +FQA+C+
Sbjct: 61 RPAVVLVHGFGAEGIMTWQYQVGALTKKYAVYVPDLLFFGGSTTDKPHRSPAFQAQCVVA 120
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164
GLRKLGVEKC +VG SYGGMV FKMAEMYP++VE++V+T S++ +T+S+S +L+ +G+
Sbjct: 121 GLRKLGVEKCIVVGYSYGGMVAFKMAEMYPEVVEALVITGSILAMTDSISATSLQELGFS 180
Query: 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE---------------------- 202
S + LLP + LK +A +K P + K LE
Sbjct: 181 SSSELLLPTSVKGLKALLTVASHKKQWYPNRLLKDYLEVMITNRKERGELLEALVVSDKD 240
Query: 203 --------KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254
+IHLLWGENDKIF++++A+N+KEQ+G T E+I+KAGH+VN+ERP ++NR
Sbjct: 241 IIIPNFPQRIHLLWGENDKIFNLELAQNMKEQLGDGTTFEAIKKAGHMVNMERPRLFNRC 300
Query: 255 LKTILASLVHANG 267
LK +AS + NG
Sbjct: 301 LKQFIASFLAPNG 313
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518259|ref|XP_003629418.1| Epoxide hydrolase [Medicago truncatula] gi|355523440|gb|AET03894.1| Epoxide hydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 197/312 (63%), Gaps = 46/312 (14%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKT----------------TK 44
MVN++ K L+HGL+K+ G+ T+EIE GT +N WVP +T T
Sbjct: 1 MVNLVAAQKPLMHGLMKMAGIRPYTVEIESGTTMNFWVPSETITKPKKKEEKPKITAKTN 60
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
K VVL+H F +GI+TWQFQV AL K Y VYVPD LFFG S TD+ +R+ FQAEC+A
Sbjct: 61 KPVVVLVHGFASEGIVTWQFQVGALTKKYAVYVPDLLFFGGSTTDKTERSPRFQAECLAI 120
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164
LRKLGVEKC +VG SYGGMV FKMAEMYPDLV+++V++ S++ +T+S+S ++L+ +G+
Sbjct: 121 ALRKLGVEKCIVVGFSYGGMVAFKMAEMYPDLVQALVISGSILAMTDSISVSSLQELGFS 180
Query: 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE---------------------- 202
S + LLP + LK +A YK P ++K LE
Sbjct: 181 SSSELLLPNSVKGLKALLSVAAYKKLWFPDRLHKDFLEVMFTNRKERGELLDGLVISNKD 240
Query: 203 --------KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254
+IHLLWGEND+IF +++A+N+KEQ+G AT E I+KAGHLV+LERP VYNR
Sbjct: 241 VSIPNFSQRIHLLWGENDQIFKLELAQNMKEQLGDGATFEGIKKAGHLVHLERPCVYNRC 300
Query: 255 LKTILASLVHAN 266
LK +AS + +N
Sbjct: 301 LKKFIASFLASN 312
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077842|ref|XP_002305432.1| predicted protein [Populus trichocarpa] gi|222848396|gb|EEE85943.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 167/205 (81%), Gaps = 3/205 (1%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTT---KKHAVVLLHPFGFD 57
MVN +++YK LL+GL+K+ GM ++ +EIE GT++N WVP T +K AVV LH FGFD
Sbjct: 1 MVNTLSLYKPLLYGLMKVAGMRRQVVEIESGTVINFWVPSDETTAKRKSAVVFLHGFGFD 60
Query: 58 GILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117
GILTWQFQVLALA Y VYVPDFLFFG S+TD+ +R+ +FQAECMAKGLRK GVEKCTLV
Sbjct: 61 GILTWQFQVLALANKYAVYVPDFLFFGDSITDKSERSPAFQAECMAKGLRKHGVEKCTLV 120
Query: 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177
G+SYGGMVGFKMAEMYP+LV+SMV+TCSVM LT+S+S A L+RIG+ SW ++L+P+T
Sbjct: 121 GLSYGGMVGFKMAEMYPNLVDSMVITCSVMALTKSISRAGLQRIGFSSWAEYLIPETVKG 180
Query: 178 LKVQFDIACYKLPTLPAFVYKHILE 202
+K D+A YKLP +P F+YK ILE
Sbjct: 181 VKTLLDVAFYKLPWMPNFIYKDILE 205
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559396|ref|XP_003547985.1| PREDICTED: epoxide hydrolase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 195/312 (62%), Gaps = 46/312 (14%)
Query: 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTT----------------K 44
MVN++ +LLLHGL+ + G+ T+EIEPGT +N W+P +T
Sbjct: 1 MVNLVIAERLLLHGLMNMAGIRPYTVEIEPGTAMNFWIPSETITKPKKKDKKPRITAKPN 60
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
K AVVL+H F +GI+TWQFQV AL K Y VYVPD LFFG S T++P+R+ FQAEC+
Sbjct: 61 KPAVVLVHGFAAEGIMTWQFQVGALTKKYAVYVPDLLFFGGSATNKPNRSPRFQAECLVA 120
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164
GLRKLGVEKC +VG SYGGMV FKMAEMYP+LV +V++ S++ ++ES+S L+ +G
Sbjct: 121 GLRKLGVEKCVVVGFSYGGMVAFKMAEMYPELVLGLVISGSILAMSESLSTTLLQELGVS 180
Query: 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE---------------------- 202
S+ + LLP + LK F IA +K P + K LE
Sbjct: 181 SFSELLLPTSVKGLKALFSIAAHKKLRFPNRLLKDYLEVMFTNRKERSELLEGLVITNRD 240
Query: 203 --------KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254
+IHLLWGEND+IF +++A+++KEQ+G T E I+KAGHLV+LERP VYNR
Sbjct: 241 VTIPNFPQRIHLLWGENDRIFKLELAQSMKEQLGNGTTFEGIKKAGHLVHLERPCVYNRC 300
Query: 255 LKTILASLVHAN 266
LK I+AS + +N
Sbjct: 301 LKHIIASFLDSN 312
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 270 | ||||||
| TAIR|locus:2062126 | 313 | AT2G18360 "AT2G18360" [Arabido | 0.766 | 0.661 | 0.406 | 6e-48 | |
| TAIR|locus:2115435 | 317 | AT4G36610 [Arabidopsis thalian | 0.840 | 0.716 | 0.421 | 4.8e-46 | |
| TAIR|locus:2184777 | 311 | AT5G09430 [Arabidopsis thalian | 0.6 | 0.520 | 0.355 | 4.4e-36 | |
| TAIR|locus:505006573 | 328 | AT4G39955 [Arabidopsis thalian | 0.692 | 0.570 | 0.316 | 7.1e-34 | |
| TAIR|locus:2125909 | 307 | AT4G33180 [Arabidopsis thalian | 0.688 | 0.605 | 0.309 | 6.9e-32 | |
| TAIR|locus:2194744 | 314 | AT1G78210 [Arabidopsis thalian | 0.788 | 0.678 | 0.311 | 8.4e-26 | |
| TAIR|locus:2018856 | 332 | AT1G17430 [Arabidopsis thalian | 0.737 | 0.599 | 0.314 | 7.8e-23 | |
| UNIPROTKB|Q8IUS5 | 362 | EPHX4 "Epoxide hydrolase 4" [H | 0.351 | 0.262 | 0.284 | 2.2e-10 | |
| UNIPROTKB|J9P770 | 290 | EPHX4 "Uncharacterized protein | 0.351 | 0.327 | 0.284 | 1.5e-09 | |
| UNIPROTKB|F1N3G0 | 362 | EPHX4 "Uncharacterized protein | 0.351 | 0.262 | 0.284 | 3.8e-09 |
| TAIR|locus:2062126 AT2G18360 "AT2G18360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 424 (154.3 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 87/214 (40%), Positives = 135/214 (63%)
Query: 39 PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQ 98
P+K TK ++ +H F +GI+TWQFQV +LAK Y VY+PD LFFG S +D DR+ +FQ
Sbjct: 57 PQKPTKP-VLLFIHGFAAEGIVTWQFQVGSLAKKYSVYIPDLLFFGGSYSDNADRSPAFQ 115
Query: 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL 158
A C+ K LR LG+EK TLVG SYGGMV FK+AE YP++V++MVV+ S++ +T+++S + L
Sbjct: 116 AHCLVKSLRILGIEKFTLVGFSYGGMVAFKIAEEYPEMVQAMVVSGSILAMTDTISESNL 175
Query: 159 ERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ 218
++G++S D LLP + LK F +A +K P ++K +E + E ++ +
Sbjct: 176 NQLGFKSSADLLLPTSVKGLKTLFTLAVHKPMWFPKRLFKDFIEVMITNRKERAELLEAL 235
Query: 219 VARNLKEQVGQNATMESIEKAGHLVNLERPFVYN 252
V N ++ T+ ++ HL+ E ++N
Sbjct: 236 VISN------KDVTIPRFQQKIHLLWGESDQIFN 263
|
|
| TAIR|locus:2115435 AT4G36610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 102/242 (42%), Positives = 146/242 (60%)
Query: 1 MVNIITIYXXXXXXXXXXVGMTQRTIEIEPGTILNIWVPKKTTKKHA------------- 47
MVN + + G+ T+EIEPGT +N WVPK+T KK++
Sbjct: 1 MVNFVEVQKPLLYGLMKMAGVVPYTLEIEPGTKINFWVPKETLKKNSGTGKPTKPDKPKK 60
Query: 48 --VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
V+L+H F +GI+TWQFQV AL+K Y VY+PD LFFG S TD DR+ +FQA+C+ KG
Sbjct: 61 PVVLLIHGFAGEGIVTWQFQVGALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCLVKG 120
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES 165
LR LGV+K VG SYGGMV FK+AE YPD+V ++VV+ S+ +T++++ A+L R+G+ S
Sbjct: 121 LRILGVDKFVPVGFSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINEASLNRLGFSS 180
Query: 166 WVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225
D LLP + LK F IA +K P ++K +E + E ++ + V N +
Sbjct: 181 STDLLLPTSVTGLKALFTIAVHKPLWFPKRLFKDYIEVMFNNRKERAELLEAVVVSNKEA 240
Query: 226 QV 227
Q+
Sbjct: 241 QI 242
|
|
| TAIR|locus:2184777 AT5G09430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 277 (102.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 60/169 (35%), Positives = 96/169 (56%)
Query: 32 TILNIWVPKKTTK-KHAVVLLHPFGFDGILTWQF--QVLALAKTYEVYVPDFLFFGSSVT 88
T ++ W+PK + K ++LLH FG + + WQ+ + A + VYVPD LFFG S T
Sbjct: 46 TAMHCWIPKSPNRSKPNLLLLHGFGANAM--WQYGEHLRAFTGRFNVYVPDLLFFGLSST 103
Query: 89 DRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148
P+RT SFQA C+ + + GV++ +VG+SYGG VG+ +A +P+ VE +V+ C+ +
Sbjct: 104 SEPNRTESFQARCLMRLMEAHGVQRMNIVGISYGGFVGYSLAAQFPENVEKLVLCCAGVC 163
Query: 149 LTESVSNAALERI-GYESWVDFLLPKTADALKVQFDIACYK-LPTLPAF 195
L E L ++ E L+P+T + LK + K + +P+F
Sbjct: 164 LEEKDMEDGLFKVPNLEEATGILIPQTPEKLKELIRFSFVKPIKGVPSF 212
|
|
| TAIR|locus:505006573 AT4G39955 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 274 (101.5 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 61/193 (31%), Positives = 100/193 (51%)
Query: 20 GMTQRTIEIEPGTILNIWVP-KKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVP 78
G+ T ++ GT+ + W+P K ++LLH G + + W + + VYVP
Sbjct: 23 GLRSSTSDLGDGTVFHCWIPLTHIHTKPTLLLLHGIGANAMWQWDRFIDRFIPRFNVYVP 82
Query: 79 DFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVE 138
D +FFG S T RPDR+ SFQA C+ K + GV T+ G+SYGG V + +A + + V+
Sbjct: 83 DLIFFGDSYTTRPDRSESFQATCVMKAMDAYGVRTMTVAGLSYGGFVAYSLAAQFKERVD 142
Query: 139 SMVVTCSVMGLTESVSNAALERI-GYESWVDFLLPKTADALKVQFDIACYKLPT-LP--- 193
+V+ C+ + L E S + ++ E L P++ L+ ++ YK P +P
Sbjct: 143 RVVLICAGVALEEKDSEDGMFKVKSPEEAAAVLFPQSPSMLRRLLQLSFYKPPIWIPSCF 202
Query: 194 AFVYKHILEKIHL 206
A Y H++ K +L
Sbjct: 203 AMDYIHVMCKDYL 215
|
|
| TAIR|locus:2125909 AT4G33180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 277 (102.6 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 60/194 (30%), Positives = 106/194 (54%)
Query: 20 GMTQRTIEIEPGTILNIWVP-----KKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-Y 73
G+T +T+ I+ T ++ W P + + ++LLH FG + W+ Q+ A + + +
Sbjct: 25 GLTSQTLSIDSETTIHFWGPPPLDHRSDDDRPVMLLLHGFGPSSMWQWRRQMQAFSPSAF 84
Query: 74 EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133
VY PD +FFG S + +RT FQAECMAK + K+G+ K + G SYGG V + MA+M+
Sbjct: 85 RVYSPDLVFFGDSTSSSTNRTEVFQAECMAKLMAKIGIGKYNVAGTSYGGFVAYHMAKMW 144
Query: 134 PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC-YKLPTL 192
P+ VE +V+ S + + + + L+R E +LP TA + +A ++L +
Sbjct: 145 PEKVEKVVIASSGINMRKCDGESLLQRSNCECIEKVMLPSTATEFRTLMALASSWRLVRM 204
Query: 193 -PAFVYKHILEKIH 205
P ++ ++ ++
Sbjct: 205 FPDALWNDVINNLY 218
|
|
| TAIR|locus:2194744 AT1G78210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 70/225 (31%), Positives = 118/225 (52%)
Query: 20 GMTQRTIEIEPGTILNIWVPK---KTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVY 76
G+ TI+++ GT++N WV K ++ K ++L+H G I W L++ + +Y
Sbjct: 23 GLRPVTIDLKDGTVVNFWVSKTKPESKPKPNLLLIHGLGATAIWQWYDVARRLSRYFNLY 82
Query: 77 VPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDL 136
+PD +FFG S T RP+R+ FQA+ + + L V+K +LVG+SYGG VG++MA MY D
Sbjct: 83 IPDLVFFGGSSTTRPERSDIFQAQTLMRALEAQSVKKFSLVGLSYGGFVGYRMASMYADA 142
Query: 137 VESMVVTCSVMGLTESVSNAALERIG-YESWVDFLLPKTADALKVQFDIACYKLPTLPAF 195
VE +V+ C+ + + E A + ++ + L+P++ L+ YK P L
Sbjct: 143 VEKVVICCAAVCVEEKDMKAGVFKVSDLDEASKILVPESVKKLRELMGYIFYK-PALARL 201
Query: 196 VYKHILEKI--HLLWGENDKIFDMQVARNLKEQVGQNATMESIEK 238
V +L H L +N M+ R L + + ++ + I K
Sbjct: 202 VPTCLLHDFIEHALTRDN-----MEEKRELIKAIPKDRIISEIPK 241
|
|
| TAIR|locus:2018856 AT1G17430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 66/210 (31%), Positives = 117/210 (55%)
Query: 25 TIEIEPG-TILNIWVP-KKTTKKHAVVLLHPFGFDGILTWQF--QVLALAKTYEVYVPDF 80
T++++ G T ++ W+ + + +V+LH G+ G WQF QV L+K++ +++PD
Sbjct: 56 TVDLDDGETTVHFWISGHRRISRQNLVMLH--GYGGNSKWQFVHQVSDLSKSFNLFIPDL 113
Query: 81 LFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEK---CTLVGVSYGGMVGFKMAEMYPDL 136
+FFG S + DR+ QA + GL+KLG VE ++ +SYGG V +KMAE++P +
Sbjct: 114 VFFGKSYSKNRDRSVEIQARSVVGGLKKLGCVEGGGGISIYSISYGGFVAYKMAEIWPAM 173
Query: 137 VESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFV 196
VE +V+ S +G T+ A L++ G + L+PKT L++ I+ T +V
Sbjct: 174 VEKLVIVSSGVGFTQQQKTAELKKHGGDC-SKILVPKTPMDLRLLIKISMNTGLTFVDWV 232
Query: 197 YKHILEKIHLLWGENDKIFDMQVARNLKEQ 226
L + + E ++ +++A+NL E+
Sbjct: 233 PDFFLSQFIAVMYEKNRQELLELAKNLLER 262
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| UNIPROTKB|Q8IUS5 EPHX4 "Epoxide hydrolase 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 130 (50.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
K ++LLH F + +W++Q+ Y V D +G TD P +++ +C+
Sbjct: 93 KPLMLLLHGFP-EFWYSWRYQLREFKSEYRVVALDLRGYGE--TDAPIHRQNYKLDCLIT 149
Query: 105 GLR----KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
++ LG KC L+G +GGM+ + +A YP++V ++V
Sbjct: 150 DIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV 191
|
|
| UNIPROTKB|J9P770 EPHX4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 126 (49.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
K ++LLH F + +W+ Q+ Y V D +G TD P +++ +C+
Sbjct: 21 KPLMLLLHGFP-EFWYSWRHQLREFKSEYRVVALDLRGYGE--TDAPIHRENYKLDCLIT 77
Query: 105 GLR----KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
++ LG KC L+G +GGM+ + +A YP++V ++V
Sbjct: 78 DIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV 119
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| UNIPROTKB|F1N3G0 EPHX4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
K ++LLH F + +W+ Q+ Y V D +G S D P +++ +C+
Sbjct: 93 KPLMLLLHGFP-EFWYSWRHQLREFKSEYRVVALDLRGYGES--DAPVHRENYKLDCLIT 149
Query: 105 GLR----KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
++ LG KC L+G +GGM+ + +A YP++V ++V
Sbjct: 150 DIKDILESLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV 191
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.1.10 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | fgenesh4_pm.C_LG_IX000250 | hypothetical protein (302 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 270 | |||
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 3e-27 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 4e-23 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 5e-14 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-12 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 4e-12 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 1e-09 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 7e-08 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 6e-07 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 1e-06 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 3e-06 | |
| PRK08775 | 343 | PRK08775, PRK08775, homoserine O-acetyltransferase | 9e-05 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 2e-04 | |
| COG2021 | 368 | COG2021, MET2, Homoserine acetyltransferase [Amino | 0.002 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 0.002 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 0.004 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 3e-27
Identities = 56/202 (27%), Positives = 80/202 (39%), Gaps = 22/202 (10%)
Query: 48 VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFG-SSVTDRPDRTASFQAECMAKGL 106
VVLLH G +W+ ALA Y V PD G S R + A +A L
Sbjct: 1 VVLLHGAGGSA-ESWRPLAEALAAGYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALL 59
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166
LG+ LVG S GG V A P+ V +V+ + E + A
Sbjct: 60 DALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEELLAADAAA-----L 114
Query: 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQ 226
+ L DA ++ +A +P L ++ GE+D + + AR L E
Sbjct: 115 LALLRAALLDAD-LREALARLTVPVL-------------VIHGEDDPLVPPEAARRLAEA 160
Query: 227 VGQNATMESIEKAGHLVNLERP 248
+ A + + AGHL +LE P
Sbjct: 161 LP-GAELVVLPGAGHLPHLEHP 181
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 95.1 bits (235), Expect = 4e-23
Identities = 61/264 (23%), Positives = 86/264 (32%), Gaps = 48/264 (18%)
Query: 45 KHAVVLLHPFGFDG-ILTWQFQVLA-LAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECM 102
+VLLH F + F+VL LA Y V PD G S D + S A+ +
Sbjct: 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRS--DPAGYSLSAYADDL 78
Query: 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162
A L LG+EK LVG S GG V +A +PD V +V+ +
Sbjct: 79 AALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGA 138
Query: 163 YESWVDFLLPKTADALKVQ----------------------------------------F 182
L DA
Sbjct: 139 APLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAAR 198
Query: 183 DIACYKLPTLPAFVYKHILEKI----HLLWGENDKIFDMQVARNLKEQVGQNATMESIEK 238
L L + L +I ++ GE+D + ++AR L + +A + I
Sbjct: 199 ADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPG 258
Query: 239 AGHLVNLERPFVYNRQLKTILASL 262
AGH +LE P + L L L
Sbjct: 259 AGHFPHLEAPEAFAAALLAFLERL 282
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Length = 282 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 69.5 bits (171), Expect = 5e-14
Identities = 58/257 (22%), Positives = 91/257 (35%), Gaps = 55/257 (21%)
Query: 48 VVLLHPFGFDGIL-TWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAEC---MA 103
+V LH GF G WQ + L + D GSS + F+ +A
Sbjct: 5 LVFLH--GFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPSDIERYDFEEIAQLLLA 62
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-G 162
L +LG+E LVG S GG + A YP+ V+ +++ GL R
Sbjct: 63 TLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLAT--EEERAARRQN 120
Query: 163 YESWVDFLLPKTADALKVQFDIACYKLP------TLPAFVYKHILEK------------- 203
E + +A F Y+ P LP + + K
Sbjct: 121 DEQLAQRFEQEGIEA----FLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKML 176
Query: 204 ---------------------IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHL 242
+ L GE D+ F +Q+A+ +++ + N T+ I AGH
Sbjct: 177 RATGLGKQPSLWPKLQALKIPVLYLCGEKDEKF-VQIAKEMQKLI-PNLTLVIIANAGHN 234
Query: 243 VNLERPFVYNRQLKTIL 259
++LE P + + L L
Sbjct: 235 IHLENPEAFAKILLAFL 251
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This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 3e-12
Identities = 49/226 (21%), Positives = 75/226 (33%), Gaps = 59/226 (26%)
Query: 73 YEVYVPDFLFFGSS---VTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKM 129
++V D FG S R AE + L LG++K LVG S GG++
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDL-AEDLEALLDALGLDKVNLVGHSMGGLIALAY 59
Query: 130 AEMYPDLVESMVVTCSVMGLTESVSNAALER--IGYESWVDFLLPKTADALKVQFD---- 183
A YPD V+++V L +V A L + + LL + L +
Sbjct: 60 AAKYPDRVKALV-------LVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLG 112
Query: 184 -----IACYKLPTLPAFVY------------------------------------KHILE 202
P + F+ K I
Sbjct: 113 RAIKQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDV 172
Query: 203 KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248
++WG++D + + L NA + I+ AGHL LE+P
Sbjct: 173 PTLIIWGDDDPLVPPDASEKLAALFP-NAQLVVIDDAGHLAQLEKP 217
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This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 4e-12
Identities = 66/275 (24%), Positives = 98/275 (35%), Gaps = 43/275 (15%)
Query: 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVP 78
G R I T+ ++ VVL+H FG D + W F ALA V
Sbjct: 107 AGPAPRKARIGGRTV--RYLRLGEGDGTPVVLIHGFGGD-LNNWLFNHAALAAGRPVIAL 163
Query: 79 DFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVE 138
D G+S + A + L LG+E+ LVG S GG V ++A P V
Sbjct: 164 DLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVA 223
Query: 139 SMVVTCSVMGLTESVSNAALER-IGYES------WVDFLLPKTADALKV--QF--DIACY 187
S+ + GL ++ ++ + ES ++ L AD V Q D+ Y
Sbjct: 224 SLTLIAPA-GLGPEINGDYIDGFVAAESRRELKPVLELLF---ADPALVTRQMVEDLLKY 279
Query: 188 K--------LPTL---------PAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQ 226
K L L + L + ++WGE D+I A+ L
Sbjct: 280 KRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL--- 336
Query: 227 VGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261
+ + AGH+ +E NR L L
Sbjct: 337 -PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370
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Length = 371 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-09
Identities = 42/196 (21%), Positives = 61/196 (31%), Gaps = 53/196 (27%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
VVLLH G D + ALA Y V D+ G+S + A+
Sbjct: 1 LVVLLHGAGGD-PEAYAPLARALASRGYNVVAVDYPGHGAS--LGAPDAEAVLAD----- 52
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES 165
L E+ LVG S GG V +A P + ++V+
Sbjct: 53 -APLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALD------------- 98
Query: 166 WVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225
D+A +P L ++ G D + + A L
Sbjct: 99 -----------------DLAKLTVPVL-------------IIHGTRDGVVPPEEAEALAA 128
Query: 226 QVGQNATMESIEKAGH 241
+ A + IE AGH
Sbjct: 129 ALPGPAELVVIEGAGH 144
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 7e-08
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 48 VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107
+VL+H FG W++ + LAK Y+VY D L FG S + A + +A ++
Sbjct: 89 IVLIHGFG-ASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVK 147
Query: 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
++ E LVG S GG A YP+LV + +
Sbjct: 148 EVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVAL 182
|
Length = 354 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 6e-07
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 37/225 (16%)
Query: 62 WQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR-TASFQAECMAKGLRKLGVEKCTLVGVS 120
W Q+ L + + V D G S + P + + A+ + + L LG+E+ VG +
Sbjct: 28 WAPQLAVLTQRFHVVTYDHRGTGRSPGELPPDYSIAHMADDVLQLLDALGIERFHFVGHA 87
Query: 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTE---------SVSNAALERIGYESWVD--- 168
GG++G ++A YP+ + S+V+ + G + V A L G E++V
Sbjct: 88 LGGLIGLQLALDYPERLTSLVL---INGWSRPDPHTRRCFDVRIALLYHAGPEAYVHAQP 144
Query: 169 -FLLPK---TADALKVQFDIA------------CYKLPTLPAFVYKHILEKIH----LLW 208
FL P + +A ++ D A ++ L AF L++I L+
Sbjct: 145 LFLYPADWISENAPRLAADEAHALAHFPGKNNVLRRINALEAFDVSARLDRIRHPVLLIA 204
Query: 209 GENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253
+D + + L + NA ++ + GH N+ P +NR
Sbjct: 205 ARDDMLVPYTCSLRLAAAL-PNAQLKLLPYGGHASNVTDPETFNR 248
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 48 VVLLHPFGFDGILTWQF------QVLALAKTYEVYVPDFLFFGSS--VTDRPDRTASFQA 99
V+LLH G +W + +LA A + V PD + FG S T R D T +
Sbjct: 49 VLLLH-----GEPSWSYLYRKMIPILA-AAGHRVIAPDLIGFGRSDKPTRREDYTYARHV 102
Query: 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
E M +L + TLV +GG++G ++A +PD +VV
Sbjct: 103 EWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVV 145
|
Length = 302 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 3e-06
Identities = 48/229 (20%), Positives = 86/229 (37%), Gaps = 36/229 (15%)
Query: 62 WQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY 121
W + AL + V D G S + A+ + L LG+E+ G+S
Sbjct: 29 WDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSL 88
Query: 122 GGMVGFKMAEMYPDLVESMVVTCSV--MGLTE---------------SVSNAALERIGYE 164
GG++ +A PD V ++V++ + +G E ++++A LER
Sbjct: 89 GGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLER---- 144
Query: 165 SWV--DFLLPKTAD-----ALKVQFDIACYKL--PTLPAFVYKHILEKIHL----LWGEN 211
W F A + V+ Y + ++ L I + + G+
Sbjct: 145 -WFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQ 203
Query: 212 DKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260
D ++ R + + V A I AGH+ +E+P +N L+ L
Sbjct: 204 DGSTPPELVREIADLV-PGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|181553 PRK08775, PRK08775, homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 9e-05
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 63 QFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKC-TLVGVSY 121
+F++LA DF+ S+ D P TA QA+ +A L LG+ + VG SY
Sbjct: 99 RFRLLAF---------DFIGADGSL-DVPIDTAD-QADAIALLLDALGIARLHAFVGYSY 147
Query: 122 GGMVGFKMAEMYPDLVESMVV 142
G +VG + A +P V ++VV
Sbjct: 148 GALVGLQFASRHPARVRTLVV 168
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Length = 343 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 2e-04
Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
+VL+H +G + + ++ L+ + +++ D G S P A+ +
Sbjct: 6 HLVLIHGWGMNAEV-FRCLDEELSAHFTLHLVDLPGHGRSRGFGP-----LSLADAAEAI 59
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145
+ +G S GG+V +A +PD V ++V S
Sbjct: 60 AAQAPDPAIWLGWSLGGLVALHIAATHPDRVRALVTVAS 98
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|224932 COG2021, MET2, Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 98 QAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145
L LG++K +VG S GGM + A YPD V + +
Sbjct: 132 MVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180
|
Length = 368 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 39 PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR---TA 95
P+ T+ V+L+H FG I W+ + LAK Y VY D L FG+S D+P T
Sbjct: 82 PEVTSSGPPVLLVHGFG-ASIPHWRRNIGVLAKNYTVYAIDLLGFGAS--DKPPGFSYTM 138
Query: 96 SFQAECMAKGLRKLGVEKCT-LVGVSYGGMVG-FKMAEMYPDLVESMVV 142
AE + L ++ V+K T L+G S G + +E DLV +V+
Sbjct: 139 ETWAELILDFLEEV-VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVL 186
|
Length = 360 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 37.6 bits (87), Expect = 0.004
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 23/135 (17%)
Query: 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFD-GILTWQFQVLALAKTYEVYVPDFLF 82
R+ EP I + K +V++H +G G F ALA + V D L
Sbjct: 85 RSASNEPRFINTVTFDSKEDAP-TLVMVHGYGASQGFFFRNFD--ALASRFRVIAIDQLG 141
Query: 83 FGSSVTDRPDRTA------------SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130
+G S RPD T SF+ AK L L+G S+GG V K A
Sbjct: 142 WGGS--SRPDFTCKSTEETEAWFIDSFEEWRKAKNL-----SNFILLGHSFGGYVAAKYA 194
Query: 131 EMYPDLVESMVVTCS 145
+P+ V+ +++
Sbjct: 195 LKHPEHVQHLILVGP 209
|
Length = 402 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 270 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 100.0 | |
| PRK07581 | 339 | hypothetical protein; Validated | 100.0 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 100.0 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.98 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.98 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.98 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.98 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.98 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.97 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.97 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.97 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.97 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.97 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.96 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.96 | |
| PLN02511 | 388 | hydrolase | 99.96 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.96 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.96 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.95 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.95 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.95 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.94 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.94 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.93 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.93 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.93 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.93 | |
| PRK10566 | 249 | esterase; Provisional | 99.92 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.92 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.91 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.91 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.9 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.9 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.88 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.87 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.86 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.86 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.86 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.85 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.85 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.85 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.85 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.85 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.85 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.85 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.84 | |
| PLN00021 | 313 | chlorophyllase | 99.83 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.82 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.82 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.81 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.81 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.8 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.8 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.78 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.78 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.77 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.77 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.76 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.75 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.75 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.75 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.72 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.72 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.71 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.7 | |
| PRK10115 | 686 | protease 2; Provisional | 99.69 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.69 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.68 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.68 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.66 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.65 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.61 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.61 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.6 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.6 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.59 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.58 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.58 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.54 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.53 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.52 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.52 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.51 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.51 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.5 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.47 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.47 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.46 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.46 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.45 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.44 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.44 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.43 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.42 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.42 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.41 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.39 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.39 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.38 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.35 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.35 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.34 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.33 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.32 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.31 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.31 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.29 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.27 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 99.24 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.22 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.14 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.12 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.11 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.11 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 99.08 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 99.03 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.01 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 99.0 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.98 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.98 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.98 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.98 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.96 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.94 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.88 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.87 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 98.86 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.85 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.84 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.82 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.78 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.76 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.71 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.68 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.68 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.66 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.63 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.58 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.57 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.56 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.55 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.54 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.53 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.51 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.51 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.51 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.49 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.45 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.45 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.41 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.37 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.35 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.29 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.29 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 98.25 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 98.22 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.19 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 98.13 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 98.11 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.05 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.04 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 97.94 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.93 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 97.92 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 97.86 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.85 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.82 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.76 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.76 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.74 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.63 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 97.56 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 97.54 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.46 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.41 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.35 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.34 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.26 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.14 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.14 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.14 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 97.06 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.06 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 97.01 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 96.98 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.98 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.82 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.76 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.62 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.61 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.6 | |
| PLN02408 | 365 | phospholipase A1 | 96.38 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.35 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 96.34 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 96.32 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.26 | |
| PLN02934 | 515 | triacylglycerol lipase | 96.08 | |
| PLN02310 | 405 | triacylglycerol lipase | 96.05 | |
| PLN02324 | 415 | triacylglycerol lipase | 96.04 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 96.02 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.83 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.69 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.56 | |
| PLN02719 | 518 | triacylglycerol lipase | 95.51 | |
| PLN02761 | 527 | lipase class 3 family protein | 95.44 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 95.3 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 95.26 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 95.24 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 95.11 | |
| PLN02847 | 633 | triacylglycerol lipase | 94.38 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 94.15 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 92.99 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 92.99 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 92.01 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 90.04 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 89.13 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 88.58 | |
| COG1448 | 396 | TyrB Aspartate/tyrosine/aromatic aminotransferase | 84.09 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 83.61 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 83.34 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=239.67 Aligned_cols=239 Identities=19% Similarity=0.217 Sum_probs=176.3
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-------C
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-------P 91 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-------~ 91 (270)
+.++.++++. +|.+++|...|+ ++++|||+||+++++. .|..+++.|+++|+|+++|+||||.|+.+. .
T Consensus 6 ~~~~~~~~~~-~~~~i~y~~~G~--~~~~vlllHG~~~~~~-~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~ 81 (294)
T PLN02824 6 PQVETRTWRW-KGYNIRYQRAGT--SGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNS 81 (294)
T ss_pred CCCCCceEEE-cCeEEEEEEcCC--CCCeEEEECCCCCChh-HHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccc
Confidence 4566778888 699999988774 3589999999999999 999999999988999999999999998653 2
Q ss_pred CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC-----chhhhH----hhhhcc
Q 024228 92 DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT-----ESVSNA----ALERIG 162 (270)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~-----~~~~~~----~~~~~~ 162 (270)
.++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++..... ...... ......
T Consensus 82 ~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
T PLN02824 82 FYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLR 161 (294)
T ss_pred cCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999764211 000000 000000
Q ss_pred ---c-hh----------hhhh----cccc---cHHHHHHH-------------HHhhhhcCCCChhhhhhhhheeeeEEE
Q 024228 163 ---Y-ES----------WVDF----LLPK---TADALKVQ-------------FDIACYKLPTLPAFVYKHILEKIHLLW 208 (270)
Q Consensus 163 ---~-~~----------~~~~----~~~~---~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~P~l~i~ 208 (270)
. .. .... .... ........ ...............+.++.+|+|+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 241 (294)
T PLN02824 162 ETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAW 241 (294)
T ss_pred chhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEE
Confidence 0 00 0000 0000 00000000 000000111112344566679999999
Q ss_pred cCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 209 GENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 209 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
|++|.++|.+.++.+.+..+ +.++++++++||+++.|+|+++++.|.+|++++
T Consensus 242 G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 242 GEKDPWEPVELGRAYANFDA-VEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred ecCCCCCChHHHHHHHhcCC-ccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 99999999999988777665 789999999999999999999999999999753
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=234.20 Aligned_cols=238 Identities=20% Similarity=0.192 Sum_probs=175.1
Q ss_pred EEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+++++ +|.+++|+..+..+++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|+.+...++.+.+++++.
T Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~plvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 5 RTIDL-DGQSIRTAVRPGKEGLTPLLIFNGIGANLE-LVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred EEecc-CCcEEEEEEecCCCCCCcEEEEeCCCcchH-HHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 45666 788999977543234589999999999999 9999999998889999999999999987666688999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc--hhhhH---hhhhccc-------hhhhhhcc
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE--SVSNA---ALERIGY-------ESWVDFLL 171 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~--~~~~~---~~~~~~~-------~~~~~~~~ 171 (270)
+++++++.++++|+||||||.+++.+|.++|++|+++|+++++..... ..... ....... ........
T Consensus 83 ~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 83 RMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred HHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcc
Confidence 999999999999999999999999999999999999999998764211 00000 0000000 00000000
Q ss_pred c---ccHHHHHHHHH------------hhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEe
Q 024228 172 P---KTADALKVQFD------------IACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESI 236 (270)
Q Consensus 172 ~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
. ........... .......+.....+.++.+|+|+++|++|+++|++..+.+.+.++ +.+++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~-~~~~~~i 241 (276)
T TIGR02240 163 GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP-NAELHII 241 (276)
T ss_pred ceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC-CCEEEEE
Confidence 0 00000000000 000000111223355667999999999999999999999999998 8999999
Q ss_pred cCCCcceeecchHhHHHHHHHHHHhhhhh
Q 024228 237 EKAGHLVNLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 237 ~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
++ ||+++.++|+++++.|.+|+++....
T Consensus 242 ~~-gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 242 DD-GHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred cC-CCchhhccHHHHHHHHHHHHHHhhhh
Confidence 85 99999999999999999999987654
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=232.06 Aligned_cols=239 Identities=17% Similarity=0.181 Sum_probs=171.9
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
.++...+++ +|.+++|...+. +++|||+||++++.. .|..+++.|++.++|+++|+||||.|+.+...++.+.++
T Consensus 6 ~~~~~~~~~-~g~~i~y~~~G~---g~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a 80 (295)
T PRK03592 6 PGEMRRVEV-LGSRMAYIETGE---GDPIVFLHGNPTSSY-LWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHA 80 (295)
T ss_pred CCcceEEEE-CCEEEEEEEeCC---CCEEEEECCCCCCHH-HHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHH
Confidence 345666777 799999988774 689999999999999 999999999988999999999999999877678999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch--hh---hHhhhhccch----------
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES--VS---NAALERIGYE---------- 164 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~--~~---~~~~~~~~~~---------- 164 (270)
+|+.+++++++.++++++|||+||.+|+.+|.++|++|+++|++++....... .. ......+...
T Consensus 81 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (295)
T PRK03592 81 RYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEE 160 (295)
T ss_pred HHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccch
Confidence 99999999999999999999999999999999999999999999974322110 00 0000000000
Q ss_pred -hhhhhcccc------cHHHHHHHHHh-----------hhhcC----CCC---------hhhhhhhhheeeeEEEcCCCc
Q 024228 165 -SWVDFLLPK------TADALKVQFDI-----------ACYKL----PTL---------PAFVYKHILEKIHLLWGENDK 213 (270)
Q Consensus 165 -~~~~~~~~~------~~~~~~~~~~~-----------~~~~~----~~~---------~~~~~~~~~~P~l~i~g~~D~ 213 (270)
......... .......+... ..... ... ....+.++.+|+|+|+|++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 240 (295)
T PRK03592 161 NVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGA 240 (295)
T ss_pred hhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCc
Confidence 000000000 00000000000 00000 000 011234456999999999999
Q ss_pred cCCHHHHHHHH-HHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 214 IFDMQVARNLK-EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
++++....++. +..+ +.++++++++||+++.++|+++++.|.+|+++...
T Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 241 ILTTGAIRDWCRSWPN-QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred ccCcHHHHHHHHHhhh-hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 99555554554 4455 89999999999999999999999999999987654
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=226.22 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=167.8
Q ss_pred ceeEEEeecCC-----eEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC--CC
Q 024228 21 MTQRTIEIEPG-----TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PD 92 (270)
Q Consensus 21 ~~~~~i~~~~g-----~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~ 92 (270)
+..+++.+. + .+++|...+.. .+|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+. ..
T Consensus 19 ~~~~~~~~~-~~~~~~~~i~y~~~G~~-~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~ 95 (302)
T PRK00870 19 FAPHYVDVD-DGDGGPLRMHYVDEGPA-DGPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRRED 95 (302)
T ss_pred CCceeEeec-CCCCceEEEEEEecCCC-CCCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCccc
Confidence 355667774 4 67888877653 4689999999999999 999999999865 999999999999998654 34
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch--h--hhHhhhhcc------
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES--V--SNAALERIG------ 162 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~--~--~~~~~~~~~------ 162 (270)
++.+.+++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++....... . .........
T Consensus 96 ~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (302)
T PRK00870 96 YTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLP 175 (302)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhh
Confidence 789999999999999999999999999999999999999999999999999875322110 0 000000000
Q ss_pred chhhhh-hcccc-cHHHHHHHH------------Hhh-hhc-CC-----C-Ch---hhhhhhhheeeeEEEcCCCccCCH
Q 024228 163 YESWVD-FLLPK-TADALKVQF------------DIA-CYK-LP-----T-LP---AFVYKHILEKIHLLWGENDKIFDM 217 (270)
Q Consensus 163 ~~~~~~-~~~~~-~~~~~~~~~------------~~~-~~~-~~-----~-~~---~~~~~~~~~P~l~i~g~~D~~~~~ 217 (270)
...... ..... ......... ... ... .. . .. ...+.++.+|+++|+|++|.++|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 255 (302)
T PRK00870 176 VGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGG 255 (302)
T ss_pred HHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccC
Confidence 000000 00000 000000000 000 000 00 0 00 012345569999999999999997
Q ss_pred HHHHHHHHHhcCCce---EEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 218 QVARNLKEQVGQNAT---MESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 218 ~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.. +.+.+.++ +.+ +.+++++||++++++|+++++.|.+|++++
T Consensus 256 ~~-~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 256 GD-AILQKRIP-GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred ch-HHHHhhcc-cccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 66 78888887 554 889999999999999999999999999764
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=227.35 Aligned_cols=238 Identities=24% Similarity=0.283 Sum_probs=166.9
Q ss_pred eEEEeecCCe-EEEEEecCCC---CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-CCCChHH
Q 024228 23 QRTIEIEPGT-ILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASF 97 (270)
Q Consensus 23 ~~~i~~~~g~-~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~~~~~~~ 97 (270)
.+++.. +|. +++|...|+. +.+|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+. ..++.+.
T Consensus 63 ~~~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 140 (360)
T PLN02679 63 CKKWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMET 140 (360)
T ss_pred CceEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHH
Confidence 344555 355 8999877752 13589999999999999 999999999888999999999999998764 3578899
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCchh-----hhHh-------h------
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTESV-----SNAA-------L------ 158 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~~~-----~~~~-------~------ 158 (270)
+++++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++........ .... .
T Consensus 141 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PLN02679 141 WAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ 220 (360)
T ss_pred HHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc
Confidence 99999999999999999999999999999988874 799999999999764321100 0000 0
Q ss_pred --------hhccchh-hh----hhccc-cc-HHHHHHH--------------HHhhhhcCCCChhhhhhhhheeeeEEEc
Q 024228 159 --------ERIGYES-WV----DFLLP-KT-ADALKVQ--------------FDIACYKLPTLPAFVYKHILEKIHLLWG 209 (270)
Q Consensus 159 --------~~~~~~~-~~----~~~~~-~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~P~l~i~g 209 (270)
....... .. ..... .. ....... ...............+.++.+|+|+++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G 300 (360)
T PLN02679 221 RGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWG 300 (360)
T ss_pred hhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEe
Confidence 0000000 00 00000 00 0000000 0000000011122345566699999999
Q ss_pred CCCccCCHHH-----HHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 210 ENDKIFDMQV-----ARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 210 ~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++|.++|++. .+.+.+.++ +.++++++++||+++.|+|+++++.|.+||++..
T Consensus 301 ~~D~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 301 DQDPFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred CCCCCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 9999998763 234555666 8999999999999999999999999999998754
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=217.72 Aligned_cols=233 Identities=15% Similarity=0.200 Sum_probs=165.8
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQA 99 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~ 99 (270)
++...+++ +|.+++|...+. +++|||+||++.+.. .|..+.+.|.++|+|+++|+||||.|+.+.. .++.++++
T Consensus 14 ~~~~~~~~-~~~~i~y~~~G~---~~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 88 (286)
T PRK03204 14 FESRWFDS-SRGRIHYIDEGT---GPPILLCHGNPTWSF-LYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHA 88 (286)
T ss_pred ccceEEEc-CCcEEEEEECCC---CCEEEEECCCCccHH-HHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHH
Confidence 56677888 688999987764 689999999998887 8999999999889999999999999986543 47889999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh----hhh------cc-chhhhh
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA----LER------IG-YESWVD 168 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~----~~~------~~-~~~~~~ 168 (270)
+++.+++++++.++++++||||||.+++.++..+|++|+++|++++............ ... .. ......
T Consensus 89 ~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (286)
T PRK03204 89 RVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVE 168 (286)
T ss_pred HHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999999999877542211100000 000 00 000000
Q ss_pred hcc------cccHHHHHHH------------HHh--hhhcCCC-Chhhh---hhh--hheeeeEEEcCCCccCCHH-HHH
Q 024228 169 FLL------PKTADALKVQ------------FDI--ACYKLPT-LPAFV---YKH--ILEKIHLLWGENDKIFDMQ-VAR 221 (270)
Q Consensus 169 ~~~------~~~~~~~~~~------------~~~--~~~~~~~-~~~~~---~~~--~~~P~l~i~g~~D~~~~~~-~~~ 221 (270)
.+. .......... ... ....... ..... ... ..+|+++|+|++|.++++. ..+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~ 248 (286)
T PRK03204 169 RLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILP 248 (286)
T ss_pred HhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHH
Confidence 000 0000000000 000 0000000 00000 000 1599999999999988654 568
Q ss_pred HHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 222 NLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
.+.+.++ +.++++++++||++++|+|+++++.|.+||
T Consensus 249 ~~~~~ip-~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 249 RLRATFP-DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHhcC-CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 8888888 899999999999999999999999999997
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=215.28 Aligned_cols=215 Identities=17% Similarity=0.116 Sum_probs=155.4
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChHHHHHHHHHHHHHhCC-CceEEEEEchh
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLRKLGV-EKCTLVGVSYG 122 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~G 122 (270)
.+|||+||++.+.. .|..+++.|.+. |+|+++|+||||.|+.... .++.+.+++|+.++++.++. ++++|+|||||
T Consensus 4 ~~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmG 82 (255)
T PLN02965 4 IHFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIG 82 (255)
T ss_pred eEEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcc
Confidence 35999999999998 999999999655 9999999999999986543 57899999999999999987 49999999999
Q ss_pred HHHHHHHHhhCccccccEEEecccCCCCchh-hhHh---hhh----ccc--hh--------------hh-hhc-ccccHH
Q 024228 123 GMVGFKMAEMYPDLVESMVVTCSVMGLTESV-SNAA---LER----IGY--ES--------------WV-DFL-LPKTAD 176 (270)
Q Consensus 123 g~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-~~~~---~~~----~~~--~~--------------~~-~~~-~~~~~~ 176 (270)
|.+++.+|.++|++|+++|++++........ .... ... ... .. .. ... ......
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLE 162 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHH
Confidence 9999999999999999999999863211100 0000 000 000 00 00 000 000000
Q ss_pred HHHHHHHhhhhcCCCC----h---hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchH
Q 024228 177 ALKVQFDIACYKLPTL----P---AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 177 ~~~~~~~~~~~~~~~~----~---~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 249 (270)
... ............ . ......+.+|+++++|++|..+|++..+.+.+.++ ++++++++++||+++.|+|+
T Consensus 163 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-~a~~~~i~~~GH~~~~e~p~ 240 (255)
T PLN02965 163 DYT-LSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-PAQTYVLEDSDHSAFFSVPT 240 (255)
T ss_pred HHH-HHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-cceEEEecCCCCchhhcCHH
Confidence 000 000000000000 0 11223456999999999999999999999999998 89999999999999999999
Q ss_pred hHHHHHHHHHHhhh
Q 024228 250 VYNRQLKTILASLV 263 (270)
Q Consensus 250 ~~~~~i~~fl~~~~ 263 (270)
++++.|.+|++.+.
T Consensus 241 ~v~~~l~~~~~~~~ 254 (255)
T PLN02965 241 TLFQYLLQAVSSLQ 254 (255)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988753
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=209.73 Aligned_cols=243 Identities=21% Similarity=0.324 Sum_probs=177.1
Q ss_pred ccCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC--CC
Q 024228 17 KLVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP--DR 93 (270)
Q Consensus 17 ~~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~ 93 (270)
...+++..+++. +|.+++|.+.+. .++|.|+++||++.... .|+.+...|+.. |+|+++|+||+|.|+.+.. .+
T Consensus 18 ~~~~~~hk~~~~-~gI~~h~~e~g~-~~gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Y 94 (322)
T KOG4178|consen 18 NLSAISHKFVTY-KGIRLHYVEGGP-GDGPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEY 94 (322)
T ss_pred ChhhcceeeEEE-ccEEEEEEeecC-CCCCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCccee
Confidence 445678888888 589999887765 67899999999999999 999999999999 9999999999999998775 49
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh-------------hh
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL-------------ER 160 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~-------------~~ 160 (270)
+...++.|+..++++++.++++++||+|||.+|+.+|..+|++|+++|.++.....+........ +.
T Consensus 95 t~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~ 174 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQE 174 (322)
T ss_pred eHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccc
Confidence 99999999999999999999999999999999999999999999999999877651110000000 00
Q ss_pred c----------cchhhhhh----------ccc---------ccHHHHHHHHHhh----------hhc---CCC-Chhhhh
Q 024228 161 I----------GYESWVDF----------LLP---------KTADALKVQFDIA----------CYK---LPT-LPAFVY 197 (270)
Q Consensus 161 ~----------~~~~~~~~----------~~~---------~~~~~~~~~~~~~----------~~~---~~~-~~~~~~ 197 (270)
. ........ ..+ .....++...... .++ ..| ......
T Consensus 175 ~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~ 254 (322)
T KOG4178|consen 175 PGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWAL 254 (322)
T ss_pred cCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccc
Confidence 0 00000000 000 0001111000000 000 011 112334
Q ss_pred hhhheeeeEEEcCCCccCCHH-HHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 198 KHILEKIHLLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 198 ~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.++.+|+++++|++|.+.+.. ..+.+.+.++...+.++++|+||+.+.|+|+++++.|.+|+++.
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 455599999999999998766 44555555663348899999999999999999999999999875
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=220.60 Aligned_cols=229 Identities=22% Similarity=0.302 Sum_probs=168.8
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 104 (270)
.+.. +|.+++|...++ +++||++||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+.+++++.+
T Consensus 70 ~~~~-~~~~i~Y~~~g~---g~~vvliHG~~~~~~-~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~ 144 (354)
T PLN02578 70 FWTW-RGHKIHYVVQGE---GLPIVLIHGFGASAF-HWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVAD 144 (354)
T ss_pred EEEE-CCEEEEEEEcCC---CCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHH
Confidence 3444 588899987764 688999999999988 99999999998899999999999999987777899999999999
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-------------hH-hhhhc--cchh---
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------------NA-ALERI--GYES--- 165 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------------~~-~~~~~--~~~~--- 165 (270)
+++.+..++++++|||+||.+++.+|.++|++|+++|++++......... .. ..... ....
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVL 224 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHH
Confidence 99999889999999999999999999999999999999987643211000 00 00000 0000
Q ss_pred ------------h---hh-hccc-c------------------cHHHHHHHHHhhhh-cCCCChhhhhhhhheeeeEEEc
Q 024228 166 ------------W---VD-FLLP-K------------------TADALKVQFDIACY-KLPTLPAFVYKHILEKIHLLWG 209 (270)
Q Consensus 166 ------------~---~~-~~~~-~------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g 209 (270)
. .. .... . ....+......... .........+.++.+|+++|+|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 304 (354)
T PLN02578 225 GFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWG 304 (354)
T ss_pred HHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEe
Confidence 0 00 0000 0 00000000000000 0011123345566799999999
Q ss_pred CCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 210 ENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 210 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
++|.++|.+.++.+.+.++ +.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 305 ~~D~~v~~~~~~~l~~~~p-~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 305 DLDPWVGPAKAEKIKAFYP-DTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCCHHHHHHHHHhCC-CCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999987 8899999 58999999999999999999986
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=215.15 Aligned_cols=234 Identities=17% Similarity=0.114 Sum_probs=169.8
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAEC 101 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~ 101 (270)
.+++++ +|.+++|...+. .++++||++||++++.. .|..+.+.|++.|+|+++|+||||.|+.+.. .++.+.+++|
T Consensus 8 ~~~~~~-~~~~~~~~~~g~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (278)
T TIGR03056 8 SRRVTV-GPFHWHVQDMGP-TAGPLLLLLHGTGASTH-SWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAED 84 (278)
T ss_pred cceeeE-CCEEEEEEecCC-CCCCeEEEEcCCCCCHH-HHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHH
Confidence 345556 799999987765 34689999999999999 9999999998889999999999999987655 5899999999
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-------hHhhhh--cc----------
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------NAALER--IG---------- 162 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------~~~~~~--~~---------- 162 (270)
+.+++++++.++++|+||||||.+++.+|.++|++++++|++++......... ...... ..
T Consensus 85 l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (278)
T TIGR03056 85 LSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAAD 164 (278)
T ss_pred HHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhccc
Confidence 99999999988999999999999999999999999999999987543211000 000000 00
Q ss_pred chhhhhhc-------ccccHHHHHHHHHh-------hhhcCCCC---hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 163 YESWVDFL-------LPKTADALKVQFDI-------ACYKLPTL---PAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 163 ~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
........ .............. ......+. ....+.++.+|+++++|++|.++|++..+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~ 244 (278)
T TIGR03056 165 QQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAAT 244 (278)
T ss_pred CcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHH
Confidence 00000000 00000000000000 00000000 012234456899999999999999999999998
Q ss_pred HhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 226 QVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 226 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.++ ++++++++++||+++.+.|+++++.|.+|++
T Consensus 245 ~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 245 RVP-TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hcc-CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 887 8999999999999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=224.22 Aligned_cols=242 Identities=17% Similarity=0.166 Sum_probs=167.2
Q ss_pred eeEEEeecCCeEEEEEecCCC--CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASF 97 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~ 97 (270)
+..++..++|.++++....+. +.+++|||+||++++....|..+++.|++. |+|+++|+||||.|+..... .+.+.
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 141 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDD 141 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHH
Confidence 344555668999988665442 457899999999988662468889999876 99999999999999865433 58889
Q ss_pred HHHHHHHHHHHhCC------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh-----hhHhh---hhccc
Q 024228 98 QAECMAKGLRKLGV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-----SNAAL---ERIGY 163 (270)
Q Consensus 98 ~~~~~~~~l~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-----~~~~~---~~~~~ 163 (270)
+++|+.++++.+.. .+++|+||||||.+++.++.++|++++++|+++|........ ..... .....
T Consensus 142 ~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p 221 (349)
T PLN02385 142 LVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLP 221 (349)
T ss_pred HHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCC
Confidence 99999999988753 279999999999999999999999999999999865432111 00000 00000
Q ss_pred -------hhhhhhcccccHH-HHHHHHHhhhhc-------------CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHH
Q 024228 164 -------ESWVDFLLPKTAD-ALKVQFDIACYK-------------LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARN 222 (270)
Q Consensus 164 -------~~~~~~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 222 (270)
............. .... .....+. ........+.++.+|+|+++|++|.++|++.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~ 300 (349)
T PLN02385 222 KAKLVPQKDLAELAFRDLKKRKMAE-YNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKF 300 (349)
T ss_pred CceecCCCccccccccCHHHHHHhh-cCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHH
Confidence 0000000000000 0000 0000000 0000112234456999999999999999999999
Q ss_pred HHHHhc-CCceEEEecCCCcceeecchHh----HHHHHHHHHHhhhh
Q 024228 223 LKEQVG-QNATMESIEKAGHLVNLERPFV----YNRQLKTILASLVH 264 (270)
Q Consensus 223 ~~~~~~-~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~~ 264 (270)
+++.++ ++.++++++++||.++.++|++ +.+.|.+||+++..
T Consensus 301 l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 301 LYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 998875 3689999999999999888876 78889999987753
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=214.22 Aligned_cols=219 Identities=17% Similarity=0.193 Sum_probs=152.1
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK 113 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~ 113 (270)
++|...|. +.|+|||+||+++++. .|..+.+.|.++|+|+++|+||||.|+... .++.+++++++. ++..++
T Consensus 4 ~~y~~~G~--g~~~ivllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~~~~~ 75 (256)
T PRK10349 4 IWWQTKGQ--GNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQAPDK 75 (256)
T ss_pred cchhhcCC--CCCeEEEECCCCCChh-HHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hcCCCC
Confidence 45555554 3357999999999999 999999999988999999999999998543 466666666654 356689
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-----hh----hHhhhhcc--chhhh-hh-----cccccH-
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-----VS----NAALERIG--YESWV-DF-----LLPKTA- 175 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-----~~----~~~~~~~~--~~~~~-~~-----~~~~~~- 175 (270)
++++||||||.+|+.+|.++|++|+++|++++.+..... .. ........ ..... .. ......
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 999999999999999999999999999999875432110 00 00000000 00000 00 000000
Q ss_pred HHHHHHHHhh---------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC
Q 024228 176 DALKVQFDIA---------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240 (270)
Q Consensus 176 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (270)
.......... ...........+.++.+|+|+++|++|.++|.+.++.+.+.++ ++++++++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-~~~~~~i~~~g 234 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAA 234 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-CCeEEEeCCCC
Confidence 0000000000 0000111223445566999999999999999999999999887 99999999999
Q ss_pred cceeecchHhHHHHHHHHHHh
Q 024228 241 HLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~~ 261 (270)
|++++|+|+++++.+.+|-++
T Consensus 235 H~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 235 HAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCccccCHHHHHHHHHHHhcc
Confidence 999999999999999998653
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=220.91 Aligned_cols=237 Identities=16% Similarity=0.239 Sum_probs=166.8
Q ss_pred eeEEEeecCCeEEEEEecCCCC--CCceEEEeCCCCCcccccHHH-HHHHhh----ccceEEeecCCCCCCCCCCC-CCC
Q 024228 22 TQRTIEIEPGTILNIWVPKKTT--KKHAVVLLHPFGFDGILTWQF-QVLALA----KTYEVYVPDFLFFGSSVTDR-PDR 93 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~-~~~~l~----~~~~v~~~d~~g~G~s~~~~-~~~ 93 (270)
...++.+ +|.+++|...++.. .+++|||+||++++.. .|.. +++.|. +.|+|+++|+||||.|+.+. ..+
T Consensus 177 ~~~~~~~-~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~y 254 (481)
T PLN03087 177 CTSWLSS-SNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLY 254 (481)
T ss_pred eeeeEee-CCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcC
Confidence 4455556 57899998877643 3689999999999998 8985 446665 35999999999999998654 347
Q ss_pred ChHHHHHHHH-HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh---hHhhhhc--------
Q 024228 94 TASFQAECMA-KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS---NAALERI-------- 161 (270)
Q Consensus 94 ~~~~~~~~~~-~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---~~~~~~~-------- 161 (270)
+.+++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++........ .......
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPP 334 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCc
Confidence 8999999994 899999999999999999999999999999999999999997643221110 0000000
Q ss_pred -cchh----hh----hhc------ccccHHH---------HHHHHHhh----------------hhcCC----CChhhhh
Q 024228 162 -GYES----WV----DFL------LPKTADA---------LKVQFDIA----------------CYKLP----TLPAFVY 197 (270)
Q Consensus 162 -~~~~----~~----~~~------~~~~~~~---------~~~~~~~~----------------~~~~~----~~~~~~~ 197 (270)
.... +. ... ....... ........ ..... .......
T Consensus 335 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~ 414 (481)
T PLN03087 335 IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR 414 (481)
T ss_pred cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHH
Confidence 0000 00 000 0000000 00000000 00000 0001122
Q ss_pred hhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHHHHh
Q 024228 198 KHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTILAS 261 (270)
Q Consensus 198 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 261 (270)
.++.+|+|+++|++|.++|++..+.+++.++ ++++++++++||++++ ++|+++++.|.+|++.
T Consensus 415 ~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 415 DQLKCDVAIFHGGDDELIPVECSYAVKAKVP-RARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 2466999999999999999999999999998 9999999999999986 9999999999999864
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=212.24 Aligned_cols=225 Identities=19% Similarity=0.211 Sum_probs=156.5
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHH---HHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQ---VLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKG 105 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~ 105 (270)
|..++|...++ +|+||++||++.+.. .|..+ +..+.+. |+|+++|+||||.|+..... .....+++++.++
T Consensus 19 ~~~~~y~~~g~---~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 19 NFRIHYNEAGN---GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred ceeEEEEecCC---CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 45688877664 678999999998877 77543 3445444 99999999999999865422 1222468899999
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-------hhhHhhhhcc---chh---hhhh--c
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-------VSNAALERIG---YES---WVDF--L 170 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-------~~~~~~~~~~---~~~---~~~~--~ 170 (270)
++.++.++++++||||||.+++.+|.++|++++++|++++....... .......... ... .... .
T Consensus 95 l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
T TIGR03343 95 MDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLF 174 (282)
T ss_pred HHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999875321100 0000000000 000 0000 0
Q ss_pred cccc----------------HHHHHHHHHhhhh--cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCce
Q 024228 171 LPKT----------------ADALKVQFDIACY--KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNAT 232 (270)
Q Consensus 171 ~~~~----------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 232 (270)
.+.. ............. ...+.....+.++.+|+|+++|++|.+++++.++.+++.++ +++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~~~ 253 (282)
T TIGR03343 175 DQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-DAQ 253 (282)
T ss_pred CcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-CCE
Confidence 0000 0000000000000 00111233456677999999999999999999999999998 999
Q ss_pred EEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 233 MESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 233 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+++++++||+++.|+|+.+.+.|.+||+
T Consensus 254 ~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 254 LHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999999999999999999999996
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=215.62 Aligned_cols=233 Identities=17% Similarity=0.180 Sum_probs=167.9
Q ss_pred EEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC----CCChHHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP----DRTASFQA 99 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~----~~~~~~~~ 99 (270)
......+|.+++|...++ .++++|||+||++++.. .|+.+++.|++.|+|+++|+||||.|+.+.. .++.+.++
T Consensus 107 ~~~~~~~~~~~~y~~~G~-~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a 184 (383)
T PLN03084 107 QSQASSDLFRWFCVESGS-NNNPPVLLIHGFPSQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYV 184 (383)
T ss_pred eeEEcCCceEEEEEecCC-CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHH
Confidence 333345889999988775 34689999999999999 9999999998889999999999999987653 47999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-hhhHh--h-h----hc----cchhhh
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-VSNAA--L-E----RI----GYESWV 167 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-~~~~~--~-~----~~----~~~~~~ 167 (270)
+++.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++....... ..... . . .. ......
T Consensus 185 ~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~ 264 (383)
T PLN03084 185 SSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASD 264 (383)
T ss_pred HHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHh
Confidence 99999999999999999999999999999999999999999999987532110 00000 0 0 00 000000
Q ss_pred hhcc---cc--cHHH-----------------HHHHHHhhhhcCCCChhhhh-----hhhheeeeEEEcCCCccCCHHHH
Q 024228 168 DFLL---PK--TADA-----------------LKVQFDIACYKLPTLPAFVY-----KHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 168 ~~~~---~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~~-----~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
..+. .. .... .................... ..+.+|+++++|++|.+++.+..
T Consensus 265 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~ 344 (383)
T PLN03084 265 KALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGV 344 (383)
T ss_pred hhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHH
Confidence 0000 00 0000 00000000000000000000 23468999999999999999988
Q ss_pred HHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 221 RNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+.+++. . +.++++++++||+++.|+|+++++.|.+||.
T Consensus 345 ~~~a~~-~-~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 345 EDFCKS-S-QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHh-c-CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 888876 3 7899999999999999999999999999986
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=213.41 Aligned_cols=220 Identities=17% Similarity=0.146 Sum_probs=158.8
Q ss_pred cCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEE
Q 024228 39 PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 39 ~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G 118 (270)
+.++.++|+||++||++++.. .|..++..|+++|+|+++|+||||.|... ...+.+++++|+.+++++++.++++|+|
T Consensus 10 ~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~~~~lvG 87 (255)
T PRK10673 10 AQNPHNNSPIVLVHGLFGSLD-NLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIEKATFIG 87 (255)
T ss_pred CCCCCCCCCEEEECCCCCchh-HHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCceEEEE
Confidence 344457899999999999998 99999999998899999999999999864 4578999999999999999999999999
Q ss_pred EchhHHHHHHHHhhCccccccEEEecccCCCCch-hhhHhhhhc------cchh---hhhhcccc-cHHHHHHHHHhhhh
Q 024228 119 VSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-VSNAALERI------GYES---WVDFLLPK-TADALKVQFDIACY 187 (270)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-~~~~~~~~~------~~~~---~~~~~~~~-~~~~~~~~~~~~~~ 187 (270)
|||||.+++.+|.++|++|+++|++++.+..... ......... .... ........ .......+......
T Consensus 88 hS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (255)
T PRK10673 88 HSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFV 167 (255)
T ss_pred ECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCC
Confidence 9999999999999999999999999754322110 000000000 0000 00000000 00000000000000
Q ss_pred cCCC--------------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHH
Q 024228 188 KLPT--------------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253 (270)
Q Consensus 188 ~~~~--------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 253 (270)
...+ ........+.+|+|+|+|++|..++.+..+.+.+.++ +.++++++++||+++.++|+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~ 246 (255)
T PRK10673 168 DGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-QARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_pred cceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-CcEEEEeCCCCCeeeccCHHHHHH
Confidence 0000 0001123345899999999999999999999999988 899999999999999999999999
Q ss_pred HHHHHHHh
Q 024228 254 QLKTILAS 261 (270)
Q Consensus 254 ~i~~fl~~ 261 (270)
.|.+||++
T Consensus 247 ~l~~fl~~ 254 (255)
T PRK10673 247 AIRRYLND 254 (255)
T ss_pred HHHHHHhc
Confidence 99999975
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=220.11 Aligned_cols=231 Identities=18% Similarity=0.174 Sum_probs=159.4
Q ss_pred CCeEEEEEecCCCC------CCceEEEeCCCCCcccccHH--HHHHHh--------hccceEEeecCCCCCCCCCCCC--
Q 024228 30 PGTILNIWVPKKTT------KKHAVVLLHPFGFDGILTWQ--FQVLAL--------AKTYEVYVPDFLFFGSSVTDRP-- 91 (270)
Q Consensus 30 ~g~~l~~~~~~~~~------~~~~vv~~hG~~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~g~G~s~~~~~-- 91 (270)
+|.+++|...|... .+|+|||+||++++.. .|. .+.+.| +++|+|+++|+||||.|+.+..
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 67888998877521 1689999999999887 775 454444 5569999999999999986542
Q ss_pred -----CCChHHHHHHHHHHH-HHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh---hhH----h
Q 024228 92 -----DRTASFQAECMAKGL-RKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV---SNA----A 157 (270)
Q Consensus 92 -----~~~~~~~~~~~~~~l-~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~---~~~----~ 157 (270)
.++++++++++.+++ ++++.++++ ++||||||.+|+.+|.++|++|+++|++++........ ... .
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~ 206 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIES 206 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHH
Confidence 368889998888854 889988885 89999999999999999999999999998754221100 000 0
Q ss_pred hhhc-cc--------h-hhhh---h-------------cccccHH----HHHHHHH------------hhhhcCCCChhh
Q 024228 158 LERI-GY--------E-SWVD---F-------------LLPKTAD----ALKVQFD------------IACYKLPTLPAF 195 (270)
Q Consensus 158 ~~~~-~~--------~-~~~~---~-------------~~~~~~~----~~~~~~~------------~~~~~~~~~~~~ 195 (270)
.... .. . .... . ....... .+..... ............
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 286 (360)
T PRK06489 207 IRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSP 286 (360)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHH
Confidence 0000 00 0 0000 0 0000000 0000000 000001112234
Q ss_pred hhhhhheeeeEEEcCCCccCCHHHH--HHHHHHhcCCceEEEecCC----CcceeecchHhHHHHHHHHHHhhh
Q 024228 196 VYKHILEKIHLLWGENDKIFDMQVA--RNLKEQVGQNATMESIEKA----GHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 196 ~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.+.++.+|+|+|+|++|.++|++.+ +.+.+.++ +.++++++++ ||.++ ++|+++++.|.+||+++.
T Consensus 287 ~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 287 DLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 4566679999999999999998875 78888888 8999999996 99997 899999999999998764
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=211.22 Aligned_cols=224 Identities=22% Similarity=0.293 Sum_probs=162.2
Q ss_pred EEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhCCC
Q 024228 35 NIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLGVE 112 (270)
Q Consensus 35 ~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~~~ 112 (270)
+|...++. .++|+||++||++++.. .|..+++.|.++|+|+++|+||||.|.... ..++.+++++++.++++.++.+
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~ 80 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGS-YWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE 80 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchh-HHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 45555542 35789999999999998 999999999888999999999999998654 3478999999999999999999
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh------hhhccchhhhh----hccc-----ccHHH
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA------LERIGYESWVD----FLLP-----KTADA 177 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~----~~~~-----~~~~~ 177 (270)
+++++||||||.+++.++.++|++++++|++++............ ........... ...+ .....
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAAR 160 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchh
Confidence 999999999999999999999999999999987654322111000 00000000000 0000 00000
Q ss_pred H--------------HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcce
Q 024228 178 L--------------KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243 (270)
Q Consensus 178 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 243 (270)
. ..................+.++.+|+++++|++|.++|++.++.+++.++ +.+++.++++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 239 (257)
T TIGR03611 161 LAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-NAQLKLLPYGGHAS 239 (257)
T ss_pred hhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-CceEEEECCCCCCc
Confidence 0 00000000000111123344556999999999999999999999999987 88999999999999
Q ss_pred eecchHhHHHHHHHHHH
Q 024228 244 NLERPFVYNRQLKTILA 260 (270)
Q Consensus 244 ~~~~~~~~~~~i~~fl~ 260 (270)
++++|+++.+.|.+||+
T Consensus 240 ~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 240 NVTDPETFNRALLDFLK 256 (257)
T ss_pred cccCHHHHHHHHHHHhc
Confidence 99999999999999986
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=213.48 Aligned_cols=240 Identities=12% Similarity=0.072 Sum_probs=165.3
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC------CCC
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP------DRT 94 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~------~~~ 94 (270)
+...+...+|.+++|...++..++++||++||++++.. .|..++..+.+. |+|+++|+||||.|+.... ..+
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 109 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVER 109 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcccc
Confidence 34444555899999988765456789999999999888 899999877766 9999999999999975432 147
Q ss_pred hHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH----hhhhcc----
Q 024228 95 ASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA----ALERIG---- 162 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~----~~~~~~---- 162 (270)
.+++++|+.++++.+ +..+++++||||||.+++.+|.++|++++++|+++|........... ......
T Consensus 110 ~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (330)
T PRK10749 110 FNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPR 189 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcC
Confidence 889999999999886 56799999999999999999999999999999999875422111000 000000
Q ss_pred c--------hhhhhh-c----ccccHHHHHHHHHhhhhcCCC-----C----h---------hhhhhhhheeeeEEEcCC
Q 024228 163 Y--------ESWVDF-L----LPKTADALKVQFDIACYKLPT-----L----P---------AFVYKHILEKIHLLWGEN 211 (270)
Q Consensus 163 ~--------~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~-----~----~---------~~~~~~~~~P~l~i~g~~ 211 (270)
. ...... . ..................... . . .....++.+|+|+++|++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~ 269 (330)
T PRK10749 190 IRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEE 269 (330)
T ss_pred CCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCC
Confidence 0 000000 0 000111111111100000000 0 0 012334559999999999
Q ss_pred CccCCHHHHHHHHHHhc------CCceEEEecCCCcceeecch---HhHHHHHHHHHHhh
Q 024228 212 DKIFDMQVARNLKEQVG------QNATMESIEKAGHLVNLERP---FVYNRQLKTILASL 262 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 262 (270)
|.+++++.++.+++.++ .++++++++|+||.++.|.+ +.+.+.|.+||+++
T Consensus 270 D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 270 ERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999999998888763 24689999999999998775 56888899999764
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=209.76 Aligned_cols=225 Identities=20% Similarity=0.220 Sum_probs=163.8
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK 113 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~ 113 (270)
++|...++.+++|+||++||++.+.. .|..+++.|.+.|+|+++|+||||.|+.....++.+++++++.++++.++.++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLR-MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIER 80 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchh-hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 46666665446789999999999998 99999999987799999999999999876666899999999999999999899
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-hHhhhh---ccchh-----h----hhhcccccHH---H
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-NAALER---IGYES-----W----VDFLLPKTAD---A 177 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-~~~~~~---~~~~~-----~----~~~~~~~~~~---~ 177 (270)
++++|||+||.+++.+|.++|++++++|++++......... ...... ..... . .......... .
T Consensus 81 v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T TIGR02427 81 AVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDL 160 (251)
T ss_pred eEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHH
Confidence 99999999999999999999999999999987643221100 000000 00000 0 0000000000 0
Q ss_pred HHHHHHh---------hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 178 LKVQFDI---------ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 178 ~~~~~~~---------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
....... ............+.++.+|+++++|++|.++|.+..+.+.+.++ +.++++++++||+.+.++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p 239 (251)
T TIGR02427 161 YRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-GARFAEIRGAGHIPCVEQP 239 (251)
T ss_pred HHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-CceEEEECCCCCcccccCh
Confidence 1100000 00000111122344556999999999999999999999998887 8899999999999999999
Q ss_pred HhHHHHHHHHHH
Q 024228 249 FVYNRQLKTILA 260 (270)
Q Consensus 249 ~~~~~~i~~fl~ 260 (270)
+++.+.|.+|++
T Consensus 240 ~~~~~~i~~fl~ 251 (251)
T TIGR02427 240 EAFNAALRDFLR 251 (251)
T ss_pred HHHHHHHHHHhC
Confidence 999999999974
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=206.83 Aligned_cols=237 Identities=15% Similarity=0.077 Sum_probs=160.5
Q ss_pred EEeecCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAEC 101 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~ 101 (270)
++..+||.+++|....+ ...++.|+++||+++++. .|..+++.|++. |+|+++|+||||.|+..... .+...+++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 34455899998865444 244567777799999999 999999999887 99999999999999754322 455666777
Q ss_pred HHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh----h-ccchhhh----h
Q 024228 102 MAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE----R-IGYESWV----D 168 (270)
Q Consensus 102 ~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~----~-~~~~~~~----~ 168 (270)
+.+.++.+ ...+++|+||||||.+|+.+|.++|++++++|+++|.............. . ....... .
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCP 162 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCH
Confidence 77777654 34589999999999999999999999999999999865422111000000 0 0000000 0
Q ss_pred hcccccHHHHHHHHHhhhh--------------cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE
Q 024228 169 FLLPKTADALKVQFDIACY--------------KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME 234 (270)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 234 (270)
................... .........+.++.+|+|+++|++|.++|++.++.+.+.+..+.++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~ 242 (276)
T PHA02857 163 ESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIK 242 (276)
T ss_pred hhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEE
Confidence 0000000000000000000 00000112344555999999999999999999999998875478999
Q ss_pred EecCCCcceeecch---HhHHHHHHHHHHhh
Q 024228 235 SIEKAGHLVNLERP---FVYNRQLKTILASL 262 (270)
Q Consensus 235 ~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 262 (270)
+++++||.++.|.+ +++.+.+.+||...
T Consensus 243 ~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 243 IYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999998865 56889999999875
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=212.58 Aligned_cols=243 Identities=18% Similarity=0.165 Sum_probs=164.7
Q ss_pred eeEEEeecCCeEEEEEecCCC---CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChH
Q 024228 22 TQRTIEIEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTAS 96 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~ 96 (270)
+...+...||.+++|+...+. +.+++||++||++.+....|..++..|++. |+|+++|+||||.|+.... ..+.+
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 112 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVD 112 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHH
Confidence 355677779999998654332 346789999999866432567778888876 9999999999999975433 35788
Q ss_pred HHHHHHHHHHHHhCC------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-----hH---hhhhcc
Q 024228 97 FQAECMAKGLRKLGV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-----NA---ALERIG 162 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-----~~---~~~~~~ 162 (270)
.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|......... .. ......
T Consensus 113 ~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (330)
T PLN02298 113 LVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFL 192 (330)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHC
Confidence 899999999998743 3799999999999999999999999999999998754322110 00 000000
Q ss_pred chhh-h--hhcccccH--HHHHHHHHh--hhhcCC-------------CChhhhhhhhheeeeEEEcCCCccCCHHHHHH
Q 024228 163 YESW-V--DFLLPKTA--DALKVQFDI--ACYKLP-------------TLPAFVYKHILEKIHLLWGENDKIFDMQVARN 222 (270)
Q Consensus 163 ~~~~-~--~~~~~~~~--~~~~~~~~~--~~~~~~-------------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 222 (270)
.... . ........ ......... ..+... ......+..+.+|+|+++|++|.++|++.++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~ 272 (330)
T PLN02298 193 PTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRA 272 (330)
T ss_pred CCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 0000 0 00000000 000000000 000000 00112344556999999999999999999999
Q ss_pred HHHHhc-CCceEEEecCCCcceeecchH----hHHHHHHHHHHhhhh
Q 024228 223 LKEQVG-QNATMESIEKAGHLVNLERPF----VYNRQLKTILASLVH 264 (270)
Q Consensus 223 ~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~~~ 264 (270)
+++.++ .+++++++++++|.++.++|+ .+.+.|.+||.+...
T Consensus 273 l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 273 LYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 988875 468999999999999988775 467788899987754
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=197.63 Aligned_cols=239 Identities=19% Similarity=0.228 Sum_probs=162.5
Q ss_pred eeEEEeecCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC----CChH
Q 024228 22 TQRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD----RTAS 96 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----~~~~ 96 (270)
..+.+.++++..+....... ..+++++|++||+|.... .|..-.+.|++..+|+++|++|+|+|+++.-. ....
T Consensus 66 ~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g-~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~ 144 (365)
T KOG4409|consen 66 SKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLG-LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEK 144 (365)
T ss_pred ceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHH-HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchH
Confidence 45566666666654433332 356899999999999999 99999999999999999999999999988743 3445
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-h-------hhHhhhhcc------
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-V-------SNAALERIG------ 162 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-~-------~~~~~~~~~------ 162 (270)
.+++-+.++....++++.+|+|||+||+++..||.++|++|+.+||++|+...... . ...+.....
T Consensus 145 ~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 224 (365)
T KOG4409|consen 145 EFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNF 224 (365)
T ss_pred HHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcC
Confidence 67888999999999999999999999999999999999999999999998654321 0 001110000
Q ss_pred -chhhh-----------hhcccccHHHH---------HHHHHhh--------------hhcCCCChhhhhhhh---h--e
Q 024228 163 -YESWV-----------DFLLPKTADAL---------KVQFDIA--------------CYKLPTLPAFVYKHI---L--E 202 (270)
Q Consensus 163 -~~~~~-----------~~~~~~~~~~~---------~~~~~~~--------------~~~~~~~~~~~~~~~---~--~ 202 (270)
..... ..+.+.....+ .+.+... .....|.....+.++ . +
T Consensus 225 nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~ 304 (365)
T KOG4409|consen 225 NPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDV 304 (365)
T ss_pred CHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCC
Confidence 00000 00000000000 0000000 000011111111111 1 9
Q ss_pred eeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 203 KIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 203 P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
|+++|+|++|.+ +......+.+.+. ..++.++++++||..++++|+.|++.+.++++..
T Consensus 305 pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 305 PVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred CEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 999999999976 4455555555433 4689999999999999999999999999998753
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=206.43 Aligned_cols=244 Identities=29% Similarity=0.402 Sum_probs=171.3
Q ss_pred cCCceeEEEeecCC--eEEEEEecCC-----C--CCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCC
Q 024228 18 LVGMTQRTIEIEPG--TILNIWVPKK-----T--TKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSS 86 (270)
Q Consensus 18 ~~~~~~~~i~~~~g--~~l~~~~~~~-----~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s 86 (270)
........++.+.| ....-|.+.. . ..+++||++||++++.. .|+.++..|.+. +.|+++|++|+|.+
T Consensus 22 ~~~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~ 100 (326)
T KOG1454|consen 22 FVTLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYS 100 (326)
T ss_pred eccccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcC
Confidence 34556667777666 3333332222 1 36899999999999998 999999999998 99999999999954
Q ss_pred C-CCCCC-CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEE---EecccCCCCchhhhHhhhhc
Q 024228 87 V-TDRPD-RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV---VTCSVMGLTESVSNAALERI 161 (270)
Q Consensus 87 ~-~~~~~-~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i---~~~~~~~~~~~~~~~~~~~~ 161 (270)
+ .+... ++...+++.+..+......++++++|||+||.+|+.+|+.+|+.|++++ ++++................
T Consensus 101 s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~ 180 (326)
T KOG1454|consen 101 SPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL 180 (326)
T ss_pred CCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh
Confidence 4 33333 8888889999999999888899999999999999999999999999999 56555443322211111100
Q ss_pred c-chhhhhhcc------------------------c--ccHHHHHHHHH---------h-----hhhcCC--CChhhhhh
Q 024228 162 G-YESWVDFLL------------------------P--KTADALKVQFD---------I-----ACYKLP--TLPAFVYK 198 (270)
Q Consensus 162 ~-~~~~~~~~~------------------------~--~~~~~~~~~~~---------~-----~~~~~~--~~~~~~~~ 198 (270)
. ......... . ........... . ...... ........
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK 260 (326)
T ss_pred hhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc
Confidence 0 000000000 0 00000000000 0 000001 22233444
Q ss_pred hhh-eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 199 HIL-EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 199 ~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++. +|+|+++|++|.++|.+.+..+.+.++ ++++++++++||.+++|.|+++++.|..|+++..
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p-n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKLP-NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhCC-CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 555 999999999999999999999999996 9999999999999999999999999999998753
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=200.39 Aligned_cols=207 Identities=21% Similarity=0.199 Sum_probs=144.8
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
+|+|||+||++++.. .|..+++.|. +|+|+++|+||||.|+.+.. .+.+.+++|+.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 578999999999999 9999999884 69999999999999986543 58899999999999999999999999999999
Q ss_pred HHHHHHhhCccc-cccEEEecccCCCCchhhh--Hh------hhhc---cchhhh-hh--------cccccHHHH-----
Q 024228 125 VGFKMAEMYPDL-VESMVVTCSVMGLTESVSN--AA------LERI---GYESWV-DF--------LLPKTADAL----- 178 (270)
Q Consensus 125 ~a~~~a~~~p~~-v~~~i~~~~~~~~~~~~~~--~~------~~~~---~~~~~~-~~--------~~~~~~~~~----- 178 (270)
+++.+|.++|++ |++++++++.......... .. .... ...... .. .........
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRS 158 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcc
Confidence 999999999664 9999998876543221110 00 0000 000000 00 000000000
Q ss_pred -------HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhH
Q 024228 179 -------KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 179 -------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 251 (270)
...+..............+.++.+|+++++|++|..+. .+.+. . ++++++++++||+++.|+|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~-~~~~~~i~~~gH~~~~e~p~~~ 231 (242)
T PRK11126 159 NNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-L-ALPLHVIPNAGHNAHRENPAAF 231 (242)
T ss_pred cCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-h-cCeEEEeCCCCCchhhhChHHH
Confidence 00000000000111123455667999999999998652 22333 2 7899999999999999999999
Q ss_pred HHHHHHHHHh
Q 024228 252 NRQLKTILAS 261 (270)
Q Consensus 252 ~~~i~~fl~~ 261 (270)
++.|.+|++.
T Consensus 232 ~~~i~~fl~~ 241 (242)
T PRK11126 232 AASLAQILRL 241 (242)
T ss_pred HHHHHHHHhh
Confidence 9999999975
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-31 Score=199.24 Aligned_cols=228 Identities=15% Similarity=0.106 Sum_probs=160.3
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChHHHHHHHHHHHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLR 107 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~l~ 107 (270)
+|.+++|..+.. ++|+|||+||++.+.. .|..+...|.+. |+|+++|+||||.|..... ..+++++++++.++++
T Consensus 5 ~~~~~~~~~~~~--~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 5 NGEEVTDMKPNR--QPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccccccccC--CCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHH
Confidence 688888877533 5789999999999999 999999999875 9999999999998864433 3789999999999999
Q ss_pred HhC-CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-Hhhhhcc-chhh------------------
Q 024228 108 KLG-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-AALERIG-YESW------------------ 166 (270)
Q Consensus 108 ~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-~~~~~~~-~~~~------------------ 166 (270)
.+. .++++|+||||||.++..++.++|++|+++|++++.......... ....... ....
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTS 161 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCce
Confidence 985 579999999999999999999999999999999875432111000 0000000 0000
Q ss_pred --------hhhcccccHHHHHHHHHhhhh----cC--CCChhhhhhhh-heeeeEEEcCCCccCCHHHHHHHHHHhcCCc
Q 024228 167 --------VDFLLPKTADALKVQFDIACY----KL--PTLPAFVYKHI-LEKIHLLWGENDKIFDMQVARNLKEQVGQNA 231 (270)
Q Consensus 167 --------~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 231 (270)
...+................. .. ..........+ .+|+++|.|++|..+|++..+.+.+.++ ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~-~~ 240 (273)
T PLN02211 162 AIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP-PS 240 (273)
T ss_pred eeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC-cc
Confidence 000000000000000000000 00 00000111223 4899999999999999999999999987 77
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+++.++ +||.+++++|+++.+.|.++....
T Consensus 241 ~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 241 QVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred EEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 899997 899999999999999999887643
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-31 Score=206.20 Aligned_cols=233 Identities=18% Similarity=0.133 Sum_probs=155.4
Q ss_pred CCeEEEEEecCCC--CCCceEEEeCCCCCcccccHHHHH---HHhhc-cceEEeecCCCCCCCCCCCC---CCChH----
Q 024228 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQV---LALAK-TYEVYVPDFLFFGSSVTDRP---DRTAS---- 96 (270)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~-~~~v~~~d~~g~G~s~~~~~---~~~~~---- 96 (270)
+|.+++|...|.. .+.|+||++||++++.. .|..++ +.|.. +|+|+++|+||||.|+.+.. .++.+
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 6788899888753 23466777777777766 665443 46754 49999999999999985532 23333
Q ss_pred -HHHHHHHH----HHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh---Hhh---------
Q 024228 97 -FQAECMAK----GLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN---AAL--------- 158 (270)
Q Consensus 97 -~~~~~~~~----~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~---~~~--------- 158 (270)
.+++|+.+ ++++++.+++ +|+||||||++|+.+|.++|++|+++|++++.......... ...
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~ 182 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAF 182 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 24566654 6788999994 79999999999999999999999999999876542211000 000
Q ss_pred -----------------hhccchhh-hhhccc--------cc-HHHHHHHHHhh---------------hh-----cC--
Q 024228 159 -----------------ERIGYESW-VDFLLP--------KT-ADALKVQFDIA---------------CY-----KL-- 189 (270)
Q Consensus 159 -----------------~~~~~~~~-~~~~~~--------~~-~~~~~~~~~~~---------------~~-----~~-- 189 (270)
........ ...+.. .. ........... .. ..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (339)
T PRK07581 183 NGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPA 262 (339)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcc
Confidence 00000000 000000 00 00000000000 00 00
Q ss_pred -CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecC-CCcceeecchHhHHHHHHHHHHhhhh
Q 024228 190 -PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK-AGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 190 -~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.......+.++.+|+|+|+|++|..+|++.++.+.+.++ +++++++++ +||..++++++++.+.|.+||++...
T Consensus 263 ~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 263 YGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-NAELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred cCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 001223445566999999999999999999999999987 899999998 89999999999999999999998653
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-30 Score=199.20 Aligned_cols=233 Identities=20% Similarity=0.155 Sum_probs=160.0
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC---CCChHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP---DRTASFQAE 100 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~---~~~~~~~~~ 100 (270)
.+++ +|..+.|...+....+++|||+||++++....|..+...+.+. |+|+++|+||+|.|..+.. ..+.+.+++
T Consensus 6 ~~~~-~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred eecC-CCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 3455 5667777766654457899999998766552556666777764 9999999999999986532 268899999
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--Hhhhhccc---hhhhhhc-----
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERIGY---ESWVDFL----- 170 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~----- 170 (270)
++.+++++++.++++++||||||.+++.+|.++|++++++|++++.......... ........ .......
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDY 164 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCc
Confidence 9999999999899999999999999999999999999999999876533211100 00000000 0000000
Q ss_pred cc-------------------ccHHHHHHHHHhh---hhc--------------CCCChhhhhhhhheeeeEEEcCCCcc
Q 024228 171 LP-------------------KTADALKVQFDIA---CYK--------------LPTLPAFVYKHILEKIHLLWGENDKI 214 (270)
Q Consensus 171 ~~-------------------~~~~~~~~~~~~~---~~~--------------~~~~~~~~~~~~~~P~l~i~g~~D~~ 214 (270)
.. ............. .+. ..+.....+.++.+|+++++|++|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 244 (288)
T TIGR01250 165 DNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM 244 (288)
T ss_pred chHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc
Confidence 00 0000000000000 000 00011223445669999999999985
Q ss_pred CCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 215 FDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+++..+.+.+.++ +.++++++++||+.+.++|+++.+.|.+||+
T Consensus 245 -~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 245 -TPEAAREMQELIA-GSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred -CHHHHHHHHHhcc-CCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 6678888888887 8899999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=198.05 Aligned_cols=205 Identities=27% Similarity=0.329 Sum_probs=150.2
Q ss_pred EEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC--CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHH
Q 024228 48 VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP--DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~ 125 (270)
|||+||++++.. .|..+++.|+++|+|+++|+||+|.|+.... ..+.+++++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999998 9999999997669999999999999987653 5788999999999999999999999999999999
Q ss_pred HHHHHhhCccccccEEEecccCCCCchh----hhHhhhhcc-----------chhhhhhcccccHHHHH-----HHHHhh
Q 024228 126 GFKMAEMYPDLVESMVVTCSVMGLTESV----SNAALERIG-----------YESWVDFLLPKTADALK-----VQFDIA 185 (270)
Q Consensus 126 a~~~a~~~p~~v~~~i~~~~~~~~~~~~----~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-----~~~~~~ 185 (270)
++.++.++|++|+++|++++........ ......... ................. .+....
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYL 159 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999987543211 011111100 00000111100000000 000000
Q ss_pred hh-cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHH
Q 024228 186 CY-KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254 (270)
Q Consensus 186 ~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 254 (270)
.. .........+..+.+|+++++|++|.+++.+..+.+.+.++ ++++++++++||++++++|+++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 160 RSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred ccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHHHCHHHHhcC
Confidence 00 00011123344555999999999999999999999999887 9999999999999999999998763
|
... |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-30 Score=205.73 Aligned_cols=234 Identities=20% Similarity=0.173 Sum_probs=161.0
Q ss_pred CCeEEEEEecCCC--CCCceEEEeCCCCCccccc-------------HHHHH----HHhhccceEEeecCCCC-CCCCCC
Q 024228 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGILT-------------WQFQV----LALAKTYEVYVPDFLFF-GSSVTD 89 (270)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~-------------~~~~~----~~l~~~~~v~~~d~~g~-G~s~~~ 89 (270)
+|.+++|...|.. ..+|+||++||++++.. . |..++ ..+.++|+|+++|++|+ |.|..+
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHH-VAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchh-hcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 5667889888752 24689999999999887 4 56665 33355699999999983 444322
Q ss_pred C--------------CCCChHHHHHHHHHHHHHhCCCc-eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh
Q 024228 90 R--------------PDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154 (270)
Q Consensus 90 ~--------------~~~~~~~~~~~~~~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~ 154 (270)
. ..++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 189 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI 189 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH
Confidence 1 14789999999999999999999 48999999999999999999999999999998764332100
Q ss_pred ---h---Hhhh-hcc------------------------------chhhhhhccc----c----------cHHHHHH---
Q 024228 155 ---N---AALE-RIG------------------------------YESWVDFLLP----K----------TADALKV--- 180 (270)
Q Consensus 155 ---~---~~~~-~~~------------------------------~~~~~~~~~~----~----------~~~~~~~--- 180 (270)
. .... ... .......+.. . ....+..
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQG 269 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHH
Confidence 0 0000 000 0000000000 0 0000000
Q ss_pred --HHHh----------hhhcC-C------CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCc----eEEEec
Q 024228 181 --QFDI----------ACYKL-P------TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNA----TMESIE 237 (270)
Q Consensus 181 --~~~~----------~~~~~-~------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~ 237 (270)
.... ..... . ..-...+.++.+|+|+|+|++|.++|++.++.+.+.++ +. ++++++
T Consensus 270 ~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~-~a~~~~~l~~i~ 348 (379)
T PRK00175 270 DKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALL-AAGADVSYAEID 348 (379)
T ss_pred HHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHH-hcCCCeEEEEeC
Confidence 0000 00000 0 01234455667999999999999999999999999997 54 777775
Q ss_pred -CCCcceeecchHhHHHHHHHHHHhhhhh
Q 024228 238 -KAGHLVNLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 238 -~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
++||.+++++|+++++.|.+||+++...
T Consensus 349 ~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 349 SPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred CCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 8999999999999999999999987643
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.98 E-value=8e-31 Score=197.28 Aligned_cols=208 Identities=17% Similarity=0.171 Sum_probs=146.4
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
+|+|||+||++++.. .|..+++.|.+.|+|+++|+||+|.|+.. ...+.+++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 489999999999999 99999999988899999999999998754 3456777777665543 36999999999999
Q ss_pred HHHHHHhhCccccccEEEecccCCCCchh--h----hHhhhh----cc------chhhh--hhccc-ccHHHHHHHHHhh
Q 024228 125 VGFKMAEMYPDLVESMVVTCSVMGLTESV--S----NAALER----IG------YESWV--DFLLP-KTADALKVQFDIA 185 (270)
Q Consensus 125 ~a~~~a~~~p~~v~~~i~~~~~~~~~~~~--~----~~~~~~----~~------~~~~~--~~~~~-~~~~~~~~~~~~~ 185 (270)
+++.+|.++|++++++|++++........ . ...... .. ..... ..... .............
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTL 157 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHh
Confidence 99999999999999999998765321100 0 000000 00 00000 00000 0000000000000
Q ss_pred ---------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHh
Q 024228 186 ---------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 250 (270)
Q Consensus 186 ---------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 250 (270)
...........+.++.+|+++++|++|.++|.+..+.+.+.++ ++++++++++||+++.++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~ 236 (245)
T TIGR01738 158 LARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSHAEA 236 (245)
T ss_pred hccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccCHHH
Confidence 0000111123345666999999999999999999999998887 899999999999999999999
Q ss_pred HHHHHHHHH
Q 024228 251 YNRQLKTIL 259 (270)
Q Consensus 251 ~~~~i~~fl 259 (270)
+++.|.+|+
T Consensus 237 ~~~~i~~fi 245 (245)
T TIGR01738 237 FCALLVAFK 245 (245)
T ss_pred HHHHHHhhC
Confidence 999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.8e-31 Score=205.78 Aligned_cols=238 Identities=21% Similarity=0.202 Sum_probs=160.7
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccc-----------cHHHHHH---Hh-hccceEEeecCCCCCC
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGIL-----------TWQFQVL---AL-AKTYEVYVPDFLFFGS 85 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~-----------~~~~~~~---~l-~~~~~v~~~d~~g~G~ 85 (270)
+......+ +|.+++|...|+ .++++||+||+.++... .|..++. .| +++|+|+++|+||||.
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~--~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~ 112 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGP--AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADG 112 (343)
T ss_pred eeecCCCC-CCceEEEEEecc--CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCC
Confidence 34444444 688999988775 23457777666665541 4777775 56 4569999999999998
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh--hHhhhh--
Q 024228 86 SVTDRPDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS--NAALER-- 160 (270)
Q Consensus 86 s~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~--~~~~~~-- 160 (270)
|.. ..++.+++++|+.+++++++.++. +|+||||||++|+.+|.++|++|+++|++++......... ......
T Consensus 113 s~~--~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~ 190 (343)
T PRK08775 113 SLD--VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAV 190 (343)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHH
Confidence 853 346788899999999999998775 7999999999999999999999999999998654321110 000000
Q ss_pred -cc--------------------c---hhhhhhccccc-------HHHHHHHHHh---hhhcC------------CCChh
Q 024228 161 -IG--------------------Y---ESWVDFLLPKT-------ADALKVQFDI---ACYKL------------PTLPA 194 (270)
Q Consensus 161 -~~--------------------~---~~~~~~~~~~~-------~~~~~~~~~~---~~~~~------------~~~~~ 194 (270)
.. . ......+.... .......... ..... .....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T PRK08775 191 ALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHR 270 (343)
T ss_pred HcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcC
Confidence 00 0 00000000000 0000000000 00000 00001
Q ss_pred hhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecC-CCcceeecchHhHHHHHHHHHHhhh
Q 024228 195 FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK-AGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 195 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
..+.++.+|+|+++|++|.++|++..+.+.+.++++.+++++++ +||.+++|+|+++++.|.+||++..
T Consensus 271 ~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 271 VDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred CChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 12345669999999999999999999999988844899999985 9999999999999999999998764
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-30 Score=202.63 Aligned_cols=233 Identities=14% Similarity=0.146 Sum_probs=154.3
Q ss_pred EEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCC-C----hHHHHHHHHHHHH
Q 024228 33 ILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR-T----ASFQAECMAKGLR 107 (270)
Q Consensus 33 ~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~-~----~~~~~~~~~~~l~ 107 (270)
.+.+....+..++|+||++||++++.. .|...+..|+++|+|+++|+||||.|+.+.... + .+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQG-FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchh-HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 444433333346799999999999888 888888889888999999999999998654321 1 1235677888888
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-H-hhh-----------hc---c--ch-----
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-A-ALE-----------RI---G--YE----- 164 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-~-~~~-----------~~---~--~~----- 164 (270)
.++.++++|+||||||.+++.+|.++|++|+++|+++|.......... . ... .. . ..
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 888899999999999999999999999999999999876533211100 0 000 00 0 00
Q ss_pred ----------hhh-hhc---------ccccHHHHHHHHHhhh------------hc-----CCCChhhhhhhhheeeeEE
Q 024228 165 ----------SWV-DFL---------LPKTADALKVQFDIAC------------YK-----LPTLPAFVYKHILEKIHLL 207 (270)
Q Consensus 165 ----------~~~-~~~---------~~~~~~~~~~~~~~~~------------~~-----~~~~~~~~~~~~~~P~l~i 207 (270)
... ..+ .......+...+.... .. ........+.++.+|+++|
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 000 000 0000000100000000 00 0001112244456999999
Q ss_pred EcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhcc
Q 024228 208 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANG 267 (270)
Q Consensus 208 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~ 267 (270)
+|++|.+.+ .....+.+.....+++++++++||+++.|+|+++++.|.+|++.......
T Consensus 332 ~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 332 YGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred EeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 999998765 55555665554368899999999999999999999999999987765533
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=204.51 Aligned_cols=230 Identities=19% Similarity=0.182 Sum_probs=158.0
Q ss_pred CCeEEEEEecCC--CCCCceEEEeCCCCCcccc----------cHHHHH---HHh-hccceEEeecCCC--CCCCCCC--
Q 024228 30 PGTILNIWVPKK--TTKKHAVVLLHPFGFDGIL----------TWQFQV---LAL-AKTYEVYVPDFLF--FGSSVTD-- 89 (270)
Q Consensus 30 ~g~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~----------~~~~~~---~~l-~~~~~v~~~d~~g--~G~s~~~-- 89 (270)
+|.+++|...+. ..++++||++||++++... .|..++ ..| .++|+|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 678899988875 2346899999999997641 367665 244 4559999999999 5555421
Q ss_pred --C--------CCCChHHHHHHHHHHHHHhCCCc-eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--H
Q 024228 90 --R--------PDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--A 156 (270)
Q Consensus 90 --~--------~~~~~~~~~~~~~~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~ 156 (270)
. ..++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.......... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 1 13688999999999999999998 999999999999999999999999999999987654321100 0
Q ss_pred -hhhhc-------------------cch--------------hhhhhccccc---------------HHHHHH-----HH
Q 024228 157 -ALERI-------------------GYE--------------SWVDFLLPKT---------------ADALKV-----QF 182 (270)
Q Consensus 157 -~~~~~-------------------~~~--------------~~~~~~~~~~---------------~~~~~~-----~~ 182 (270)
..... ... .....+.... ...+.. +.
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFV 253 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHH
Confidence 00000 000 0000000000 000100 00
Q ss_pred Hh----------hhhcC-C-----CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE-----EecCCCc
Q 024228 183 DI----------ACYKL-P-----TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME-----SIEKAGH 241 (270)
Q Consensus 183 ~~----------~~~~~-~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH 241 (270)
.. ..... . ......+.++.+|+|+|+|++|.++|++.++.+.+.++ +.+++ +++++||
T Consensus 254 ~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~-~~~~~v~~~~i~~~~GH 332 (351)
T TIGR01392 254 DRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALP-AAGLRVTYVEIESPYGH 332 (351)
T ss_pred hhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHh-hcCCceEEEEeCCCCCc
Confidence 00 00000 0 00124455666999999999999999999999999998 66654 5578999
Q ss_pred ceeecchHhHHHHHHHHHH
Q 024228 242 LVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl~ 260 (270)
.+++++|+++++.|.+||+
T Consensus 333 ~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 333 DAFLVETDQVEELIRGFLR 351 (351)
T ss_pred chhhcCHHHHHHHHHHHhC
Confidence 9999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=201.93 Aligned_cols=229 Identities=24% Similarity=0.274 Sum_probs=163.3
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 104 (270)
.+.. ++..++|+..++ +++++|||+||++++.. .|..+.+.|.+.|+|+++|+||||.|.......+.+++++++.+
T Consensus 113 ~~~~-~~~~i~~~~~g~-~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 189 (371)
T PRK14875 113 KARI-GGRTVRYLRLGE-GDGTPVVLIHGFGGDLN-NWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLA 189 (371)
T ss_pred cceE-cCcEEEEecccC-CCCCeEEEECCCCCccc-hHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 3444 577788876665 44789999999999999 99999999988899999999999999766566889999999999
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh---Hhhhh---ccchhhhhh-cc------
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN---AALER---IGYESWVDF-LL------ 171 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~-~~------ 171 (270)
+++.++..+++++|||+||.+++.+|.++|+++.++|++++.......... ..... ......... ..
T Consensus 190 ~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (371)
T PRK14875 190 FLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVT 269 (371)
T ss_pred HHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCC
Confidence 999999899999999999999999999999999999999876432211000 00000 000000000 00
Q ss_pred c------------cc-HHHHHHHHHhhhhcC---CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEE
Q 024228 172 P------------KT-ADALKVQFDIACYKL---PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 172 ~------------~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
. .. ...+.... ...... .......+.++.+|+++++|++|.++|++..+.+ ..+.++.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~~ 344 (371)
T PRK14875 270 RQMVEDLLKYKRLDGVDDALRALA-DALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVHV 344 (371)
T ss_pred HHHHHHHHHHhccccHHHHHHHHH-HHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEEE
Confidence 0 00 00000000 000000 1111223445669999999999999998776543 33689999
Q ss_pred ecCCCcceeecchHhHHHHHHHHHHh
Q 024228 236 IEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 236 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++||++++++|+++++.|.+||++
T Consensus 345 ~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 345 LPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred eCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999999999999999999999975
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=197.30 Aligned_cols=242 Identities=16% Similarity=0.173 Sum_probs=163.6
Q ss_pred eeEEEeecCCeEEEEEecCC--CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChHH
Q 024228 22 TQRTIEIEPGTILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASF 97 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~ 97 (270)
....+..++|..+++....+ .+.+++||++||++++.. .|..+++.|++. |+|+++|+||||.|+.... ..+.+.
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 189 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDY 189 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHH
Confidence 34445555777887755443 245679999999999888 899999999876 9999999999999987543 257788
Q ss_pred HHHHHHHHHHHhCC----CceEEEEEchhHHHHHHHHhhCc---cccccEEEecccCCCCchhhh-Hhh----hh----c
Q 024228 98 QAECMAKGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMGLTESVSN-AAL----ER----I 161 (270)
Q Consensus 98 ~~~~~~~~l~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~~~-~~~----~~----~ 161 (270)
+.+|+.++++.+.. .+++++||||||.+++.++. +| ++++++|+.+|.......... ... .. .
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCC
Confidence 89999999888742 37999999999999997765 55 479999999987543321100 000 00 0
Q ss_pred cchhhhhh--cccccHHHHHHHHHhhhhcCCCC--------------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 162 GYESWVDF--LLPKTADALKVQFDIACYKLPTL--------------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 162 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
........ ............+........+. ....+.++.+|+|+++|++|.++|++.++.+++
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 00000000 00000000000000000000000 011234455999999999999999999999998
Q ss_pred Hhc-CCceEEEecCCCcceeec-chHhHHHHHHHHHHhhhhh
Q 024228 226 QVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 226 ~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~~ 265 (270)
.+. .+.+++++++++|..+.+ .++++.+.+.+||+.+...
T Consensus 349 ~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 349 EAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred hcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 865 357899999999999876 7899999999999987653
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=191.56 Aligned_cols=213 Identities=27% Similarity=0.371 Sum_probs=150.3
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC--CCChHHHHHH-HHHHHHHhCCCceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP--DRTASFQAEC-MAKGLRKLGVEKCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~-~~~~l~~~~~~~~~l~G~S~ 121 (270)
+|+||++||++++.. .|..+++.|++.|+|+++|+||+|.|+.+.. ..+.++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 478999999999999 9999999999669999999999999976542 4678888888 77788888888999999999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCCCchhhhHh-----------hhhccchhhhhh------------cccccH---
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-----------LERIGYESWVDF------------LLPKTA--- 175 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~------------~~~~~~--- 175 (270)
||.+++.+|.++|++|++++++++............ ............ ......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQAL 159 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHH
Confidence 999999999999999999999988654332111000 000000000000 000000
Q ss_pred ---------HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 176 ---------DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 176 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
......+..............+..+.+|+++++|++|..++ +..+.+.+..+ +.++++++++||+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~gH~~~~e 237 (251)
T TIGR03695 160 RAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP-NLTLVIIANAGHNIHLE 237 (251)
T ss_pred HHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC-CCcEEEEcCCCCCcCcc
Confidence 00000000000001111122344566999999999998764 56667777776 89999999999999999
Q ss_pred chHhHHHHHHHHHH
Q 024228 247 RPFVYNRQLKTILA 260 (270)
Q Consensus 247 ~~~~~~~~i~~fl~ 260 (270)
+|+++++.|.+|++
T Consensus 238 ~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 238 NPEAFAKILLAFLE 251 (251)
T ss_pred ChHHHHHHHHHHhC
Confidence 99999999999983
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=226.67 Aligned_cols=254 Identities=20% Similarity=0.276 Sum_probs=174.4
Q ss_pred hhhhhcccCCceeEEEeecC-CeE--EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCC
Q 024228 11 LLHGLLKLVGMTQRTIEIEP-GTI--LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSV 87 (270)
Q Consensus 11 ~~~~~~~~~~~~~~~i~~~~-g~~--l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~ 87 (270)
......+..++....+.+.. |.. ++|...+..+++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.
T Consensus 1334 ~~~~~~~~~~l~~~~~~v~~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~-~w~~~~~~L~~~~rVi~~Dl~G~G~S~ 1412 (1655)
T PLN02980 1334 VIVRTFKEEQVRTYELRVDVDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGE-DWIPIMKAISGSARCISIDLPGHGGSK 1412 (1655)
T ss_pred HHHHHhccCCCceEEEEEccCceEEEEEEEecCCCCCCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCC
Confidence 33444555667777776653 322 33444454345789999999999999 999999999888999999999999997
Q ss_pred CCC--------CCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh
Q 024228 88 TDR--------PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 88 ~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
... ..++.+.+++++.+++++++.++++|+||||||.+++.++.++|++|+++|++++..............
T Consensus 1413 ~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~ 1492 (1655)
T PLN02980 1413 IQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRS 1492 (1655)
T ss_pred CccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHh
Confidence 542 236788999999999999999999999999999999999999999999999998754332211110000
Q ss_pred -----------hccchhhhh-hcccc------cHHHHHHHH----------------HhhhhcCCCChhhhhhhhheeee
Q 024228 160 -----------RIGYESWVD-FLLPK------TADALKVQF----------------DIACYKLPTLPAFVYKHILEKIH 205 (270)
Q Consensus 160 -----------~~~~~~~~~-~~~~~------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~P~l 205 (270)
......... ++... ....+.... ..............+.++.+|+|
T Consensus 1493 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtL 1572 (1655)
T PLN02980 1493 AKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLL 1572 (1655)
T ss_pred hhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEE
Confidence 000000000 00000 000000000 00000001111234556669999
Q ss_pred EEEcCCCccCCHHHHHHHHHHhcC-----------CceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhc
Q 024228 206 LLWGENDKIFDMQVARNLKEQVGQ-----------NATMESIEKAGHLVNLERPFVYNRQLKTILASLVHAN 266 (270)
Q Consensus 206 ~i~g~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 266 (270)
+|+|++|..++ +.++.+.+.++. .+++++++++||++++|+|+++++.|.+||++....+
T Consensus 1573 lI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~ 1643 (1655)
T PLN02980 1573 LVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSS 1643 (1655)
T ss_pred EEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccC
Confidence 99999999875 666777777662 1589999999999999999999999999999876543
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-29 Score=191.44 Aligned_cols=232 Identities=18% Similarity=0.090 Sum_probs=152.9
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhc-cceEEeecCCCCCCCCCCCC--CCChHHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK-TYEVYVPDFLFFGSSVTDRP--DRTASFQ 98 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~--~~~~~~~ 98 (270)
...++...+|.+++|...++ +++++||++||++++.. .+ .+...+.. .|+|+++|+||||.|+.... ..+.+++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~-~~~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGN-PDGKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred cCCeEEcCCCcEEEEEECcC-CCCCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 45678888899999988765 34678999999887765 43 34444543 49999999999999986542 3567889
Q ss_pred HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-----------H----hhhhccc
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-----------A----ALERIGY 163 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-----------~----~~~~~~~ 163 (270)
++|+..++++++.++++++||||||.+++.++.++|++|+++|++++....+..... . .......
T Consensus 82 ~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T TIGR01249 82 VADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPE 161 (306)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCCh
Confidence 999999999999999999999999999999999999999999999876432211000 0 0000000
Q ss_pred h----hh----hhhcccccHH---HHHHHHHhhh----h----------------------------cCCCCh-----hh
Q 024228 164 E----SW----VDFLLPKTAD---ALKVQFDIAC----Y----------------------------KLPTLP-----AF 195 (270)
Q Consensus 164 ~----~~----~~~~~~~~~~---~~~~~~~~~~----~----------------------------~~~~~~-----~~ 195 (270)
. .. .......... .....+.... . ...... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (306)
T TIGR01249 162 NERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILD 241 (306)
T ss_pred hhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHH
Confidence 0 00 0000000000 0000000000 0 000000 01
Q ss_pred hhhhh-heeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 196 VYKHI-LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 196 ~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+.++ .+|+|+++|++|.++|.+.++.+++.++ +.++++++++||.++.+. ..+.|.+|+.
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~---~~~~i~~~~~ 303 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-EAELKVTNNAGHSAFDPN---NLAALVHALE 303 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCCCCCChH---HHHHHHHHHH
Confidence 12233 3899999999999999999999999998 899999999999986422 3345555544
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=185.88 Aligned_cols=243 Identities=19% Similarity=0.154 Sum_probs=169.3
Q ss_pred ceeEEEeecCCeEEEEEecCCCCC-CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCC-CCCCC-CChH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTK-KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV-TDRPD-RTAS 96 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~-~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~-~~~~~-~~~~ 96 (270)
..+..+...||..++|+......+ ..+||++||++.+.. .|..++..|... |.|+++|+||||.|. ...+. .++.
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~ 87 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFA 87 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHH
Confidence 445566666999999987766433 389999999999999 999999999988 999999999999997 33333 5688
Q ss_pred HHHHHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc--hhhh-Hhhhhccchhhhh-
Q 024228 97 FQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE--SVSN-AALERIGYESWVD- 168 (270)
Q Consensus 97 ~~~~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~--~~~~-~~~~~~~~~~~~~- 168 (270)
++.+|+.++++... ..+++++||||||.+++.++.+++.+|+++|+.+|...... .... .............
T Consensus 88 ~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~ 167 (298)
T COG2267 88 DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPK 167 (298)
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccc
Confidence 99999999998875 35899999999999999999999999999999999987663 1110 0000000000000
Q ss_pred ---------hcccccHH---HHHHHHHhhh----------------hcCCCChhhhhhhhheeeeEEEcCCCccCC-HHH
Q 024228 169 ---------FLLPKTAD---ALKVQFDIAC----------------YKLPTLPAFVYKHILEKIHLLWGENDKIFD-MQV 219 (270)
Q Consensus 169 ---------~~~~~~~~---~~~~~~~~~~----------------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~ 219 (270)
........ ...+.+.... ...............+|+|+++|++|.+++ .+.
T Consensus 168 ~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~ 247 (298)
T COG2267 168 LPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEG 247 (298)
T ss_pred cccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHH
Confidence 00000000 0001110000 000000011122233999999999999999 688
Q ss_pred HHHHHHHhc-CCceEEEecCCCcceeecc-h--HhHHHHHHHHHHhhhh
Q 024228 220 ARNLKEQVG-QNATMESIEKAGHLVNLER-P--FVYNRQLKTILASLVH 264 (270)
Q Consensus 220 ~~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~--~~~~~~i~~fl~~~~~ 264 (270)
..++.+... +++++++++|+.|..+.|. . +++.+.+.+|+.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 248 LARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 887877766 4679999999999998864 3 6788999999987643
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-28 Score=177.29 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=169.1
Q ss_pred ceeEEEeecCCeEEEE--EecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CCh
Q 024228 21 MTQRTIEIEPGTILNI--WVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~--~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~ 95 (270)
....++..++|..+.. |.+.+ .+++..|+++||++......|+.++..|+.. |.|+++|++|||.|++.... .++
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~ 106 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSF 106 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcH
Confidence 3566677778988875 44433 2556789999999988743888899999988 99999999999999977655 788
Q ss_pred HHHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc---chhh
Q 024228 96 SFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG---YESW 166 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~ 166 (270)
+..++|+....+... ..+.+++||||||.+++.++.+.|+..+++|+++|.....+.......-... ....
T Consensus 107 d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~l 186 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKL 186 (313)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHh
Confidence 899999998888642 2478999999999999999999999999999999987654433111100000 0000
Q ss_pred h-hhc-cccc--------HHHHHHHHHhhhhcC---------------CCChhhhhhhhheeeeEEEcCCCccCCHHHHH
Q 024228 167 V-DFL-LPKT--------ADALKVQFDIACYKL---------------PTLPAFVYKHILEKIHLLWGENDKIFDMQVAR 221 (270)
Q Consensus 167 ~-~~~-~~~~--------~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 221 (270)
. .+. .+.. ....++......... ...-...+.+..+|.+++||+.|.+..++.++
T Consensus 187 iP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk 266 (313)
T KOG1455|consen 187 IPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSK 266 (313)
T ss_pred CCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHH
Confidence 0 000 0000 000111111000000 00112223344499999999999999999999
Q ss_pred HHHHHhc-CCceEEEecCCCcceee----cchHhHHHHHHHHHHhh
Q 024228 222 NLKEQVG-QNATMESIEKAGHLVNL----ERPFVYNRQLKTILASL 262 (270)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 262 (270)
.+++... .+.++.++||+-|.... ++-+.+...|.+||++.
T Consensus 267 ~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 267 ELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999887 68999999999999985 34466788899999764
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=178.64 Aligned_cols=232 Identities=15% Similarity=0.166 Sum_probs=155.9
Q ss_pred eeEEEeecCCeEEEEEecCCC----CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCCCCCCh
Q 024228 22 TQRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRTA 95 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~~~~~~ 95 (270)
..+.+.+++|..|+.|...+. .+.++||+.||+++... .+..+++.|+++ |.|+.+|.||+ |.|++.....+.
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 346678889999987665542 34588999999999887 799999999998 99999999988 999876555554
Q ss_pred HHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhhh
Q 024228 96 SFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVDF 169 (270)
Q Consensus 96 ~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 169 (270)
.....|+.++++.+ +.++++|+||||||.+|+.+|... .++++|+.+|................ ........
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~ 166 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPED 166 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcccccCcccccccc
Confidence 44567776666655 456899999999999997777643 39999999998775432221111000 00000000
Q ss_pred c-ccccHHHHHHHHHhhhhcC----CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcce
Q 024228 170 L-LPKTADALKVQFDIACYKL----PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLV 243 (270)
Q Consensus 170 ~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 243 (270)
. ..........++.. .+.. ...+.....++.+|+|+|||++|.+||.+.++.+++.++ .++++++++|++|.+
T Consensus 167 ~d~~g~~l~~~~f~~~-~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l 245 (307)
T PRK13604 167 LDFEGHNLGSEVFVTD-CFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL 245 (307)
T ss_pred cccccccccHHHHHHH-HHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcccc
Confidence 0 00000000122211 1111 112234455566999999999999999999999999886 579999999999988
Q ss_pred eecchHhHHHHHHHHHHhh
Q 024228 244 NLERPFVYNRQLKTILASL 262 (270)
Q Consensus 244 ~~~~~~~~~~~i~~fl~~~ 262 (270)
. +++- .+++|.++.
T Consensus 246 ~-~~~~----~~~~~~~~~ 259 (307)
T PRK13604 246 G-ENLV----VLRNFYQSV 259 (307)
T ss_pred C-cchH----HHHHHHHHH
Confidence 4 4432 344555544
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=166.75 Aligned_cols=211 Identities=22% Similarity=0.286 Sum_probs=154.0
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEEc
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL---GVEKCTLVGVS 120 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S 120 (270)
+.+||++||+.|+.. ..+.+.+.|.++ |.|.++.+||||.........+.++|.+++.+..+.+ +.+.|.++|.|
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 589999999999999 999999999999 9999999999998876556688888888877766655 67899999999
Q ss_pred hhHHHHHHHHhhCccccccEEEecccCCCCchh--hhHhhhhccchhhhhhcccccHHHHHHHHHhhhh----------c
Q 024228 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV--SNAALERIGYESWVDFLLPKTADALKVQFDIACY----------K 188 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 188 (270)
|||.+++.+|..+| ++++|.++++....... ........ ...+.........+.+.+..... .
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~---~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~ 168 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYF---RNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKK 168 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHH---HHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHH
Confidence 99999999999998 99999999876532211 11111100 00111111111111111111100 0
Q ss_pred CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeec-chHhHHHHHHHHHHh
Q 024228 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILAS 261 (270)
Q Consensus 189 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 261 (270)
........+..+..|++++.|.+|+++|.+.++.+.+... .+.++.+++++||....+ ..+.+.+.+..||+.
T Consensus 169 ~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 169 LIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 0001123345555999999999999999999999999876 568999999999999884 567899999999963
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-28 Score=190.58 Aligned_cols=244 Identities=13% Similarity=0.110 Sum_probs=157.6
Q ss_pred CceeEEEeecCCeEEEE-Eec----CCCCCCceEEEeCCCCCcccccH-HHHHHHhhc-cceEEeecCCCCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNI-WVP----KKTTKKHAVVLLHPFGFDGILTW-QFQVLALAK-TYEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~-~~~----~~~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~ 92 (270)
..++..+.++||..+.+ |.. .....+|+||++||+++++...| ..++..+.+ +|+|+++|+||||.|......
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~ 149 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ 149 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC
Confidence 35677888889988876 322 12245789999999988765234 456555544 499999999999999865444
Q ss_pred CChHHHHHHHHHHHHHhCC----CceEEEEEchhHHHHHHHHhhCccc--cccEEEecccCCCCchh---hh---Hhhhh
Q 024228 93 RTASFQAECMAKGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVTCSVMGLTESV---SN---AALER 160 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~i~~~~~~~~~~~~---~~---~~~~~ 160 (270)
.....+.+|+.++++++.. .+++++||||||.+++.++.++|++ |.++++++++....... .. .....
T Consensus 150 ~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~ 229 (388)
T PLN02511 150 FYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDK 229 (388)
T ss_pred EEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHH
Confidence 3445667888888888754 5899999999999999999999987 88888887665421000 00 00000
Q ss_pred cc---chhhhh----hc-------------ccccHHHHHHHHHhhhhcC--------CCChhhhhhhhheeeeEEEcCCC
Q 024228 161 IG---YESWVD----FL-------------LPKTADALKVQFDIACYKL--------PTLPAFVYKHILEKIHLLWGEND 212 (270)
Q Consensus 161 ~~---~~~~~~----~~-------------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~P~l~i~g~~D 212 (270)
.. ...... .+ .......+...+....... .......+.++.+|+|+|+|++|
T Consensus 230 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dD 309 (388)
T PLN02511 230 ALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAAND 309 (388)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCC
Confidence 00 000000 00 0000011111111100000 00112345566699999999999
Q ss_pred ccCCHHHH-HHHHHHhcCCceEEEecCCCcceeecchHh------HHHHHHHHHHhhhh
Q 024228 213 KIFDMQVA-RNLKEQVGQNATMESIEKAGHLVNLERPFV------YNRQLKTILASLVH 264 (270)
Q Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~~~ 264 (270)
+++|.+.. ....+..+ ++++++++++||..++|+|+. +.+.+.+||+....
T Consensus 310 pi~p~~~~~~~~~~~~p-~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 310 PIAPARGIPREDIKANP-NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CcCCcccCcHhHHhcCC-CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99987654 34555566 899999999999999999865 58999999987654
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-27 Score=186.48 Aligned_cols=235 Identities=11% Similarity=0.079 Sum_probs=154.6
Q ss_pred ceeEEEeecCCeEEEEE--ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 21 MTQRTIEIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
++...+...+|..+..+ .+...++.|+||+.||+.+.....|..+++.|+++ |+|+++|+||+|.|.......+...
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~ 247 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSL 247 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHH
Confidence 56666776677667543 33332456777777777765433788888888887 9999999999999975433334444
Q ss_pred HHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh--hHhhhhccchhhhhhc--
Q 024228 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS--NAALERIGYESWVDFL-- 170 (270)
Q Consensus 98 ~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-- 170 (270)
...++.+++... +.++++++|||+||++++.+|...|++|+++|+++++........ ...............+
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~ 327 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGM 327 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCC
Confidence 455566666554 567899999999999999999999999999999988754210000 0000000000000000
Q ss_pred ccccHHHHHHHHHhhhhcCCCChhh-hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchH
Q 024228 171 LPKTADALKVQFDIACYKLPTLPAF-VYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 249 (270)
.......+...+..... .... ...++.+|+|+|+|++|+++|.+.++.+.+..+ +.++++++++ ++.+.++
T Consensus 328 ~~~~~~~l~~~l~~~sl----~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-~~~l~~i~~~---~~~e~~~ 399 (414)
T PRK05077 328 HDASDEALRVELNRYSL----KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-DGKLLEIPFK---PVYRNFD 399 (414)
T ss_pred CCCChHHHHHHhhhccc----hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-CCeEEEccCC---CccCCHH
Confidence 01111222221111110 0111 114566999999999999999999999888887 8999999985 4557999
Q ss_pred hHHHHHHHHHHhhh
Q 024228 250 VYNRQLKTILASLV 263 (270)
Q Consensus 250 ~~~~~i~~fl~~~~ 263 (270)
++.+.+.+||++..
T Consensus 400 ~~~~~i~~wL~~~l 413 (414)
T PRK05077 400 KALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=167.15 Aligned_cols=239 Identities=17% Similarity=0.127 Sum_probs=174.1
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
...+..+.+ +|.+++|...|. +...|++++|.-++....|.+.+..+.+. +.++++|.||+|.|.++...+..+.
T Consensus 20 ~~te~kv~v-ng~ql~y~~~G~--G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~f 96 (277)
T KOG2984|consen 20 DYTESKVHV-NGTQLGYCKYGH--GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQF 96 (277)
T ss_pred hhhhheeee-cCceeeeeecCC--CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHH
Confidence 345666777 799999998887 45679999998887776888877766655 9999999999999998877766655
Q ss_pred H---HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhh-------
Q 024228 98 Q---AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWV------- 167 (270)
Q Consensus 98 ~---~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------- 167 (270)
. +++...+++.++.+++.++|+|-||..|+.+|+++++.|.++|++++....................+.
T Consensus 97 f~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~ 176 (277)
T KOG2984|consen 97 FMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPY 176 (277)
T ss_pred HHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchH
Confidence 5 555677888999999999999999999999999999999999999887654332211111111111111
Q ss_pred -hhcccccHH-HHHHHHHh----hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCc
Q 024228 168 -DFLLPKTAD-ALKVQFDI----ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 241 (270)
Q Consensus 168 -~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 241 (270)
....++... ...++... .......+-...+.++.||+||++|+.|++++...+.-+....+ .+++.+++.++|
T Consensus 177 e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~-~a~~~~~peGkH 255 (277)
T KOG2984|consen 177 EDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS-LAKVEIHPEGKH 255 (277)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc-cceEEEccCCCc
Confidence 111111111 11111111 11111223344556666999999999999999888888887776 899999999999
Q ss_pred ceeecchHhHHHHHHHHHHhh
Q 024228 242 LVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.+++..+++|+..+.+||++.
T Consensus 256 n~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 256 NFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ceeeechHHHHHHHHHHHhcc
Confidence 999999999999999999753
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=196.91 Aligned_cols=231 Identities=16% Similarity=0.139 Sum_probs=154.7
Q ss_pred cCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC--CCCChHHHHHHHHHHH
Q 024228 29 EPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTASFQAECMAKGL 106 (270)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~l 106 (270)
.+|.+++|+..++ .++|+|||+||++++.. .|..+.+.|.+.|+|+++|+||||.|+... ..++.+++++|+.+++
T Consensus 10 ~~g~~l~~~~~g~-~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i 87 (582)
T PRK05855 10 SDGVRLAVYEWGD-PDRPTVVLVHGYPDNHE-VWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVI 87 (582)
T ss_pred eCCEEEEEEEcCC-CCCCeEEEEcCCCchHH-HHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 4899999988875 34789999999999998 999999999777999999999999998654 3478999999999999
Q ss_pred HHhCCCc-eEEEEEchhHHHHHHHHhhC--ccccccEEEecccCCCCc-hhhh------------Hhhhhccchh-----
Q 024228 107 RKLGVEK-CTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMGLTE-SVSN------------AALERIGYES----- 165 (270)
Q Consensus 107 ~~~~~~~-~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~~~~-~~~~------------~~~~~~~~~~----- 165 (270)
++++..+ ++|+||||||.+++.++.+. ++++..++.++++..... .... ..........
T Consensus 88 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (582)
T PRK05855 88 DAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLF 167 (582)
T ss_pred HHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHH
Confidence 9998765 99999999999998887762 344555444443211000 0000 0000000000
Q ss_pred ----hhhhc-ccccHHHHHHHHHhh----------------------hhcC---CCChhhhhhhhheeeeEEEcCCCccC
Q 024228 166 ----WVDFL-LPKTADALKVQFDIA----------------------CYKL---PTLPAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 166 ----~~~~~-~~~~~~~~~~~~~~~----------------------~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
..... ............... .+.. ..........+.+|+++|+|++|.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v 247 (582)
T PRK05855 168 HLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYV 247 (582)
T ss_pred hCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCccc
Confidence 00000 000000000000000 0000 00000011224599999999999999
Q ss_pred CHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 216 DMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
|++..+.+.+.++ +.++++++ +||+++.++|+++.+.|.+|+.+..
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 248 RPALYDDLSRWVP-RLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CHHHhccccccCC-cceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 9999988888776 77888886 6999999999999999999998754
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-26 Score=177.16 Aligned_cols=233 Identities=12% Similarity=0.147 Sum_probs=151.5
Q ss_pred eecCCeEEEEEecCCCCCCceEEEeCCCCCcccccH-------------------------HHHHHHhhcc-ceEEeecC
Q 024228 27 EIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTW-------------------------QFQVLALAKT-YEVYVPDF 80 (270)
Q Consensus 27 ~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~-------------------------~~~~~~l~~~-~~v~~~d~ 80 (270)
...||..|+++...+..++.+|+++||++.+....| ..+++.|.+. |.|+++|+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 445888888766554456789999999998875111 4578899887 99999999
Q ss_pred CCCCCCCCCCC---C-CChHHHHHHHHHHHHHhC------------------------CCceEEEEEchhHHHHHHHHhh
Q 024228 81 LFFGSSVTDRP---D-RTASFQAECMAKGLRKLG------------------------VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 81 ~g~G~s~~~~~---~-~~~~~~~~~~~~~l~~~~------------------------~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
||||.|..... . .+++++++|+.++++.+. ..+++++||||||.+++.++.+
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 99999985422 1 478889999998887642 2479999999999999999876
Q ss_pred Ccc--------ccccEEEecccCCCCch-------hh---hHhhh---hccchh-hhh-hcccccHHHHHHHHHhhhhcC
Q 024228 133 YPD--------LVESMVVTCSVMGLTES-------VS---NAALE---RIGYES-WVD-FLLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 133 ~p~--------~v~~~i~~~~~~~~~~~-------~~---~~~~~---~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 189 (270)
+++ .++++|+++|....... .. ..... ...... ... ...... ....+.+....+..
T Consensus 163 ~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 163 LGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKS-PYVNDIIKFDKFRY 241 (332)
T ss_pred hccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccC-hhhhhHHhcCcccc
Confidence 542 58999988876432110 00 00000 000000 000 000000 00000000000000
Q ss_pred -CCC--------------hhhhhhhh--heeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeecc-hHh
Q 024228 190 -PTL--------------PAFVYKHI--LEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLER-PFV 250 (270)
Q Consensus 190 -~~~--------------~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~~~ 250 (270)
... .......+ .+|+|+++|++|.+++++.++.+++... ++.+++++++++|.++.|. .++
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHH
Confidence 000 00112222 3899999999999999999998887764 3789999999999999875 688
Q ss_pred HHHHHHHHHH
Q 024228 251 YNRQLKTILA 260 (270)
Q Consensus 251 ~~~~i~~fl~ 260 (270)
+.+.|.+||+
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 9999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-26 Score=167.22 Aligned_cols=222 Identities=18% Similarity=0.178 Sum_probs=159.2
Q ss_pred ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----C
Q 024228 38 VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG----V 111 (270)
Q Consensus 38 ~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~----~ 111 (270)
...+....|+++++||+.++.. .|..+...|++. ..++++|.|.||.|+.. ...+.+.+++|+..+|+..+ .
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGSTRL 122 (315)
T ss_pred cccccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHccccccc
Confidence 3344457899999999999999 999999999988 89999999999999854 34568999999999999884 5
Q ss_pred CceEEEEEchhH-HHHHHHHhhCccccccEEEecccCCCCchhh---hHhhhhc---cch--------------------
Q 024228 112 EKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGLTESVS---NAALERI---GYE-------------------- 164 (270)
Q Consensus 112 ~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---~~~~~~~---~~~-------------------- 164 (270)
.++.++|||||| .+++..+...|+.+..+|+++..+...+... ......+ ...
T Consensus 123 ~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d 202 (315)
T KOG2382|consen 123 DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFD 202 (315)
T ss_pred CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcc
Confidence 689999999999 7788888889999999999876653111110 0000000 000
Q ss_pred -----hhhhhcc----------cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC
Q 024228 165 -----SWVDFLL----------PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ 229 (270)
Q Consensus 165 -----~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 229 (270)
.....+. ......+.+++........|..... ..+..||+++.|.++.+++.+.-.++...++
T Consensus 203 ~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp- 280 (315)
T KOG2382|consen 203 NLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP- 280 (315)
T ss_pred hHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcChhHHHHHHHhcc-
Confidence 0000000 0001112222221111111111111 3344899999999999999999999999998
Q ss_pred CceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 230 NATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.+++++++++||+.+.|+|+++.+.|.+|+.+..
T Consensus 281 ~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 281 NVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred chheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 8999999999999999999999999999997653
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-24 Score=169.80 Aligned_cols=231 Identities=16% Similarity=0.161 Sum_probs=156.8
Q ss_pred CeEEEEEecCCC--CCCceEEEeCCCCCccc------------ccHHHHH---HHhhcc-ceEEeecCCCCCCCCCC---
Q 024228 31 GTILNIWVPKKT--TKKHAVVLLHPFGFDGI------------LTWQFQV---LALAKT-YEVYVPDFLFFGSSVTD--- 89 (270)
Q Consensus 31 g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~------------~~~~~~~---~~l~~~-~~v~~~d~~g~G~s~~~--- 89 (270)
..++.|...|.. ...++||+.|++.+++. ..|..++ ..|..+ |-||++|..|.|.|..+
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 356788888763 34589999999988642 0266554 345555 99999999988753211
Q ss_pred ------------------CCCCChHHHHHHHHHHHHHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 90 ------------------RPDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 90 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
.+.++.+++++++.+++++++++++. ++||||||++++.+|.++|++|+++|++++.....
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~ 199 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQND 199 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCC
Confidence 12368899999999999999999986 99999999999999999999999999998765433
Q ss_pred chh-h--hH-hhhhc-------------------cch--------------hhhhhcccc---c---------HHHHHHH
Q 024228 151 ESV-S--NA-ALERI-------------------GYE--------------SWVDFLLPK---T---------ADALKVQ 181 (270)
Q Consensus 151 ~~~-~--~~-~~~~~-------------------~~~--------------~~~~~~~~~---~---------~~~~~~~ 181 (270)
... . .. ....+ +.. .+...+... . ......+
T Consensus 200 ~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~y 279 (389)
T PRK06765 200 AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKE 279 (389)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHH
Confidence 221 0 00 00000 000 000000000 0 0000011
Q ss_pred HHhh---------------------hhc--C-CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 182 FDIA---------------------CYK--L-PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 182 ~~~~---------------------~~~--~-~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
+... .+. . .......+..+.+|+|+|+|++|.++|++..+.+.+.++ .+++++
T Consensus 280 l~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~ 359 (389)
T PRK06765 280 INKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVY 359 (389)
T ss_pred HHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEE
Confidence 1000 000 0 001233455566999999999999999999999998886 268999
Q ss_pred EecC-CCcceeecchHhHHHHHHHHHHh
Q 024228 235 SIEK-AGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 235 ~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++ +||..++++|+++++.|.+||++
T Consensus 360 ~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 360 EIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9985 89999999999999999999975
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-24 Score=166.51 Aligned_cols=242 Identities=14% Similarity=0.084 Sum_probs=148.2
Q ss_pred ceeEEEeecCCeEEEEEec-C--CCCCCceEEEeCCCCCcccc-cHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh
Q 024228 21 MTQRTIEIEPGTILNIWVP-K--KTTKKHAVVLLHPFGFDGIL-TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~-~--~~~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
.+.+.++++||..+.+... . ...++|+||++||++++... .+..+++.|.+. |+|+++|+||||.+.........
T Consensus 31 ~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~ 110 (324)
T PRK10985 31 PYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYH 110 (324)
T ss_pred cceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceEC
Confidence 3566788889987765322 2 22357899999999887551 345678888887 99999999999987543222111
Q ss_pred HHHHHHHHHHH----HHhCCCceEEEEEchhHHHHHHHHhhCccc--cccEEEecccCCCCchhh------hHhhhhccc
Q 024228 96 SFQAECMAKGL----RKLGVEKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVTCSVMGLTESVS------NAALERIGY 163 (270)
Q Consensus 96 ~~~~~~~~~~l----~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~i~~~~~~~~~~~~~------~~~~~~~~~ 163 (270)
....+|+..++ +.++..+++++||||||.+++.++.++++. +.++|+++++........ .........
T Consensus 111 ~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~ 190 (324)
T PRK10985 111 SGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLL 190 (324)
T ss_pred CCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHH
Confidence 11234444433 345667899999999999988888877543 889999988765321110 000000000
Q ss_pred hhh-------hhhcc---cccHHHH---------HHHHHhhh--hc------CCCChhhhhhhhheeeeEEEcCCCccCC
Q 024228 164 ESW-------VDFLL---PKTADAL---------KVQFDIAC--YK------LPTLPAFVYKHILEKIHLLWGENDKIFD 216 (270)
Q Consensus 164 ~~~-------~~~~~---~~~~~~~---------~~~~~~~~--~~------~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 216 (270)
... ..... ......+ ...+.... +. ........+.++.+|+++|+|++|++++
T Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~ 270 (324)
T PRK10985 191 NLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMT 270 (324)
T ss_pred HHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCC
Confidence 000 00000 0000000 00000000 00 0111223445566999999999999999
Q ss_pred HHHHHHHHHHhcCCceEEEecCCCcceeecch-----HhHHHHHHHHHHhhh
Q 024228 217 MQVARNLKEQVGQNATMESIEKAGHLVNLERP-----FVYNRQLKTILASLV 263 (270)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~~ 263 (270)
++....+.+..+ +.++++++++||+.+++.. ....+.+.+|+....
T Consensus 271 ~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 271 HEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred hhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 888877766665 8899999999999998642 356778888886553
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=160.35 Aligned_cols=225 Identities=11% Similarity=0.039 Sum_probs=139.0
Q ss_pred CCeEEEE--EecCCCCCCceEEEeCCCCC----cccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 30 PGTILNI--WVPKKTTKKHAVVLLHPFGF----DGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 30 ~g~~l~~--~~~~~~~~~~~vv~~hG~~~----~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
+|..+.- ..+.+ .++++||++||++. +.. .|..+++.|++. |.|+++|+||||.|.... .+.+.+.+|+
T Consensus 10 ~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~ 85 (274)
T TIGR03100 10 EGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADI 85 (274)
T ss_pred CCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHH
Confidence 5666543 33332 34567888887653 223 466778899887 999999999999987542 4667778888
Q ss_pred HHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc-----hhh-hhhcc
Q 024228 103 AKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY-----ESW-VDFLL 171 (270)
Q Consensus 103 ~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~ 171 (270)
.++++.+ +.++++++|||+||.+++.+|.. +++|+++|+++|.................. ... .....
T Consensus 86 ~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (274)
T TIGR03100 86 AAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWRKLLS 164 (274)
T ss_pred HHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHHHhcC
Confidence 8888776 45679999999999999999765 457999999998754322111111110000 000 00010
Q ss_pred ccc-HHHHHHHHHh----h-hhcC----CCChh---hhhhhhheeeeEEEcCCCccCCHHHH------HHHHHHhc-CCc
Q 024228 172 PKT-ADALKVQFDI----A-CYKL----PTLPA---FVYKHILEKIHLLWGENDKIFDMQVA------RNLKEQVG-QNA 231 (270)
Q Consensus 172 ~~~-~~~~~~~~~~----~-~~~~----~~~~~---~~~~~~~~P~l~i~g~~D~~~~~~~~------~~~~~~~~-~~~ 231 (270)
... .......+.. . .... ..... ..+..+.+|+++++|+.|...+ ... ..+.+.+. .++
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 165 GEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred CCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCe
Confidence 000 0000111111 0 0000 00111 1223445899999999998864 222 44555452 389
Q ss_pred eEEEecCCCcceeec-chHhHHHHHHHHHH
Q 024228 232 TMESIEKAGHLVNLE-RPFVYNRQLKTILA 260 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 260 (270)
+++.+++++|++..+ .++++.+.|.+||+
T Consensus 244 ~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 244 ERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred EEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 999999999988554 45889999999996
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-25 Score=153.22 Aligned_cols=221 Identities=14% Similarity=0.146 Sum_probs=161.9
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
++..+.+.|..+++-|...++.+.|+++++|+..++.+ .....+..+-.+ .+|+.+++||+|.|++.+.+... .
T Consensus 55 e~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL---~ 130 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGL---K 130 (300)
T ss_pred eEEEEEcCcceeEeeeeecccCCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCCCccccce---e
Confidence 45556667899997665556668999999999999998 777777665554 89999999999999977655433 3
Q ss_pred HHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 100 ECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 100 ~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
-|-.++++.+ +..+++++|.|.||.+|..+|+++.+++.++|+-+.+...+....... .+-
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v-------------~p~ 197 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV-------------FPF 197 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee-------------ccc
Confidence 3444455544 456899999999999999999999999999999988766432221110 000
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHH
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYN 252 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~ 252 (270)
..+.+....+...|...........|.|++.|.+|.+||+.+.+.+++..+ ...++.++|++.|...+-. +-+.
T Consensus 198 ----~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYf 272 (300)
T KOG4391|consen 198 ----PMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYF 272 (300)
T ss_pred ----hhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-ccHH
Confidence 012222222333333334444455899999999999999999999999988 4678999999999987644 3477
Q ss_pred HHHHHHHHhhhh
Q 024228 253 RQLKTILASLVH 264 (270)
Q Consensus 253 ~~i~~fl~~~~~ 264 (270)
+.|.+||.+...
T Consensus 273 q~i~dFlaE~~~ 284 (300)
T KOG4391|consen 273 QAIEDFLAEVVK 284 (300)
T ss_pred HHHHHHHHHhcc
Confidence 999999987653
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-24 Score=167.03 Aligned_cols=245 Identities=18% Similarity=0.209 Sum_probs=158.8
Q ss_pred CCceeEEEeecCCeEEEEEecCCC------CCCceEEEeCCCCCcccccHH------HHHHHhhcc-ceEEeecCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKT------TKKHAVVLLHPFGFDGILTWQ------FQVLALAKT-YEVYVPDFLFFGS 85 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~------~~~~~vv~~hG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~g~G~ 85 (270)
-..+++.++++||..|.+...... .++|+|+++||+++++. .|. .++..|+++ |+|+++|+||++.
T Consensus 42 y~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 42 YSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCccccccccccc
Confidence 357899999999999987553211 23689999999998887 773 345567776 9999999999876
Q ss_pred CCCC-------C--CCCChHHHH-HHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCC
Q 024228 86 SVTD-------R--PDRTASFQA-ECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGL 149 (270)
Q Consensus 86 s~~~-------~--~~~~~~~~~-~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~ 149 (270)
|... . .+++.++++ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +|+.+++++|....
T Consensus 121 s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 121 SYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred ccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 5321 1 135777777 7999999986 347899999999999998555 5675 68888888887543
Q ss_pred Cc---hhhhH--------hhhhccchh----------hhhh--------------cc--------------------ccc
Q 024228 150 TE---SVSNA--------ALERIGYES----------WVDF--------------LL--------------------PKT 174 (270)
Q Consensus 150 ~~---~~~~~--------~~~~~~~~~----------~~~~--------------~~--------------------~~~ 174 (270)
.. ..... .....+... .... +. ..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS 279 (395)
T PLN02872 200 DHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSS 279 (395)
T ss_pred ccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcch
Confidence 21 11000 000000000 0000 00 000
Q ss_pred HHH---HHHHHHhhhhcC--------------CCChhhhhhhh--heeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEE
Q 024228 175 ADA---LKVQFDIACYKL--------------PTLPAFVYKHI--LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 175 ~~~---~~~~~~~~~~~~--------------~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
... +.+.+....++. ...|.-.+.++ .+|+++++|++|.+++++.++.+.+.++...+++.
T Consensus 280 ~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~ 359 (395)
T PLN02872 280 VKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLY 359 (395)
T ss_pred HHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEE
Confidence 000 001111110100 01111112222 16999999999999999999999999984368889
Q ss_pred ecCCCccee---ecchHhHHHHHHHHHHhhhhh
Q 024228 236 IEKAGHLVN---LERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 236 ~~~~gH~~~---~~~~~~~~~~i~~fl~~~~~~ 265 (270)
+++++|..+ .+.++++.+.|.+|+++....
T Consensus 360 l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 360 LENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred cCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 999999744 388999999999999876543
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-23 Score=150.58 Aligned_cols=183 Identities=18% Similarity=0.096 Sum_probs=125.5
Q ss_pred ceEEEeCCCCCcccccHHH--HHHHhhc---cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc
Q 024228 46 HAVVLLHPFGFDGILTWQF--QVLALAK---TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~--~~~~l~~---~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S 120 (270)
|+||++||++++.. .|.. +.+.+.+ +|+|+++|+||++ ++.++++.+++++++.++++++|||
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 68999999999999 8874 4466654 4999999999884 4578899999999998999999999
Q ss_pred hhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhh
Q 024228 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (270)
+||.+++.+|.++|. .+|+++|........ .... .... .. .......--.+++....... ... +. +
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~~-~~~~---~~~~-~~-~~~~~~~~~~~~~~d~~~~~---~~~-i~-~ 135 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPFELL-TDYL---GENE-NP-YTGQQYVLESRHIYDLKVMQ---IDP-LE-S 135 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHHHHH-HHhc---CCcc-cc-cCCCcEEEcHHHHHHHHhcC---Ccc-CC-C
Confidence 999999999999983 468888865521111 1110 0000 00 00000000011111111000 011 11 4
Q ss_pred heeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 201 LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 201 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+|+++++|++|+++|++.+.++++. ++.++++|++|.+ ...+++.+.+.+|++
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 48899999999999999999999875 3567889999998 444778899999875
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-23 Score=155.48 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=129.9
Q ss_pred EEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh-------HHHHHHHHH
Q 024228 34 LNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA-------SFQAECMAK 104 (270)
Q Consensus 34 l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~-------~~~~~~~~~ 104 (270)
++|+..+. .++.|+||++||++++.. .|..++..|++. |.|+++|+||+|.+......... ....+|+.+
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 44444332 234689999999999988 899999999887 99999999999976432211111 112344444
Q ss_pred HHHH------hCCCceEEEEEchhHHHHHHHHhhCccccccEE-EecccCCCCchhhhHhhhhccchhhhhhcccccHHH
Q 024228 105 GLRK------LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV-VTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (270)
Q Consensus 105 ~l~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
+++. ++.++++++|||+||.+++.++.++|+ +.+.+ ++++... .. ....... .... ..+.....
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~----~~~~--~~~~~~~~ 164 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW-VKCVASLMGSGYF-TS-LARTLFP----PLIP--ETAAQQAE 164 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC-eeEEEEeeCcHHH-HH-HHHHhcc----cccc--cccccHHH
Confidence 4443 245689999999999999999998886 44444 3332211 00 0000000 0000 00001111
Q ss_pred HHHHHHhhhhcCCCChhhhhhhh-heeeeEEEcCCCccCCHHHHHHHHHHhcC-----CceEEEecCCCcceeecchHhH
Q 024228 178 LKVQFDIACYKLPTLPAFVYKHI-LEKIHLLWGENDKIFDMQVARNLKEQVGQ-----NATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~ 251 (270)
......... .......+.++ .+|+|+++|++|.++|++.++.+.+.+.. +.+++.++++||... + ..
T Consensus 165 ~~~~~~~~~---~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~ 237 (249)
T PRK10566 165 FNNIVAPLA---EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EA 237 (249)
T ss_pred HHHHHHHHh---hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HH
Confidence 111111100 11112223343 48999999999999999999999988762 257788999999863 3 35
Q ss_pred HHHHHHHHHhh
Q 024228 252 NRQLKTILASL 262 (270)
Q Consensus 252 ~~~i~~fl~~~ 262 (270)
.+.+.+||++.
T Consensus 238 ~~~~~~fl~~~ 248 (249)
T PRK10566 238 LDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHhh
Confidence 68888998754
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=148.52 Aligned_cols=217 Identities=15% Similarity=0.145 Sum_probs=153.3
Q ss_pred CceeEEEeecCCeEEEE-EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChH
Q 024228 20 GMTQRTIEIEPGTILNI-WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~-~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
.++-..+.++.|..+.. +...+....+++++.||...+.. ....+...|+.. ++++++|++|+|.|.+.+......
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y 112 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLY 112 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCcccccch
Confidence 45566677776666533 33333234699999999977766 555566667764 999999999999999877665544
Q ss_pred HHHHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccccc
Q 024228 97 FQAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (270)
Q Consensus 97 ~~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (270)
+.++.+.++++.-. .++++|+|+|+|+..++.+|.+.| +.++|+.+|.................+..+
T Consensus 113 ~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~~~~d~f-------- 182 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTTYCFDAF-------- 182 (258)
T ss_pred hhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceEEeeccc--------
Confidence 44444444444433 578999999999999999999998 999999998765332221110000000000
Q ss_pred HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHH
Q 024228 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 254 (270)
........+.+|+|++||++|+++|.....++++..+...+-.++.|+||.... ...++.+.
T Consensus 183 -----------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~-~~~~yi~~ 244 (258)
T KOG1552|consen 183 -----------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIE-LYPEYIEH 244 (258)
T ss_pred -----------------cccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccc-cCHHHHHH
Confidence 001223444599999999999999999999999999856688999999999854 44457799
Q ss_pred HHHHHHhhhhh
Q 024228 255 LKTILASLVHA 265 (270)
Q Consensus 255 i~~fl~~~~~~ 265 (270)
+.+|+......
T Consensus 245 l~~f~~~~~~~ 255 (258)
T KOG1552|consen 245 LRRFISSVLPS 255 (258)
T ss_pred HHHHHHHhccc
Confidence 99999876654
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=157.18 Aligned_cols=183 Identities=25% Similarity=0.313 Sum_probs=126.0
Q ss_pred ceEEeecCCCCCCCCC----CCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 73 YEVYVPDFLFFGSSVT----DRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|+|+++|+||+|.|++ ....++.+++++++..+++.++.++++++||||||.+++.+|+++|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 6899999999999994 235588999999999999999999999999999999999999999999999999998620
Q ss_pred ----CCchhhhH-hhhhccc---------------hhhh---hhcc----cccHHHHH--HHHH--------h-----hh
Q 024228 149 ----LTESVSNA-ALERIGY---------------ESWV---DFLL----PKTADALK--VQFD--------I-----AC 186 (270)
Q Consensus 149 ----~~~~~~~~-~~~~~~~---------------~~~~---~~~~----~~~~~~~~--~~~~--------~-----~~ 186 (270)
........ ....... .... .... ........ .... . ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALG 160 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccccc
Confidence 00000000 0000000 0000 0000 00000000 0000 0 00
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHH
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 256 (270)
....+.....+..+.+|+++++|++|.++|++....+.+.++ +.++++++++||..++++++++.+.|.
T Consensus 161 ~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 161 YFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000111122333445999999999999999999999998888 899999999999999999999988775
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.2e-22 Score=156.14 Aligned_cols=236 Identities=16% Similarity=0.190 Sum_probs=147.3
Q ss_pred ceeEEEeec-CCeEEEEEecCC-CCCCceEEEeCCCCCcccccH-----HHHHHHhhcc-ceEEeecCCCCCCCCCCCCC
Q 024228 21 MTQRTIEIE-PGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~ 92 (270)
.+...+..+ ++..+..+.+.. ...+++||++||+..+.. .+ +.+++.|.+. |+|+++|++|+|.+.. .
T Consensus 36 ~~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~-~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~ 111 (350)
T TIGR01836 36 VTPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPY-MLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---Y 111 (350)
T ss_pred CCCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccce-eccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---c
Confidence 344444433 556666554432 234567999999865544 43 5788999887 9999999999998753 2
Q ss_pred CChHHHHH-HHHH----HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh--hhHhhhh-----
Q 024228 93 RTASFQAE-CMAK----GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV--SNAALER----- 160 (270)
Q Consensus 93 ~~~~~~~~-~~~~----~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~--~~~~~~~----- 160 (270)
.+.++++. ++.+ +++..+.++++++||||||.+++.+++.+|++|+++|+++++....... .......
T Consensus 112 ~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 112 LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 35555543 2433 4445577899999999999999999999999999999999877543211 0000000
Q ss_pred ----cc-c-----hhhhhhccc---------------ccHHH---------------------HHHHHHhhhhcCCCC--
Q 024228 161 ----IG-Y-----ESWVDFLLP---------------KTADA---------------------LKVQFDIACYKLPTL-- 192 (270)
Q Consensus 161 ----~~-~-----~~~~~~~~~---------------~~~~~---------------------~~~~~~~~~~~~~~~-- 192 (270)
.+ . ......+.+ ..... +.+++..........
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g 271 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLING 271 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCC
Confidence 00 0 000000000 00000 011111000000000
Q ss_pred ------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEEEecCCCcceeecc---hHhHHHHHHHHHHh
Q 024228 193 ------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLER---PFVYNRQLKTILAS 261 (270)
Q Consensus 193 ------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 261 (270)
....+.++.+|+++++|++|.++|++.++.+.+.++. +.++++++ +||...+.. ++++.+.|.+||.+
T Consensus 272 ~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 272 EVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred eeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 0112445569999999999999999999999998862 46777777 689987754 47899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=144.88 Aligned_cols=123 Identities=19% Similarity=0.272 Sum_probs=96.9
Q ss_pred eEEEeecCCe-EEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCC-CCChHH
Q 024228 23 QRTIEIEPGT-ILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRP-DRTASF 97 (270)
Q Consensus 23 ~~~i~~~~g~-~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~-~~~~~~ 97 (270)
...+.+.++. .+..|...+ .+.+|.++++||++.+.- .|..++..|... .+|+++|+||||++.-... +.+.+.
T Consensus 50 kedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT 128 (343)
T KOG2564|consen 50 KEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLET 128 (343)
T ss_pred ccccccCCCcceEEEEEecCCCCCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHH
Confidence 3344453222 455444443 567899999999999999 999999998887 8889999999999986654 489999
Q ss_pred HHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 98 ~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
+++|+.++++.+ ...+++|+||||||.+|...|... |. +.++++++-.-
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVE 182 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVE 182 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEec
Confidence 999999999987 245799999999999998877653 55 88999887543
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-22 Score=137.63 Aligned_cols=142 Identities=25% Similarity=0.279 Sum_probs=111.7
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH-H-HhCCCceEEEEEchhH
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL-R-KLGVEKCTLVGVSYGG 123 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l-~-~~~~~~~~l~G~S~Gg 123 (270)
+||++||++++.. .|..+++.|++. |.|+.+|+|++|.+... ...+++.+.+ . ..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGA-------DAVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHS-------HHHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchh-------HHHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 5899999999988 899999999998 99999999999987321 1222222222 1 2366899999999999
Q ss_pred HHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK 203 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 203 (270)
.+++.++.+. .+++++|++++... ...+.....|
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~---------------------------------------------~~~~~~~~~p 106 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD---------------------------------------------SEDLAKIRIP 106 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG---------------------------------------------CHHHTTTTSE
T ss_pred HHHHHHhhhc-cceeEEEEecCccc---------------------------------------------hhhhhccCCc
Confidence 9999999998 67999999998210 0011122269
Q ss_pred eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcc
Q 024228 204 IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHL 242 (270)
Q Consensus 204 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 242 (270)
+++++|++|..++.+..+.+.+.++.+.+++++++++|+
T Consensus 107 v~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 107 VLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 999999999999999999999999867999999999995
|
... |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=158.72 Aligned_cols=237 Identities=16% Similarity=0.164 Sum_probs=154.0
Q ss_pred cccCCceeEEEeecCCeEEEEEecCCCCC-----CceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCC
Q 024228 16 LKLVGMTQRTIEIEPGTILNIWVPKKTTK-----KHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVT 88 (270)
Q Consensus 16 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~-----~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~ 88 (270)
.+....+...+...||.+++.|...+... -|+||++||++.... ..|....+.|+.. |.|+.+|+||.+.-..
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 34455677777887999998776554321 289999999986555 2455667778877 9999999998644211
Q ss_pred --------CCCCCChHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh
Q 024228 89 --------DRPDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 89 --------~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
.......+++.+.+. ++... +.+++++.|+|+||++++.++...| ++++.+...+............
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~ 517 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST 517 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc
Confidence 112244555554454 44443 3458999999999999999999988 6888877766544221111100
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
....................+. ...+-....++.+|+|+|||++|..||.+.+.++.+.+. ..++++
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~----------~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~ 587 (620)
T COG1506 518 EGLRFDPEENGGGPPEDREKYE----------DRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELV 587 (620)
T ss_pred hhhcCCHHHhCCCcccChHHHH----------hcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEE
Confidence 0000000000000000001111 112333455566999999999999999999999988876 357999
Q ss_pred EecCCCcceee-cchHhHHHHHHHHHHhhhh
Q 024228 235 SIEKAGHLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 235 ~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
++|+.+|.+.. ++...+.+.+.+|++++..
T Consensus 588 ~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 588 VFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred EeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999977 5566688888888887654
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-20 Score=150.06 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=131.0
Q ss_pred CCceEEEeCCCCCcccccHH-----HHHHHhhcc-ceEEeecCCCCCCCCCCC--CCCChHHHHHHHHHHHHHhCCCceE
Q 024228 44 KKHAVVLLHPFGFDGILTWQ-----FQVLALAKT-YEVYVPDFLFFGSSVTDR--PDRTASFQAECMAKGLRKLGVEKCT 115 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~-----~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (270)
.+++||++||+..... .|+ .+++.|.++ |+|+++|++|+|.+.... .++..+.+.+++..+++.++.++++
T Consensus 187 ~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVN 265 (532)
T ss_pred CCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeE
Confidence 5789999999987776 664 688999877 999999999999886432 2233344556677777777889999
Q ss_pred EEEEchhHHHHH----HHHhhC-ccccccEEEecccCCCCchhhh-------------Hhhhhccc------hhhhhhcc
Q 024228 116 LVGVSYGGMVGF----KMAEMY-PDLVESMVVTCSVMGLTESVSN-------------AALERIGY------ESWVDFLL 171 (270)
Q Consensus 116 l~G~S~Gg~~a~----~~a~~~-p~~v~~~i~~~~~~~~~~~~~~-------------~~~~~~~~------~~~~~~~~ 171 (270)
++|||+||.++. .+++.. +++|++++++++..++...... ......+. ......+.
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 245555 7789999999988765432110 00000000 00000000
Q ss_pred c---------------ccH----------------HH-HHHHHHhhhhcCC--------CChhhhhhhhheeeeEEEcCC
Q 024228 172 P---------------KTA----------------DA-LKVQFDIACYKLP--------TLPAFVYKHILEKIHLLWGEN 211 (270)
Q Consensus 172 ~---------------~~~----------------~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~P~l~i~g~~ 211 (270)
+ ... .. ..+++........ ......+.++.+|++++.|++
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~ 425 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATRE 425 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCC
Confidence 0 000 00 0000000000000 001122333339999999999
Q ss_pred CccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 212 DKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
|.++|++.+..+.+.++ +.+..+++++||..++++|
T Consensus 426 D~IvP~~sa~~l~~~i~-~~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 426 DHIAPWQSAYRGAALLG-GPKTFVLGESGHIAGVVNP 461 (532)
T ss_pred CCcCCHHHHHHHHHHCC-CCEEEEECCCCCchHhhCC
Confidence 99999999999999887 7888899999999988765
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.3e-20 Score=139.20 Aligned_cols=225 Identities=26% Similarity=0.289 Sum_probs=144.9
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
+..+.|...+.. .|+++++||++++.. .|......+... |+++.+|+||||.|. .. .......++++..+++
T Consensus 9 ~~~~~~~~~~~~--~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~ 83 (282)
T COG0596 9 GVRLAYREAGGG--GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLD 83 (282)
T ss_pred CeEEEEeecCCC--CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHH
Confidence 445555555442 569999999999988 887743333332 899999999999997 22 3345555899999999
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC-----------CchhhhHh---hhhc---cchhh----
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL-----------TESVSNAA---LERI---GYESW---- 166 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~-----------~~~~~~~~---~~~~---~~~~~---- 166 (270)
.++..+++++|||+||.+++.++.++|+++++++++++.... ........ .... .....
T Consensus 84 ~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (282)
T COG0596 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAAL 163 (282)
T ss_pred HhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcc
Confidence 999888999999999999999999999999999999976430 00000000 0000 00000
Q ss_pred --hhhcc-----------c-ccHHHHHHHHHhhh---hc----CCC--ChhhhhhhhheeeeEEEcCCCccCCHHHHHHH
Q 024228 167 --VDFLL-----------P-KTADALKVQFDIAC---YK----LPT--LPAFVYKHILEKIHLLWGENDKIFDMQVARNL 223 (270)
Q Consensus 167 --~~~~~-----------~-~~~~~~~~~~~~~~---~~----~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 223 (270)
..... . .............. .. ... ..........+|+++++|++|.+.|......+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~ 243 (282)
T COG0596 164 GLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRL 243 (282)
T ss_pred cccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHH
Confidence 00000 0 00000000000000 00 000 01122333349999999999977776666666
Q ss_pred HHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 224 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+..+...++.+++++||..+.++|+.+.+.+.+|++
T Consensus 244 ~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 244 AAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 6666523899999999999999999999888888543
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-20 Score=131.14 Aligned_cols=213 Identities=15% Similarity=0.121 Sum_probs=148.5
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH-HhCCCceEEEEEch
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR-KLGVEKCTLVGVSY 121 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~l~G~S~ 121 (270)
..+..++++|=.|+++. .|+.+...|...+.++++++||+|..-..+...+++.+++.+...+. .....++.++||||
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 34678999999899988 99999999988899999999999998777777899999999998888 45557899999999
Q ss_pred hHHHHHHHHhhCcc---ccccEEEecccCCCCchh-------hhHhhhhcc-chhhh-hhcc-cccHHHHHHHHH-----
Q 024228 122 GGMVGFKMAEMYPD---LVESMVVTCSVMGLTESV-------SNAALERIG-YESWV-DFLL-PKTADALKVQFD----- 183 (270)
Q Consensus 122 Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~~~~~-------~~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~----- 183 (270)
||++|..+|.+... .+.++.+.+...+..... .......+. ..... ..+. ++....+...+.
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~ 163 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRA 163 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHH
Confidence 99999999987522 256666665544311100 000110000 00000 0000 011111111111
Q ss_pred hhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 184 IACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
...|+... -..+.||+.++.|++|..+..+....|.+...+..++++++| ||+...++.+++.+.|.+.+...
T Consensus 164 ~e~Y~~~~-----~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 164 LESYRYPP-----PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred hcccccCC-----CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhhh
Confidence 11111111 123339999999999999999999999999887899999996 99999999999999999988643
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-20 Score=136.43 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=114.4
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCC-----------CCCCC---hHHHHHHHHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD-----------RPDRT---ASFQAECMAKGLR 107 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~-----------~~~~~---~~~~~~~~~~~l~ 107 (270)
+..++||++||++++.. .|..+++.|.+. +.+..++++|...+... ..... .....+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 45789999999999999 999999999876 44555555554322110 00011 1122222333333
Q ss_pred ----HhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHH
Q 024228 108 ----KLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQ 181 (270)
Q Consensus 108 ----~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (270)
..+ .++++++|||+||.+++.++.++|+.+.+++.+++..... +..
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~---------------------~~~------- 144 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL---------------------PET------- 144 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc---------------------ccc-------
Confidence 233 3579999999999999999999998778777765432100 000
Q ss_pred HHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 182 FDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
....+|++++||++|+++|.+.++.+.+.+. .++++++++++||.+..+..+.+.+.+.++
T Consensus 145 ----------------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~ 208 (232)
T PRK11460 145 ----------------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYT 208 (232)
T ss_pred ----------------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 0012799999999999999999988888775 256888999999998654444444445444
Q ss_pred H
Q 024228 259 L 259 (270)
Q Consensus 259 l 259 (270)
|
T Consensus 209 l 209 (232)
T PRK11460 209 V 209 (232)
T ss_pred c
Confidence 4
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=133.71 Aligned_cols=243 Identities=20% Similarity=0.181 Sum_probs=147.5
Q ss_pred ceeEEEeecCCeEE-EEEec-CCCCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChH
Q 024228 21 MTQRTIEIEPGTIL-NIWVP-KKTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 21 ~~~~~i~~~~g~~l-~~~~~-~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
...+.+.++||..+ ..|.. .....+|.||++||+.|+.. .+-+.+++.+.++ |.+++++.|||+.+....+...-.
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~ 128 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS 128 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecc
Confidence 35567788877655 34444 33355689999999988877 3445667888888 999999999999987655443333
Q ss_pred HHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccCCCCc-------hhhhHhhhhccc
Q 024228 97 FQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGLTE-------SVSNAALERIGY 163 (270)
Q Consensus 97 ~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~~~~~-------~~~~~~~~~~~~ 163 (270)
.+.+|+..+++.+ ...++..+|.|+||.+...+..+..+ .+.+.+.++.+.+... .......+....
T Consensus 129 G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~ 208 (345)
T COG0429 129 GETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLL 208 (345)
T ss_pred cchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHH
Confidence 4446666666655 45689999999999655555555432 3566666655443210 000011110000
Q ss_pred hhh-------hhhc---cccc-HHHHHHHHHhhhhc-----------------CCCChhhhhhhhheeeeEEEcCCCccC
Q 024228 164 ESW-------VDFL---LPKT-ADALKVQFDIACYK-----------------LPTLPAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 164 ~~~-------~~~~---~~~~-~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
... ...+ .+.. ...++.......+. +.......+.++.+|+|+|++.+|+++
T Consensus 209 ~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~ 288 (345)
T COG0429 209 RNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFM 288 (345)
T ss_pred HHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCC
Confidence 000 0000 1111 11111111111110 011122334455599999999999999
Q ss_pred CHHHHHHHHHHhcCCceEEEecCCCcceeec----chH-hHHHHHHHHHHhhh
Q 024228 216 DMQVARNLKEQVGQNATMESIEKAGHLVNLE----RPF-VYNRQLKTILASLV 263 (270)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~~ 263 (270)
+++.........++++.+..-+.+||..++. ++. ...+.+.+||+...
T Consensus 289 ~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 289 PPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 9987777766455589999999999999886 343 56678888987654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=135.70 Aligned_cols=192 Identities=16% Similarity=0.231 Sum_probs=122.3
Q ss_pred cHHHHHHHhhcc-ceEEeecCCCCCCCCCCC----CCCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHH
Q 024228 61 TWQFQVLALAKT-YEVYVPDFLFFGSSVTDR----PDRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKM 129 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~----~~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~ 129 (270)
.|......|++. |.|+.+|+||.+...... ....-....+|+.+.++.+ +.+++.++|+|+||++++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 344567788777 999999999987432111 1112233466666666655 34689999999999999999
Q ss_pred HhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccc-ccHHHHHHHHHhhhhcCCCChhhhhhh--hheeeeE
Q 024228 130 AEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP-KTADALKVQFDIACYKLPTLPAFVYKH--ILEKIHL 206 (270)
Q Consensus 130 a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~l~ 206 (270)
+.++|+++++++..++............. ...........+ .....+........ ..+ ..+|+|+
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~----------~~~~~~~~P~li 149 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDPWDNPEFYRELSPISP----------ADNVQIKPPVLI 149 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSSTTTSHHHHHHHHHGGG----------GGGCGGGSEEEE
T ss_pred hcccceeeeeeeccceecchhcccccccc--cccccccccCccchhhhhhhhhccccc----------cccccCCCCEEE
Confidence 99999999999999988765433222100 000001111111 11222222221111 222 4499999
Q ss_pred EEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cchHhHHHHHHHHHHhhhh
Q 024228 207 LWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 207 i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
++|++|..||++.+..+.+.+. .+.+++++|++||.+.. +......+.+.+||++...
T Consensus 150 ~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 150 IHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp EEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred EccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 9999999999999999988876 35899999999996654 4556788999999987654
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-19 Score=129.83 Aligned_cols=235 Identities=16% Similarity=0.168 Sum_probs=142.7
Q ss_pred eEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHH-----HHHhhccceEEeecCCCCCCCCCCCC----C
Q 024228 23 QRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQ-----VLALAKTYEVYVPDFLFFGSSVTDRP----D 92 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~~~v~~~d~~g~G~s~~~~~----~ 92 (270)
++.++++-| .+++...|.. .++|++|-.|..|.+....|..+ ++.+.+++.++-+|.||+.......+ .
T Consensus 1 eh~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 356777544 7777777764 36899999999999888447766 46677889999999999976543332 3
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc-------cchh
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-------GYES 165 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~-------~~~~ 165 (270)
.+.+++++++..++++++.+.++-+|...||++..++|..+|++|.++|++++......+......+.. +...
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTS 159 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccccc
Confidence 789999999999999999999999999999999999999999999999999998765543322111111 1100
Q ss_pred h-hhhc---------c---c-------------ccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH
Q 024228 166 W-VDFL---------L---P-------------KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV 219 (270)
Q Consensus 166 ~-~~~~---------~---~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 219 (270)
. ...+ . . .....+..++.....+... ........||+|++.|+..+.+ +.
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL--~~~~~~~~c~vLlvvG~~Sp~~--~~ 235 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDL--SIERPSLGCPVLLVVGDNSPHV--DD 235 (283)
T ss_dssp -HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-------SECTTCCS-EEEEEETTSTTH--HH
T ss_pred chHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccc--hhhcCCCCCCeEEEEecCCcch--hh
Confidence 0 0000 0 0 0011111111111111110 0111222299999999999875 46
Q ss_pred HHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 220 ARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 220 ~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+..+.+++. ...++..++++|-.+..|+|+.+++.+.=||+..
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 667777775 5678999999999999999999999999999864
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.4e-20 Score=137.37 Aligned_cols=125 Identities=20% Similarity=0.206 Sum_probs=96.3
Q ss_pred EEeecCCeEEEEEe-cCCCCCCceEEEeCCCCCccc---ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 25 TIEIEPGTILNIWV-PKKTTKKHAVVLLHPFGFDGI---LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 25 ~i~~~~g~~l~~~~-~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
+++.+.|....++. +....++++||++||++.... ..|..+++.|++. |.|+++|+||||.|.......+.+.+.
T Consensus 4 ~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~ 83 (266)
T TIGR03101 4 FLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWK 83 (266)
T ss_pred EecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHH
Confidence 45555566554433 333234678999999986432 2566778889877 999999999999998665556777888
Q ss_pred HHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 100 ECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 100 ~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
+|+..+++. .+.++++++||||||.+++.+|.++|++++++|+++|....
T Consensus 84 ~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 84 EDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 887775544 45679999999999999999999999999999999987653
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-19 Score=158.53 Aligned_cols=230 Identities=18% Similarity=0.229 Sum_probs=147.1
Q ss_pred CCeEEEEEecCC-----CCCCceEEEeCCCCCcccccHHHH-----HHHhhcc-ceEEeecCCCCCCCCCCCC--CCChH
Q 024228 30 PGTILNIWVPKK-----TTKKHAVVLLHPFGFDGILTWQFQ-----VLALAKT-YEVYVPDFLFFGSSVTDRP--DRTAS 96 (270)
Q Consensus 30 ~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~~~~ 96 (270)
+-.++..|.+.. ...+++||++||++.+.. .|+.. ++.|.+. |+|+++|+ |.++.+.. ..++.
T Consensus 47 ~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~ 122 (994)
T PRK07868 47 PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLA 122 (994)
T ss_pred CcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHH
Confidence 445665554432 235689999999999998 99864 7888777 99999995 55554332 24666
Q ss_pred HHHHHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCch----hhhH------------
Q 024228 97 FQAECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTES----VSNA------------ 156 (270)
Q Consensus 97 ~~~~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~----~~~~------------ 156 (270)
+++..+.+.++. +..++++++||||||.+++.+++.+ +++|+++++++++.++... ....
T Consensus 123 ~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 202 (994)
T PRK07868 123 DHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADH 202 (994)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhh
Confidence 666566555554 3446899999999999999998755 5589999998877543211 0000
Q ss_pred hhhhccchh------------------h---hhhcc-cccH------HH--------------HHHHHHhhhhcCCC---
Q 024228 157 ALERIGYES------------------W---VDFLL-PKTA------DA--------------LKVQFDIACYKLPT--- 191 (270)
Q Consensus 157 ~~~~~~~~~------------------~---~~~~~-~~~~------~~--------------~~~~~~~~~~~~~~--- 191 (270)
......... . ...+. +... .. ..++..........
T Consensus 203 ~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g 282 (994)
T PRK07868 203 VFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTG 282 (994)
T ss_pred hhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCc
Confidence 000000000 0 00000 0000 00 01111111000000
Q ss_pred ---C--hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceE-EEecCCCcceee---cchHhHHHHHHHHHHhh
Q 024228 192 ---L--PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATM-ESIEKAGHLVNL---ERPFVYNRQLKTILASL 262 (270)
Q Consensus 192 ---~--~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 262 (270)
. ....+.++.+|+|+|+|++|.++|++.++.+.+.++ +.++ .+++++||+.++ ..+++++..|.+||++.
T Consensus 283 ~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 283 GFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred eEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 0 001355666999999999999999999999999987 7887 677899999987 45788999999999987
Q ss_pred hh
Q 024228 263 VH 264 (270)
Q Consensus 263 ~~ 264 (270)
..
T Consensus 362 ~~ 363 (994)
T PRK07868 362 EG 363 (994)
T ss_pred cc
Confidence 54
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-19 Score=134.78 Aligned_cols=197 Identities=14% Similarity=0.156 Sum_probs=120.3
Q ss_pred CCeEEE--EEecCC--CCCCceEEEeCCCCCcccccHHHH--HHHhhc-c-ceEEeecC--CCCCCCCCCC---------
Q 024228 30 PGTILN--IWVPKK--TTKKHAVVLLHPFGFDGILTWQFQ--VLALAK-T-YEVYVPDF--LFFGSSVTDR--------- 90 (270)
Q Consensus 30 ~g~~l~--~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~--~~~l~~-~-~~v~~~d~--~g~G~s~~~~--------- 90 (270)
.+..+. ++.+.. ..+.|+|+++||++++.. .|... ...+++ . +.|+++|. +|+|.+....
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~ 101 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAG 101 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcc
Confidence 345544 444432 235789999999999888 77532 344543 4 99999998 5555332100
Q ss_pred -----------CCCC-hHHHHHHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh
Q 024228 91 -----------PDRT-ASFQAECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN 155 (270)
Q Consensus 91 -----------~~~~-~~~~~~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~ 155 (270)
..+. .....+++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++..........
T Consensus 102 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~ 181 (275)
T TIGR02821 102 FYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWG 181 (275)
T ss_pred ccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcch
Confidence 0112 23346777777776 35578999999999999999999999999999999887653211000
Q ss_pred HhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhh--hhheeeeEEEcCCCccCCH-HHHHHHHHHhc---C
Q 024228 156 AALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYK--HILEKIHLLWGENDKIFDM-QVARNLKEQVG---Q 229 (270)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~---~ 229 (270)
.......+ ......... ..+..... ....|+++.+|++|+.++. .....+.+.+. .
T Consensus 182 -------~~~~~~~l-~~~~~~~~~----------~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~ 243 (275)
T TIGR02821 182 -------QKAFSAYL-GADEAAWRS----------YDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ 243 (275)
T ss_pred -------HHHHHHHh-cccccchhh----------cchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC
Confidence 00000000 000000000 00111111 1237899999999999997 44555555443 3
Q ss_pred CceEEEecCCCcceee
Q 024228 230 NATMESIEKAGHLVNL 245 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~ 245 (270)
.+++.+++|++|.+..
T Consensus 244 ~v~~~~~~g~~H~f~~ 259 (275)
T TIGR02821 244 ALTLRRQAGYDHSYYF 259 (275)
T ss_pred CeEEEEeCCCCccchh
Confidence 5789999999998853
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-20 Score=126.15 Aligned_cols=210 Identities=17% Similarity=0.154 Sum_probs=139.0
Q ss_pred CCCceEEEeCCCCCcccc-cHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-c--eEEE
Q 024228 43 TKKHAVVLLHPFGFDGIL-TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE-K--CTLV 117 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~~l~ 117 (270)
++...+|++||+-++... ....++..|.+. +.++.+|++|.|+|............++|+..+++++... + -+++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 346789999999998773 334567888888 9999999999999997765555556679999999998533 3 3578
Q ss_pred EEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH-------hhhhccchhhhh----hcccccHHHHHHHHHhhh
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-------ALERIGYESWVD----FLLPKTADALKVQFDIAC 186 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 186 (270)
|||-||.+++.+|.++++ +..+|-+++-.........+ +....++..... ....-....+...+.-..
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~ 189 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDI 189 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchh
Confidence 999999999999999987 88877777655443222111 111111111100 000001111111111111
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
. +...--+..||+|-+||..|.+||.+.+.++++.++ +.++.++||+.|.....+ .+.......|.+
T Consensus 190 h-----~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-nH~L~iIEgADHnyt~~q-~~l~~lgl~f~k 256 (269)
T KOG4667|consen 190 H-----EACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-NHKLEIIEGADHNYTGHQ-SQLVSLGLEFIK 256 (269)
T ss_pred h-----hhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-CCceEEecCCCcCccchh-hhHhhhcceeEE
Confidence 0 111111222999999999999999999999999998 899999999999986543 334444445443
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-18 Score=123.61 Aligned_cols=102 Identities=17% Similarity=0.126 Sum_probs=91.2
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHhCCC-ceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKLGVE-KCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~l~G~S~ 121 (270)
..+||-+||.+|+.. .|..+.+.|.+. .+++.+++||+|.++..... ++-.+...-+.++++.++++ +++++|||.
T Consensus 35 ~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSr 113 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSR 113 (297)
T ss_pred ceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEecc
Confidence 348999999999999 999999999998 99999999999999976643 78888889999999999875 688899999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCC
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
||-.|+.+|..+| ..++++++|+...
T Consensus 114 Gcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 114 GCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred chHHHHHHHhcCc--cceEEEecCCccc
Confidence 9999999999996 6799999988653
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.8e-19 Score=134.70 Aligned_cols=186 Identities=14% Similarity=0.131 Sum_probs=120.3
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK- 108 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~- 108 (270)
+..+.++.+....+.|+||++||++.+.. .|..+++.|+++ |.|+++|++|++.+.......+.....+.+.+.++.
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhh
Confidence 45566666665566799999999999988 999999999988 999999999865332111001112222222222222
Q ss_pred ------hCCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHH
Q 024228 109 ------LGVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (270)
Q Consensus 109 ------~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
.+.++++++|||+||.+++.+|..+++ +++++|+++|......... . .+..
T Consensus 117 l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~--~-------------~p~i--- 178 (313)
T PLN00021 117 LPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ--T-------------PPPV--- 178 (313)
T ss_pred cccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC--C-------------CCcc---
Confidence 234689999999999999999998874 5889999988654321000 0 0000
Q ss_pred HHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCc-----c----CCHH-HHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 178 LKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDK-----I----FDMQ-VARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~----~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
+ .+.. ...++.+|+|++.+..|. . .|.. ...++++..+..+...+++++||+.+++.
T Consensus 179 ----l---~~~~------~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~ 245 (313)
T PLN00021 179 ----L---TYAP------HSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDD 245 (313)
T ss_pred ----c---ccCc------ccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecC
Confidence 0 0000 001123899999998763 2 2233 33667777766788999999999998754
Q ss_pred h
Q 024228 248 P 248 (270)
Q Consensus 248 ~ 248 (270)
.
T Consensus 246 ~ 246 (313)
T PLN00021 246 D 246 (313)
T ss_pred C
Confidence 3
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-18 Score=130.13 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=115.4
Q ss_pred eEEEEEecCC--CCCCceEEEeCCCCCcccccHHH---HHHHhhcc-ceEEeecCCCCCCC-----CC-----C------
Q 024228 32 TILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQF---QVLALAKT-YEVYVPDFLFFGSS-----VT-----D------ 89 (270)
Q Consensus 32 ~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~G~s-----~~-----~------ 89 (270)
..+.++.|.. ..+.|+|+++||++++.. .|.. +...+... +.|+.+|..++|.. .. .
T Consensus 32 ~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~ 110 (283)
T PLN02442 32 MTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLN 110 (283)
T ss_pred eEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeec
Confidence 3344455542 235689999999998877 6644 33555655 99999998776621 10 0
Q ss_pred --CC----CCChHHHHHHHH----HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh
Q 024228 90 --RP----DRTASFQAECMA----KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 90 --~~----~~~~~~~~~~~~----~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
.. ....+...+++. ...+.++.++++++||||||..|+.++.++|+++++++.+++...........
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~--- 187 (283)
T PLN02442 111 ATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQ--- 187 (283)
T ss_pred cccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhh---
Confidence 00 001122333333 33344577889999999999999999999999999999998876532110000
Q ss_pred hccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHh---cCCceEEE
Q 024228 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQV---GQNATMES 235 (270)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~---~~~~~~~~ 235 (270)
......+ ........+. . ...+........+|+++++|++|.+++.. ..+.+.+.+ ..++++++
T Consensus 188 ----~~~~~~~-g~~~~~~~~~------d-~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~ 255 (283)
T PLN02442 188 ----KAFTNYL-GSDKADWEEY------D-ATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRL 255 (283)
T ss_pred ----HHHHHHc-CCChhhHHHc------C-hhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEE
Confidence 0000001 1110000000 0 00011111223489999999999998853 244444433 24688999
Q ss_pred ecCCCccee
Q 024228 236 IEKAGHLVN 244 (270)
Q Consensus 236 ~~~~gH~~~ 244 (270)
+++.+|...
T Consensus 256 ~pg~~H~~~ 264 (283)
T PLN02442 256 QPGYDHSYF 264 (283)
T ss_pred eCCCCccHH
Confidence 999999865
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=134.01 Aligned_cols=231 Identities=13% Similarity=0.072 Sum_probs=130.5
Q ss_pred ceeEEEeecCCeEEEE--EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 21 MTQRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
+++..|+.. |..|.. ..+....+.|+||++.|+.+...+.|..+.+.|..+ +.++++|.||.|.|.......+.+.
T Consensus 165 i~~v~iP~e-g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~ 243 (411)
T PF06500_consen 165 IEEVEIPFE-GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSR 243 (411)
T ss_dssp EEEEEEEET-TCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCH
T ss_pred cEEEEEeeC-CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHH
Confidence 566667775 566643 344443455778888888777763455555677766 9999999999999875544444455
Q ss_pred HHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhhhc-
Q 024228 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVDFL- 170 (270)
Q Consensus 98 ~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~- 170 (270)
+...+.+.+... +..+|.++|.|+||++|.++|...++|++++|..+++...--... ...... ........+
T Consensus 244 l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~-~~~~~~P~my~d~LA~rlG 322 (411)
T PF06500_consen 244 LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP-EWQQRVPDMYLDVLASRLG 322 (411)
T ss_dssp HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H-HHHTTS-HHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH-HHHhcCCHHHHHHHHHHhC
Confidence 666666666654 345899999999999999999988889999999998754321110 111111 011111111
Q ss_pred -ccccHHHHHHHHHhhhhcCCCChhhhh--hhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC-cceeec
Q 024228 171 -LPKTADALKVQFDIACYKLPTLPAFVY--KHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG-HLVNLE 246 (270)
Q Consensus 171 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~ 246 (270)
.......+...+.... .....++ ++..+|+|.+.+++|+++|.+..+-++..-. +.+...++... |..
T Consensus 323 ~~~~~~~~l~~el~~~S----Lk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~-~gk~~~~~~~~~~~g--- 394 (411)
T PF06500_consen 323 MAAVSDESLRGELNKFS----LKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESST-DGKALRIPSKPLHMG--- 394 (411)
T ss_dssp -SCE-HHHHHHHGGGGS----TTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT-T-EEEEE-SSSHHHH---
T ss_pred CccCCHHHHHHHHHhcC----cchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCC-CCceeecCCCccccc---
Confidence 0111222222221111 1122223 4445899999999999999999888887765 67788887543 332
Q ss_pred chHhHHHHHHHHHHhh
Q 024228 247 RPFVYNRQLKTILASL 262 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~~ 262 (270)
-+.-...+.+||++.
T Consensus 395 -y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 395 -YPQALDEIYKWLEDK 409 (411)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHh
Confidence 234567788888764
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-17 Score=128.15 Aligned_cols=243 Identities=15% Similarity=0.103 Sum_probs=145.2
Q ss_pred CceeEEEeecCCeEEEEEec--CCC------CCCceEEEeCCCCCcccccH-HHHHHHhhcc-ceEEeecCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNIWVP--KKT------TKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~--~~~------~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~ 89 (270)
..++..++++||..+.+-.. ... ...|+||++||+.+++.+.| +.++..+.+. |++++++.||+|.+.-.
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~Lt 171 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLT 171 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccC
Confidence 45788899999988876322 221 35699999999988777344 4455555555 99999999999999876
Q ss_pred CCCCChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCC--Cchhh----hH
Q 024228 90 RPDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGL--TESVS----NA 156 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~--~~~~~----~~ 156 (270)
.+......+.+|+.++++++ ...++..+|.||||.+.+.|..+..+ .+.++++.+|+-.. ..... ..
T Consensus 172 Tpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~ 251 (409)
T KOG1838|consen 172 TPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRR 251 (409)
T ss_pred CCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchH
Confidence 65544444567777777665 44589999999999999999987643 24455555554321 11100 00
Q ss_pred hhhhccchhhh------------------hhcccccHHHHHHHHHhhhhc--------CCCChhhhhhhhheeeeEEEcC
Q 024228 157 ALERIGYESWV------------------DFLLPKTADALKVQFDIACYK--------LPTLPAFVYKHILEKIHLLWGE 210 (270)
Q Consensus 157 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~P~l~i~g~ 210 (270)
........... ......+...+.+.+....+. ....+...+.++.+|+|+|++.
T Consensus 252 ~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~ 331 (409)
T KOG1838|consen 252 FYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAA 331 (409)
T ss_pred HHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecC
Confidence 00000000000 000111112222222111111 1112223344555999999999
Q ss_pred CCccCCHHHH-HHHHHHhcCCceEEEecCCCcceeecc----hHhHHHH-HHHHHHhhh
Q 024228 211 NDKIFDMQVA-RNLKEQVGQNATMESIEKAGHLVNLER----PFVYNRQ-LKTILASLV 263 (270)
Q Consensus 211 ~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~-i~~fl~~~~ 263 (270)
+|+++|++.. .......+ ++-+++-..+||..++|. +....+. +.+|+....
T Consensus 332 DDPv~p~~~ip~~~~~~np-~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 332 DDPVVPEEAIPIDDIKSNP-NVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred CCCCCCcccCCHHHHhcCC-cEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 9999997533 22233333 777777788899999876 2333344 777877654
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-17 Score=118.52 Aligned_cols=239 Identities=15% Similarity=0.155 Sum_probs=164.6
Q ss_pred ceeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHH-----HHHhhccceEEeecCCCCCCCCCCC----
Q 024228 21 MTQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQ-----VLALAKTYEVYVPDFLFFGSSVTDR---- 90 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~~~v~~~d~~g~G~s~~~~---- 90 (270)
.+++.|.+.- ..+++...|.. +++|++|-.|..+.+....|+.+ +..+.+++-++-+|.||+-......
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y 100 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGY 100 (326)
T ss_pred ceeeeecccc-ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCC
Confidence 6788888864 45666666653 36889999999999988447665 3556667999999999996554322
Q ss_pred CCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc-------cc
Q 024228 91 PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-------GY 163 (270)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~-------~~ 163 (270)
...+.++++++|..++++++.+.++-+|...|+++..++|..+|++|.++|++++.+....+......... +.
T Consensus 101 ~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gm 180 (326)
T KOG2931|consen 101 PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGM 180 (326)
T ss_pred CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhch
Confidence 23789999999999999999999999999999999999999999999999999988765544322211111 11
Q ss_pred hhh-hhh-----c----ccc----------------cHHHHHHHHHhhhhcCCCC--hhhhhhhhheeeeEEEcCCCccC
Q 024228 164 ESW-VDF-----L----LPK----------------TADALKVQFDIACYKLPTL--PAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 164 ~~~-~~~-----~----~~~----------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
... ... + ... ....+..++.....+.... .......+.||+|++.|++.+.+
T Consensus 181 t~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~ 260 (326)
T KOG2931|consen 181 TQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHV 260 (326)
T ss_pred hhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchh
Confidence 100 000 0 000 1111222222222111100 00111144499999999999875
Q ss_pred CHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 216 DMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
. .+..+..++. .+.++..+.++|-.+..++|..+++.+.=|++..
T Consensus 261 ~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 261 S--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred h--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 3 4555555554 5688999999999999899999999999999754
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.3e-18 Score=124.90 Aligned_cols=169 Identities=15% Similarity=0.117 Sum_probs=100.8
Q ss_pred CCCceEEEeCCCCCcccccHH---HHHHHhhcc-ceEEeecCCCCCCCCCCC-----CC-CChHHHHHHHHHHHHH----
Q 024228 43 TKKHAVVLLHPFGFDGILTWQ---FQVLALAKT-YEVYVPDFLFFGSSVTDR-----PD-RTASFQAECMAKGLRK---- 108 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~-~~v~~~d~~g~G~s~~~~-----~~-~~~~~~~~~~~~~l~~---- 108 (270)
++.|+||++||.+++.. .+. .+...+.+. |.|+++|++|++.+.... .. ........++..+++.
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 45789999999998877 554 244444444 999999999987543211 00 0001122333333333
Q ss_pred h--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhh
Q 024228 109 L--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC 186 (270)
Q Consensus 109 ~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (270)
. +.++++|+|||+||.+++.++.++|+.+.+++.+++................ ........+........
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 161 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM--------CTAATAASVCRLVRGMQ 161 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc--------CCCCCHHHHHHHHhccC
Confidence 2 3358999999999999999999999999999888876532211111100000 01111122222221110
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
.. ......|++++||++|.+||++.++.+.+.+.
T Consensus 162 ~~--------~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 162 SE--------YNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred Cc--------ccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 00 01111457899999999999999888887765
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-17 Score=126.87 Aligned_cols=227 Identities=15% Similarity=0.093 Sum_probs=132.1
Q ss_pred eeEEEeecCC-eEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCCh
Q 024228 22 TQRTIEIEPG-TILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 22 ~~~~i~~~~g-~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
+...+...+| ..+.++.+.. .+.|+||++||++ ++.. .|..+++.|++. +.|+++|+|...+...+. ..
T Consensus 58 ~~~~i~~~~g~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~---~~ 132 (318)
T PRK10162 58 RAYMVPTPYGQVETRLYYPQP-DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEARFPQ---AI 132 (318)
T ss_pred EEEEEecCCCceEEEEECCCC-CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC---cH
Confidence 3444555455 4555555543 3468999999987 4445 777888888774 999999999755433221 23
Q ss_pred HHH---HHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhC------ccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 96 SFQ---AECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 96 ~~~---~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
++. .+.+.+..+.++ .++++|+|+|+||.+|+.++... +.++++++++.|............... ..
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~-~~- 210 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGG-VW- 210 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCC-Cc-
Confidence 332 223333333444 35899999999999999988753 357899999988765432111000000 00
Q ss_pred hhhhhcccccHHHHHHHHHhhhh----cCCCC--h-hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 165 SWVDFLLPKTADALKVQFDIACY----KLPTL--P-AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
..+ ....+..+...... ..... + ...+..-..|+++++|+.|++.+ ..+.+.+.+. ..++++
T Consensus 211 ---~~l---~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 211 ---DGL---TQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred ---ccc---CHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEE
Confidence 000 01111111111000 00000 0 01111223799999999999875 4556665554 258999
Q ss_pred EecCCCcceee-----cchHhHHHHHHHHHHhhh
Q 024228 235 SIEKAGHLVNL-----ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 235 ~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 263 (270)
+++|..|.+.. +..++..+.+.+||++..
T Consensus 283 ~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 283 LYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred EECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 99999998753 223456777888887653
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-16 Score=122.87 Aligned_cols=228 Identities=15% Similarity=0.061 Sum_probs=127.4
Q ss_pred EeecCCeEEEE--EecC-CCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCC-CCCCC-------C---
Q 024228 26 IEIEPGTILNI--WVPK-KTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGS-SVTDR-------P--- 91 (270)
Q Consensus 26 i~~~~g~~l~~--~~~~-~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~-s~~~~-------~--- 91 (270)
+...+|..++- ..+. ..++.|.||.+||.++... .|..........|.++.+|.||.|. +.... .
T Consensus 61 f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSST
T ss_pred EEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-CcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHH
Confidence 33347888864 4454 3345689999999999877 7766665555559999999999993 21110 0
Q ss_pred ---CCC------hHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH
Q 024228 92 ---DRT------ASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA 156 (270)
Q Consensus 92 ---~~~------~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~ 156 (270)
..+ ...+..|....++.+ +.+++.+.|.|+||.+++.+|+..+ +|++++...|...........
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~~~ 218 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRALEL 218 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHHHH
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhhhc
Confidence 011 112344555555543 3458999999999999999999886 699999988765422111111
Q ss_pred hhhhccchhhhhhcc--cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE
Q 024228 157 ALERIGYESWVDFLL--PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME 234 (270)
Q Consensus 157 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 234 (270)
.........+..++. ........+.+....+ .......+.+.+|+++-.|-.|.++|+...-..++.++..+++.
T Consensus 219 ~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y---~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~ 295 (320)
T PF05448_consen 219 RADEGPYPEIRRYFRWRDPHHEREPEVFETLSY---FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELV 295 (320)
T ss_dssp T--STTTHHHHHHHHHHSCTHCHHHHHHHHHHT---T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEE
T ss_pred CCccccHHHHHHHHhccCCCcccHHHHHHHHhh---hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEE
Confidence 110111111111111 0011111122211111 12334455666999999999999999999999999998789999
Q ss_pred EecCCCcceeecchHhH-HHHHHHHHHhh
Q 024228 235 SIEKAGHLVNLERPFVY-NRQLKTILASL 262 (270)
Q Consensus 235 ~~~~~gH~~~~~~~~~~-~~~i~~fl~~~ 262 (270)
+++..||... .+. .+...+||.++
T Consensus 296 vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 296 VYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp EETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred eccCcCCCch----hhHHHHHHHHHHhcC
Confidence 9999999653 333 57777887653
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=115.69 Aligned_cols=157 Identities=15% Similarity=0.198 Sum_probs=104.9
Q ss_pred EEEeCCCCCcccccHHHHH-HHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHH
Q 024228 48 VVLLHPFGFDGILTWQFQV-LALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVG 126 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~~-~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a 126 (270)
|+++||++++....|.... +.|...++|-.+++ ...+.+.+...+.+.+..++ ++++|||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 6899999998776787765 55655577776665 22467888888888777664 579999999999999
Q ss_pred HHHH-hhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeee
Q 024228 127 FKMA-EMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIH 205 (270)
Q Consensus 127 ~~~a-~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 205 (270)
+.++ .....+|+++++++|+............. .+..........|.+
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~-------------------------------~f~~~p~~~l~~~~~ 118 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELD-------------------------------GFTPLPRDPLPFPSI 118 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGC-------------------------------CCTTSHCCHHHCCEE
T ss_pred HHHHhhcccccccEEEEEcCCCcccccchhhhcc-------------------------------ccccCcccccCCCeE
Confidence 9999 66778999999999875421000000000 000000112227789
Q ss_pred EEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 206 LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 206 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
++.+++|+++|.+.++.+++.+ +++++.++++||+...+.-
T Consensus 119 viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G~ 159 (171)
T PF06821_consen 119 VIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNAASGF 159 (171)
T ss_dssp EEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSGGGTH
T ss_pred EEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCcccccCC
Confidence 9999999999999999999999 7999999999998865443
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=121.69 Aligned_cols=178 Identities=19% Similarity=0.230 Sum_probs=106.2
Q ss_pred CCCCCceEEEeCCCCCcccccHHHHHHH-hhcc-ceEEeecCCC------CCC---CCCCC----CC--CChH---HHHH
Q 024228 41 KTTKKHAVVLLHPFGFDGILTWQFQVLA-LAKT-YEVYVPDFLF------FGS---SVTDR----PD--RTAS---FQAE 100 (270)
Q Consensus 41 ~~~~~~~vv~~hG~~~~~~~~~~~~~~~-l~~~-~~v~~~d~~g------~G~---s~~~~----~~--~~~~---~~~~ 100 (270)
..+..++||++||+|++.. .+..+... +... ..+++++-|. .|. +-... .. .+.+ ..++
T Consensus 10 ~~~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SST-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 3356789999999999987 77665552 2222 6677765432 222 11110 00 1122 2233
Q ss_pred HHHHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccH
Q 024228 101 CMAKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (270)
Q Consensus 101 ~~~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
.+.++++.. +.++++|.|+|.||.+|+.++.++|+.+.++|.+++............
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~------------------ 150 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRP------------------ 150 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCH------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccc------------------
Confidence 444444432 446899999999999999999999999999999998765321110000
Q ss_pred HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHH
Q 024228 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYN 252 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~ 252 (270)
. . .. .+|++++||++|+++|.+.++...+.+. .+.+++.+++.||... .+..
T Consensus 151 ------------~-~------~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 151 ------------E-A------LA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp ------------C-C------CC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHH
T ss_pred ------------c-c------cC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHH
Confidence 0 0 00 1799999999999999998888888775 2578999999999874 3445
Q ss_pred HHHHHHHHhh
Q 024228 253 RQLKTILASL 262 (270)
Q Consensus 253 ~~i~~fl~~~ 262 (270)
+.+.+||+++
T Consensus 206 ~~~~~~l~~~ 215 (216)
T PF02230_consen 206 RDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 6788888764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.1e-17 Score=119.91 Aligned_cols=183 Identities=19% Similarity=0.161 Sum_probs=117.7
Q ss_pred EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCC-----------ChHHHHHHHHH
Q 024228 37 WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR-----------TASFQAECMAK 104 (270)
Q Consensus 37 ~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~-----------~~~~~~~~~~~ 104 (270)
..+...++.|.||++|++.|-.. ..+.++..|++. |.|+++|+-+-.......... ..+....++.+
T Consensus 6 ~~P~~~~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (218)
T PF01738_consen 6 ARPEGGGPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQA 84 (218)
T ss_dssp EEETTSSSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHH
T ss_pred EeCCCCCCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHH
Confidence 33444346799999999988776 778889999988 999999986433201111000 12345566656
Q ss_pred HHHHh---C---CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHH
Q 024228 105 GLRKL---G---VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADAL 178 (270)
Q Consensus 105 ~l~~~---~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (270)
.++.+ . .+++.++|+|+||.+++.+|.+. +.+++.+...|......
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~--------------------------- 136 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP--------------------------- 136 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG---------------------------
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc---------------------------
Confidence 66655 2 35899999999999999999887 56999988877111000
Q ss_pred HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecc--------
Q 024228 179 KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLER-------- 247 (270)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~-------- 247 (270)
+.....++.+|+++++|++|+.++.+..+.+.+.+. ...++++++|++|.+....
T Consensus 137 --------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~a 202 (218)
T PF01738_consen 137 --------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAA 202 (218)
T ss_dssp --------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHH
T ss_pred --------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHH
Confidence 001122333899999999999999998888888772 4789999999999997632
Q ss_pred hHhHHHHHHHHHHhh
Q 024228 248 PFVYNRQLKTILASL 262 (270)
Q Consensus 248 ~~~~~~~i~~fl~~~ 262 (270)
.+...+.+.+||+++
T Consensus 203 a~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 203 AEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHhc
Confidence 234556777887654
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.76 E-value=9e-17 Score=119.72 Aligned_cols=210 Identities=16% Similarity=0.153 Sum_probs=133.0
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-ceEEEEEchhH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE-KCTLVGVSYGG 123 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~l~G~S~Gg 123 (270)
++|+|+|+.+++.. .|..+++.|... +.|+.++++|.+ .......+++++++...+.|.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999 999999999998 999999999998 22334478999999998888877655 99999999999
Q ss_pred HHHHHHHhhC---ccccccEEEecccCCCCchhhhHhhhhcc-c-hhhhhhc-----cccc---HHHHHHHHHhhhhcCC
Q 024228 124 MVGFKMAEMY---PDLVESMVVTCSVMGLTESVSNAALERIG-Y-ESWVDFL-----LPKT---ADALKVQFDIACYKLP 190 (270)
Q Consensus 124 ~~a~~~a~~~---p~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~ 190 (270)
.+|..+|.+. ...+..++++++..+.............. . ....... .... .......+........
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQALE 157 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHHh
Confidence 9999999864 33589999999765432111000000000 0 0000000 0000 0111111110000000
Q ss_pred CChhhhhhhhheeeeEEEcCCCccCCHH---HHHHHHHHhcCCceEEEecCCCcceeec-chHhHHHHHHHHH
Q 024228 191 TLPAFVYKHILEKIHLLWGENDKIFDMQ---VARNLKEQVGQNATMESIEKAGHLVNLE-RPFVYNRQLKTIL 259 (270)
Q Consensus 191 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl 259 (270)
...........+|.++.....|+..... ....+.+......+++.++| +|+.++. +..++++.|.++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 158 NYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred hccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 0000000000257888889999887765 34446666655678899985 9999887 6677888888875
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-16 Score=107.42 Aligned_cols=170 Identities=18% Similarity=0.206 Sum_probs=119.2
Q ss_pred CCCCceEEEeCCCC---Cccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHh---CCC
Q 024228 42 TTKKHAVVLLHPFG---FDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKL---GVE 112 (270)
Q Consensus 42 ~~~~~~vv~~hG~~---~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~---~~~ 112 (270)
.+..|..|++|.-+ ++.. .....++..|.+. |.++.+|+||-|+|.+.... ... .+|..+.++.+ ...
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE---~~Da~aaldW~~~~hp~ 101 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGE---LEDAAAALDWLQARHPD 101 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcch---HHHHHHHHHHHHhhCCC
Confidence 45678888888533 2222 2455667888888 99999999999999976533 222 34444444444 222
Q ss_pred --ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCC
Q 024228 113 --KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLP 190 (270)
Q Consensus 113 --~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
.+.|.|+|+|+++++.+|.+.|+ ....+.+.|...... .
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~d--------------------------------f------ 142 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYD--------------------------------F------ 142 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCchh--------------------------------h------
Confidence 24689999999999999999986 666666655443100 0
Q ss_pred CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 191 TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 191 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
..+....+|.++|+|+.|.+++.....++++.. ..+++++++++|+++. +-..+.+.|.+||.
T Consensus 143 ----s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 143 ----SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred ----hhccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 001111278999999999999988888887773 6789999999999864 55668899999985
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-16 Score=118.64 Aligned_cols=232 Identities=18% Similarity=0.148 Sum_probs=148.7
Q ss_pred CCeEEEEEecCCC--CCCceEEEeCCCCCccc--c--------cHHHHH---HHhhcc-ceEEeecCCCCC-CCCCCC--
Q 024228 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGI--L--------TWQFQV---LALAKT-YEVYVPDFLFFG-SSVTDR-- 90 (270)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~--~--------~~~~~~---~~l~~~-~~v~~~d~~g~G-~s~~~~-- 90 (270)
++..+.|...|.- ....+|+++|++.+++. . .|+.++ +.+.-. |-||++|..|.+ .|..+.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 3456778777753 33578999999998655 1 455554 335444 999999999876 333322
Q ss_pred -----------CCCChHHHHHHHHHHHHHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--H
Q 024228 91 -----------PDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--A 156 (270)
Q Consensus 91 -----------~~~~~~~~~~~~~~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~ 156 (270)
+..++.+++..-..++++++++++. ++|-||||+.++.++..+|++|.++|.+++.......... .
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~ 193 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNE 193 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHH
Confidence 1256667777677888999999986 8999999999999999999999999999886554321100 0
Q ss_pred hhh----------------------------hcc------chhhhhhccc----------ccHHHHHHHHHhh-------
Q 024228 157 ALE----------------------------RIG------YESWVDFLLP----------KTADALKVQFDIA------- 185 (270)
Q Consensus 157 ~~~----------------------------~~~------~~~~~~~~~~----------~~~~~~~~~~~~~------- 185 (270)
..+ .+. ...+...+.. .........+...
T Consensus 194 ~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~r 273 (368)
T COG2021 194 VQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVAR 273 (368)
T ss_pred HHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhc
Confidence 000 000 0000000000 0000011111000
Q ss_pred --------------hhcC---CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEec-CCCcceeecc
Q 024228 186 --------------CYKL---PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIE-KAGHLVNLER 247 (270)
Q Consensus 186 --------------~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~ 247 (270)
.+.. .......++.+..|++++.-+.|...|++..+.+.+.++....+++++ ..||..++..
T Consensus 274 fDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e 353 (368)
T COG2021 274 FDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVE 353 (368)
T ss_pred cCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcc
Confidence 0000 001112344455999999999999999999999999998333366664 4699999988
Q ss_pred hHhHHHHHHHHHHh
Q 024228 248 PFVYNRQLKTILAS 261 (270)
Q Consensus 248 ~~~~~~~i~~fl~~ 261 (270)
.+.+...|.+||+.
T Consensus 354 ~~~~~~~i~~fL~~ 367 (368)
T COG2021 354 SEAVGPLIRKFLAL 367 (368)
T ss_pred hhhhhHHHHHHhhc
Confidence 88899999999974
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-17 Score=115.75 Aligned_cols=172 Identities=18% Similarity=0.209 Sum_probs=117.3
Q ss_pred CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCC--CCC----CCCCCCCCChHHH-------HHHHHHHHHH
Q 024228 42 TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLF--FGS----SVTDRPDRTASFQ-------AECMAKGLRK 108 (270)
Q Consensus 42 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g--~G~----s~~~~~~~~~~~~-------~~~~~~~l~~ 108 (270)
.+..|+||++||.|++.. .+.++...+..++.++.+.-+= .|. +......++.+++ ++.+..+.+.
T Consensus 15 ~p~~~~iilLHG~Ggde~-~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDEL-DLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChh-hhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 355778999999999888 7777666666666666653210 010 0011112333332 3344444455
Q ss_pred hCC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhh
Q 024228 109 LGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC 186 (270)
Q Consensus 109 ~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (270)
.+. ++++++|+|.||.+++.+..++|+.+++++++++..........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~------------------------------- 142 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLP------------------------------- 142 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcccc-------------------------------
Confidence 554 78999999999999999999999999999999987764321000
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
..-..|+++++|+.|+++|...+.++.+.+. .+++.+.++ .||....+ -.+.+.+|+.+
T Consensus 143 -----------~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e----~~~~~~~wl~~ 204 (207)
T COG0400 143 -----------DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPE----ELEAARSWLAN 204 (207)
T ss_pred -----------ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHH----HHHHHHHHHHh
Confidence 0000799999999999999998888877765 467888888 79987543 34556667754
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-15 Score=110.11 Aligned_cols=196 Identities=18% Similarity=0.126 Sum_probs=140.7
Q ss_pred eEEEeecCCeEEE-EE-ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCC-------C
Q 024228 23 QRTIEIEPGTILN-IW-VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDR-------P 91 (270)
Q Consensus 23 ~~~i~~~~g~~l~-~~-~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~-------~ 91 (270)
...+..++ ..+. |. .+....+.|.||++|++.+-.. ..+..++.|++. |.++++|+-+. |.+.... .
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 34555654 4443 33 3333334489999999999888 999999999999 99999998763 3222211 0
Q ss_pred ----CCChHHHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc
Q 024228 92 ----DRTASFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161 (270)
Q Consensus 92 ----~~~~~~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~ 161 (270)
..+......|+.+.++.+. .+++.++|+||||.+++.++.+.| .+++.+...+.........
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~~------- 153 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTAD------- 153 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcccc-------
Confidence 1223566778887777763 457999999999999999999987 6999888876554211100
Q ss_pred cchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecC
Q 024228 162 GYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEK 238 (270)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~ 238 (270)
..+..+|+|+..|+.|..+|.+....+.+.+.. ..++.++++
T Consensus 154 -----------------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~g 198 (236)
T COG0412 154 -----------------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPG 198 (236)
T ss_pred -----------------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCC
Confidence 112238999999999999999988888887762 478899999
Q ss_pred CCcceeecc-----------hHhHHHHHHHHHHhhh
Q 024228 239 AGHLVNLER-----------PFVYNRQLKTILASLV 263 (270)
Q Consensus 239 ~gH~~~~~~-----------~~~~~~~i~~fl~~~~ 263 (270)
+.|.++.+. .+.-++.+.+||++..
T Consensus 199 a~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 199 AGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 989988432 2446677888888764
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=125.80 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=84.1
Q ss_pred CCCceEEEeCCCCCccc-ccHHH-HHHHhh--c-cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CC
Q 024228 43 TKKHAVVLLHPFGFDGI-LTWQF-QVLALA--K-TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------GV 111 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~-~~~~~-~~~~l~--~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~------~~ 111 (270)
.++|++|++||++++.. ..|.. +.+.|. + +++|+++|++|+|.+..+........+++++.++++.+ +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 35799999999987542 25665 555553 2 39999999999998876544444566677777777765 36
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
++++|+||||||.+|..++.+.|++|.++++++|..+.
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 79999999999999999999999999999999997653
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-15 Score=108.14 Aligned_cols=180 Identities=17% Similarity=0.159 Sum_probs=111.1
Q ss_pred EEEeCCCCCcccccHH--HHHHHhhcc---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchh
Q 024228 48 VVLLHPFGFDGILTWQ--FQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~--~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~G 122 (270)
|+++||+.++.. ... .+.+.+++. ..+.++|++ ...+...+.+.++++....+.+.|+|.|+|
T Consensus 2 ilYlHGF~Ssp~-S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSPQ-SFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCCC-CHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 799999999887 443 344556554 566777765 456777788889999888778999999999
Q ss_pred HHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhe
Q 024228 123 GMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE 202 (270)
Q Consensus 123 g~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (270)
|+.|..+|.+++ +++ |+++|...+........-..... ....... -......... ...... .....
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~-~~~e~~~-~~~~~~~~l~---~l~~~~------~~~~~ 135 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNP-YTGESYE-LTEEHIEELK---ALEVPY------PTNPE 135 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccC-CCCccce-echHhhhhcc---eEeccc------cCCCc
Confidence 999999999885 555 88898876543332211110000 0000000 0000000000 000000 11116
Q ss_pred eeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 203 KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 203 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
+++++.++.|++++.+.+. +... ++..++.+|++|-+. +-++....|.+|+
T Consensus 136 ~~lvll~~~DEvLd~~~a~---~~~~-~~~~~i~~ggdH~f~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 136 RYLVLLQTGDEVLDYREAV---AKYR-GCAQIIEEGGDHSFQ--DFEEYLPQIIAFL 186 (187)
T ss_pred cEEEEEecCCcccCHHHHH---HHhc-CceEEEEeCCCCCCc--cHHHHHHHHHHhh
Confidence 8999999999999985543 3343 455556678899874 4556667788776
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.7e-15 Score=114.41 Aligned_cols=215 Identities=15% Similarity=0.117 Sum_probs=140.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
.|+||++..+.+.....-+.+.+.|.+.+.|+..|+..-+..+......+++++++-+.+.+++++.+ +.++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37999999988665523355677777789999999987765554556789999999999999999876 99999999999
Q ss_pred HHHHHHhhC-----ccccccEEEecccCCCCch--hhhHhh--------hhc------------c---chhhh--hhc--
Q 024228 125 VGFKMAEMY-----PDLVESMVVTCSVMGLTES--VSNAAL--------ERI------------G---YESWV--DFL-- 170 (270)
Q Consensus 125 ~a~~~a~~~-----p~~v~~~i~~~~~~~~~~~--~~~~~~--------~~~------------~---~~~~~--~~~-- 170 (270)
.++.+++.. |.+++.+++++++.++... ...... ... + ..... ..+
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 977666654 6679999999998776432 111110 000 0 00000 000
Q ss_pred -ccc-------------------cHHHHHHHHHhhhhcCCCChhh---------------------------hhhhhh-e
Q 024228 171 -LPK-------------------TADALKVQFDIACYKLPTLPAF---------------------------VYKHIL-E 202 (270)
Q Consensus 171 -~~~-------------------~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~-~ 202 (270)
.+. .......++.. .......+.+ .+.++. +
T Consensus 261 mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~-y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDE-YLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHH-hhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 000 00000001110 0000111111 122222 8
Q ss_pred eeeEEEcCCCccCCHHHHHHHHHHh---c-CCceEEEecCCCcceeec---chHhHHHHHHHHHHh
Q 024228 203 KIHLLWGENDKIFDMQVARNLKEQV---G-QNATMESIEKAGHLVNLE---RPFVYNRQLKTILAS 261 (270)
Q Consensus 203 P~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~ 261 (270)
|+|.+.|++|.++|++.+..+.+.+ + .+.+.++.+++||...+. -.+++...|.+||.+
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 9999999999999999999988875 4 345677787899999873 357789999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-15 Score=125.77 Aligned_cols=216 Identities=12% Similarity=0.063 Sum_probs=134.3
Q ss_pred CceeEEEeecCCeEEEEE-ecCC----CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC---
Q 024228 20 GMTQRTIEIEPGTILNIW-VPKK----TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD--- 89 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~-~~~~----~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~--- 89 (270)
..+..+++..||.++.++ ...+ ..+.|.||++||..+... ..|......|.++ |.|+.++.||.|.-...
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 345666777799998763 2211 234699999999887664 3566656666666 99999999997644321
Q ss_pred -----CCCCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc
Q 024228 90 -----RPDRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 90 -----~~~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
....+++++++.+..+++. .+.+++.+.|.|.||+++..++.++|++++++|...|..+....+..... ...
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~-p~~ 573 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESI-PLT 573 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCC-CCC
Confidence 1224455555555444443 13568999999999999999999999999999999888764322110000 000
Q ss_pred chhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee-eeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEe--
Q 024228 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK-IHLLWGENDKIFDMQVARNLKEQVG---QNATMESI-- 236 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~-- 236 (270)
......+-.+........+.... |-..+.+...| +|+++|.+|.-||+..+.++...+. ...+++++
T Consensus 574 ~~~~~e~G~p~~~~~~~~l~~~S-------P~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~ 646 (686)
T PRK10115 574 TGEFEEWGNPQDPQYYEYMKSYS-------PYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCT 646 (686)
T ss_pred hhHHHHhCCCCCHHHHHHHHHcC-------chhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEe
Confidence 00111111122111111111111 11122333467 6677999999999999998888875 24567777
Q ss_pred -cCCCcce
Q 024228 237 -EKAGHLV 243 (270)
Q Consensus 237 -~~~gH~~ 243 (270)
+++||..
T Consensus 647 ~~~~GHg~ 654 (686)
T PRK10115 647 DMDSGHGG 654 (686)
T ss_pred cCCCCCCC
Confidence 8999984
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.2e-14 Score=101.02 Aligned_cols=221 Identities=15% Similarity=0.185 Sum_probs=120.7
Q ss_pred eEEEeecCCeEEEEEecCCC----CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCCCCCChH
Q 024228 23 QRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRTAS 96 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~~~~~~~ 96 (270)
.+.+.+.+|..+++|...+. ...++||+.+|++-..+ .|..++.+|+.+ |+|+.+|.-.| |.|++....+++.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 46678889999999976653 24589999999999999 999999999999 99999999877 9999888889998
Q ss_pred HHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhhhc
Q 024228 97 FQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVDFL 170 (270)
Q Consensus 97 ~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 170 (270)
...+++..+++.+ +..++.|+.-|..|.+|+..|.+- .+.-+|..-+...............+ .........
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dl 160 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDL 160 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEE
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcc
Confidence 8888888777765 677899999999999999999854 37777776655543322111110000 000000000
Q ss_pred --ccccHHHHHHHHHhhhhcCCCCh----hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcce
Q 024228 171 --LPKTADALKVQFDIACYKLPTLP----AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLV 243 (270)
Q Consensus 171 --~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 243 (270)
..... .... +........|.. ....+.+.+|++.+++++|.+|......++...+. ..++++.++|++|..
T Consensus 161 dfeGh~l-~~~v-Fv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 161 DFEGHNL-GAEV-FVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp EETTEEE-EHHH-HHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred ccccccc-chHH-HHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh
Confidence 00000 0111 222222333332 22344455999999999999999998888887765 457899999999987
Q ss_pred eecchH
Q 024228 244 NLERPF 249 (270)
Q Consensus 244 ~~~~~~ 249 (270)
-|++.
T Consensus 239 -~enl~ 243 (294)
T PF02273_consen 239 -GENLV 243 (294)
T ss_dssp -TSSHH
T ss_pred -hhChH
Confidence 35543
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-16 Score=119.63 Aligned_cols=117 Identities=17% Similarity=0.102 Sum_probs=82.8
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHH-HHH-Hhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQF-QVL-ALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~-~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
+..+.+.... +++|++|++||++++....|.. +.. .+.+. ++|+++|+++++.+.......+...+.+++..+++
T Consensus 24 ~~~~~~~~f~--~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 24 PSSLKNSNFN--PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLD 101 (275)
T ss_pred hhhhhhcCCC--CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHH
Confidence 4444443333 3579999999999987326654 444 34444 99999999987433322222344455566666665
Q ss_pred Hh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 108 KL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 108 ~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.+ +.++++++|||+||.+|..++.+.|++|+++++++|..+.
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 54 3468999999999999999999999999999999987654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-15 Score=107.07 Aligned_cols=232 Identities=19% Similarity=0.164 Sum_probs=145.2
Q ss_pred CCceeEEEeec--CCeEEEEEe--cCCC-CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC---
Q 024228 19 VGMTQRTIEIE--PGTILNIWV--PKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--- 90 (270)
Q Consensus 19 ~~~~~~~i~~~--~g~~l~~~~--~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--- 90 (270)
..++.-.++.+ +|.+|.-|. +... ...|.||-.||+++..+ .|..+...-...|.|+.+|.||.|.|....
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~ 130 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADP 130 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-CccccccccccceeEEEEecccCCCccccCCCC
Confidence 34444444433 788887553 4433 45689999999999998 887777666666999999999999874311
Q ss_pred -CC-----------------CChHHHHHHHHHHHHH------hCCCceEEEEEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 91 -PD-----------------RTASFQAECMAKGLRK------LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 91 -~~-----------------~~~~~~~~~~~~~l~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
.. +.......|+..+++. .+.+++.+.|.|.||.+++.+++..| +|++++.+-|.
T Consensus 131 p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pf 209 (321)
T COG3458 131 PGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPF 209 (321)
T ss_pred CCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccc
Confidence 10 0111123444444443 35679999999999999999988876 69999988877
Q ss_pred CCCCchhhhHhhhhccchhh---hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHH
Q 024228 147 MGLTESVSNAALERIGYESW---VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNL 223 (270)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 223 (270)
..--........ .-....+ .+...+.....+.. +. . .........+.+|+|+..|-.|+++|+...-..
T Consensus 210 l~df~r~i~~~~-~~~ydei~~y~k~h~~~e~~v~~T-L~--y----fD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~ 281 (321)
T COG3458 210 LSDFPRAIELAT-EGPYDEIQTYFKRHDPKEAEVFET-LS--Y----FDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAA 281 (321)
T ss_pred cccchhheeecc-cCcHHHHHHHHHhcCchHHHHHHH-Hh--h----hhhhhHHHhhccceEEeecccCCCCCChhhHHH
Confidence 542221111100 0000011 11111111111111 11 0 112233455569999999999999999999999
Q ss_pred HHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 224 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++++...+++.+++.-+|... |.-..+.+..|++...
T Consensus 282 yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 282 YNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKILF 318 (321)
T ss_pred hhcccCCceEEEeeccccccC---cchhHHHHHHHHHhhc
Confidence 999987788888887777543 4444566777776543
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-14 Score=102.19 Aligned_cols=232 Identities=17% Similarity=0.088 Sum_probs=142.0
Q ss_pred EEEeecCCeEEEEEecCCCCCCc-eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC---CChHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKH-AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD---RTASFQ 98 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~-~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~---~~~~~~ 98 (270)
..+...||..+........+..+ .+++-.+.+.... .|++++..+++. |.|+++|+||.|.|...... ....++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 44666799988766555434444 4444445555555 889999999988 99999999999999876543 445555
Q ss_pred H-HHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh-hhhcc--------ch
Q 024228 99 A-ECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-LERIG--------YE 164 (270)
Q Consensus 99 ~-~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-~~~~~--------~~ 164 (270)
+ .|+.+.++.++ .-+..++|||+||.+...+.. ++ +..+....+........+.... ..... ..
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt 164 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLT 164 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccchhhhhcccceeeccccccchh
Confidence 3 36666666553 348999999999988765544 34 5666666555544433222110 00000 00
Q ss_pred hhh----hhc--cc--ccHHHHHHHHHhhhhcCCCC-------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC
Q 024228 165 SWV----DFL--LP--KTADALKVQFDIACYKLPTL-------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ 229 (270)
Q Consensus 165 ~~~----~~~--~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 229 (270)
.+. ..+ .. .....++++..........+ ..+..+...+|+.++...+|+.+|+...+.+.+..+
T Consensus 165 ~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~- 243 (281)
T COG4757 165 FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYR- 243 (281)
T ss_pred hccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhh-
Confidence 000 000 01 11112223322222221111 233455556999999999999999999999988877
Q ss_pred Cc--eEEEecC----CCcceeecch-HhHHHHHHHHH
Q 024228 230 NA--TMESIEK----AGHLVNLERP-FVYNRQLKTIL 259 (270)
Q Consensus 230 ~~--~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 259 (270)
++ +...++. -||+-...++ |.+.+.+.+|+
T Consensus 244 nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 244 NAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 44 4455544 4999988777 77888888776
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.9e-15 Score=123.04 Aligned_cols=121 Identities=18% Similarity=0.116 Sum_probs=90.8
Q ss_pred eecCCeEEEEE--ecCCCCCCceEEEeCCCCCccc--ccH-HHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHH
Q 024228 27 EIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGI--LTW-QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAE 100 (270)
Q Consensus 27 ~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~--~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 100 (270)
+..||.+|++. .+...++.|+||++||++.+.. ..+ ......|.++ |.|+++|+||+|.|.......+ ...++
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~ 80 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAA 80 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccch
Confidence 45689888754 3333345789999999987642 012 1234566666 9999999999999987644333 45677
Q ss_pred HHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 101 CMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 101 ~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|+.++++.+. ..+++++|+|+||.+++.+|..+|++++++|..++...
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 8888877763 24899999999999999999999999999999887654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=106.74 Aligned_cols=186 Identities=17% Similarity=0.138 Sum_probs=99.9
Q ss_pred EEEeCCCCCccc--ccHHHHHHHhhc-c-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH----H-----hCCCce
Q 024228 48 VVLLHPFGFDGI--LTWQFQVLALAK-T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR----K-----LGVEKC 114 (270)
Q Consensus 48 vv~~hG~~~~~~--~~~~~~~~~l~~-~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~----~-----~~~~~~ 114 (270)
||++||++.... .....++..+++ . +.|+.+|||-.. ........+|+.+.++ . .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p-------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP-------EAPFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT-------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc-------cccccccccccccceeeeccccccccccccce
Confidence 789999875433 144556666665 4 999999999432 2233444555544443 3 345689
Q ss_pred EEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC-
Q 024228 115 TLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL- 189 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (270)
+|+|+|.||.+++.++....+ .++++++++|.................... ...+.......+...+.......
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 152 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKD-DPFLPAPKIDWFWKLYLPGSDRDD 152 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHST-TSSSBHHHHHHHHHHHHSTGGTTS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccc-cccccccccccccccccccccccc
Confidence 999999999999999876433 489999999976541110011100000000 00001111111111111111111
Q ss_pred CCC-hhh--hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCccee
Q 024228 190 PTL-PAF--VYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVN 244 (270)
Q Consensus 190 ~~~-~~~--~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~ 244 (270)
... +.. .... ..|+++++|+.|.+++ ....+.+.+. .+++++++++.+|.+.
T Consensus 153 ~~~sp~~~~~~~~-~Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 153 PLASPLNASDLKG-LPPTLIIHGEDDVLVD--DSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp TTTSGGGSSCCTT-CHEEEEEEETTSTTHH--HHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred ccccccccccccc-CCCeeeeccccccchH--HHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 111 110 1111 3799999999998864 5556666654 3578999999999764
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.6e-14 Score=108.65 Aligned_cols=242 Identities=19% Similarity=0.207 Sum_probs=153.6
Q ss_pred CceeEEEeecCCeEEEEEe-cCCCCCCceEEEeCCCCCcccccHHH------HHHHhhcc-ceEEeecCCCCCCCCCCC-
Q 024228 20 GMTQRTIEIEPGTILNIWV-PKKTTKKHAVVLLHPFGFDGILTWQF------QVLALAKT-YEVYVPDFLFFGSSVTDR- 90 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~-~~~~~~~~~vv~~hG~~~~~~~~~~~------~~~~l~~~-~~v~~~d~~g~G~s~~~~- 90 (270)
..+.+.|++.||..+.... +....++|+|++.||+..++. .|-. ++=.|++. |.|+.-+.||.-.|....
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~ 125 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKK 125 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcCcccchhhcc
Confidence 4789999999999776633 333367899999999999988 7753 34456777 999999999976664321
Q ss_pred ---------CCCChHHHH-HHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCCCc--
Q 024228 91 ---------PDRTASFQA-ECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGLTE-- 151 (270)
Q Consensus 91 ---------~~~~~~~~~-~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~~~-- 151 (270)
-++++++++ .|+-+.|+.+ +.++++.+|||.|+.....++...|+ +|+.+++++|......
T Consensus 126 l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~ 205 (403)
T KOG2624|consen 126 LSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIK 205 (403)
T ss_pred cCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccc
Confidence 125555543 3666666554 67899999999999999998888875 7999999999874330
Q ss_pred hhhhHhhhhc-----------cc----------hhhhhhccc--------------------------------------
Q 024228 152 SVSNAALERI-----------GY----------ESWVDFLLP-------------------------------------- 172 (270)
Q Consensus 152 ~~~~~~~~~~-----------~~----------~~~~~~~~~-------------------------------------- 172 (270)
.......... +. .........
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pa 285 (403)
T KOG2624|consen 206 SLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPA 285 (403)
T ss_pred cHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCC
Confidence 1100000000 00 000000000
Q ss_pred -ccHHHHH---HHHHhh--------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE
Q 024228 173 -KTADALK---VQFDIA--------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME 234 (270)
Q Consensus 173 -~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 234 (270)
.+...+. +..... .+.....|...+..+.+|+.+.+|++|.++.++..+.+...++ +....
T Consensus 286 gtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~-~~~~~ 364 (403)
T KOG2624|consen 286 GTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLP-NSVIK 364 (403)
T ss_pred CccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcc-ccccc
Confidence 0000000 000000 0011111222223333899999999999999999998888877 33322
Q ss_pred ---EecCCCcceee---cchHhHHHHHHHHHHhhh
Q 024228 235 ---SIEKAGHLVNL---ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 235 ---~~~~~gH~~~~---~~~~~~~~~i~~fl~~~~ 263 (270)
.+++-.|..++ +.++++.+.|.+.++...
T Consensus 365 ~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 365 YIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 26888998876 568889999998887654
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-13 Score=110.93 Aligned_cols=207 Identities=14% Similarity=0.135 Sum_probs=131.1
Q ss_pred CCeEEEEEecCC-CCCCceEEEeCCCCCcccccH-----HHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 30 PGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 30 ~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
+-.++..|.+.. ..-+++||+++.+-.... .+ +.++++|.++ +.|+.+|+++-+... ...+++++++.+
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i 274 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDAL 274 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhh-eeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHH
Confidence 334554444432 234689999999885544 45 4678888888 999999999765543 446778888777
Q ss_pred HHHHHHh----CCCceEEEEEchhHHHHHH----HHhhCcc-ccccEEEecccCCCCchh-hh------------Hhhhh
Q 024228 103 AKGLRKL----GVEKCTLVGVSYGGMVGFK----MAEMYPD-LVESMVVTCSVMGLTESV-SN------------AALER 160 (270)
Q Consensus 103 ~~~l~~~----~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~i~~~~~~~~~~~~-~~------------~~~~~ 160 (270)
.+.++.+ +.+++.++|+|+||.+++. +++++++ +|++++++.+..++.... .. .....
T Consensus 275 ~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~ 354 (560)
T TIGR01839 275 KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ 354 (560)
T ss_pred HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh
Confidence 7777665 5678999999999999987 7888885 799999998877654211 00 00000
Q ss_pred ccc------hhhhhhccccc-------------------------------H-HHHHHHHHhhhhcCCCC----------
Q 024228 161 IGY------ESWVDFLLPKT-------------------------------A-DALKVQFDIACYKLPTL---------- 192 (270)
Q Consensus 161 ~~~------~~~~~~~~~~~-------------------------------~-~~~~~~~~~~~~~~~~~---------- 192 (270)
.+. ......+.+.. . ....+++. .+.....
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~--ly~~N~L~~pG~l~v~G 432 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLD--MFKSNPLTRPDALEVCG 432 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHH--HHhcCCCCCCCCEEECC
Confidence 000 00000000000 0 00111111 1111000
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcce
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 243 (270)
..-.+.++.+|++++.|++|.++|++.+..+.+.+.++.+++..+ +||..
T Consensus 433 ~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIg 482 (560)
T TIGR01839 433 TPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQ 482 (560)
T ss_pred EEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccc
Confidence 112234444999999999999999999999999988677777776 58875
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.3e-13 Score=89.48 Aligned_cols=181 Identities=14% Similarity=0.078 Sum_probs=123.7
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCC-----CCCCCCCCC-CChHHHHHHHHHHHHHhCCCceE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFF-----GSSVTDRPD-RTASFQAECMAKGLRKLGVEKCT 115 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~-----G~s~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~ 115 (270)
..-+||+.||.+.+.+ ......+..|+.. +.|..|+++.. |...+++.. .-...+...+.++.+.+...+.+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 3457889999998777 3556677888888 99999998753 322222222 33345566677777777777999
Q ss_pred EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhh
Q 024228 116 LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAF 195 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (270)
+-|+||||.++...+....-.|+++++++-+...+..... ....
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~------------------------------------~Rt~ 136 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ------------------------------------LRTE 136 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc------------------------------------chhh
Confidence 9999999999998887765559999998865543322111 0111
Q ss_pred hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee----------cchHhHHHHHHHHHHhh
Q 024228 196 VYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL----------ERPFVYNRQLKTILASL 262 (270)
Q Consensus 196 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----------~~~~~~~~~i~~fl~~~ 262 (270)
.+..+.+|++|.+|+.|++-..+.+..+. +....++++++++.|..-- ++-...++.|..|..++
T Consensus 137 HL~gl~tPtli~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 137 HLTGLKTPTLITQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred hccCCCCCeEEeecccccccCHHHHHhhh--cCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 23344489999999999998776663332 3347899999999998632 22344667777777654
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=87.86 Aligned_cols=76 Identities=24% Similarity=0.200 Sum_probs=64.8
Q ss_pred CeEEEEEecCCCC-CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTT-KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~ 107 (270)
|.+|++....++. .+.+|+++||++..+. .|..+++.|+++ |.|+++|+||||.|+..... .+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5677776655544 4889999999999999 999999999999 99999999999999976544 788999999988764
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.7e-13 Score=102.02 Aligned_cols=120 Identities=23% Similarity=0.322 Sum_probs=97.8
Q ss_pred EEeecCCeEEEEEecCCC-----CCCceEEEeCCCCCcccccHHHHHHHhhc--------c--ceEEeecCCCCCCCCCC
Q 024228 25 TIEIEPGTILNIWVPKKT-----TKKHAVVLLHPFGFDGILTWQFQVLALAK--------T--YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--------~--~~v~~~d~~g~G~s~~~ 89 (270)
+.++ .|.++|+.....+ ..-.+++++|||+|+.. .|-.+++.|.+ . |.|+++.+||+|.|+.+
T Consensus 128 kTeI-eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~ 205 (469)
T KOG2565|consen 128 KTEI-EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP 205 (469)
T ss_pred hhhh-cceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC
Confidence 3344 5888887544332 22358999999999999 88788887753 2 89999999999999987
Q ss_pred CC-CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 90 RP-DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 90 ~~-~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
.. .++....+.-+..++-.++.+++.+-|-.||+.++..+|..+|++|.|+=+--+.
T Consensus 206 sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 206 SKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred ccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 74 4888888889999999999999999999999999999999999999887654433
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.6e-13 Score=91.16 Aligned_cols=172 Identities=15% Similarity=0.069 Sum_probs=116.5
Q ss_pred ceEEEeCCCCCcccccHHHHHH-HhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVL-ALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~-~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
+.+|++||+.++....|+...+ .+. .+-.+++. .......++|++.+.+.+... .++++||+||+|+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 5689999999887757765432 222 22223322 123357888888888888877 46799999999999
Q ss_pred HHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheee
Q 024228 125 VGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKI 204 (270)
Q Consensus 125 ~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 204 (270)
+++.++......|.|+++++|+-............ ...... .....-|.
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~-----------------------tf~~~p--------~~~lpfps 120 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLM-----------------------TFDPIP--------REPLPFPS 120 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCccccccchhhcc-----------------------ccCCCc--------cccCCCce
Confidence 99999998877899999999875432211110000 000000 11222689
Q ss_pred eEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec---chHhHHHHHHHHHHh
Q 024228 205 HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE---RPFVYNRQLKTILAS 261 (270)
Q Consensus 205 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~ 261 (270)
+++.+.+|++++++.++.+++.+ ...++.+..+||..-.. .=.+....+.+|+.+
T Consensus 121 ~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 121 VVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred eEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 99999999999999999999998 47888888899986432 113345666666654
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.1e-12 Score=97.48 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=84.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhh----ccceEEeecCCCCCCCCCC------CCCCChHHHHHHHHHHHHHh-----
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALA----KTYEVYVPDFLFFGSSVTD------RPDRTASFQAECMAKGLRKL----- 109 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~l~~~----- 109 (270)
+..+++++|.+|-.+ .|..++..|. .++.|+++.+.||-.++.. ...+++++.++-..++++++
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 567999999999999 9999887776 3399999999999777654 23478888877777776654
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCc---cccccEEEecccCC
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMG 148 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~ 148 (270)
...+++|+|||.|++++++++.+.+ .+|.+++++-|...
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 2347999999999999999999998 68999999988753
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.4e-12 Score=97.70 Aligned_cols=211 Identities=15% Similarity=0.167 Sum_probs=124.6
Q ss_pred CCCceEEEeCCCCCcccccHHH--H-HHHhhcc-ceEEeecCCCCCCCCCCCCC----CChHHH----------HHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQF--Q-VLALAKT-YEVYVPDFLFFGSSVTDRPD----RTASFQ----------AECMAK 104 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~--~-~~~l~~~-~~v~~~d~~g~G~s~~~~~~----~~~~~~----------~~~~~~ 104 (270)
+.+|.+|.++|.|... .|++ + +..|.+. +..+.+..|-||...+.... .+..++ +..+..
T Consensus 90 ~~rp~~IhLagTGDh~--f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG--FWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CCCceEEEecCCCccc--hhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 4578899999988754 4433 3 4555555 99999999999987654322 222222 223344
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhh------------c--
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDF------------L-- 170 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-- 170 (270)
+++.-+..++.+.|.||||.+|..+|...|..+..+-++++.................+...... .
T Consensus 168 Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~ 247 (348)
T PF09752_consen 168 WLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPA 247 (348)
T ss_pred HHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhccccc
Confidence 55555888999999999999999999999987766666655432111000000000001000000 0
Q ss_pred ------------ccccHHHHHHHH--HhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEe
Q 024228 171 ------------LPKTADALKVQF--DIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESI 236 (270)
Q Consensus 171 ------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
.....+...... .........++... -...+.++.+++|.+||......+.+..| ++++..+
T Consensus 248 ~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~---dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP-GsEvR~l 323 (348)
T PF09752_consen 248 QNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPV---DPSAIIFVAAKNDAYVPRHGVLSLQEIWP-GSEVRYL 323 (348)
T ss_pred CcccccchhhccccchHHHHHHHHHHHHhhccccccCCCC---CCCcEEEEEecCceEechhhcchHHHhCC-CCeEEEe
Confidence 000000000000 00000000000000 00357899999999999999999999998 9999999
Q ss_pred cCCCcceee-cchHhHHHHHHHHHH
Q 024228 237 EKAGHLVNL-ERPFVYNRQLKTILA 260 (270)
Q Consensus 237 ~~~gH~~~~-~~~~~~~~~i~~fl~ 260 (270)
++ ||..-+ -+.+.+.+.|.+-++
T Consensus 324 ~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 324 PG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cC-CcEEEeeechHHHHHHHHHHhh
Confidence 86 998754 667778888887664
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-11 Score=95.21 Aligned_cols=231 Identities=13% Similarity=0.100 Sum_probs=135.1
Q ss_pred ceeEEEeec--CCeEEEEEecCCC---CCCceEEEeCCCCCccc----ccHHHHHHHhhcc--ceEEeecCCCCCCCCCC
Q 024228 21 MTQRTIEIE--PGTILNIWVPKKT---TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT--YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 21 ~~~~~i~~~--~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~ 89 (270)
+....+... ++..++.+.+... ...|.||++||+|.... ..|..+...+++. ..|+++|||---+..-+
T Consensus 61 v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P 140 (336)
T KOG1515|consen 61 VTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP 140 (336)
T ss_pred ceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC
Confidence 333444444 5667777776653 34689999999874222 3777888888666 88999999944433322
Q ss_pred CCCCChHHHHHHHHHHHHH------hCCCceEEEEEchhHHHHHHHHhhC------ccccccEEEecccCCCCchhhhHh
Q 024228 90 RPDRTASFQAECMAKGLRK------LGVEKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~------~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
...++..+.+..+.+. .+.++++|+|-|.||.+|..+|.+. +.++++.|++.|............
T Consensus 141 ---a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~ 217 (336)
T KOG1515|consen 141 ---AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEK 217 (336)
T ss_pred ---ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHH
Confidence 3344444444444442 3567899999999999999888763 347999999999876544333222
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhh---h---cCCCChh-------hhhhhhheeeeEEEcCCCccCCHHHHHHHH
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIAC---Y---KLPTLPA-------FVYKHILEKIHLLWGENDKIFDMQVARNLK 224 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 224 (270)
....... ..........++.... . ...+... ........|++++.++.|.+.. ....+.
T Consensus 218 ~~~~~~~------~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D--~~~~Y~ 289 (336)
T KOG1515|consen 218 QQNLNGS------PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRD--EGLAYA 289 (336)
T ss_pred HHhhcCC------cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhh--hhHHHH
Confidence 1111110 0011111111111000 0 0000000 0111122679999999998864 444444
Q ss_pred HHhc---CCceEEEecCCCcceeecch-----HhHHHHHHHHHHhh
Q 024228 225 EQVG---QNATMESIEKAGHLVNLERP-----FVYNRQLKTILASL 262 (270)
Q Consensus 225 ~~~~---~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 262 (270)
+++. -.+++..++++.|.++.-.+ .++.+.+.+|+++.
T Consensus 290 ~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 290 EKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 4443 24566789999999987433 45667778887653
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.3e-13 Score=98.33 Aligned_cols=183 Identities=19% Similarity=0.179 Sum_probs=114.1
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH----
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK---- 108 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~---- 108 (270)
+-++.+.....-|++||+||+..... .|..+.++++++ |-|+.+|+...+...............+++.+-++.
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccc
Confidence 44455656567899999999997766 899999999999 999999976533311111111112222222221111
Q ss_pred ---hCCCceEEEEEchhHHHHHHHHhhC-----ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHH
Q 024228 109 ---LGVEKCTLVGVSYGGMVGFKMAEMY-----PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKV 180 (270)
Q Consensus 109 ---~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (270)
.+..++.|.|||.||-+|..++..+ +.+++++++++|+......... .+...
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~---------------~P~v~----- 144 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT---------------EPPVL----- 144 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC---------------CCccc-----
Confidence 1345899999999999999999887 4589999999998642211000 00000
Q ss_pred HHHhhhhcCCCChhhhhhhhheeeeEEEcCCCc---------cCCHH-HHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 181 QFDIACYKLPTLPAFVYKHILEKIHLLWGENDK---------IFDMQ-VARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
.+. ...-++..|+++|-..-+. ..|.. .-+++++......-..+..++||+-+++..
T Consensus 145 -----~~~------p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 145 -----TYT------PQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred -----cCc------ccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 000 0011122799999777664 22322 446677777656667777889999988654
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=115.30 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=82.9
Q ss_pred EEeecCCeEEEEEecCC--------CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCC------
Q 024228 25 TIEIEPGTILNIWVPKK--------TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD------ 89 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~--------~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~------ 89 (270)
.+..+++.++.|...+. ..+.|+||++||++++.. .|..+++.|.+. |+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 34445677776654322 123468999999999999 999999999866 99999999999999433
Q ss_pred ---CC--------------CCChHHHHHHHHHHHHHhC----------------CCceEEEEEchhHHHHHHHHhh
Q 024228 90 ---RP--------------DRTASFQAECMAKGLRKLG----------------VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 90 ---~~--------------~~~~~~~~~~~~~~l~~~~----------------~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.. ..++.+.+.|+..+...+. ..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 10 1267888889888877775 3489999999999999999875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.1e-13 Score=122.79 Aligned_cols=197 Identities=12% Similarity=0.043 Sum_probs=124.5
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~G 122 (270)
++++++++||++++.. .|..+.+.|...+.|+.++.+|++.+. ....+++.+++++.+.++.+.. .+++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchH-HHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 3578999999999998 999999999888999999999998653 3457999999999999988654 48999999999
Q ss_pred HHHHHHHHhh---CccccccEEEecccCCCCchhhhH--------hhhhcc--chhhhhhc----ccccHHHHHHHHHhh
Q 024228 123 GMVGFKMAEM---YPDLVESMVVTCSVMGLTESVSNA--------ALERIG--YESWVDFL----LPKTADALKVQFDIA 185 (270)
Q Consensus 123 g~~a~~~a~~---~p~~v~~~i~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~ 185 (270)
|.+|..+|.+ .++++..++++++........... ...... ........ .......+...+...
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1223 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGNYADA 1223 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHHHHHH
Confidence 9999999986 467899999988643211000000 000000 00000000 000001111111110
Q ss_pred hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 186 CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 186 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
.. .........+.+|++++.++.|...+......+.+.. ++.+...++ ++|+.+...+
T Consensus 1224 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~-g~H~~~~~~~ 1281 (1296)
T PRK10252 1224 VR---LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQD-CAHVDIISPE 1281 (1296)
T ss_pred HH---HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECC-CCHHHHCCcH
Confidence 00 0000011223388999999988765544444555555 478888886 5999977444
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.8e-13 Score=99.93 Aligned_cols=210 Identities=16% Similarity=0.101 Sum_probs=80.0
Q ss_pred CCceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCC----CCCCCCCCCCCCChHHHHHHHHHHHHHh-------
Q 024228 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFL----FFGSSVTDRPDRTASFQAECMAKGLRKL------- 109 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~l~~~------- 109 (270)
....|||+.|.+.... .+...+++.|.+. |.++-+-++ |+|. .+++.-++||.++++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~-------~SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT-------SSLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc-------chhhhHHHHHHHHHHHHHHhhccc
Confidence 4668999999886544 4677888999765 999998865 3443 45777777777776654
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCc-----cccccEEEecccCCCCchhh--------hHhhh---hccchhhhhhccc
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYP-----DLVESMVVTCSVMGLTESVS--------NAALE---RIGYESWVDFLLP 172 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~i~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~ 172 (270)
+.++|+|+|||.|+.-++.|+.... ..|+++|+-+|+.+...... ..... .+..........+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 3468999999999999999988752 56999999999876432111 11000 0000000000000
Q ss_pred ---------ccHHHHHHHHHhhhhc----------CCCChhhhhhhhheeeeEEEcCCCccCCHHHH-HHHHHHhc----
Q 024228 173 ---------KTADALKVQFDIACYK----------LPTLPAFVYKHILEKIHLLWGENDKIFDMQVA-RNLKEQVG---- 228 (270)
Q Consensus 173 ---------~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~---- 228 (270)
...-....+++..... ....-...+..+..|+|++.+++|..||...- +.+.+++.
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~ 264 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATN 264 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccc
Confidence 1111111222111100 00111223344448999999999999986432 23333322
Q ss_pred C---CceEEEecCCCcceeecch----HhHHHHHHHHHH
Q 024228 229 Q---NATMESIEKAGHLVNLERP----FVYNRQLKTILA 260 (270)
Q Consensus 229 ~---~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 260 (270)
+ ...--++|||+|.+-.+.. +.+.+.+..||+
T Consensus 265 ~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 265 PKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccCC
Confidence 1 1224589999999865332 357777788774
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.7e-12 Score=99.23 Aligned_cols=218 Identities=18% Similarity=0.102 Sum_probs=117.7
Q ss_pred eEEEEEec--CCCCCCceEEEeCCCCCccc--ccHHHHHHHh-hcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024228 32 TILNIWVP--KKTTKKHAVVLLHPFGFDGI--LTWQFQVLAL-AKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105 (270)
Q Consensus 32 ~~l~~~~~--~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l-~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 105 (270)
..+..+.+ ....+.|+||++||++.... .....++..+ ... +.|+++|||-..+.. .....++..+.+..+
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l 140 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWL 140 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC---CCchHHHHHHHHHHH
Confidence 45555665 33345799999999875433 1333444444 334 999999999543332 112333333333333
Q ss_pred HHH---h--CCCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHH
Q 024228 106 LRK---L--GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTAD 176 (270)
Q Consensus 106 l~~---~--~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
.++ + +.+++.+.|+|.||.+++.++....+ ...+.+++.|...... ..... ...... ..+......
T Consensus 141 ~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~-~~~~~~---~~~~~~~~~ 215 (312)
T COG0657 141 RANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL-PGYGEA---DLLDAAAIL 215 (312)
T ss_pred HhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch-hhcCCc---cccCHHHHH
Confidence 333 2 35689999999999999998877543 4788899998876554 11110 000000 000000000
Q ss_pred -HHHHHHHhhh-hc----CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecc
Q 024228 177 -ALKVQFDIAC-YK----LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLER 247 (270)
Q Consensus 177 -~~~~~~~~~~-~~----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~ 247 (270)
.+...+.... .. ........+.. ..|+++++|+.|.+.+ ....+.+++. ..++++.+++..|.+..-.
T Consensus 216 ~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~ 292 (312)
T COG0657 216 AWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLT 292 (312)
T ss_pred HHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccC
Confidence 0111110000 00 00011111233 4899999999999987 4445555443 2578999999999764433
Q ss_pred -hH--hHHHHHHHHHH
Q 024228 248 -PF--VYNRQLKTILA 260 (270)
Q Consensus 248 -~~--~~~~~i~~fl~ 260 (270)
++ .....+.+|+.
T Consensus 293 ~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 293 GPEARSALRQIAAFLR 308 (312)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 22 22344555554
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.5e-11 Score=93.79 Aligned_cols=119 Identities=19% Similarity=0.233 Sum_probs=79.0
Q ss_pred CCeEEEE--Eec--CCCCCCceEEEeCCCCCcccccHHHH---H------HHhhcc-ceEEeecCCCCCCCCCCCCCCCh
Q 024228 30 PGTILNI--WVP--KKTTKKHAVVLLHPFGFDGILTWQFQ---V------LALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 30 ~g~~l~~--~~~--~~~~~~~~vv~~hG~~~~~~~~~~~~---~------~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
||.+|.. +.+ ....+.|+||..|+++.......... . ..+.++ |.|+..|.||.|.|+...... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-S 79 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-S
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-C
Confidence 6777764 556 34456689999999986542011111 1 126666 999999999999999765443 4
Q ss_pred HHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 96 SFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
....+|..++|+.+. ..+|.++|.|++|..++.+|+..|..+++++...+..+.
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 445666666666552 248999999999999999999888899999998776554
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.2e-12 Score=106.94 Aligned_cols=197 Identities=12% Similarity=0.057 Sum_probs=117.7
Q ss_pred HHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--------------------CCceEEEEEchhH
Q 024228 65 QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--------------------VEKCTLVGVSYGG 123 (270)
Q Consensus 65 ~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~--------------------~~~~~l~G~S~Gg 123 (270)
+.+.+.++ |.|+..|.||+|.|++...... ....+|..++|+.+. ..+|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 34667777 9999999999999998653332 233556666665553 3689999999999
Q ss_pred HHHHHHHhhCccccccEEEecccCCCCchhhhHh-hh-hccc-----hhhhhh-----ccc----ccHHHHHHHHH---h
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-LE-RIGY-----ESWVDF-----LLP----KTADALKVQFD---I 184 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~~-----~~~----~~~~~~~~~~~---~ 184 (270)
.+++.+|...|+.++++|..++............ .. ..++ ...... ... ........... .
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 429 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTA 429 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhh
Confidence 9999999998888999999887654321110000 00 0000 000000 000 00011111100 0
Q ss_pred -h-----hhcCCC---ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cchHhH
Q 024228 185 -A-----CYKLPT---LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVY 251 (270)
Q Consensus 185 -~-----~~~~~~---~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~ 251 (270)
. .+...| .......++.+|+|+++|..|..++++.+.++++.+. ...++.+.+ .+|.... ..+..+
T Consensus 430 ~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d~ 508 (767)
T PRK05371 430 AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSIDF 508 (767)
T ss_pred hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHHH
Confidence 0 000011 1123345566999999999999999888878777764 245666665 4786543 344567
Q ss_pred HHHHHHHHHhhh
Q 024228 252 NRQLKTILASLV 263 (270)
Q Consensus 252 ~~~i~~fl~~~~ 263 (270)
.+.+.+|+....
T Consensus 509 ~e~~~~Wfd~~L 520 (767)
T PRK05371 509 RDTMNAWFTHKL 520 (767)
T ss_pred HHHHHHHHHhcc
Confidence 777888886654
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.4e-12 Score=92.85 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=118.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhh-cc---ceEEee--cCCCC----CCCC---CCC--------CC-CChHHHHHH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALA-KT---YEVYVP--DFLFF----GSSV---TDR--------PD-RTASFQAEC 101 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~---~~v~~~--d~~g~----G~s~---~~~--------~~-~~~~~~~~~ 101 (270)
...|.||+||++++.. .+..++..+. +. -.++.+ +--|+ |.-. ..+ .. .+....+..
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 4578999999999999 9999999997 43 334333 33332 2211 111 11 245666777
Q ss_pred HHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhccc
Q 024228 102 MAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (270)
Q Consensus 102 ~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (270)
+..++..| +.+++-+|||||||..++.++..+.. ++.++|.++++............ .......-..
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~----~~~~~~~gp~ 164 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN----QNDLNKNGPK 164 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT----TT-CSTT-BS
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch----hhhhcccCCc
Confidence 77777765 67899999999999999999887532 58999999987654321111000 0000000001
Q ss_pred ccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcC------CCccCCHHHHHHHHHHhcC---CceEEEecC--CCc
Q 024228 173 KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGE------NDKIFDMQVARNLKEQVGQ---NATMESIEK--AGH 241 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~---~~~~~~~~~--~gH 241 (270)
.....+..+..... ...+.. +.+|-|.|. .|..||...+..+...+.+ ..+-.++.| +.|
T Consensus 165 ~~~~~y~~l~~~~~---~~~p~~------i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~H 235 (255)
T PF06028_consen 165 SMTPMYQDLLKNRR---KNFPKN------IQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQH 235 (255)
T ss_dssp S--HHHHHHHHTHG---GGSTTT-------EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSC
T ss_pred ccCHHHHHHHHHHH---hhCCCC------eEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCcc
Confidence 11223333333310 011111 679999998 8999999999888887752 244555654 688
Q ss_pred ceeecchHhHHHHHHHHH
Q 024228 242 LVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl 259 (270)
.-..++++ +.+.|.+||
T Consensus 236 S~LheN~~-V~~~I~~FL 252 (255)
T PF06028_consen 236 SQLHENPQ-VDKLIIQFL 252 (255)
T ss_dssp CGGGCCHH-HHHHHHHHH
T ss_pred ccCCCCHH-HHHHHHHHh
Confidence 88777765 779999998
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.1e-11 Score=84.42 Aligned_cols=224 Identities=14% Similarity=0.095 Sum_probs=136.3
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc----ceEEeecCCCCCCCC---CC------CCCCChHHHHH
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT----YEVYVPDFLFFGSSV---TD------RPDRTASFQAE 100 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~g~G~s~---~~------~~~~~~~~~~~ 100 (270)
+.+|.......++.+++++|.+|... .|..++..|-+. ..++.+-.-||-.-+ .. ...++.++.++
T Consensus 18 ~~~~v~~~~~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~ 96 (301)
T KOG3975|consen 18 LKPWVTKSGEDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVD 96 (301)
T ss_pred eeeeeccCCCCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHH
Confidence 34455444467889999999999999 999998877655 458888888876543 11 12367777788
Q ss_pred HHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCc--cccccEEEecccCCC-Cchhh----hHhhh----hccchhhh
Q 024228 101 CMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYP--DLVESMVVTCSVMGL-TESVS----NAALE----RIGYESWV 167 (270)
Q Consensus 101 ~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~~-~~~~~----~~~~~----~~~~~~~~ 167 (270)
--.++++..- ..+++++|||-|+++.+++..... -.|.+++++-|.... ..+.. ..... ........
T Consensus 97 HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi 176 (301)
T KOG3975|consen 97 HKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYI 176 (301)
T ss_pred HHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeee
Confidence 7788887763 348999999999999999887432 247777776554311 10000 00000 00000000
Q ss_pred -hhccc---------------ccHHHHH---------HHHHhhhhcC-------CCChhhhhhhhheeeeEEEcCCCccC
Q 024228 168 -DFLLP---------------KTADALK---------VQFDIACYKL-------PTLPAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 168 -~~~~~---------------~~~~~~~---------~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
..+.+ .....+. .......+.. .....+.+++-.+-+.+.+|..|.+|
T Consensus 177 ~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~ 256 (301)
T KOG3975|consen 177 YWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWV 256 (301)
T ss_pred eeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCc
Confidence 00000 0000000 0000000000 00112223333378999999999999
Q ss_pred CHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 216 DMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
|.+....+.+.++ .+.++-+ ++..|.+...+.+..+..+.+.+
T Consensus 257 p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 257 PSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred chHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 9999999999998 4556655 77899999988888888877765
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-11 Score=98.09 Aligned_cols=125 Identities=16% Similarity=0.067 Sum_probs=87.1
Q ss_pred eEEEeecC---CeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHH------------------HhhccceEEee
Q 024228 23 QRTIEIEP---GTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL------------------ALAKTYEVYVP 78 (270)
Q Consensus 23 ~~~i~~~~---g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~------------------~l~~~~~v~~~ 78 (270)
.-++.+.+ +..++||...+ +.+.|.||+++|++|++. .+..+.+ .+.+..+++.+
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~i 127 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYV 127 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccccCeEEE
Confidence 45566643 56787765543 346799999999999886 5432210 12334789999
Q ss_pred cCC-CCCCCCCCCCC--CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhC----------ccccc
Q 024228 79 DFL-FFGSSVTDRPD--RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY----------PDLVE 138 (270)
Q Consensus 79 d~~-g~G~s~~~~~~--~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~ 138 (270)
|.| |+|.|...... .+.++.++|+.++++.+ ...+++|+|||+||.++..+|.+. .-.++
T Consensus 128 DqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLk 207 (462)
T PTZ00472 128 DQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLA 207 (462)
T ss_pred eCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeE
Confidence 975 88888754332 45577888888888753 447899999999999988877652 11478
Q ss_pred cEEEecccCC
Q 024228 139 SMVVTCSVMG 148 (270)
Q Consensus 139 ~~i~~~~~~~ 148 (270)
++++-++...
T Consensus 208 Gi~IGNg~~d 217 (462)
T PTZ00472 208 GLAVGNGLTD 217 (462)
T ss_pred EEEEeccccC
Confidence 8888887654
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.7e-12 Score=88.66 Aligned_cols=181 Identities=16% Similarity=0.153 Sum_probs=122.6
Q ss_pred EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCC-CCCCCCC-CC-------CCCChHHHHHHHHHHH
Q 024228 37 WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFL-FFGSSVT-DR-------PDRTASFQAECMAKGL 106 (270)
Q Consensus 37 ~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~-g~G~s~~-~~-------~~~~~~~~~~~~~~~l 106 (270)
|..++..++..||++--+.+.....-+..+..++.+ |.|+.+|+- |--.+.. .. ...+....-.++..++
T Consensus 31 Yv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~ 110 (242)
T KOG3043|consen 31 YVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVV 110 (242)
T ss_pred EEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHH
Confidence 344554455677777776666553466778888888 999999974 3111211 00 1123333345566665
Q ss_pred HHh---C-CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHH
Q 024228 107 RKL---G-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQF 182 (270)
Q Consensus 107 ~~~---~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (270)
+.+ + ..++.++|.||||-++..+....| .+.+.+.+-|.....
T Consensus 111 k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~-------------------------------- 157 (242)
T KOG3043|consen 111 KWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS-------------------------------- 157 (242)
T ss_pred HHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh--------------------------------
Confidence 554 3 568999999999999998888877 588877776544311
Q ss_pred HhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC----ceEEEecCCCcceee-----cch-----
Q 024228 183 DIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN----ATMESIEKAGHLVNL-----ERP----- 248 (270)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-----~~~----- 248 (270)
.......+|++++.|+.|.++|++....+.+.+..+ .++.+++|.+|-++. +.|
T Consensus 158 ------------~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~ 225 (242)
T KOG3043|consen 158 ------------ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKA 225 (242)
T ss_pred ------------hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHH
Confidence 112223389999999999999999999998888733 369999999999873 233
Q ss_pred -HhHHHHHHHHHHhh
Q 024228 249 -FVYNRQLKTILASL 262 (270)
Q Consensus 249 -~~~~~~i~~fl~~~ 262 (270)
++..+.+.+|++..
T Consensus 226 ~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 226 AEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHHh
Confidence 34556677777654
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-11 Score=102.83 Aligned_cols=231 Identities=18% Similarity=0.118 Sum_probs=144.7
Q ss_pred cccCCceeEEEeecCCeEEEEEecCC-----CCCCceEEEeCCCCCccc--ccH-HHHHHH-hhcc-ceEEeecCCCCCC
Q 024228 16 LKLVGMTQRTIEIEPGTILNIWVPKK-----TTKKHAVVLLHPFGFDGI--LTW-QFQVLA-LAKT-YEVYVPDFLFFGS 85 (270)
Q Consensus 16 ~~~~~~~~~~i~~~~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~--~~~-~~~~~~-l~~~-~~v~~~d~~g~G~ 85 (270)
...+.++...+.. +|....+....+ .+.-|.+|.+||++++.. ..| ..+... +... +.|+.+|.||.|.
T Consensus 493 ~~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~ 571 (755)
T KOG2100|consen 493 VALPIVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGG 571 (755)
T ss_pred ccCCcceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCC
Confidence 4455667777777 788887754433 234578888999987332 011 112233 3444 9999999999876
Q ss_pred CCCCC--------CCCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccc-cccEEEecccCCCCchhh
Q 024228 86 SVTDR--------PDRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDL-VESMVVTCSVMGLTESVS 154 (270)
Q Consensus 86 s~~~~--------~~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~i~~~~~~~~~~~~~ 154 (270)
..... +....++....+..+++. ++.+++.++|+|.||++++.++...|++ +++.+.++|+.... ...
T Consensus 572 ~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yd 650 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYD 650 (755)
T ss_pred cchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eec
Confidence 65432 223444555555555554 3556899999999999999999999854 55559999987654 111
Q ss_pred hHhhhh-ccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee-eeEEEcCCCccCCHHHHHHHHHHhc---C
Q 024228 155 NAALER-IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK-IHLLWGENDKIFDMQVARNLKEQVG---Q 229 (270)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~---~ 229 (270)
.....+ ++. +...... +.. .........+..| .|++||+.|..|+.+.+..+.+.+. -
T Consensus 651 s~~terymg~--------p~~~~~~---y~e------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv 713 (755)
T KOG2100|consen 651 STYTERYMGL--------PSENDKG---YEE------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV 713 (755)
T ss_pred ccccHhhcCC--------Cccccch---hhh------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC
Confidence 111111 110 0000000 000 0011112222244 4999999999999998888887775 2
Q ss_pred CceEEEecCCCcceeecc-hHhHHHHHHHHHHhhhhh
Q 024228 230 NATMESIEKAGHLVNLER-PFVYNRQLKTILASLVHA 265 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~~~~ 265 (270)
..++.++|+.+|.+.... -..+...+..|+..+...
T Consensus 714 ~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 714 PFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred ceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 378999999999997644 356788999999866544
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.9e-12 Score=92.55 Aligned_cols=162 Identities=17% Similarity=0.109 Sum_probs=86.1
Q ss_pred CCceEEEeCCCCCcccccHHHH----HHHhhc-cceEEeecCCCC-----CCCCC------------CC-------C---
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQ----VLALAK-TYEVYVPDFLFF-----GSSVT------------DR-------P--- 91 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~----~~~l~~-~~~v~~~d~~g~-----G~s~~------------~~-------~--- 91 (270)
.++-||++||++.++. .++.. ...|.+ .+.++.+|-|-- |-... +. .
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 4788999999999998 77654 456666 588888885521 11100 00 0
Q ss_pred -CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC--------ccccccEEEecccCCCCchhhhHhhhhcc
Q 024228 92 -DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY--------PDLVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 92 -~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
...+++..+.+.++++..+. =..|+|+|.||.+|..++... ...++-+|++++........
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~--------- 151 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY--------- 151 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G---------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh---------
Confidence 12234445555555555442 367999999999998888642 12478888888766532210
Q ss_pred chhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC-ceEEEecCCCc
Q 024228 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN-ATMESIEKAGH 241 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH 241 (270)
.... ....+.+|+|.|+|++|.+++++.++.+.+.+. + .+++..++ ||
T Consensus 152 -------------------------~~~~----~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~-~~~~v~~h~g-GH 200 (212)
T PF03959_consen 152 -------------------------QELY----DEPKISIPTLHVIGENDPVVPPERSEALAEMFD-PDARVIEHDG-GH 200 (212)
T ss_dssp -------------------------TTTT------TT---EEEEEEETT-SSS-HHHHHHHHHHHH-HHEEEEEESS-SS
T ss_pred -------------------------hhhh----ccccCCCCeEEEEeCCCCCcchHHHHHHHHhcc-CCcEEEEECC-CC
Confidence 0000 011223999999999999999999999999987 5 78888875 88
Q ss_pred ceeecc
Q 024228 242 LVNLER 247 (270)
Q Consensus 242 ~~~~~~ 247 (270)
.+....
T Consensus 201 ~vP~~~ 206 (212)
T PF03959_consen 201 HVPRKK 206 (212)
T ss_dssp S----H
T ss_pred cCcCCh
Confidence 886543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.42 E-value=3e-11 Score=87.57 Aligned_cols=167 Identities=21% Similarity=0.153 Sum_probs=94.0
Q ss_pred CCceEEEeCCCCCcccccHHHH--HHHhhcc--ceEEeecCCCCCCCCC---------CCCCCChHHHHHHHHHHHHHh-
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQ--VLALAKT--YEVYVPDFLFFGSSVT---------DRPDRTASFQAECMAKGLRKL- 109 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~--~~~l~~~--~~v~~~d~~g~G~s~~---------~~~~~~~~~~~~~~~~~l~~~- 109 (270)
+.|.||++||.+.+.. .+... ...++++ |.|+.++......... .....+...+...+..+.++.
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 4689999999999887 55432 3456666 7888887542111000 001112222233333344443
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhc
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYK 188 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
+..+|++.|+|.||.++..++..+|+.+.++..+++...............+. .... ........... .
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~-----~g~~-~~p~~~~~a~~----~ 163 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMR-----SGPR-PAPAAAWGARS----D 163 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhh-----CCCC-CChHHHHHhhh----h
Confidence 45689999999999999999999999999988887664322111000000000 0000 00000000000 0
Q ss_pred CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 189 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
....+ ..|++++||+.|..|.+...+++.+.+.
T Consensus 164 ~g~~~-------~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 164 AGAYP-------GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred ccCCC-------CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 00011 1589999999999999887777766543
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-12 Score=88.63 Aligned_cols=201 Identities=13% Similarity=0.127 Sum_probs=117.5
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCC---cccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGF---DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
.+...+....|..-.+-.+++....+.+||+||+-- +...+....-..+...|+|..+++- .++ ...++++
T Consensus 43 ~r~e~l~Yg~~g~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~---q~htL~q 116 (270)
T KOG4627|consen 43 IRVEHLRYGEGGRQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCP---QVHTLEQ 116 (270)
T ss_pred cchhccccCCCCceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCc---ccccHHH
Confidence 334444443232223333444457899999999542 2221222223444444999988753 333 2234555
Q ss_pred HHHHHHH----HHHHhC-CCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcc
Q 024228 98 QAECMAK----GLRKLG-VEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLL 171 (270)
Q Consensus 98 ~~~~~~~----~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (270)
...++.. +++... .+.+.+-|||.|+.+|..+..+. ..+|.+++++++...............++....
T Consensus 117 t~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~----- 191 (270)
T KOG4627|consen 117 TMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTER----- 191 (270)
T ss_pred HHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccc-----
Confidence 4444444 344443 34677889999999999887764 348999999988765432211111111111000
Q ss_pred cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 172 PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
.. +. ....-..+.....|+|++.+++|.---.++.+.+...+. .+++..+++.+|+-.+++
T Consensus 192 --~a----e~--------~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 192 --NA----ES--------VSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-KASFTLFKNYDHYDIIEE 252 (270)
T ss_pred --hh----hh--------cCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-hcceeecCCcchhhHHHH
Confidence 00 00 001112234444899999999997655678888888887 799999999999987754
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.6e-11 Score=87.93 Aligned_cols=100 Identities=21% Similarity=0.250 Sum_probs=86.1
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEchhHH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGGM 124 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg~ 124 (270)
|+++++|+.+|... .|..+...|.....|+.++.||.+.. .....+++++++...+.|.... ..++.|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 58999999999998 99999999999999999999999862 3344789999998888888775 45999999999999
Q ss_pred HHHHHHhhC---ccccccEEEecccCC
Q 024228 125 VGFKMAEMY---PDLVESMVVTCSVMG 148 (270)
Q Consensus 125 ~a~~~a~~~---p~~v~~~i~~~~~~~ 148 (270)
+|..+|.+. .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999864 346999999998877
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=1e-12 Score=100.65 Aligned_cols=129 Identities=25% Similarity=0.251 Sum_probs=70.6
Q ss_pred CCceeEEE--eecCCeEEE--EEecCC-CCCCceEEEeCCCCCcccc---c----------H----HHHHHHhhcc-ceE
Q 024228 19 VGMTQRTI--EIEPGTILN--IWVPKK-TTKKHAVVLLHPFGFDGIL---T----------W----QFQVLALAKT-YEV 75 (270)
Q Consensus 19 ~~~~~~~i--~~~~g~~l~--~~~~~~-~~~~~~vv~~hG~~~~~~~---~----------~----~~~~~~l~~~-~~v 75 (270)
.+.+.+++ .+.++..+. +.++.+ .++-|+||++||-++..+. . + ..+...|+++ |-|
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVv 163 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVV 163 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEE
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEE
Confidence 34444443 344666554 345555 4567899999997765430 0 1 1246778888 999
Q ss_pred EeecCCCCCCCCCCCCC-----CChHHH---------------HHHHHHHHHHh------CCCceEEEEEchhHHHHHHH
Q 024228 76 YVPDFLFFGSSVTDRPD-----RTASFQ---------------AECMAKGLRKL------GVEKCTLVGVSYGGMVGFKM 129 (270)
Q Consensus 76 ~~~d~~g~G~s~~~~~~-----~~~~~~---------------~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~ 129 (270)
+++|.+|+|+....... .+...+ +-|....++.+ +.++|.++|+||||..++.+
T Consensus 164 la~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L 243 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL 243 (390)
T ss_dssp EEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH
Confidence 99999999987654321 121222 12223344444 34689999999999999999
Q ss_pred HhhCccccccEEEecccCC
Q 024228 130 AEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 130 a~~~p~~v~~~i~~~~~~~ 148 (270)
|+.. ++|++.|..+....
T Consensus 244 aALD-dRIka~v~~~~l~~ 261 (390)
T PF12715_consen 244 AALD-DRIKATVANGYLCT 261 (390)
T ss_dssp HHH--TT--EEEEES-B--
T ss_pred HHcc-hhhHhHhhhhhhhc
Confidence 9987 47998888765543
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.6e-11 Score=83.07 Aligned_cols=176 Identities=19% Similarity=0.206 Sum_probs=111.4
Q ss_pred CCceEEEeCCCCCcccccHHH----HHHHhhccceEEeecCCCC----CCCCCCC-------------------------
Q 024228 44 KKHAVVLLHPFGFDGILTWQF----QVLALAKTYEVYVPDFLFF----GSSVTDR------------------------- 90 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~~~v~~~d~~g~----G~s~~~~------------------------- 90 (270)
.++-|||+||+-.+.. .|.. +...+.+.+.++.+|-|-- +.+....
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 4678999999999888 6654 3344555588888887620 1110000
Q ss_pred -CCCChHHHHHHHHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCc------c--ccccEEEecccCCCCchhhhHhhhh
Q 024228 91 -PDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYP------D--LVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 91 -~~~~~~~~~~~~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p------~--~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
.....+...+-+.+.+.+.| ++ .|+|+|.|+.++..++.... . .++-+|++++.........
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~------ 154 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLD------ 154 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhh------
Confidence 00122333444555555543 54 69999999999988887211 1 2567777776544221000
Q ss_pred ccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC
Q 024228 161 IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240 (270)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (270)
.......+.+|.|.|.|+.|.++|...+..+++.+. +..+...+| |
T Consensus 155 --------------------------------~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-~a~vl~Hpg-g 200 (230)
T KOG2551|consen 155 --------------------------------ESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFK-DATVLEHPG-G 200 (230)
T ss_pred --------------------------------hhhhccCCCCCeeEEecccceeecchHHHHHHHhcC-CCeEEecCC-C
Confidence 000122333999999999999999999999999998 777777774 9
Q ss_pred cceeecchHhHHHHHHHHHHhhhh
Q 024228 241 HLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
|...... .+.+.|.+|++....
T Consensus 201 H~VP~~~--~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 201 HIVPNKA--KYKEKIADFIQSFLQ 222 (230)
T ss_pred ccCCCch--HHHHHHHHHHHHHHH
Confidence 9987544 455666666665544
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-11 Score=88.26 Aligned_cols=179 Identities=17% Similarity=0.225 Sum_probs=111.4
Q ss_pred EEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC---CChHHHHHHHHHHHHH
Q 024228 33 ILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD---RTASFQAECMAKGLRK 108 (270)
Q Consensus 33 ~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~l~~ 108 (270)
.+-...+...+.-|.|+|+||+..... .|..+..+++.+ |-|+++++-..-. +... .+....++++..-+.+
T Consensus 34 pLlI~tP~~~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~ 109 (307)
T PF07224_consen 34 PLLIVTPSEAGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQH 109 (307)
T ss_pred CeEEecCCcCCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhh
Confidence 455555655566799999999998888 999999999999 9999999864211 1111 1222233333333333
Q ss_pred h-------CCCceEEEEEchhHHHHHHHHhhCc--cccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHH
Q 024228 109 L-------GVEKCTLVGVSYGGMVGFKMAEMYP--DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALK 179 (270)
Q Consensus 109 ~-------~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (270)
+ +..++.++|||.||-.|..+|..+. -.++++|-++|.......... .+...
T Consensus 110 ~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t---------------~P~iL---- 170 (307)
T PF07224_consen 110 VLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQT---------------PPPIL---- 170 (307)
T ss_pred hCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCC---------------CCCee----
Confidence 2 3458999999999999999988763 258899999988654321100 00000
Q ss_pred HHHHhhhhcCCCChhhhhhhhheeeeEEEcCCC----ccCC---HH--HHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 180 VQFDIACYKLPTLPAFVYKHILEKIHLLWGEND----KIFD---MQ--VARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D----~~~~---~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
.+. +. .-++.+|+++|-+.-- ...| +. .-+++++..++.+-..+..+.||+.+++
T Consensus 171 ------ty~----p~--SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hfV~~dYGHmDmLD 234 (307)
T PF07224_consen 171 ------TYV----PQ--SFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHFVAKDYGHMDMLD 234 (307)
T ss_pred ------ecC----Cc--ccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccceeeeecccccccccc
Confidence 000 00 0122278988865443 1211 22 3456777766566666777889999874
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.35 E-value=1e-11 Score=90.74 Aligned_cols=164 Identities=18% Similarity=0.209 Sum_probs=79.3
Q ss_pred HHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh-----hhhccchhhhh-h
Q 024228 99 AECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-----LERIGYESWVD-F 169 (270)
Q Consensus 99 ~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~ 169 (270)
.+...+++... +.++|.|+|.|.||-+|+.+|..+| .|+++|.++|............ ........... .
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 84 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSW 84 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhcee
Confidence 34444455443 3368999999999999999999999 6999999988754322111000 00000000000 0
Q ss_pred cccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHHHHHhc-----CCceEEEecCCCcce
Q 024228 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNLKEQVG-----QNATMESIEKAGHLV 243 (270)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~gH~~ 243 (270)
.......... ..............--+.++.+|+|+|.|++|...|... ++.+.+++. .+.+++.++++||.+
T Consensus 85 ~~~~~~~~~~-~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 85 NEPGLLRSRY-AFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -TTS-EE-TT--B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred cCCcceehhh-hhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 0000000000 000000000000111245556999999999999998654 445555554 146888899999996
Q ss_pred eec----------------------------chHhHHHHHHHHHHhhhh
Q 024228 244 NLE----------------------------RPFVYNRQLKTILASLVH 264 (270)
Q Consensus 244 ~~~----------------------------~~~~~~~~i~~fl~~~~~ 264 (270)
... ..++.+..+.+||+++..
T Consensus 164 ~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 164 EPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp -STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 310 123467788899987754
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.6e-11 Score=95.34 Aligned_cols=223 Identities=15% Similarity=0.104 Sum_probs=137.8
Q ss_pred EEEeecCCeEEEEEecCCC-----CCCceEEEeCCCCCccc--ccH--HHH--HHHhhcc-ceEEeecCCCCCCCCCC--
Q 024228 24 RTIEIEPGTILNIWVPKKT-----TKKHAVVLLHPFGFDGI--LTW--QFQ--VLALAKT-YEVYVPDFLFFGSSVTD-- 89 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~--~~~--~~~--~~~l~~~-~~v~~~d~~g~G~s~~~-- 89 (270)
..++...|..++-....+. ++-|+++++-|+++-.- ..| ... ...|+.. |.|+++|-||.-.....
T Consensus 616 f~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE 695 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFE 695 (867)
T ss_pred eeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhH
Confidence 4446656777764333321 34689999999886433 112 111 2456666 99999999987554322
Q ss_pred ------CCCCChHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh
Q 024228 90 ------RPDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 90 ------~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
.+....++.++-+.-+.++. +.+++.+-|+|+||++++....++|+-++..|.-+|...+.........+.
T Consensus 696 ~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERY 775 (867)
T KOG2281|consen 696 SHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERY 775 (867)
T ss_pred HHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhh
Confidence 13356677777777777776 467999999999999999999999997787777666654322111111112
Q ss_pred ccchhhhh-hcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEe
Q 024228 161 IGYESWVD-FLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESI 236 (270)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~ 236 (270)
++...... .... ......... .+++ ....|++||--|.-|.......+.+.+- +..+++++
T Consensus 776 Mg~P~~nE~gY~a---gSV~~~Vek-------lpde-----pnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~If 840 (867)
T KOG2281|consen 776 MGYPDNNEHGYGA---GSVAGHVEK-------LPDE-----PNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIF 840 (867)
T ss_pred cCCCccchhcccc---hhHHHHHhh-------CCCC-----CceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEc
Confidence 22111000 0000 000000000 0100 0358999999999998877777666543 46799999
Q ss_pred cCCCcceee-cchHhHHHHHHHHHHh
Q 024228 237 EKAGHLVNL-ERPFVYNRQLKTILAS 261 (270)
Q Consensus 237 ~~~gH~~~~-~~~~~~~~~i~~fl~~ 261 (270)
|+-.|.+-. +...-+...+..|+++
T Consensus 841 P~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 841 PNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred cccccccCCCccchhHHHHHHHHHhh
Confidence 999999865 4445566778888865
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.1e-11 Score=88.71 Aligned_cols=106 Identities=21% Similarity=0.176 Sum_probs=71.7
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhh--------c-cceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHh----
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALA--------K-TYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKL---- 109 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~--------~-~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~---- 109 (270)
.+.+|||+||.+++.. .++.+...+. . .++++++|+......-... -....+...+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4789999999999888 8887765552 1 2788999987542111110 0112233344455555555
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCc---cccccEEEecccCCCC
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMGLT 150 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~ 150 (270)
+.++++|+||||||.+|..++...+ +.|+.+|.++++...+
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 4568999999999999988876543 4799999998876544
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.6e-11 Score=83.54 Aligned_cols=178 Identities=17% Similarity=0.103 Sum_probs=111.7
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEEc
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGVS 120 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S 120 (270)
..+|++.|=++-.. .=..++..|+++ +.|+.+|-+-+-.+ ..++++.+.|+.+++++. +.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~-----~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWS-----ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhh-----hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 45677777555444 445678999988 99999997644333 357788888888887765 67899999999
Q ss_pred hhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhh
Q 024228 121 YGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFV 196 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (270)
+|+-+.-....+.|. +|+.++++++.....-..... .++..............
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~-----------------------~wlg~~~~~~~~~~~pe 133 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVS-----------------------GWLGMGGDDAAYPVIPE 133 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhh-----------------------hhcCCCCCcccCCchHH
Confidence 999888877777764 789999998765432111100 00000000000011111
Q ss_pred hhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 197 YKHIL-EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 197 ~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
++++. .|++.|+|+++.-.. +..+. . ++.+.+.+|| ||.+- ++.+.+++.|.+-++
T Consensus 134 i~~l~~~~v~CiyG~~E~d~~---cp~l~--~-~~~~~i~lpG-gHHfd-~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 134 IAKLPPAPVQCIYGEDEDDSL---CPSLR--Q-PGVEVIALPG-GHHFD-GDYDALAKRILDALK 190 (192)
T ss_pred HHhCCCCeEEEEEcCCCCCCc---Ccccc--C-CCcEEEEcCC-CcCCC-CCHHHHHHHHHHHHh
Confidence 22222 689999998775421 11111 1 3789999997 67663 556667777776665
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.4e-11 Score=94.53 Aligned_cols=157 Identities=16% Similarity=0.131 Sum_probs=82.5
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCC-----CC-----C-------C------CCC-ChH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSS-----VT-----D-------R------PDR-TAS 96 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s-----~~-----~-------~------~~~-~~~ 96 (270)
..-|+|||.||++++.. .|..++..|+.+ |-|+++|+|.. +-. +. . . ... ..+
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 34699999999999999 999999999999 99999999942 110 00 0 0 000 000
Q ss_pred ----------HHHHHHHHHHHHh--------------------------CCCceEEEEEchhHHHHHHHHhhCccccccE
Q 024228 97 ----------FQAECMAKGLRKL--------------------------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140 (270)
Q Consensus 97 ----------~~~~~~~~~l~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 140 (270)
.-+.++..+++.+ +.++++++|||+||..++.++.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 1123333333222 134689999999999999888876 579999
Q ss_pred EEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHH
Q 024228 141 VVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 141 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
|+++++..+-.. .....+..|+|+|.++. +...+..
T Consensus 256 I~LD~W~~Pl~~------------------------------------------~~~~~i~~P~L~InSe~--f~~~~~~ 291 (379)
T PF03403_consen 256 ILLDPWMFPLGD------------------------------------------EIYSKIPQPLLFINSES--FQWWENI 291 (379)
T ss_dssp EEES---TTS-G------------------------------------------GGGGG--S-EEEEEETT--T--HHHH
T ss_pred EEeCCcccCCCc------------------------------------------ccccCCCCCEEEEECcc--cCChhhH
Confidence 999987542110 00112227999998875 2233333
Q ss_pred HHHHHHhc--CCceEEEecCCCcceee
Q 024228 221 RNLKEQVG--QNATMESIEKAGHLVNL 245 (270)
Q Consensus 221 ~~~~~~~~--~~~~~~~~~~~gH~~~~ 245 (270)
..+.+... ....+..+.|+.|..+-
T Consensus 292 ~~~~~~~~~~~~~~~~ti~gt~H~s~s 318 (379)
T PF03403_consen 292 FRMKKVISNNKESRMLTIKGTAHLSFS 318 (379)
T ss_dssp HHHHTT--TTS-EEEEEETT--GGGGS
T ss_pred HHHHHHhccCCCcEEEEECCCcCCCcc
Confidence 33333221 36788999999998643
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.1e-11 Score=82.35 Aligned_cols=174 Identities=16% Similarity=0.189 Sum_probs=113.0
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCC--------C----------CCCCCChHHHHHHHHHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV--------T----------DRPDRTASFQAECMAKG 105 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~--------~----------~~~~~~~~~~~~~~~~~ 105 (270)
..+||++||.+.+.. .|..+++.|.-. ...+++.-|-.-.+. . ..........++.+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 357999999999999 998888777655 777777544221110 0 00112233335555566
Q ss_pred HHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHH
Q 024228 106 LRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKV 180 (270)
Q Consensus 106 l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (270)
++.. ...++.+-|.|+||.+++..+..+|..+.+.....+..+..........
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~---------------------- 139 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWL---------------------- 139 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCc----------------------
Confidence 6553 3457899999999999999999998878887776665442111110000
Q ss_pred HHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHH
Q 024228 181 QFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKT 257 (270)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 257 (270)
+... ..|++..||+.|++||....+...+.+. ..++++.++|.+|...- +++ +.+..
T Consensus 140 ------------~~~~----~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~---~e~-~~~~~ 199 (206)
T KOG2112|consen 140 ------------PGVN----YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP---QEL-DDLKS 199 (206)
T ss_pred ------------cccC----cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH---HHH-HHHHH
Confidence 0000 2799999999999999876666555543 24789999999997753 333 45566
Q ss_pred HHHh
Q 024228 258 ILAS 261 (270)
Q Consensus 258 fl~~ 261 (270)
|+.+
T Consensus 200 ~~~~ 203 (206)
T KOG2112|consen 200 WIKT 203 (206)
T ss_pred HHHH
Confidence 6654
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-10 Score=90.13 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=76.8
Q ss_pred CCceEEEeCCCCCcccccH-----HHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHH-----HHHHHHHHHhCCC
Q 024228 44 KKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA-----ECMAKGLRKLGVE 112 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~-----~~~~~~l~~~~~~ 112 (270)
-+++++++|.+-.... .| ..++..|.++ ..|+.+++++-..+.. ..++++++ +.+..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~y-i~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFY-ILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCcee-EEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 4678999999876555 44 2466777777 9999999986555543 34455554 4445555556778
Q ss_pred ceEEEEEchhHHHHHHHHhhCccc-cccEEEecccCCCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDL-VESMVVTCSVMGLT 150 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~i~~~~~~~~~ 150 (270)
++.++|+|.||.++..+++.++.+ |+.++++.+..++.
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 999999999999999999988877 99999988776554
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1e-09 Score=76.27 Aligned_cols=170 Identities=15% Similarity=0.131 Sum_probs=96.0
Q ss_pred EEEeCCCCCccccc--HHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----CCceEEEEEch
Q 024228 48 VVLLHPFGFDGILT--WQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG----VEKCTLVGVSY 121 (270)
Q Consensus 48 vv~~hG~~~~~~~~--~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~l~G~S~ 121 (270)
||++||+.+++. . .. ++.+. .+.+|.+-.-.+ ...+....+.+.+.+..+. .+++.|+|+|+
T Consensus 2 IlYlHGF~SS~~-S~~~K--a~~l~----~~~p~~~~~~l~-----~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSP-GNHEK--VLQLQ----FIDPDVRLISYS-----TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCC-ccHHH--HHhhe----eeCCCCeEEECC-----CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 789999999888 4 32 11221 112222211001 1233443444555554321 15799999999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL 201 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (270)
||+.|..+|.++. + ..|+++|...+........ +.... ...-....+.++. ..-.
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv~P~~~L~~~i----g~~~~---y~~~~~~h~~eL~---------------~~~p 124 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNLFPEENMEGKI----DRPEE---YADIATKCVTNFR---------------EKNR 124 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCCChHHHHHHHh----CCCcc---hhhhhHHHHHHhh---------------hcCc
Confidence 9999999999975 4 5588898876533221111 10000 0000000011110 0001
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCc-eEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNA-TMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
-..+++..+.|++.+...+....+ ++ +..+.+|++|-+ ..-+.....|.+|++
T Consensus 125 ~r~~vllq~gDEvLDyr~a~~~y~----~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRTAEELH----PYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred ccEEEEEeCCCcccCHHHHHHHhc----cCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 346899999999998877665443 34 688889888876 455567788888884
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.7e-09 Score=88.01 Aligned_cols=127 Identities=14% Similarity=0.092 Sum_probs=85.0
Q ss_pred eeEEEeec--CCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHH-------------------HhhccceEEe
Q 024228 22 TQRTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL-------------------ALAKTYEVYV 77 (270)
Q Consensus 22 ~~~~i~~~--~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~-------------------~l~~~~~v~~ 77 (270)
..-++.+. .+..++||.... ....|.||++.|++|++. .+..+.+ .+.+..+++.
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccccceEE
Confidence 34456665 678888875543 256799999999999888 6644321 1223478999
Q ss_pred ecCC-CCCCCCCCCCC---CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C------ccc
Q 024228 78 PDFL-FFGSSVTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y------PDL 136 (270)
Q Consensus 78 ~d~~-g~G~s~~~~~~---~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~ 136 (270)
+|.| |.|.|...... .+.++.++++..+|..+ ...+++|.|.|+||..+-.+|.. . +-.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9966 99999866544 37788888888888764 44589999999999887666653 2 234
Q ss_pred cccEEEecccCCC
Q 024228 137 VESMVVTCSVMGL 149 (270)
Q Consensus 137 v~~~i~~~~~~~~ 149 (270)
++++++.++....
T Consensus 171 LkGi~IGng~~dp 183 (415)
T PF00450_consen 171 LKGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEEESE-SBH
T ss_pred cccceecCccccc
Confidence 8899999888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.9e-10 Score=81.87 Aligned_cols=198 Identities=12% Similarity=0.008 Sum_probs=111.2
Q ss_pred EeCCCC--CcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-hCCCceEEEEEchhHHHH
Q 024228 50 LLHPFG--FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK-LGVEKCTLVGVSYGGMVG 126 (270)
Q Consensus 50 ~~hG~~--~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~G~S~Gg~~a 126 (270)
++|..+ ++.. .|..+...|...+.++++|.+|++.+... ..+.+.+++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 445433 4555 78899999988899999999999866533 24566666655554443 345689999999999999
Q ss_pred HHHHhh---CccccccEEEecccCCCCchhh---hHhhhhccch-hhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhh
Q 024228 127 FKMAEM---YPDLVESMVVTCSVMGLTESVS---NAALERIGYE-SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKH 199 (270)
Q Consensus 127 ~~~a~~---~p~~v~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (270)
..++.+ .++.+.+++++++......... .......... .................+.... ... ...
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~ 151 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDARLTAMGAYLRLFG---GWT----PGP 151 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccchhhhHHHHHHHHhc---cCC----CCC
Confidence 888886 3456889988876543221100 0000000000 0000000000011111111000 000 112
Q ss_pred hheeeeEEEcCCCccC-CHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHH
Q 024228 200 ILEKIHLLWGENDKIF-DMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTI 258 (270)
Q Consensus 200 ~~~P~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~f 258 (270)
+.+|+.++.+++|... +......+.+......+++.+++ +|+.++ +++..+...+..|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~g-~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 152 VAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVPG-DHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEccC-chHHHHHHhHHHHHHHHHhh
Confidence 3379999999988654 22222334444334678888985 888875 5555566655554
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.3e-10 Score=83.15 Aligned_cols=178 Identities=17% Similarity=0.102 Sum_probs=109.1
Q ss_pred CCceeEEEeecCCeEEEE-EecC--C-C-CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNI-WVPK--K-T-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~-~~~~--~-~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~ 93 (270)
..-++-++...||..+.- +..+ + . .++..|||+-|..+..+ . .-+..-+.-.|.|+.+++||++.|.+.+...
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE-v-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~ 289 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE-V-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV 289 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE-e-eeecChHHhCceeeccCCCCccccCCCCCcc
Confidence 334566777778877632 2221 1 1 23567888888766544 1 1112233345999999999999999877554
Q ss_pred ChHHHHHHHHH-HHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhc
Q 024228 94 TASFQAECMAK-GLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL 170 (270)
Q Consensus 94 ~~~~~~~~~~~-~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (270)
+....++.+.+ .|..++ .+.+++.|+|.||.-++.+|..+|+ |+++|+-+++-+.-......
T Consensus 290 n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllpLAl~r-------------- 354 (517)
T KOG1553|consen 290 NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLPLALFR-------------- 354 (517)
T ss_pred cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhhHHhhh--------------
Confidence 44444444444 355555 4689999999999999999999998 99999987654321111000
Q ss_pred ccccHHHHHHHHHhhhhcC-CCChhhhhhhhheeeeEEEcCCCccCC
Q 024228 171 LPKTADALKVQFDIACYKL-PTLPAFVYKHILEKIHLLWGENDKIFD 216 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~~~~ 216 (270)
++..+. .......... .....+.+.++..|+.+|.-.+|+++.
T Consensus 355 MP~~~~---giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIit 398 (517)
T KOG1553|consen 355 MPTFFS---GIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIIT 398 (517)
T ss_pred chHHHH---HHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhh
Confidence 111111 1111111111 223456677777899999998888764
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-08 Score=75.65 Aligned_cols=125 Identities=22% Similarity=0.305 Sum_probs=81.6
Q ss_pred ceeEEEeecCCeEEEEE--ecCC-CCCCceEEEeCCCCCcccccHHHHH--HHhhcc--ceEEeecCC-C------CCCC
Q 024228 21 MTQRTIEIEPGTILNIW--VPKK-TTKKHAVVLLHPFGFDGILTWQFQV--LALAKT--YEVYVPDFL-F------FGSS 86 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~--~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~--~~l~~~--~~v~~~d~~-g------~G~s 86 (270)
.+...+.. +|....|+ .+.. +.+.|.||++||..++.. .++... ..|++. |-|+.+|-- + .+.+
T Consensus 35 ~~~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 35 SSVASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred CCcccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCccccccCCCccccc
Confidence 34445555 56555554 3333 244578999999999888 666554 666666 999988532 1 2222
Q ss_pred CCCCC----CCChHHHHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhCccccccEEEecccC
Q 024228 87 VTDRP----DRTASFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (270)
Q Consensus 87 ~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~ 147 (270)
..+.. ..+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11221 123333344444445555554 89999999999999999999999999988887665
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-09 Score=78.28 Aligned_cols=156 Identities=18% Similarity=0.206 Sum_probs=92.0
Q ss_pred cCCeEEEEEecCC-----CCCC-ceEEEeCCCCCcccccHHHHHHHh------hcc--ceEEeecCCC-CCCCCCCCCCC
Q 024228 29 EPGTILNIWVPKK-----TTKK-HAVVLLHPFGFDGILTWQFQVLAL------AKT--YEVYVPDFLF-FGSSVTDRPDR 93 (270)
Q Consensus 29 ~~g~~l~~~~~~~-----~~~~-~~vv~~hG~~~~~~~~~~~~~~~l------~~~--~~v~~~d~~g-~G~s~~~~~~~ 93 (270)
+.|.++.|....+ .+.- |.+||+||.+..+......+...+ ..+ +-|+++.+-- +-.++. ....
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~ 247 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLL 247 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccch
Confidence 3577777644332 1233 899999999877662332222111 111 3344444211 111111 1111
Q ss_pred ChHHHHHHHHHH-HHHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhc
Q 024228 94 TASFQAECMAKG-LRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL 170 (270)
Q Consensus 94 ~~~~~~~~~~~~-l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (270)
......+.+.++ .++. +..+|+++|.|+||+.++.++.++|+.+.+.+++++...... ..
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~-----lv------------ 310 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY-----LV------------ 310 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh-----hh------------
Confidence 222233344422 3333 456899999999999999999999999999999987544100 00
Q ss_pred ccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 171 LPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
+ .+++ .|+.++|+.+|.++|.+.++-+.+.+.
T Consensus 311 ---------~---------------~lk~--~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 311 ---------R---------------TLKK--APIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred ---------h---------------hhcc--CceEEEEecCCCccccCcceeehHHHH
Confidence 0 0000 799999999999999887766665554
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-10 Score=88.03 Aligned_cols=202 Identities=14% Similarity=-0.025 Sum_probs=111.3
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC--CCCCCCCCC---CCh---HHHHHHHHHHHHH------
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF--GSSVTDRPD---RTA---SFQAECMAKGLRK------ 108 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~--G~s~~~~~~---~~~---~~~~~~~~~~l~~------ 108 (270)
..|.|++-||.++... .|..+++.+++. |-|..+|.+|. |..+..... +.. -+...|+..+|+.
T Consensus 70 ~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 4689999999999988 999999999999 99999999984 333221111 111 1122333333332
Q ss_pred -------hCCCceEEEEEchhHHHHHHHHhhCcccc--c------cEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 109 -------LGVEKCTLVGVSYGGMVGFKMAEMYPDLV--E------SMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 109 -------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v--~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
++..+|.++|||+||+.++..+....+-. . +.+...+...- . ............... ...
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~-~---~~l~q~~av~~~~~~-~~~ 223 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLN-G---RLLNQCAAVWLPRQA-YDL 223 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcC-h---hhhccccccccchhh-hcc
Confidence 23458999999999999999887554311 0 01111111000 0 000000000000000 000
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHhcCC-ceEEEecCCCcceeecchHhH
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQVGQN-ATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~ 251 (270)
....++..+.........+...-+.++.+|++++.|..|.+.|.. ....-...+++. ..+..++++.|+.+++-.++.
T Consensus 224 rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 224 RDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 000011111111111122234445666699999999999977654 344455566622 468889999999998766553
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.2e-09 Score=84.11 Aligned_cols=177 Identities=13% Similarity=0.127 Sum_probs=113.9
Q ss_pred CCceEEEeCCCCC-c--cc--ccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH--------HhC
Q 024228 44 KKHAVVLLHPFGF-D--GI--LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR--------KLG 110 (270)
Q Consensus 44 ~~~~vv~~hG~~~-~--~~--~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~--------~~~ 110 (270)
..|.++++||.+. . ++ ..|........+...+-+||++.-- ...++...++-+..+.+ ++.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i------gG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI------GGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC------CCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 4678899999881 1 11 2333344444444888888887321 11334444444443333 234
Q ss_pred CCceEEEEEchhHHHHHHHHhhCc-cccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYP-DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (270)
..+++|+|.|||+.+++....... ..|.++|.++-+.......
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp------------------------------------ 292 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP------------------------------------ 292 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc------------------------------------
Confidence 568999999999988887776543 2488888877544322110
Q ss_pred CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc---------hHhHHHHHHHHHH
Q 024228 190 PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER---------PFVYNRQLKTILA 260 (270)
Q Consensus 190 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---------~~~~~~~i~~fl~ 260 (270)
....++.+-++..|+||+.|.+|..++++..+.+++++....+++++.+++|.+-... ..++...+.+|+.
T Consensus 293 rgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ 372 (784)
T KOG3253|consen 293 RGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIK 372 (784)
T ss_pred cCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHH
Confidence 0122333444558999999999999999999999999887789999999999986522 2345555555554
Q ss_pred hh
Q 024228 261 SL 262 (270)
Q Consensus 261 ~~ 262 (270)
+.
T Consensus 373 ef 374 (784)
T KOG3253|consen 373 EF 374 (784)
T ss_pred HH
Confidence 44
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.3e-08 Score=66.57 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=65.4
Q ss_pred EEEeCCCCCcccccHHHH--HHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHH
Q 024228 48 VVLLHPFGFDGILTWQFQ--VLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~--~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~ 125 (270)
||++||+.++.. ..... .+.+.+....+.+- . +....++...++.+..++...+.+...|+|.|+||+.
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~~~~i~y~-------~-p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDEDVRDIEYS-------T-PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhccccceeee-------c-CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 899999999888 55543 34555443222222 1 2233578888999999999998888999999999999
Q ss_pred HHHHHhhCccccccEEEecccCCCC
Q 024228 126 GFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 126 a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
|.+++.++. +++ |+++|...+.
T Consensus 73 At~l~~~~G--ira-v~~NPav~P~ 94 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVRPY 94 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcCch
Confidence 999999875 555 4556765543
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-07 Score=75.08 Aligned_cols=182 Identities=12% Similarity=0.105 Sum_probs=100.0
Q ss_pred eEEEEEecCC--CCCCceEEEeCCCCCcccccHHHHHHHh-hcc----ceEEeecCCCCC-CCCCCCCC-CChHHHHHHH
Q 024228 32 TILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQFQVLAL-AKT----YEVYVPDFLFFG-SSVTDRPD-RTASFQAECM 102 (270)
Q Consensus 32 ~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l-~~~----~~v~~~d~~g~G-~s~~~~~~-~~~~~~~~~~ 102 (270)
.++.++.+.. ..+.|+|+++||............+..| +++ ..++.+|..+.. ++...... .....+.+++
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eL 273 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQEL 273 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHH
Confidence 5566666643 2346889999995422210112223333 333 346777753211 11111111 1233345666
Q ss_pred HHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHH
Q 024228 103 AKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (270)
Q Consensus 103 ~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
.-++++. +.++.+|.|+||||..|+.++.++|+++.+++.+++........ ......
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~------------------~~~~~~ 335 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRG------------------GQQEGV 335 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCcc------------------CCchhH
Confidence 6666653 34578999999999999999999999999999999864322100 000000
Q ss_pred HHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcce
Q 024228 178 LKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLV 243 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~ 243 (270)
+...+..... ......+.+-+|+.|... .+..+.+.+.+. -+.++.+++| ||..
T Consensus 336 l~~~l~~~~~----------~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~ 392 (411)
T PRK10439 336 LLEQLKAGEV----------SARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDA 392 (411)
T ss_pred HHHHHHhccc----------CCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCH
Confidence 1111111000 000135777789888554 345566666654 2578888886 7864
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.8e-10 Score=86.90 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=64.0
Q ss_pred CCCceEEEeCCCCCcc-cccHHH-HHH-Hhhc--c-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH------hC
Q 024228 43 TKKHAVVLLHPFGFDG-ILTWQF-QVL-ALAK--T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK------LG 110 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~-~~~~~~-~~~-~l~~--~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~------~~ 110 (270)
.++|++|++|||.++. ...|.. +.. .+.. + ++|+++|+..--...............+.+..+|.. +.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 4689999999999988 335543 344 4555 4 999999996321110000001112223333333333 24
Q ss_pred CCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccCCC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGL 149 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~~~ 149 (270)
.++++|+|||+||++|-.++..... +|.++..++|+.+.
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 5689999999999999999988877 89999999998764
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1e-07 Score=68.89 Aligned_cols=200 Identities=15% Similarity=0.096 Sum_probs=115.6
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhccc------eEEeecCCCC----CCCCC----CC-------CCCChHHHHHHHHH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKTY------EVYVPDFLFF----GSSVT----DR-------PDRTASFQAECMAK 104 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~~------~v~~~d~~g~----G~s~~----~~-------~~~~~~~~~~~~~~ 104 (270)
-|.||+||.+|+.. ....++..|.+.+ -++.+|--|. |.=+. |. ...+..++...+..
T Consensus 46 iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 47899999999999 8888887776654 3555565552 11111 10 11344555666666
Q ss_pred HHHHh----CCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccH
Q 024228 105 GLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (270)
Q Consensus 105 ~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
++..| +..++-++||||||.-...|+..+.. .+..+|.++++.................... +...
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~-----~~~~ 199 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGP-----GLIK 199 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCc-----cccC
Confidence 66554 67899999999999999999887632 4899999987765211111111111100000 0000
Q ss_pred HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCC------ccCCHHHHHHHHHHhcCCc-e----EEEecCCCccee
Q 024228 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGEND------KIFDMQVARNLKEQVGQNA-T----MESIEKAGHLVN 244 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D------~~~~~~~~~~~~~~~~~~~-~----~~~~~~~gH~~~ 244 (270)
....+++.... ...+.. ..+|+|.|+-| ..||...+...+..++.+. . +..=+++.|.-+
T Consensus 200 t~y~~y~~~n~---k~v~~~------~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~l 270 (288)
T COG4814 200 TPYYDYIAKNY---KKVSPN------TEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKL 270 (288)
T ss_pred cHHHHHHHhcc---eeCCCC------cEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhcc
Confidence 11111111110 001100 67999999865 4566666666666665332 2 222355789888
Q ss_pred ecchHhHHHHHHHHHHh
Q 024228 245 LERPFVYNRQLKTILAS 261 (270)
Q Consensus 245 ~~~~~~~~~~i~~fl~~ 261 (270)
.|+|. +.+.+..||-+
T Consensus 271 hen~~-v~~yv~~FLw~ 286 (288)
T COG4814 271 HENPT-VAKYVKNFLWE 286 (288)
T ss_pred CCChh-HHHHHHHHhhc
Confidence 88876 66888888753
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.8e-08 Score=73.47 Aligned_cols=60 Identities=12% Similarity=0.036 Sum_probs=43.6
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc--C--CceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG--Q--NATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~--~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.|+++.+|..|.++|....+.+.+.+. + +++++.+++.+|....-. -.....+||.....
T Consensus 220 ~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 220 VPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFA 283 (290)
T ss_pred CCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHC
Confidence 899999999999999999888877754 2 567888888999864311 11334466665544
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.4e-10 Score=80.27 Aligned_cols=87 Identities=23% Similarity=0.223 Sum_probs=52.2
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ce---EEeecCCCCCCCCCCCCC----CChHHHHHHHHHHHHHhCCCceEEE
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YE---VYVPDFLFFGSSVTDRPD----RTASFQAECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~l~ 117 (270)
.||||+||.+++....|..+.+.|.++ |. ++++++-........... .+..++..-|.++++..+. ++-|+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 589999999995545999999999988 88 899998433221111000 1122344455555566688 99999
Q ss_pred EEchhHHHHHHHHhhC
Q 024228 118 GVSYGGMVGFKMAEMY 133 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~ 133 (270)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887644
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1e-08 Score=76.07 Aligned_cols=161 Identities=15% Similarity=0.123 Sum_probs=99.0
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCC------C---CCC------------CCC------
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV------T---DRP------------DRT------ 94 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~------~---~~~------------~~~------ 94 (270)
++-|.+||.||.+++.. .|..+.-.|+.+ |-|.+++.|-+-.+. . ++. +..
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 34589999999999999 999999999999 999999998643221 0 000 000
Q ss_pred --hHHHHHHH---HHHHHHh------------------------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 95 --ASFQAECM---AKGLRKL------------------------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 95 --~~~~~~~~---~~~l~~~------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
...-++.+ ..+|+.+ +..++.++|||+||..++...+.+. ++++.|++++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 00112222 2223222 1236889999999999988777654 4888888876
Q ss_pred cCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 146 VMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
+..+-... ...+...|+++|..+ | +-..+....+.+
T Consensus 274 WM~Pl~~~------------------------------------------~~~~arqP~~finv~-~-fQ~~en~~vmKk 309 (399)
T KOG3847|consen 274 WMFPLDQL------------------------------------------QYSQARQPTLFINVE-D-FQWNENLLVMKK 309 (399)
T ss_pred eecccchh------------------------------------------hhhhccCCeEEEEcc-c-ccchhHHHHHHh
Confidence 64321110 111222789998843 3 323455555555
Q ss_pred HhcC--CceEEEecCCCcceeecchH
Q 024228 226 QVGQ--NATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 226 ~~~~--~~~~~~~~~~gH~~~~~~~~ 249 (270)
..+. ...+.++.|+=|..+-+-|-
T Consensus 310 i~~~n~g~~~it~~GsVHqnfsDfpf 335 (399)
T KOG3847|consen 310 IESQNEGNHVITLDGSVHQNFSDFPF 335 (399)
T ss_pred hhCCCccceEEEEccceecccccCcc
Confidence 5542 34677788888876554443
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.96 E-value=1e-07 Score=71.53 Aligned_cols=210 Identities=13% Similarity=0.004 Sum_probs=112.9
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC---ceEEEEEchh
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE---KCTLVGVSYG 122 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~G~S~G 122 (270)
++|++=||.+.......+..+...+. +.++.+-.+-..... ........++.+.+.+...... ++.+-.+|.|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFW---PSKRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee---eccchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 46777788766652444444444334 888887655221111 1134445555566666554333 7999999998
Q ss_pred HHHHHHHHhh----C------ccccccEEEecccCCCCchhhhHhhhh-ccchhhhhh--cccccHHHHHHHHHhhhhcC
Q 024228 123 GMVGFKMAEM----Y------PDLVESMVVTCSVMGLTESVSNAALER-IGYESWVDF--LLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 123 g~~a~~~a~~----~------p~~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 189 (270)
|...+..... . -.+++++|+-+++.............. ......... ........+...........
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIFG 157 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8776655441 1 124889898777654332111111110 000000000 00000000000000000000
Q ss_pred CCChhh---------hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cchHhHHHHHH
Q 024228 190 PTLPAF---------VYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLK 256 (270)
Q Consensus 190 ~~~~~~---------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~ 256 (270)
...... ......+|-|+++++.|.+++.+..+++.+... .+++...++++.|..++ .+|+++.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~ 237 (240)
T PF05705_consen 158 YPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVD 237 (240)
T ss_pred CCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHH
Confidence 000000 011112899999999999999998888877654 24677888999999988 78999999999
Q ss_pred HHH
Q 024228 257 TIL 259 (270)
Q Consensus 257 ~fl 259 (270)
+|+
T Consensus 238 ~fw 240 (240)
T PF05705_consen 238 EFW 240 (240)
T ss_pred hhC
Confidence 884
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.4e-09 Score=85.02 Aligned_cols=92 Identities=14% Similarity=0.082 Sum_probs=68.0
Q ss_pred cccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC--CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc
Q 024228 57 DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD--RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 57 ~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
... .|..+++.|.+...+...|++|+|.+.+.... ...+.+.+.+.++.+..+.++++|+||||||.++..++..+|
T Consensus 106 ~~~-~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 106 EVY-YFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred hHH-HHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 345 89999999998844558999999998765321 123334444444455557789999999999999999998887
Q ss_pred c----ccccEEEecccCCC
Q 024228 135 D----LVESMVVTCSVMGL 149 (270)
Q Consensus 135 ~----~v~~~i~~~~~~~~ 149 (270)
+ .|+++|.++++...
T Consensus 185 ~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HhHHhHhccEEEECCCCCC
Confidence 6 37888999876543
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.88 E-value=6e-08 Score=73.41 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=76.4
Q ss_pred CceeEEEeecCCeEEEEEec--CCCCCCceEEEeCCCCCcccccH------HHHHHHhhcc--ceEEeecCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNIWVP--KKTTKKHAVVLLHPFGFDGILTW------QFQVLALAKT--YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~--~~~~~~~~vv~~hG~~~~~~~~~------~~~~~~l~~~--~~v~~~d~~g~G~s~~~ 89 (270)
.+++..++. |+..+--... ....+...||+.-|.++..+ .. ......+++. .+|+.+++||.|.|.+.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E-~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~ 188 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYE-NRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP 188 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhh-hhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC
Confidence 345666666 7887743222 22356789999999887666 31 1223344444 89999999999999876
Q ss_pred CCCCChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhC
Q 024228 90 RPDRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
. +.++++.|-.+.++.+ +.+.+++.|||+||.++..++.+.
T Consensus 189 ~---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 189 P---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred C---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 5 4577777766666655 235799999999999998876664
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.3e-07 Score=69.68 Aligned_cols=141 Identities=14% Similarity=0.113 Sum_probs=93.2
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc-c--hhhh--------hhcccccHHHH
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG-Y--ESWV--------DFLLPKTADAL 178 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~--~~~~--------~~~~~~~~~~~ 178 (270)
.+++++|.|.|==|..++..|+. ..||++++-+.-...-.........+.++ . ..+. ..+.......+
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L 248 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKL 248 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHH
Confidence 57799999999999999999884 46899888654332211222222222222 1 0111 11111122222
Q ss_pred HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 179 KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
.+......+ ..++..|.++|.|..|++..+....-+...+++...+..+|+++|.... ..+.+.+..|
T Consensus 249 ~~ivDP~~Y---------~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f 316 (367)
T PF10142_consen 249 MQIVDPYSY---------RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAF 316 (367)
T ss_pred HHhcCHHHH---------HHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHH
Confidence 232222222 3445599999999999999999999999999988899999999999865 5567888888
Q ss_pred HHhhh
Q 024228 259 LASLV 263 (270)
Q Consensus 259 l~~~~ 263 (270)
+....
T Consensus 317 ~~~~~ 321 (367)
T PF10142_consen 317 YNRIQ 321 (367)
T ss_pred HHHHH
Confidence 87653
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=4e-08 Score=79.30 Aligned_cols=231 Identities=13% Similarity=0.055 Sum_probs=137.3
Q ss_pred eeEEEeecCCeEEEEEecC-C--CCCCceEEEeCCCCCccc-ccHHHHHH-HhhccceEEeecCCCCCCCCCCC----CC
Q 024228 22 TQRTIEIEPGTILNIWVPK-K--TTKKHAVVLLHPFGFDGI-LTWQFQVL-ALAKTYEVYVPDFLFFGSSVTDR----PD 92 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~-~--~~~~~~vv~~hG~~~~~~-~~~~~~~~-~l~~~~~v~~~d~~g~G~s~~~~----~~ 92 (270)
+....+..||.+|.|+... . .++.|++|+--|+..-+. +.|..... .|.+....+..+.||=|+=.+.- ..
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 4445555699999987664 2 235788887766554443 45555544 45555888888999877544221 11
Q ss_pred CChHHHHHHHHHHHHHh---C---CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhh
Q 024228 93 RTASFQAECMAKGLRKL---G---VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~---~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
.+-....+|..++.+.| + .+++.+.|-|-||.+.-.+..++|+.+.++|+--|..++-. ...-..+..-.
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlR----Yh~l~aG~sW~ 550 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLR----YHLLTAGSSWI 550 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhh----hcccccchhhH
Confidence 33344566666666665 2 35789999999999999888999998888887666544211 11111122222
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCcce
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGHLV 243 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~ 243 (270)
..+-.+..+.....+.....+.... +. .-..|+||-.+..|.-|.|..++.++..+.. .+-+.+=-++||..
T Consensus 551 ~EYG~Pd~P~d~~~l~~YSPy~nl~-~g----~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g 625 (648)
T COG1505 551 AEYGNPDDPEDRAFLLAYSPYHNLK-PG----QKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGG 625 (648)
T ss_pred hhcCCCCCHHHHHHHHhcCchhcCC-cc----ccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccC
Confidence 2333444444444333222222211 00 1117999999999999989999999888761 22333334679988
Q ss_pred eecchHh--HHHHHHHHHHh
Q 024228 244 NLERPFV--YNRQLKTILAS 261 (270)
Q Consensus 244 ~~~~~~~--~~~~i~~fl~~ 261 (270)
--+..+. -...+..||.+
T Consensus 626 ~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 626 AAPTAEIARELADLLAFLLR 645 (648)
T ss_pred CCChHHHHHHHHHHHHHHHH
Confidence 6544332 22334456554
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.85 E-value=9e-07 Score=70.74 Aligned_cols=99 Identities=23% Similarity=0.270 Sum_probs=68.0
Q ss_pred CCceEEEe-----C--CCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-----CC
Q 024228 44 KKHAVVLL-----H--PFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-----GV 111 (270)
Q Consensus 44 ~~~~vv~~-----h--G~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~-----~~ 111 (270)
.++++|++ | |+|+.+. =..+...|...+.|+.+.+. +.+.+..++++......++++.+ +.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~--dSevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~ 139 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKP--DSEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDA 139 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCc--ccHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 45566665 3 3444433 12455677777777776553 23344567777776666666654 23
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.+.+|+|-|.||+.++.+|+.+|+.+.-+|+-+++...
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 48999999999999999999999999988887776543
|
Their function is unknown. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.8e-07 Score=70.96 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=69.8
Q ss_pred CCceEEEeCCCCCcccccHHH-------HHHHhhccceEEeecCCCCCCC-CCCCCCCChHHHHHHHHHHHHHhCCCceE
Q 024228 44 KKHAVVLLHPFGFDGILTWQF-------QVLALAKTYEVYVPDFLFFGSS-VTDRPDRTASFQAECMAKGLRKLGVEKCT 115 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~-------~~~~l~~~~~v~~~d~~g~G~s-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (270)
+.|.||++||+|-.-. .... +...|. ...++++|+.-.... ....-...+.+.++-...+++..+.++++
T Consensus 121 ~DpVlIYlHGGGY~l~-~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLG-TTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEec-CCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 4699999999886544 2222 223333 478999998744300 01111234455556666677677888999
Q ss_pred EEEEchhHHHHHHHHhhCc-----cccccEEEecccCCCC
Q 024228 116 LVGVSYGGMVGFKMAEMYP-----DLVESMVVTCSVMGLT 150 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p-----~~v~~~i~~~~~~~~~ 150 (270)
|+|-|.||.+++.+.+... ...+++|+++|+....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999988776421 1368999999998765
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.4e-08 Score=73.16 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=68.2
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhc---cceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHh----CCCce
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAK---TYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKL----GVEKC 114 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~----~~~~~ 114 (270)
+++..+||+||+..+........++.... .-.++.+.+|..|.-..-. ...+...-...+.++|+.+ +.++|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 45789999999998766222333322222 1579999999877532211 1123333345555555554 56799
Q ss_pred EEEEEchhHHHHHHHHhhC----c-----cccccEEEecccCC
Q 024228 115 TLVGVSYGGMVGFKMAEMY----P-----DLVESMVVTCSVMG 148 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~----p-----~~v~~~i~~~~~~~ 148 (270)
.|++||||+.+.+.+.... + .++..+++.+|-.+
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999998876542 1 25778888886554
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-07 Score=71.76 Aligned_cols=117 Identities=14% Similarity=0.040 Sum_probs=68.9
Q ss_pred EEEEEecCC---CCCCceEEEeCCCCCcccccH--HHHHHH-hhcc----ceEEeecCCCCCCCC--CC---------CC
Q 024228 33 ILNIWVPKK---TTKKHAVVLLHPFGFDGILTW--QFQVLA-LAKT----YEVYVPDFLFFGSSV--TD---------RP 91 (270)
Q Consensus 33 ~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~--~~~~~~-l~~~----~~v~~~d~~g~G~s~--~~---------~~ 91 (270)
++.++.|.. ..+-|+|+++||...... .+ ...+.. ..+. .-+++++..+.+... .. ..
T Consensus 9 ~~~VylP~~y~~~~~~PvlylldG~~~~~~-~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~ 87 (251)
T PF00756_consen 9 RVWVYLPPGYDPSKPYPVLYLLDGQSGWFR-NGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADD 87 (251)
T ss_dssp EEEEEECTTGGTTTTEEEEEEESHTTHHHH-HHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTS
T ss_pred EEEEEECCCCCCCCCCEEEEEccCCccccc-cchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccccccc
Confidence 445555544 345688999999722221 22 112222 2221 445666665444110 00 01
Q ss_pred CCC----hHHHHHHHHHHHHHh-CC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 92 DRT----ASFQAECMAKGLRKL-GV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 92 ~~~----~~~~~~~~~~~l~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
... .+.+.++|...|+.- .. ++..|+|+||||..|+.++.++|+.+.+++.++|.....
T Consensus 88 ~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 88 SGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp TTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred CCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 111 233455666666653 22 237999999999999999999999999999999875543
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.76 E-value=9.3e-06 Score=62.90 Aligned_cols=202 Identities=10% Similarity=0.063 Sum_probs=117.1
Q ss_pred eeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCCCC--CCCCC-------
Q 024228 22 TQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFF--GSSVT------- 88 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~--G~s~~------- 88 (270)
+..++...+...+..+.+... .....||++||.+.+.. .....+...|.+. +.++++.+|.- .....
T Consensus 63 e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred hcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 455666644455666665543 44679999999998864 2334455777777 99999988861 10000
Q ss_pred -------CCCCC-------------Ch----HHHHHHHHHH---HHHhCCCceEEEEEchhHHHHHHHHhhCcc-ccccE
Q 024228 89 -------DRPDR-------------TA----SFQAECMAKG---LRKLGVEKCTLVGVSYGGMVGFKMAEMYPD-LVESM 140 (270)
Q Consensus 89 -------~~~~~-------------~~----~~~~~~~~~~---l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~ 140 (270)
..... .. +.+..-+.+. +...+..+++|+||+.|+.+++.+....+. .++++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daL 222 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDAL 222 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeE
Confidence 00000 01 1122222223 333355669999999999999999998764 58999
Q ss_pred EEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHH
Q 024228 141 VVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 141 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
|++++..+..... ..+. ..+.....|+|=|++.....+ ...+
T Consensus 223 V~I~a~~p~~~~n----------------------~~l~---------------~~la~l~iPvLDi~~~~~~~~-~~~a 264 (310)
T PF12048_consen 223 VLINAYWPQPDRN----------------------PALA---------------EQLAQLKIPVLDIYSADNPAS-QQTA 264 (310)
T ss_pred EEEeCCCCcchhh----------------------hhHH---------------HHhhccCCCEEEEecCCChHH-HHHH
Confidence 9999865432110 0011 112233389999988773332 2222
Q ss_pred HH---HHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 221 RN---LKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 221 ~~---~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.. ..++.. .+.+-+.+.+..|... ...+.+.+.|..||+++
T Consensus 265 ~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 265 KQRKQAAKRNKKPDYRQIQLPGLPDNPS-GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHhccCCCceeEecCCCCCChh-hHHHHHHHHHHHHHHhh
Confidence 11 111111 2456666776666553 22233889999999865
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.3e-08 Score=72.00 Aligned_cols=86 Identities=16% Similarity=0.131 Sum_probs=50.7
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhc---cceEEeecCCCCCCCCCCCCCCChHHH----HHHHHHHHHHhCC--Cce
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAK---TYEVYVPDFLFFGSSVTDRPDRTASFQ----AECMAKGLRKLGV--EKC 114 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~G~s~~~~~~~~~~~~----~~~~~~~l~~~~~--~~~ 114 (270)
+...||++||+.++.. .|..+...+.. .+.-..+...+..... .....+++.. ++++.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 4568999999999988 88877766655 2221122222221111 1112334433 4444444444443 489
Q ss_pred EEEEEchhHHHHHHHHh
Q 024228 115 TLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~ 131 (270)
.++|||+||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999866554
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.9e-06 Score=65.68 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=31.3
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|++++|+|.||++|...|.-.|-.+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998998876665544
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.4e-06 Score=63.01 Aligned_cols=100 Identities=20% Similarity=0.125 Sum_probs=63.6
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH---hCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK---LGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~l~ 117 (270)
...|||+.||++.+.. .....+.+.+.+ .+.+.++. .|-+.. ..--....+.++.+.+.+.. +. +-+.++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~-~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKELS-EGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchhhc-CceEEE
Confidence 3578999999994433 267777777752 34444443 232211 11113344444444444433 22 358999
Q ss_pred EEchhHHHHHHHHhhCcc--ccccEEEecccC
Q 024228 118 GVSYGGMVGFKMAEMYPD--LVESMVVTCSVM 147 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~ 147 (270)
|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999876 499999998763
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-07 Score=74.18 Aligned_cols=102 Identities=22% Similarity=0.115 Sum_probs=79.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ce---EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YE---VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S 120 (270)
.-+++++||++.+.. .|..+...+... +. ++.+++++. +...+.....+++..-+.+++...+.+++.++|||
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 458999999987777 888877666665 55 888888755 22223335566667777778888888999999999
Q ss_pred hhHHHHHHHHhhCc--cccccEEEecccCCC
Q 024228 121 YGGMVGFKMAEMYP--DLVESMVVTCSVMGL 149 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~~ 149 (270)
+||..+..++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999998887 789999999887543
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-05 Score=65.13 Aligned_cols=125 Identities=16% Similarity=0.097 Sum_probs=78.8
Q ss_pred eEEEeec--CCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHH----------------H-------hhccce
Q 024228 23 QRTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL----------------A-------LAKTYE 74 (270)
Q Consensus 23 ~~~i~~~--~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~----------------~-------l~~~~~ 74 (270)
..++.+. .+..+.||...+ +...|.++++.|++|++. .+..+.+ . ..+..+
T Consensus 41 sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 41 TGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 4455664 356777765432 245799999999998877 5533210 1 122378
Q ss_pred EEeecC-CCCCCCCCCCC--CCChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C------c
Q 024228 75 VYVPDF-LFFGSSVTDRP--DRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y------P 134 (270)
Q Consensus 75 v~~~d~-~g~G~s~~~~~--~~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------p 134 (270)
++.+|. .|.|.|..... ..+.+..++++.+++..+ ...+++|.|.|+||..+-.+|.. . +
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 999995 58898864332 123334456666666553 23589999999999876666543 1 1
Q ss_pred cccccEEEecccCC
Q 024228 135 DLVESMVVTCSVMG 148 (270)
Q Consensus 135 ~~v~~~i~~~~~~~ 148 (270)
-.++++++.++...
T Consensus 200 inl~Gi~igng~td 213 (437)
T PLN02209 200 INLQGYVLGNPITH 213 (437)
T ss_pred eeeeeEEecCcccC
Confidence 14678888887654
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.2e-06 Score=63.00 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=54.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccce-EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYE-VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~-v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~G 122 (270)
++..|||+.|++.+.. .+..+. +.+.+. ++++|||..-. +. | + -+.+.+.|+|+|||
T Consensus 10 ~~~LilfF~GWg~d~~-~f~hL~--~~~~~D~l~~yDYr~l~~--------d~-----~----~--~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 10 GKELILFFAGWGMDPS-PFSHLI--LPENYDVLICYDYRDLDF--------DF-----D----L--SGYREIYLVAWSMG 67 (213)
T ss_pred CCeEEEEEecCCCChH-Hhhhcc--CCCCccEEEEecCccccc--------cc-----c----c--ccCceEEEEEEeHH
Confidence 3679999999999887 554432 233433 57788873211 10 1 1 24579999999999
Q ss_pred HHHHHHHHhhCccccccEEEecccCC
Q 024228 123 GMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 123 g~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
-.+|..+....| ++..|.+++...
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCC
Confidence 999988866543 677777776543
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.57 E-value=1e-05 Score=61.18 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=64.8
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH---hCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK---LGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~l~ 117 (270)
...|+|+.||+|.+.. .....+.+.+.+. ..+.++.. |.+....--....+.++.+.+.+.. +. +-+.++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEE
Confidence 3568999999998766 2344455555433 55555543 3332111123444445555444443 22 359999
Q ss_pred EEchhHHHHHHHHhhCcc--ccccEEEecccC
Q 024228 118 GVSYGGMVGFKMAEMYPD--LVESMVVTCSVM 147 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~ 147 (270)
|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999986 599999998763
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.56 E-value=6.2e-07 Score=68.52 Aligned_cols=106 Identities=15% Similarity=0.146 Sum_probs=68.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHh----CCCce
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKL----GVEKC 114 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~----~~~~~ 114 (270)
..+..+||+||+..+-...-.++++-.... ...+.+.+|..|.--.-..+ .+...-..++..+|+.+ ..+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 457899999999876553333344333322 77888999976653221111 22233344555555544 46789
Q ss_pred EEEEEchhHHHHHHHHhhC--------ccccccEEEecccCC
Q 024228 115 TLVGVSYGGMVGFKMAEMY--------PDLVESMVVTCSVMG 148 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~--------p~~v~~~i~~~~~~~ 148 (270)
+|++||||.++++.+..+. +.+++-+|+.+|-.+
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 9999999999998877642 346888888777554
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.7e-05 Score=62.80 Aligned_cols=126 Identities=14% Similarity=0.033 Sum_probs=82.3
Q ss_pred eeEEEeec--CCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHHH-------------------hhccceEEe
Q 024228 22 TQRTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVLA-------------------LAKTYEVYV 77 (270)
Q Consensus 22 ~~~~i~~~--~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------l~~~~~v~~ 77 (270)
..-++.+. .+..++||...+ +..+|.||++.|++|++. .- .+... ..+..+++.
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS-l~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLf 122 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS-LG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILF 122 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc-hh-hhhhhcCCeEEcCCCCcceeCCccccccccEEE
Confidence 34567775 588998876544 245789999999999886 33 22211 112267888
Q ss_pred ecCC-CCCCCCCCCCC---CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C-----c-cc
Q 024228 78 PDFL-FFGSSVTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y-----P-DL 136 (270)
Q Consensus 78 ~d~~-g~G~s~~~~~~---~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~-----p-~~ 136 (270)
+|.| |.|.|-..... .+.+..++|...++... ...+++|.|-|++|...-.+|.. + | -.
T Consensus 123 Ld~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 123 LDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred EecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 9987 78888644431 34555566666555442 34689999999999777666653 2 1 24
Q ss_pred cccEEEecccCCC
Q 024228 137 VESMVVTCSVMGL 149 (270)
Q Consensus 137 v~~~i~~~~~~~~ 149 (270)
++|+++-+|....
T Consensus 203 LkG~~IGNg~td~ 215 (454)
T KOG1282|consen 203 LKGYAIGNGLTDP 215 (454)
T ss_pred ceEEEecCcccCc
Confidence 7888887776553
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.1e-05 Score=61.10 Aligned_cols=126 Identities=16% Similarity=0.053 Sum_probs=77.6
Q ss_pred eeEEEeecC--CeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHH---H-------------Hh-------hccc
Q 024228 22 TQRTIEIEP--GTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQV---L-------------AL-------AKTY 73 (270)
Q Consensus 22 ~~~~i~~~~--g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~---~-------------~l-------~~~~ 73 (270)
..-++++.+ +..++||...+ +...|.|+++.|++|++. .+..+. + .+ .+..
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS-~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSC-LGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHH-HHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 355666643 56777765433 245799999999988776 332211 1 11 2237
Q ss_pred eEEeecC-CCCCCCCCCCCC--CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C------
Q 024228 74 EVYVPDF-LFFGSSVTDRPD--RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y------ 133 (270)
Q Consensus 74 ~v~~~d~-~g~G~s~~~~~~--~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------ 133 (270)
+++.+|. -|.|.|...... .+-+..++++..++..+ ...+++|.|.|+||..+-.+|.. .
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 8999994 589998644322 11122335555555442 34589999999999877666553 1
Q ss_pred ccccccEEEecccCC
Q 024228 134 PDLVESMVVTCSVMG 148 (270)
Q Consensus 134 p~~v~~~i~~~~~~~ 148 (270)
+-.++++++-+|...
T Consensus 197 ~inLkGi~iGNg~t~ 211 (433)
T PLN03016 197 PINLQGYMLGNPVTY 211 (433)
T ss_pred cccceeeEecCCCcC
Confidence 124788888887653
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.3e-06 Score=59.00 Aligned_cols=102 Identities=14% Similarity=0.044 Sum_probs=75.0
Q ss_pred CceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC----CceEEE
Q 024228 45 KHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV----EKCTLV 117 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~ 117 (270)
+..|||+-|.+..-- ..-..+...|.+. |.++-+.++.+- ...+..++.+-++|+..++++++. ..++|+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc---cccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 467889988876443 3556677888887 999999876321 112335677778999999998753 279999
Q ss_pred EEchhHHHHHHHHhh--CccccccEEEecccCCC
Q 024228 118 GVSYGGMVGFKMAEM--YPDLVESMVVTCSVMGL 149 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~~ 149 (270)
|||.|+.-.+.|... .+..+.+.|+.+|..+.
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 999999988888733 35578888988887653
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.1e-06 Score=70.19 Aligned_cols=115 Identities=17% Similarity=0.145 Sum_probs=72.9
Q ss_pred EEEEEecCC--CCCCceEEEeCCCCCcccccH--HHHHHHhhcc--ceEEeecCCCCCCCCCCC-------CCCChHHHH
Q 024228 33 ILNIWVPKK--TTKKHAVVLLHPFGFDGILTW--QFQVLALAKT--YEVYVPDFLFFGSSVTDR-------PDRTASFQA 99 (270)
Q Consensus 33 ~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~--~~v~~~d~~g~G~s~~~~-------~~~~~~~~~ 99 (270)
+.+|+.... .+++|.+|++-|= +.....+ ..+...|+++ -.++++++|.+|.|.+.. ...+.++..
T Consensus 15 ~qRY~~n~~~~~~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QAL 93 (434)
T PF05577_consen 15 SQRYWVNDQYYKPGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQAL 93 (434)
T ss_dssp EEEEEEE-TT--TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHH
T ss_pred EEEEEEEhhhcCCCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHH
Confidence 345655433 2346666666543 3333122 2345667776 789999999999997532 236788889
Q ss_pred HHHHHHHHHhC-------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 100 ECMAKGLRKLG-------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 100 ~~~~~~l~~~~-------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+|+..+++++. ..|++++|-|+||.+|..+-.++|+.|.+.+..+++..
T Consensus 94 aD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 94 ADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 99998887763 23799999999999999999999999999998887754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.4e-06 Score=69.01 Aligned_cols=237 Identities=14% Similarity=0.072 Sum_probs=124.4
Q ss_pred ceeEEEeecCCeEEEEEe-cCC----CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC---C
Q 024228 21 MTQRTIEIEPGTILNIWV-PKK----TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD---R 90 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~-~~~----~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~---~ 90 (270)
.++..+..+||..+.... ... .+++|.+|..+|.-+-+- ..|..-...|.+. +-....|.||=|.-... .
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 456667777998664211 111 236787877777554332 3444333333445 66777788986644321 1
Q ss_pred -----CCCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 91 -----PDRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 91 -----~~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
...+++++......+++. ...++..+.|.|.||.++..++..+|+.+.++|+--|+.+.-........ .
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~til----p 596 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTIL----P 596 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCcc----c
Confidence 124555555555555543 23468999999999999999999999999999887776553221111110 0
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHH----HHHHhcC------CceE
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARN----LKEQVGQ------NATM 233 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~----~~~~~~~------~~~~ 233 (270)
.....+-..........+.....+..-..+... ....-+|+..+.+|.-|++..... ++..... ..-+
T Consensus 597 lt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q--~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll 674 (712)
T KOG2237|consen 597 LTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQ--VQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLL 674 (712)
T ss_pred cchhhhcccCChhhhhhhheecccCccCCCchh--ccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEE
Confidence 000111111222223333322222221111110 012568899999987665543333 3333321 2346
Q ss_pred EEecCCCcceeecchHhHH--HHHHHHHHhhh
Q 024228 234 ESIEKAGHLVNLERPFVYN--RQLKTILASLV 263 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~--~~i~~fl~~~~ 263 (270)
.+-.++||..--...+.+. .....||.+..
T Consensus 675 ~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~ 706 (712)
T KOG2237|consen 675 RIETKAGHGAEKPRFKQIEEAAFRYAFLAKML 706 (712)
T ss_pred EEecCCccccCCchHHHHHHHHHHHHHHHHHh
Confidence 6678999987432222221 33445665543
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.8e-07 Score=72.60 Aligned_cols=126 Identities=15% Similarity=0.112 Sum_probs=87.3
Q ss_pred eEEEeecCCeEEEE--EecCCCCCCceEEEeC--CCCCccccc--HHHHHH---Hhhcc-ceEEeecCCCCCCCCCCCCC
Q 024228 23 QRTIEIEPGTILNI--WVPKKTTKKHAVVLLH--PFGFDGILT--WQFQVL---ALAKT-YEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 23 ~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~h--G~~~~~~~~--~~~~~~---~l~~~-~~v~~~d~~g~G~s~~~~~~ 92 (270)
...|...||++|+. |.+....+.|+++..+ ...-..... -....+ .++.+ |.|+..|.||.|.|++....
T Consensus 21 ~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~ 100 (563)
T COG2936 21 DVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP 100 (563)
T ss_pred eeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce
Confidence 35566779999975 5555446678888888 322221101 112233 45555 99999999999999976544
Q ss_pred C-C-hHHHHHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 93 R-T-ASFQAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 93 ~-~-~~~~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
. + ..+-..|+.++|.+.. ..++..+|.|++|...+.+|+..|..+++++...+..+
T Consensus 101 ~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 101 ESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred eccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 2 2 2223446666666653 35899999999999999999999888999988777654
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.8e-06 Score=60.39 Aligned_cols=209 Identities=13% Similarity=0.075 Sum_probs=111.7
Q ss_pred CceEEEeCCCCCcccccHHH--HHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH----HHHH----------
Q 024228 45 KHAVVLLHPFGFDGILTWQF--QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA----KGLR---------- 107 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~--~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~----~~l~---------- 107 (270)
++.-+.+-|-+... +.+. +..-+.++ ...+.+.-|-+|+..++..-...-..+.|+. +.|+
T Consensus 113 ~~KOG~~a~tgdh~--y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 113 ADLCLSWALTGDHV--YTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CCeeEEEeecCCce--eEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 44445555544443 3333 23334444 8888889998988765432222222222321 1222
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh-------ccc----hhhhhhcc-----
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER-------IGY----ESWVDFLL----- 171 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~----- 171 (270)
..+..++.++|.||||.+|..+...++..|.-+-++++.... .......+.. ... ........
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~as-vs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~ 269 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKAS-VSATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQSYH 269 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccc-hhhhhhhhhhhhHHHHhhccCcchhhhhhhCchhhHH
Confidence 235679999999999999999988776545444333332111 0000000000 000 00000000
Q ss_pred -------cccHHHHHHHHHhhhhcCCCChhhhhhhhhee-----eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCC
Q 024228 172 -------PKTADALKVQFDIACYKLPTLPAFVYKHILEK-----IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 239 (270)
Q Consensus 172 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (270)
.+.......++..... .-..+..+.+| +.++.+++|..+|......+++..| ++++..++ +
T Consensus 270 ~~~~~~srn~~~E~~~~Mr~vmd-----~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WP-g~eVr~~e-g 342 (371)
T KOG1551|consen 270 LLSKEQSRNSRKESLIFMRGVMD-----ECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWP-GCEVRYLE-G 342 (371)
T ss_pred HHHHHhhhcchHHHHHHHHHHHH-----hhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCC-CCEEEEee-c
Confidence 0000001111100000 00011112233 5778899999999988899999998 99999999 5
Q ss_pred Ccceee-cchHhHHHHHHHHHHhhh
Q 024228 240 GHLVNL-ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 240 gH~~~~-~~~~~~~~~i~~fl~~~~ 263 (270)
||.... -+.+.+.+.|.+-|++..
T Consensus 343 GHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 343 GHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred CceeeeehhchHHHHHHHHHHHhhh
Confidence 898644 667888899999888775
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.3e-05 Score=62.03 Aligned_cols=215 Identities=21% Similarity=0.163 Sum_probs=112.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCC----------CCCCCCCChH--------HHHHHHHH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSS----------VTDRPDRTAS--------FQAECMAK 104 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s----------~~~~~~~~~~--------~~~~~~~~ 104 (270)
.-|.+++.||+++... ........++.. +.++..+...+|.+ .......... ....+...
T Consensus 48 ~~p~v~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 48 KLPAVVFLHGFGSSKE-QSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred cCceEEeccCcccccc-CcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 4688999999999888 544466666666 77666664222222 2111111100 00111111
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccCCCCchhh---------hHhhhhccchhhhhhcccc
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGLTESVS---------NAALERIGYESWVDFLLPK 173 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 173 (270)
... ...+....|++.|+..+..++...+. ....++.++.......... ................ ..
T Consensus 127 ~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 203 (299)
T COG1073 127 LGA--SLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPL-PA 203 (299)
T ss_pred Hhh--hcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCC-Cc
Confidence 111 12578888999999888888877752 2333333332221111000 0000000000000000 00
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEEEecCCCcceeecchH--
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHIL-EKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLERPF-- 249 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~-- 249 (270)
..........................+. +|+|+++|.+|..+|...+..+.+.... ..+...+++++|........
T Consensus 204 ~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 283 (299)
T COG1073 204 PEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAV 283 (299)
T ss_pred ccccccccccchhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHH
Confidence 0000000000000011111222233333 7999999999999999999999998875 57888889999998864433
Q ss_pred -hHHHHHHHHHHhh
Q 024228 250 -VYNRQLKTILASL 262 (270)
Q Consensus 250 -~~~~~i~~fl~~~ 262 (270)
+..+.+.+|+.+.
T Consensus 284 ~~~~~~~~~f~~~~ 297 (299)
T COG1073 284 EQALDKLAEFLERH 297 (299)
T ss_pred HHHHHHHHHHHHHh
Confidence 6778888998764
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.2e-06 Score=72.98 Aligned_cols=119 Identities=18% Similarity=0.112 Sum_probs=72.5
Q ss_pred ecCCeEEEEEecCC---CCCCceEEEeCCCCCccc--ccHHHHHHHhhc--c-ceEEeecCC-C---CCCCCCC--CCCC
Q 024228 28 IEPGTILNIWVPKK---TTKKHAVVLLHPFGFDGI--LTWQFQVLALAK--T-YEVYVPDFL-F---FGSSVTD--RPDR 93 (270)
Q Consensus 28 ~~~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~--~-~~v~~~d~~-g---~G~s~~~--~~~~ 93 (270)
.+|...+.++.+.. .++.|+||++||++.... ..+ ....|.. . +.|+++++| | +..+... ....
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~ 152 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNY 152 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcch
Confidence 34778888888754 245699999999763322 021 1222322 2 899999999 3 2222211 1122
Q ss_pred ChHHH---HHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 94 TASFQ---AECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 94 ~~~~~---~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
...+. .+.+.+-++.++ .++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 23333 333444444554 4589999999999998877765 2446888888876543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.3e-05 Score=63.19 Aligned_cols=221 Identities=13% Similarity=0.091 Sum_probs=115.5
Q ss_pred eeEEEeecCCeEEEE---EecC--CCCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC-----
Q 024228 22 TQRTIEIEPGTILNI---WVPK--KTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD----- 89 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~---~~~~--~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~----- 89 (270)
+...++..||.++-+ +... ...+.|.+|.--|.-+... ..|....-.|.++ +-.-..-.||=|+-...
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~G 499 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDG 499 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhh
Confidence 344455568887643 2211 2345677777666444333 3444333334444 33333345665443221
Q ss_pred ---CCCCChHHHHHHHHHHHHHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 90 ---RPDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 90 ---~~~~~~~~~~~~~~~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
....++.++.+....+++.= ..+.++++|-|.||++....+...|+.++++|+--|+.+.-..+....+ .+...
T Consensus 500 K~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~sl-PLT~~ 578 (682)
T COG1770 500 KLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSL-PLTVT 578 (682)
T ss_pred hhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCC-CCCcc
Confidence 12356666666665555542 2457999999999999999999999999999998887764333222111 11111
Q ss_pred hhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCce---EEEecC
Q 024228 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNAT---MESIEK 238 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~---~~~~~~ 238 (270)
.+..+-.+.......-+.+...+.. .-++-..|+|++.|.+|+.|..-...++..++. .+.. +..=-+
T Consensus 579 E~~EWGNP~d~e~y~yikSYSPYdN------V~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~ 652 (682)
T COG1770 579 EWDEWGNPLDPEYYDYIKSYSPYDN------VEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMD 652 (682)
T ss_pred chhhhCCcCCHHHHHHHhhcCchhc------cccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEeccc
Confidence 2222222332221111111111111 011122789999999999886544444444433 1221 222246
Q ss_pred CCcceeecchH
Q 024228 239 AGHLVNLERPF 249 (270)
Q Consensus 239 ~gH~~~~~~~~ 249 (270)
+||...-...+
T Consensus 653 aGHgG~SgRf~ 663 (682)
T COG1770 653 AGHGGASGRFQ 663 (682)
T ss_pred ccCCCCCCchH
Confidence 89976554443
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.37 E-value=2e-06 Score=55.03 Aligned_cols=62 Identities=18% Similarity=0.221 Sum_probs=54.8
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.|+|++.++.|+..|.+.++.+++.++ +.+++.+++.||........-+.+.+.+||..-.-
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~-~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~l 96 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLP-GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGTL 96 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCC-CceEEEEeccCcceecCCChHHHHHHHHHHHcCCC
Confidence 799999999999999999999999998 79999999999999864446678889999986543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.3e-06 Score=58.95 Aligned_cols=193 Identities=15% Similarity=0.159 Sum_probs=104.9
Q ss_pred EEEEecCCC-C--CCceEEEeCCCCCcccccHHH--HH-HHhhcc-ceEEeecC--CCC---CCCCCCCC--------CC
Q 024228 34 LNIWVPKKT-T--KKHAVVLLHPFGFDGILTWQF--QV-LALAKT-YEVYVPDF--LFF---GSSVTDRP--------DR 93 (270)
Q Consensus 34 l~~~~~~~~-~--~~~~vv~~hG~~~~~~~~~~~--~~-~~l~~~-~~v~~~d~--~g~---G~s~~~~~--------~~ 93 (270)
..++.+... . .-|++.++.|+..+.. .+.. -. +.-+++ +.|+.+|- ||. |+++.... +-
T Consensus 30 f~vylPp~a~~~k~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnA 108 (283)
T KOG3101|consen 30 FGVYLPPDAPRGKRCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNA 108 (283)
T ss_pred EEEecCCCcccCCcCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEec
Confidence 344555432 2 2478999999998887 5432 12 333444 88899985 443 22221110 01
Q ss_pred Ch----------HHHHHHHHHHHHH----hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh
Q 024228 94 TA----------SFQAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 94 ~~----------~~~~~~~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
+. +...+.+.+++.. ++..++.+.||||||.-|+..+.++|.+.+.+-..+|...+..-....
T Consensus 109 t~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGq--- 185 (283)
T KOG3101|consen 109 TQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQ--- 185 (283)
T ss_pred ccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchH---
Confidence 11 2234455555542 244579999999999999999999999999988888876543211111
Q ss_pred hccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh---eeeeEEEcCCCccCCHHH-HHHHHHHhc----CCc
Q 024228 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL---EKIHLLWGENDKIFDMQV-ARNLKEQVG----QNA 231 (270)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~P~l~i~g~~D~~~~~~~-~~~~~~~~~----~~~ 231 (270)
..+..+ .......+.. +....++..+. .-+||=.|+.|.+..... -+.+.+... ...
T Consensus 186 ----KAf~gY-LG~~ka~W~~----------yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v 250 (283)
T KOG3101|consen 186 ----KAFTGY-LGDNKAQWEA----------YDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPV 250 (283)
T ss_pred ----HHhhcc-cCCChHHHhh----------cchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccE
Confidence 000111 1111111111 11111222222 457888999999876221 122333322 134
Q ss_pred eEEEecCCCcceee
Q 024228 232 TMESIEKAGHLVNL 245 (270)
Q Consensus 232 ~~~~~~~~gH~~~~ 245 (270)
.+...+|-.|....
T Consensus 251 ~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 251 VFRLQEGYDHSYYF 264 (283)
T ss_pred EEEeecCCCcceee
Confidence 56677888887754
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.3e-05 Score=67.23 Aligned_cols=123 Identities=14% Similarity=0.072 Sum_probs=68.5
Q ss_pred eEEEeecCCeEEEEEecCCC--------CCCceEEEeCCCCCcccccHHHHHHHhhc-----------------cceEEe
Q 024228 23 QRTIEIEPGTILNIWVPKKT--------TKKHAVVLLHPFGFDGILTWQFQVLALAK-----------------TYEVYV 77 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~--------~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-----------------~~~v~~ 77 (270)
++.-+..+...++.|..|.. .++-||+|++|..|+.. ..+.++..... +++.++
T Consensus 59 ~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFa 137 (973)
T KOG3724|consen 59 ERLTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFA 137 (973)
T ss_pred ccccCCCCceEEEEecccccccccccccCCCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEE
Confidence 33334445566665544431 35679999999999887 77766543321 155666
Q ss_pred ecCCCCCCCCCCCCCCChHHHHHHHHH----HHHHhC---------CCceEEEEEchhHHHHHHHHhhC---ccccccEE
Q 024228 78 PDFLFFGSSVTDRPDRTASFQAECMAK----GLRKLG---------VEKCTLVGVSYGGMVGFKMAEMY---PDLVESMV 141 (270)
Q Consensus 78 ~d~~g~G~s~~~~~~~~~~~~~~~~~~----~l~~~~---------~~~~~l~G~S~Gg~~a~~~a~~~---p~~v~~~i 141 (270)
+|+-+ +-. .....+..+.++-+.+ +++... ...++++||||||.+|..++..- ++.|.-++
T Consensus 138 VDFnE--e~t-Am~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntII 214 (973)
T KOG3724|consen 138 VDFNE--EFT-AMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTII 214 (973)
T ss_pred Ecccc--hhh-hhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhh
Confidence 66532 000 0011233333333333 333222 23499999999999998665432 34566666
Q ss_pred EecccCCC
Q 024228 142 VTCSVMGL 149 (270)
Q Consensus 142 ~~~~~~~~ 149 (270)
..+++...
T Consensus 215 TlssPH~a 222 (973)
T KOG3724|consen 215 TLSSPHAA 222 (973)
T ss_pred hhcCcccC
Confidence 66665443
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=8.7e-06 Score=65.08 Aligned_cols=120 Identities=19% Similarity=0.188 Sum_probs=75.9
Q ss_pred cCCeEEEEEecC-CCCCCceEEEeCCCCCcccc--cHHHHHHHhhcc--ceEEeecCCC--CCCCC--------CCCCCC
Q 024228 29 EPGTILNIWVPK-KTTKKHAVVLLHPFGFDGIL--TWQFQVLALAKT--YEVYVPDFLF--FGSSV--------TDRPDR 93 (270)
Q Consensus 29 ~~g~~l~~~~~~-~~~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~--~~v~~~d~~g--~G~s~--------~~~~~~ 93 (270)
+|...|.+|.+. +.++.|++|+|||++..... ....--..|+++ +-|+++++|- .|.-+ ......
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 478889999988 55667999999997643331 211223556555 8899999982 12111 111112
Q ss_pred ChHHH---HHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 94 TASFQ---AECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 94 ~~~~~---~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
.+.+. .+++.+-|++++. ++|.|+|+|.||+.++.+.+- ....+.++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 33333 3455556666754 579999999999888766553 1235777788777664
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.1e-05 Score=60.94 Aligned_cols=104 Identities=16% Similarity=0.019 Sum_probs=68.9
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHH-------------------hhccceEEeec-CCCCCCCCC--CCCCCChHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLA-------------------LAKTYEVYVPD-FLFFGSSVT--DRPDRTASFQAE 100 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------l~~~~~v~~~d-~~g~G~s~~--~~~~~~~~~~~~ 100 (270)
.++|.++++.|++|++. .+..+.+. +...-.++.+| .-|.|.|.. .....+.....+
T Consensus 99 ~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 99 ANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 35799999999999988 77655321 11124689999 558999884 223344555555
Q ss_pred HHHHHHHHh-------C--CCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccC
Q 024228 101 CMAKGLRKL-------G--VEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVM 147 (270)
Q Consensus 101 ~~~~~l~~~-------~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~ 147 (270)
|+..+.+.+ . ..+.+|+|.|+||..+..+|..--+ ..++++.+.+..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 555554432 2 2489999999999988888775433 356666665543
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=0.00021 Score=53.34 Aligned_cols=105 Identities=13% Similarity=0.110 Sum_probs=76.0
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
..|.|+++-.+.++.....+...+.|-....|+.-|+-.--.-+-..+.++++++.+-+.+.+..++.+ .++++.|.=+
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 456788887777765534455667777778888888864444444446689999999999999999865 7788887654
Q ss_pred -----HHHHHHHhhCccccccEEEecccCCC
Q 024228 124 -----MVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 124 -----~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.+++..+...|..-..+++++++.+.
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 44555555567778899999887654
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.4e-05 Score=67.47 Aligned_cols=119 Identities=18% Similarity=0.084 Sum_probs=66.1
Q ss_pred ecCCeEEEEEecCCCCC---CceEEEeCCCCCcccc----cHHHHHHHhhcc-ceEEeecCC----CCCCCCCC--C-CC
Q 024228 28 IEPGTILNIWVPKKTTK---KHAVVLLHPFGFDGIL----TWQFQVLALAKT-YEVYVPDFL----FFGSSVTD--R-PD 92 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~~~---~~~vv~~hG~~~~~~~----~~~~~~~~l~~~-~~v~~~d~~----g~G~s~~~--~-~~ 92 (270)
.+|...|.++.+..... .|++|++||++..... .+.. ...+.++ .-||+++|| |+-.+... . ..
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN 183 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGN 183 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBST
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchh
Confidence 44778899998876543 5999999997744331 2222 2334444 999999998 33222211 1 33
Q ss_pred CChHHHH---HHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 93 RTASFQA---ECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 93 ~~~~~~~---~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
..+.+.. +++.+-|..+|. ++|.|+|+|.||..+...+..- ...++++|+.++..
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 3333333 344444555553 4799999999998776655542 34799999998854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00031 Score=55.02 Aligned_cols=59 Identities=15% Similarity=0.216 Sum_probs=47.2
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc-----------------------CC-ceEEEecCCCcceeecchHhHHHHHHH
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG-----------------------QN-ATMESIEKAGHLVNLERPFVYNRQLKT 257 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~ 257 (270)
+++|+..|+.|.+++.--.+.+.+.+. .+ .++..+.+|||+.. .+|+...+.+.+
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~ 312 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQR 312 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHH
Confidence 799999999999998766666655442 12 56677789999996 699999999999
Q ss_pred HHHh
Q 024228 258 ILAS 261 (270)
Q Consensus 258 fl~~ 261 (270)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9964
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.9e-05 Score=55.42 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=65.9
Q ss_pred ceEEEeCCCCCccc-ccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--CCceEEEEEc
Q 024228 46 HAVVLLHPFGFDGI-LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--VEKCTLVGVS 120 (270)
Q Consensus 46 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~G~S 120 (270)
.++|++||++.... .....+.+.+.+. ..++++|. |-| .....-....+.++.+.+.+.... .+-+.++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEEc
Confidence 68999999998877 2366777777776 88888886 344 111111233344444444433221 2458999999
Q ss_pred hhHHHHHHHHhhCcc-ccccEEEecccC
Q 024228 121 YGGMVGFKMAEMYPD-LVESMVVTCSVM 147 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~-~v~~~i~~~~~~ 147 (270)
.||.++-.++..-++ .|+.+|.++++-
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999988887654 488899887653
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00025 Score=54.87 Aligned_cols=53 Identities=17% Similarity=0.217 Sum_probs=41.3
Q ss_pred HHHHHHHHHHH-hCC----CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 98 QAECMAKGLRK-LGV----EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 98 ~~~~~~~~l~~-~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
+.+++-+.+++ ... ++..++||||||.-|+.+|.++|++++.+..+++.....
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 34556644443 321 278999999999999999999999999999988887655
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00019 Score=54.07 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=61.4
Q ss_pred CCCceEEEeCCCCCccc-ccHHHHHHHhhcc----ceEEeecCCCCCCCCC--CCCCCChHHHHHHHHHHHHHh-----C
Q 024228 43 TKKHAVVLLHPFGFDGI-LTWQFQVLALAKT----YEVYVPDFLFFGSSVT--DRPDRTASFQAECMAKGLRKL-----G 110 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~----~~v~~~d~~g~G~s~~--~~~~~~~~~~~~~~~~~l~~~-----~ 110 (270)
.+.|.+++.||-..... ..++.+-..+.+. ..++.+|.-.--.... .........+++++.-.++.. .
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~ 175 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSAD 175 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccccc
Confidence 35688999998432111 1333333444443 5566666531000000 000112223344444444432 1
Q ss_pred CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
...-+|.|.|+||.+++..+..+|+++..++..+|....
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 235789999999999999999999999999988877654
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0015 Score=53.92 Aligned_cols=84 Identities=17% Similarity=0.183 Sum_probs=57.7
Q ss_pred HHHHhhccceEEeecCCCCCCCCC---CCCCCChHHHH-----------HHHHHHHHHh---CCCceEEEEEchhHHHHH
Q 024228 65 QVLALAKTYEVYVPDFLFFGSSVT---DRPDRTASFQA-----------ECMAKGLRKL---GVEKCTLVGVSYGGMVGF 127 (270)
Q Consensus 65 ~~~~l~~~~~v~~~d~~g~G~s~~---~~~~~~~~~~~-----------~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~ 127 (270)
+...+++.|.++.=|- ||..+.. .....+.+.+. .--.++++.+ ..+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4567777799999996 6655532 11113333222 2223344433 345688999999999999
Q ss_pred HHHhhCccccccEEEecccCCC
Q 024228 128 KMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 128 ~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
..|+++|+..++++.-+|....
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHH
Confidence 9999999999999999987654
|
It also includes several bacterial homologues of unknown function. |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.3e-05 Score=44.10 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=25.9
Q ss_pred CceeEEEeecCCeEEEEEec-CCC------CCCceEEEeCCCCCcccccH
Q 024228 20 GMTQRTIEIEPGTILNIWVP-KKT------TKKHAVVLLHPFGFDGILTW 62 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~-~~~------~~~~~vv~~hG~~~~~~~~~ 62 (270)
..+++.|.++||..|..+.. .+. .++|+|++.||+.+++. .|
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 46899999999999976543 222 36789999999999988 77
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00012 Score=57.33 Aligned_cols=101 Identities=20% Similarity=0.187 Sum_probs=76.8
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC---CChHHHHHHHHHHHHHhC---CCceEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD---RTASFQAECMAKGLRKLG---VEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~l~~~~---~~~~~l~ 117 (270)
..|+|+..-|++.............|. -+-+.+++|-+|.|.+.+.+ .++.+-+.|..++++.++ .++-+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 578888888988765422223333443 57888999999999877654 678888889888877764 3577888
Q ss_pred EEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
|.|=||+.++.+=.-+|+.|++.|..-++
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 99999999998878889999998865444
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.3e-05 Score=58.96 Aligned_cols=85 Identities=24% Similarity=0.097 Sum_probs=59.9
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEE
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGV 119 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~ 119 (270)
...-||+.|=|+-.+ .=..+...|.+. +.|+-+|-.-+-.| ..+.++.++|+..+++.. +..++.|+|+
T Consensus 260 d~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~-----~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 260 DTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWS-----ERTPEQIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred ceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhc-----cCCHHHHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 344556666444333 334567888888 99999995433333 357888899999888765 5679999999
Q ss_pred chhHHHHHHHHhhCcc
Q 024228 120 SYGGMVGFKMAEMYPD 135 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~ 135 (270)
|+|+-+.-..-.+.|.
T Consensus 334 SfGADvlP~~~n~L~~ 349 (456)
T COG3946 334 SFGADVLPFAYNRLPP 349 (456)
T ss_pred cccchhhHHHHHhCCH
Confidence 9999877665555553
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0011 Score=49.30 Aligned_cols=53 Identities=17% Similarity=0.242 Sum_probs=41.7
Q ss_pred HHHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc
Q 024228 99 AECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE 151 (270)
Q Consensus 99 ~~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~ 151 (270)
.+.+.-++++ ++.++..++|||+||.+++.....+|+.+...++++|...+..
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n 176 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHN 176 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCC
Confidence 3444445554 2456789999999999999999999999999999998766443
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.1e-05 Score=58.07 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=52.2
Q ss_pred CCceEEEeCCCCCccc--ccHHHHHHHhhcc---ceEEeecCCCCCCCC-CCCC-CCChHHHHHHHHHHHHHhC--CCce
Q 024228 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT---YEVYVPDFLFFGSSV-TDRP-DRTASFQAECMAKGLRKLG--VEKC 114 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~g~G~s~-~~~~-~~~~~~~~~~~~~~l~~~~--~~~~ 114 (270)
+..|||+.||++.+.. ..+..+...+.+. .-|.+++.- -+.+. .... -.+....++.+.+.++... .+-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 4578999999997642 1445544444433 556666652 21110 0000 0233444444555554422 1469
Q ss_pred EEEEEchhHHHHHHHHhhCcc-ccccEEEecccC
Q 024228 115 TLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVM 147 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~ 147 (270)
.++|+|.||.++-.++.+.++ .|+.+|.++++-
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 999999999999999999864 699999998763
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00016 Score=58.14 Aligned_cols=81 Identities=15% Similarity=0.151 Sum_probs=55.7
Q ss_pred cHHHHHHHhhcc-c------eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHH
Q 024228 61 TWQFQVLALAKT-Y------EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 61 ~~~~~~~~l~~~-~------~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a 130 (270)
.|..+++.|.+. | ...-+|+|-. . . ..+.+...+...|+.. ..++++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~---~----~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS---P----A-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc---h----h-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 688888888763 2 2333687721 1 1 2334455555555543 357999999999999999988
Q ss_pred hhCcc------ccccEEEecccCCC
Q 024228 131 EMYPD------LVESMVVTCSVMGL 149 (270)
Q Consensus 131 ~~~p~------~v~~~i~~~~~~~~ 149 (270)
...+. .|+++|.++++...
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCC
Confidence 87743 59999999987653
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00016 Score=56.62 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=73.2
Q ss_pred CceEEEeCCCCCcccccHH---HHHHHhhcc--ceEEeecCCCCCCCCCCC----------CCCChHHHHHHHHHHHHHh
Q 024228 45 KHAVVLLHPFGFDGILTWQ---FQVLALAKT--YEVYVPDFLFFGSSVTDR----------PDRTASFQAECMAKGLRKL 109 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~---~~~~~l~~~--~~v~~~d~~g~G~s~~~~----------~~~~~~~~~~~~~~~l~~~ 109 (270)
+.+|+|.-|.-++-+ .+. .++..++.+ .-++..++|-+|+|.+-. ...+.++...|...++..+
T Consensus 80 ~gPIffYtGNEGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CCceEEEeCCcccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 367889889877665 332 234444444 678899999999987432 1245666677888888777
Q ss_pred CC------CceEEEEEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 110 GV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 110 ~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
+. .+++.+|-|+||+++..+=.++|..+.|.+..+++
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 42 37999999999999999999999977776654443
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0012 Score=47.01 Aligned_cols=129 Identities=23% Similarity=0.285 Sum_probs=73.0
Q ss_pred cCCceeEEEeecCCe---EEEE-EecCC--CCCCceEEEeCCCCCcccccHHH---------------HH-HHhhccceE
Q 024228 18 LVGMTQRTIEIEPGT---ILNI-WVPKK--TTKKHAVVLLHPFGFDGILTWQF---------------QV-LALAKTYEV 75 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~---~l~~-~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---------------~~-~~l~~~~~v 75 (270)
..++.+..|.++ +. ...+ +.... ..+...+|++||.|.-....|.+ ++ +..+..|.|
T Consensus 69 ~c~Lkr~~ip~d-~~e~E~~SFiF~s~~~lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygv 147 (297)
T KOG3967|consen 69 DCNLKRVSIPVD-ATESEPKSFIFMSEDALTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGV 147 (297)
T ss_pred cCCceeEeecCC-CCCCCCcceEEEChhHhcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcE
Confidence 345677777773 42 2222 22222 24567899999988544435533 12 334445888
Q ss_pred EeecCCC---CCCCCCCCC--CCChHHHHHH-HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccC
Q 024228 76 YVPDFLF---FGSSVTDRP--DRTASFQAEC-MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVM 147 (270)
Q Consensus 76 ~~~d~~g---~G~s~~~~~--~~~~~~~~~~-~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~ 147 (270)
+..+.-- +-.+...+. ..+..+.+.- -..++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++.
T Consensus 148 iv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 148 IVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred EEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 8876431 111111111 1222222221 1233333456789999999999999999999985 577777766553
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00018 Score=49.89 Aligned_cols=50 Identities=14% Similarity=-0.037 Sum_probs=35.1
Q ss_pred HHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCC
Q 024228 99 AECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMG 148 (270)
Q Consensus 99 ~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~ 148 (270)
...+...++.. ...+++++|||+||.+|..++..... ++..++.++++..
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 34444444443 56789999999999999998887654 4566777766544
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0012 Score=45.34 Aligned_cols=45 Identities=13% Similarity=0.130 Sum_probs=37.1
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
++++.-..+.++-|.||||+.|+.+.-++|+...++|.+++....
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 344433456788899999999999999999999999999987654
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.032 Score=45.32 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=70.5
Q ss_pred CeEEE-EEecCCCCCCceEEEeCCCCCcccccHHH--HHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 31 GTILN-IWVPKKTTKKHAVVLLHPFGFDGILTWQF--QVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~-~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
+..+. |+.||. -+.|..|.+.|+-. .+ .|+. +++.|.. --.+.=|.|--|.+-......-.....+-|.+.++
T Consensus 275 reEi~yYFnPGD-~KPPL~VYFSGyR~-aE-GFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~ 350 (511)
T TIGR03712 275 RQEFIYYFNPGD-FKPPLNVYFSGYRP-AE-GFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLD 350 (511)
T ss_pred CCeeEEecCCcC-CCCCeEEeeccCcc-cC-cchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHHHHHHHHHHH
Confidence 44444 444554 45677888998876 34 4443 3455543 33444577766655433333234455666777788
Q ss_pred HhCCC--ceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 108 KLGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 108 ~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.|+.+ .++|-|-|||..-|+.++++.. ..++|+--|...
T Consensus 351 ~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 351 YLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 88765 6999999999999999999863 456666555443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00041 Score=47.28 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
...+.+..+++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3345555655555656899999999999999888763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0015 Score=52.68 Aligned_cols=105 Identities=19% Similarity=0.213 Sum_probs=78.0
Q ss_pred CCCceEEEeCCCCCcccccHHH----HHHHhhcc--ceEEeecCCCCCCCCCCCCC-------CChHHHHHHHHHHHHHh
Q 024228 43 TKKHAVVLLHPFGFDGILTWQF----QVLALAKT--YEVYVPDFLFFGSSVTDRPD-------RTASFQAECMAKGLRKL 109 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~--~~v~~~d~~g~G~s~~~~~~-------~~~~~~~~~~~~~l~~~ 109 (270)
+++|..|+|-|=+.... .|.. ....++++ ..|+.+++|-+|.|.+.... .+.++...|+.++|+++
T Consensus 84 ~~gPiFLmIGGEgp~~~-~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESD-KWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCCC-CccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 56788888888665554 4422 12334444 78999999999988643311 46677788999999887
Q ss_pred CC-------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 110 GV-------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 110 ~~-------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.. .+.+.+|-|+-|.++..+=.++|+.+-+.|..+++..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 32 2789999999999999999999999988888776653
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.019 Score=42.49 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=54.5
Q ss_pred eEEEeCCCC--CcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHH----HHHHHHh----CC----
Q 024228 47 AVVLLHPFG--FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM----AKGLRKL----GV---- 111 (270)
Q Consensus 47 ~vv~~hG~~--~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~----~~~l~~~----~~---- 111 (270)
.|=|+-|.. ....-.|+.+.+.|+++ |.|++.-+.- | ++-...+..+ ...++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 344555532 23335888999999988 9999976641 1 1222222222 2222222 11
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
-+++-+|||+|+-+-+.+...++..-++-++++-
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2677899999999988888877655567777763
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00069 Score=52.34 Aligned_cols=149 Identities=14% Similarity=0.060 Sum_probs=88.1
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc-----------chhhhhhccccc
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG-----------YESWVDFLLPKT 174 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 174 (270)
+..+.++.+.+-|-|--|+.++..|...| +|.++|-...-.--.........+..+ .....+.+....
T Consensus 228 L~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~ 306 (507)
T COG4287 228 LEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPL 306 (507)
T ss_pred hhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHH
Confidence 34456778999999999999999888877 477776433211111111111111111 011111112222
Q ss_pred HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHH
Q 024228 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 254 (270)
...+.+......+... ....++..|-.++.+..|.+.++..+.-+...+|+...+..+|+..|.... ..+.+.
T Consensus 307 fkqL~~IiDPlay~~t----ry~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n---~~i~es 379 (507)
T COG4287 307 FKQLLEIIDPLAYRNT----RYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN---QFIKES 379 (507)
T ss_pred HHHHHHhhcHHHHhhh----hhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH---HHHHHH
Confidence 2333333333333221 112334489999999999999999999999999977889999999998743 334445
Q ss_pred HHHHHHhh
Q 024228 255 LKTILASL 262 (270)
Q Consensus 255 i~~fl~~~ 262 (270)
+..|+.+.
T Consensus 380 l~~flnrf 387 (507)
T COG4287 380 LEPFLNRF 387 (507)
T ss_pred HHHHHHHH
Confidence 55555443
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.051 Score=42.69 Aligned_cols=222 Identities=10% Similarity=0.028 Sum_probs=114.8
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhC--CCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLG--VEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~--~~~~~l~G~ 119 (270)
+..+||++=||.+..+...........+. +.++.+-.|-+-..-... ...+......-+.+++.... ..++++--+
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 34466666677776662223334444444 888888777543332222 22344444456666666655 457888899
Q ss_pred chhHHHHHHHH---hh-C-c---cccccEEEecccCCCCchhh----------hHhhhhcc-chhhh-hhccccc---HH
Q 024228 120 SYGGMVGFKMA---EM-Y-P---DLVESMVVTCSVMGLTESVS----------NAALERIG-YESWV-DFLLPKT---AD 176 (270)
Q Consensus 120 S~Gg~~a~~~a---~~-~-p---~~v~~~i~~~~~~~~~~~~~----------~~~~~~~~-~~~~~-~~~~~~~---~~ 176 (270)
|+||...+... .. . | +...++++.+.+........ ......+. ..... ....... ..
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 196 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEGGAY 196 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeecccchh
Confidence 99986655433 11 1 2 24566776655443211110 00000000 00000 0000000 00
Q ss_pred HHHHHHHhhhhcC--CCCh--hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cch
Q 024228 177 ALKVQFDIACYKL--PTLP--AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERP 248 (270)
Q Consensus 177 ~~~~~~~~~~~~~--~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~ 248 (270)
.+...+....... .... .........+.+.+.+..|.++|.+..+++.+... .+.+.+-+.++-|..+. ..|
T Consensus 197 ~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p 276 (350)
T KOG2521|consen 197 LLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFP 276 (350)
T ss_pred hhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCc
Confidence 0000000000000 0000 00111112788999999999999999888855543 24555666788999977 689
Q ss_pred HhHHHHHHHHHHhhhhh
Q 024228 249 FVYNRQLKTILASLVHA 265 (270)
Q Consensus 249 ~~~~~~i~~fl~~~~~~ 265 (270)
..+.+...+|++.....
T Consensus 277 ~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 277 KTYLKKCSEFLRSVISS 293 (350)
T ss_pred HHHHHHHHHHHHhcccc
Confidence 99999999999887543
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.047 Score=38.61 Aligned_cols=53 Identities=28% Similarity=0.113 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 96 SFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+.-+.+|..+++.+. ..++.++|||+|+.++-.++...+..+..+|+++++..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 344566777766653 33789999999999999888886678999999987654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0016 Score=48.06 Aligned_cols=47 Identities=19% Similarity=0.048 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc----cccccEEEecccCC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP----DLVESMVVTCSVMG 148 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~i~~~~~~~ 148 (270)
-+..+++..+ +++.+.|||.||.+|..++...+ ++|.++...+++..
T Consensus 74 yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 74 YLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3444444444 36999999999999999888743 47888888777654
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0053 Score=52.16 Aligned_cols=118 Identities=18% Similarity=0.157 Sum_probs=69.0
Q ss_pred cCCeEEEEEecCCCCC--CceEEEeCCCCCcccc--cHH--HHHHHhhcc-ceEEeecCC----CC---CCCCCCCCCCC
Q 024228 29 EPGTILNIWVPKKTTK--KHAVVLLHPFGFDGIL--TWQ--FQVLALAKT-YEVYVPDFL----FF---GSSVTDRPDRT 94 (270)
Q Consensus 29 ~~g~~l~~~~~~~~~~--~~~vv~~hG~~~~~~~--~~~--~~~~~l~~~-~~v~~~d~~----g~---G~s~~~~~~~~ 94 (270)
+|...+.++.+..... -|++|++||++..... .+. .....+..+ .-|+.+.+| |+ |.+. .+....
T Consensus 94 EDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~-~~gN~g 172 (545)
T KOG1516|consen 94 EDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSA-APGNLG 172 (545)
T ss_pred CCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCC-CCCccc
Confidence 3777888888776433 6999999998754331 221 112223333 778888887 22 2222 233344
Q ss_pred hHHHHHH---HHHHHHHhC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 95 ASFQAEC---MAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 95 ~~~~~~~---~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
+.++... +..-|...+ .++|.|+|||.||..+..+...- ...+.++|..++..
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 4444333 334444444 45899999999999887655421 23566666666554
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00082 Score=53.78 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=51.2
Q ss_pred cHHHHHHHhhcc-ce------EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 61 TWQFQVLALAKT-YE------VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~------v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.|..+++.|..- |. -..+|+|-.- ......+..+..+..-++...+.-+.++++|++||||+.+.+.+....
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~-~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSY-HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhcc-CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 667777777643 43 4566777211 111111223333333444444444668999999999999999998887
Q ss_pred cc--------ccccEEEeccc
Q 024228 134 PD--------LVESMVVTCSV 146 (270)
Q Consensus 134 p~--------~v~~~i~~~~~ 146 (270)
++ .|++++-++++
T Consensus 204 ~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 204 EAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred cccchhHHHHHHHHHHccCch
Confidence 65 36666666554
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.032 Score=50.31 Aligned_cols=96 Identities=17% Similarity=0.211 Sum_probs=66.2
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCC-CCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEc
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSS-VTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVS 120 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S 120 (270)
...|+++|+|.+-+... .+..++..|. + |.+|.- ....+..+++..+.-...-++++.. .+..++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle--~-------PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE--I-------PAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC--C-------cchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 45799999999888776 6665555443 2 333322 2233446777777777777777654 589999999
Q ss_pred hhHHHHHHHHhhCc--cccccEEEecccCC
Q 024228 121 YGGMVGFKMAEMYP--DLVESMVVTCSVMG 148 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~ 148 (270)
+|+.++..+|.... +....+|++++.+.
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 99999999887542 23566888887654
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0037 Score=52.01 Aligned_cols=84 Identities=14% Similarity=0.193 Sum_probs=52.5
Q ss_pred cHHHHHHHhhcc-ce-----EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHH
Q 024228 61 TWQFQVLALAKT-YE-----VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~-----v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a 130 (270)
.|..+++.|++. |. ...+|+|- +.. .....+.+...+...|+.. +.++++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRl---s~~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRL---SFQ--NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeeccccccc---Ccc--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 668888888876 54 33344441 110 0112244445555555533 357999999999999999876
Q ss_pred hhCc---------------cccccEEEecccCCC
Q 024228 131 EMYP---------------DLVESMVVTCSVMGL 149 (270)
Q Consensus 131 ~~~p---------------~~v~~~i~~~~~~~~ 149 (270)
.... ..|++.|.++++...
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 6321 248899999887543
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0093 Score=40.59 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=51.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccc-eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTY-EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
...||++-|++..+. .+..+. +.+++ -++++|++... -+.++. ..+.+.|+++|||-
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi--lpeN~dl~lcYDY~dl~------ldfDfs-------------Ay~hirlvAwSMGV 68 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI--LPENHDLLLCYDYQDLN------LDFDFS-------------AYRHIRLVAWSMGV 68 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc--CCCCCcEEEEeehhhcC------cccchh-------------hhhhhhhhhhhHHH
Confidence 347888899988877 544332 33443 56888987321 111211 12467899999999
Q ss_pred HHHHHHHhhCccccccEEEecccC
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVM 147 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~ 147 (270)
.+|-++....+ ++..+.+++..
T Consensus 69 wvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCC
Confidence 99999888764 67767766543
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0016 Score=48.57 Aligned_cols=24 Identities=25% Similarity=0.171 Sum_probs=20.2
Q ss_pred CCCceEEEEEchhHHHHHHHHhhC
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 456899999999999998887753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0043 Score=50.08 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
+.+.+.+.+.+....++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3445555665555568999999999999988765
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0054 Score=49.68 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
.+.+.+.++++.....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 44566777777776678999999999999998875
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0039 Score=49.84 Aligned_cols=37 Identities=19% Similarity=0.086 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhh
Q 024228 96 SFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+++..++..+++....+ ++++.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44566677777666433 68999999999999988864
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.009 Score=38.66 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=27.2
Q ss_pred ccCCceeEEEeecCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHH
Q 024228 17 KLVGMTQRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQ 65 (270)
Q Consensus 17 ~~~~~~~~~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~ 65 (270)
....+..-...+ +|..||+....+ .++..+||++||++++-. .|..+
T Consensus 64 ~lN~~phf~t~I-~g~~iHFih~rs~~~~aiPLll~HGWPgSf~-Ef~~v 111 (112)
T PF06441_consen 64 RLNSFPHFKTEI-DGLDIHFIHVRSKRPNAIPLLLLHGWPGSFL-EFLKV 111 (112)
T ss_dssp HHTTS-EEEEEE-TTEEEEEEEE--S-TT-EEEEEE--SS--GG-GGHHH
T ss_pred HHHcCCCeeEEE-eeEEEEEEEeeCCCCCCeEEEEECCCCccHH-hHHhh
Confidence 334555666667 699999865544 345679999999999877 55543
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0045 Score=49.44 Aligned_cols=33 Identities=21% Similarity=0.114 Sum_probs=23.4
Q ss_pred HHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhh
Q 024228 100 ECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 100 ~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (270)
..+..+++..... ++++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444444433 49999999999999998864
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0069 Score=47.74 Aligned_cols=36 Identities=28% Similarity=0.234 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhC
Q 024228 98 QAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
+.+.+..+++..+.+ ++++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445566666665533 589999999999999888753
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.012 Score=41.96 Aligned_cols=74 Identities=14% Similarity=0.027 Sum_probs=42.5
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH----HhCCCceEEEEEchhHHHHHHHHhh--C----ccccccEEE
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR----KLGVEKCTLVGVSYGGMVGFKMAEM--Y----PDLVESMVV 142 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~l~G~S~Gg~~a~~~a~~--~----p~~v~~~i~ 142 (270)
..+..++||-..... ....+...-+.++...++ .-...+++|+|+|.||.++..++.. . .++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 667777887432221 011122223344444443 3355689999999999999999877 2 357889888
Q ss_pred ecccCC
Q 024228 143 TCSVMG 148 (270)
Q Consensus 143 ~~~~~~ 148 (270)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 875543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0074 Score=47.62 Aligned_cols=87 Identities=24% Similarity=0.194 Sum_probs=50.2
Q ss_pred CCCceEEEeCCCCC-cccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC---CChHHHHHHHHHHHHHhCCCceEEEE
Q 024228 43 TKKHAVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD---RTASFQAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 43 ~~~~~vv~~hG~~~-~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~l~G 118 (270)
+++-.+|+.||+.+ +.. +|...+....+.+.=..+..+|.-..-....+ .--...++++.+.+....++++-++|
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvg 156 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVG 156 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeee
Confidence 34568999999988 444 77666666665522213333333222111111 11122345555555555578999999
Q ss_pred EchhHHHHHHHH
Q 024228 119 VSYGGMVGFKMA 130 (270)
Q Consensus 119 ~S~Gg~~a~~~a 130 (270)
||+||.++..+.
T Consensus 157 hSLGGLvar~AI 168 (405)
T KOG4372|consen 157 HSLGGLVARYAI 168 (405)
T ss_pred eecCCeeeeEEE
Confidence 999998876443
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.037 Score=42.38 Aligned_cols=125 Identities=14% Similarity=0.055 Sum_probs=80.8
Q ss_pred EEeecCCeEEEEEecC----CCCCCceEEEeCCCCCccc---ccHHHHHHH----------hhccceEEeecCC-CCCCC
Q 024228 25 TIEIEPGTILNIWVPK----KTTKKHAVVLLHPFGFDGI---LTWQFQVLA----------LAKTYEVYVPDFL-FFGSS 86 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~----~~~~~~~vv~~hG~~~~~~---~~~~~~~~~----------l~~~~~v~~~d~~-g~G~s 86 (270)
++++.++..+.+|..- .....|..+.+.|.++.+. ..|+.+-+. .-+...++.+|-| |.|.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfS 86 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFS 86 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCcee
Confidence 4555567666654432 2245788889999877655 233333211 1223567788876 77777
Q ss_pred CCCCCC---CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhCcc---------ccccEEEecccC
Q 024228 87 VTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMYPD---------LVESMVVTCSVM 147 (270)
Q Consensus 87 ~~~~~~---~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p~---------~v~~~i~~~~~~ 147 (270)
-..... .+.++.+.|+.++++.+ ...+++++..|+||-+|...+...-+ .+.++++-+++.
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 543322 56778899999999875 34589999999999999888765322 355667766665
Q ss_pred CC
Q 024228 148 GL 149 (270)
Q Consensus 148 ~~ 149 (270)
.+
T Consensus 167 SP 168 (414)
T KOG1283|consen 167 SP 168 (414)
T ss_pred Ch
Confidence 43
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.013 Score=42.35 Aligned_cols=67 Identities=16% Similarity=0.071 Sum_probs=41.6
Q ss_pred HHhhccceEEeecCCCCCCCCCC-----CC----CCChHHHHHHHHHHHHHhCC-CceEEEEEchhHHHHHHHHhhC
Q 024228 67 LALAKTYEVYVPDFLFFGSSVTD-----RP----DRTASFQAECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 67 ~~l~~~~~v~~~d~~g~G~s~~~-----~~----~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
..+....+|+++=||=-...... .. .....+..+....+|++.+. ++++|+|||.|+.+..++..+.
T Consensus 40 s~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34544588888887732111111 11 12333444455566666654 4899999999999999998875
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.012 Score=48.14 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
.....+..+++.....++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34556667777766678999999999999998874
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.022 Score=45.61 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhh
Q 024228 96 SFQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+++.+.+..+++.+. ..++.+.|||+||.+|..+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666553 1378999999999999988754
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.012 Score=47.00 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhh
Q 024228 98 QAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.+.+..+++....+ +|++.|||+||.+|..+|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 445566666665432 69999999999999988864
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.031 Score=43.96 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=31.9
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCC
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLT 150 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~ 150 (270)
+.+|+.|+|||+|+.+...+.....+ .|+.+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 55689999999999998877665443 388999998776543
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.017 Score=47.24 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhC
Q 024228 97 FQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
++.+.+..+++....+ +|++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3445556666655432 689999999999999887653
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.021 Score=46.99 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCC-----CceEEEEEchhHHHHHHHHhh
Q 024228 97 FQAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
++...+..+++..+. -++.+.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344455566665532 379999999999999988753
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.024 Score=46.55 Aligned_cols=36 Identities=19% Similarity=0.114 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhh
Q 024228 97 FQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 97 ~~~~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+..+++..+++.+. ..++.+.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566677776653 1269999999999999988754
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.027 Score=46.25 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC-----CceEEEEEchhHHHHHHHHhh
Q 024228 98 QAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 98 ~~~~~~~~l~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+...+..+++.... .++.+.|||+||.+|..+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44455555555432 279999999999999988754
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.028 Score=46.29 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHh
Q 024228 97 FQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 97 ~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
++...|..+++... .-++.+.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34555666666552 126999999999999998875
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.034 Score=44.00 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5667788888888886789999999999999988765
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.045 Score=38.88 Aligned_cols=60 Identities=10% Similarity=0.060 Sum_probs=46.4
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHh---c-CCceEEEecCCCcceeecch---HhHHHHHHHHHHh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQV---G-QNATMESIEKAGHLVNLERP---FVYNRQLKTILAS 261 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 261 (270)
+++|-|-|+.|.+..+.+.......+ + .....++.+|+||+..+.-+ +++...|.+|+.+
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 78888999999999887766555543 3 23567788999999987543 6788889999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.18 Score=40.27 Aligned_cols=22 Identities=27% Similarity=0.422 Sum_probs=17.6
Q ss_pred CCceEEEEEchhHHHHHHHHhh
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.++++|.|.|.||.-++..+..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred cceEEEeccChHHHHHHHHHHH
Confidence 4579999999999888775543
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.021 Score=47.30 Aligned_cols=110 Identities=17% Similarity=0.191 Sum_probs=59.4
Q ss_pred EEEEecCCCCCCceEEEeCCCCCccc--ccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH--
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGI--LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR-- 107 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~-- 107 (270)
+..|....+.++-.|+-+||+|.-.. ..-+...+.+++. ..|+.+||----+.+.+ ...++..-....+|.
T Consensus 385 ~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFP---RaleEv~fAYcW~inn~ 461 (880)
T KOG4388|consen 385 LELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFP---RALEEVFFAYCWAINNC 461 (880)
T ss_pred cccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCC---cHHHHHHHHHHHHhcCH
Confidence 33444443345667888999884322 1222333334433 78999998633332222 223333222222332
Q ss_pred -HhC--CCceEEEEEchhHHHHHHHHhh----CccccccEEEeccc
Q 024228 108 -KLG--VEKCTLVGVSYGGMVGFKMAEM----YPDLVESMVVTCSV 146 (270)
Q Consensus 108 -~~~--~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~i~~~~~ 146 (270)
.++ .++|+++|-|.||.++...|.+ .-..-+++++..++
T Consensus 462 allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 462 ALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred HHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 233 4799999999999876555443 22224677766554
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.089 Score=44.15 Aligned_cols=24 Identities=25% Similarity=0.221 Sum_probs=19.3
Q ss_pred hCCCceEEEEEchhHHHHHHHHhh
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
...-+++++|||+||.+|..++..
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHH
Confidence 333489999999999999887664
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.6 Score=29.61 Aligned_cols=82 Identities=16% Similarity=0.175 Sum_probs=55.8
Q ss_pred cHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh-HHHHHHHHHHHHHhCCCceEEEEEchhH--HHHHHHHhhCccc
Q 024228 61 TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA-SFQAECMAKGLRKLGVEKCTLVGVSYGG--MVGFKMAEMYPDL 136 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~l~G~S~Gg--~~a~~~a~~~p~~ 136 (270)
.|..+.+.+..+ +..=.+.++..|.+......... +.-...+..+++.+...+++++|-|--. -+-..+|.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 555566777665 66666666666554322211122 3456778889999998999999999654 4555678899999
Q ss_pred cccEEE
Q 024228 137 VESMVV 142 (270)
Q Consensus 137 v~~~i~ 142 (270)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 998754
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.26 Score=37.29 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=27.9
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
.+.+.....++.|.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3334445568999999999999998888774 444444443
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.26 Score=37.29 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=27.9
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
.+.+.....++.|.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3334445568999999999999998888774 444444443
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=92.01 E-value=0.99 Score=33.53 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=37.4
Q ss_pred ceEEeecCCCC-CC---CCCCCCCCChHHHHHHHHHHHHHh--CCCceEEEEEchhHHHHHHHHhhC
Q 024228 73 YEVYVPDFLFF-GS---SVTDRPDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 73 ~~v~~~d~~g~-G~---s~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
+.+..+++|.. +- -.....+.+..+=++.+.+.++.. ..++++++|+|+|+.++..++.+.
T Consensus 3 ~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 3 YNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred cceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 45566677651 11 011122345555556666666652 346899999999999998877654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.04 E-value=0.67 Score=39.02 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhC---CCceEEEEEchhHHHHHHHHhh-----Ccc------ccccEEEecccC
Q 024228 99 AECMAKGLRKLG---VEKCTLVGVSYGGMVGFKMAEM-----YPD------LVESMVVTCSVM 147 (270)
Q Consensus 99 ~~~~~~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~i~~~~~~ 147 (270)
...+.+.+.+.+ ..+++.+||||||.++=.+... .|+ .-.++|+++.+.
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 334444444433 3479999999999888665543 232 256778777653
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=89.13 E-value=1.8 Score=35.83 Aligned_cols=116 Identities=15% Similarity=0.124 Sum_probs=61.8
Q ss_pred CCeEEEEEecCCC-CCCceEEEeCCCCCccc----ccHHHHHHHhhcc--ceEEeecCC----C---CCCCCCCCCCCCh
Q 024228 30 PGTILNIWVPKKT-TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT--YEVYVPDFL----F---FGSSVTDRPDRTA 95 (270)
Q Consensus 30 ~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~--~~v~~~d~~----g---~G~s~~~~~~~~~ 95 (270)
|..-+.+|.+... .+..++|++-|+|.-++ ..|+ .+.|+.. .-|+.+++| | .+..+..++...+
T Consensus 119 DCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl 196 (601)
T KOG4389|consen 119 DCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL 196 (601)
T ss_pred hceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch
Confidence 5667788888543 34557778888764333 1222 2445444 667777776 1 1122222233222
Q ss_pred HH---HHHHHHHHHHHhC--CCceEEEEEchhHHHH-HHHHh-hCccccccEEEecccC
Q 024228 96 SF---QAECMAKGLRKLG--VEKCTLVGVSYGGMVG-FKMAE-MYPDLVESMVVTCSVM 147 (270)
Q Consensus 96 ~~---~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a-~~~a~-~~p~~v~~~i~~~~~~ 147 (270)
-+ ....+.+-|...| .+++.|+|.|.|+.-. +.+.+ .....++..|+-++..
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 22 2345555566665 4579999999997543 22221 1123466666655443
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.58 E-value=0.83 Score=37.77 Aligned_cols=44 Identities=23% Similarity=0.276 Sum_probs=33.3
Q ss_pred hCCCceEEEEEchhHHHHHHHHhhC-----ccccccEEEecccCCCCch
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEMY-----PDLVESMVVTCSVMGLTES 152 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~i~~~~~~~~~~~ 152 (270)
.|.+|+.|+|+|.|+.+........ -+.|..+++++++......
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 4678999999999999887655422 2358999999988765543
|
|
| >COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.09 E-value=9.6 Score=30.63 Aligned_cols=89 Identities=19% Similarity=0.128 Sum_probs=57.8
Q ss_pred CCceEEEeCCCCCccc------ccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGI------LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~------~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 117 (270)
+...||++||-..++. ..|..++..+.++=-+-.+|.-..|..++ .++-+.-++.++... +-.++
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G------leeDa~~lR~~a~~~---~~~lv 240 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG------LEEDAYALRLFAEVG---PELLV 240 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc------hHHHHHHHHHHHHhC---CcEEE
Confidence 4557999998665443 48999998888874455556544444332 344444455544432 33888
Q ss_pred EEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
..|+.=.+++ |.+||.++.+++..
T Consensus 241 a~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 241 ASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred Eehhhhhhhh-----hhhccceeEEEeCC
Confidence 8888776665 56889999988653
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.61 E-value=7.1 Score=42.17 Aligned_cols=97 Identities=14% Similarity=-0.044 Sum_probs=66.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEchhH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGG 123 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg 123 (270)
.+.+++.|...+... .+..+...+.....++.+..++.-... ....+++.++....+.+.... ..+..+.|+|+||
T Consensus 3692 ~~~l~~~h~~~r~~~-~~~~l~~~l~~~~~~~~l~~~~~~~d~--~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DYEPLAVILEGDRHVLGLTCRHLLDDG--WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred ccceeeechhhcchh-hhHHHHHHhCCCCcEEEEecccccccc--CCccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 456999999998887 788888888777777877766442221 123456666666666666653 3578999999999
Q ss_pred HHHHHHHhhC---ccccccEEEec
Q 024228 124 MVGFKMAEMY---PDLVESMVVTC 144 (270)
Q Consensus 124 ~~a~~~a~~~---p~~v~~~i~~~ 144 (270)
.++..++... .+.+.-+.++.
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEe
Confidence 9998877643 34455444443
|
|
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=83.34 E-value=16 Score=28.23 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=20.4
Q ss_pred HHhC-CCceEEEEEchhHHHHHHHHhh
Q 024228 107 RKLG-VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 107 ~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.+. .+++.++|+|-|+..|-.+|..
T Consensus 86 ~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 86 KNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred hccCCcceEEEEecCccHHHHHHHHHH
Confidence 4443 4579999999999999888764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 270 | ||||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 6e-06 | ||
| 3bdi_A | 207 | Crystal Structure Of Predicted Cib-Like Hydrolase ( | 2e-05 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 3e-05 | ||
| 2xt0_A | 297 | Dehalogenase Dppa From Plesiocystis Pacifica Sir-I | 4e-05 | ||
| 3ans_A | 336 | Human Soluble Epoxide Hydrolase In Complex With A S | 5e-05 | ||
| 3pdc_A | 344 | Crystal Structure Of Hydrolase Domain Of Human Solu | 5e-05 | ||
| 1s8o_A | 555 | Human Soluble Epoxide Hydrolase Length = 555 | 7e-05 | ||
| 4dnp_A | 269 | Crystal Structure Of Dad2 Length = 269 | 1e-04 | ||
| 4dnq_A | 269 | Crystal Structure Of Dad2 S96a Mutant Length = 269 | 2e-04 | ||
| 3w04_A | 266 | Crystal Structure Of Oryza Sativa Dwarf14 (d14) Len | 4e-04 | ||
| 4iha_A | 268 | Crystal Structure Of Rice Dwarf14 (d14) In Complex | 4e-04 | ||
| 3b12_A | 304 | Crystal Structure Of The Fluoroacetate Dehalogenase | 5e-04 | ||
| 4g8c_A | 279 | Crystal Structures Of N-acyl Homoserine Lactonase A | 6e-04 | ||
| 1y37_A | 304 | Structure Of Fluoroacetate Dehalogenase From Burkho | 6e-04 | ||
| 4g5x_A | 279 | Crystal Structures Of N-acyl Homoserine Lactonase A | 6e-04 |
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase (Np_393672.1) From Thermoplasma Acidophilum At 1.45 A Resolution Length = 207 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I Length = 297 | Back alignment and structure |
|
| >pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A Synthetic Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor Length = 344 | Back alignment and structure |
|
| >pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase Length = 555 | Back alignment and structure |
|
| >pdb|4DNP|A Chain A, Crystal Structure Of Dad2 Length = 269 | Back alignment and structure |
|
| >pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3W04|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14) Length = 266 | Back alignment and structure |
|
| >pdb|4IHA|A Chain A, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A Gr24 Hydrolysis Intermediate Length = 268 | Back alignment and structure |
|
| >pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104 Mutant From Burkholderia Sp. Fa1 In Complex With Fluoroacetate Length = 304 | Back alignment and structure |
|
| >pdb|4G8C|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh E219g Mutant Complexed With N-hexanoyl Homoserine Length = 279 | Back alignment and structure |
|
| >pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia Sp. Fa1 Length = 304 | Back alignment and structure |
|
| >pdb|4G5X|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh Length = 279 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-35
Identities = 43/240 (17%), Positives = 82/240 (34%), Gaps = 27/240 (11%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFG-SSVTDRPDRTASFQAECMAKG 105
+VLLH F W + + Y Y D + S+ + T + A +
Sbjct: 69 PLVLLHGALFSS-TMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDV 127
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---- 161
LG+EK ++G+S GG+ P+ V+S + + +
Sbjct: 128 FDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTA 187
Query: 162 --GYESWVDFLLPKTA-----------DALKVQFDIACYK--LPTLPAFVYKHILEKIH- 205
G E+++++++ + Q P L
Sbjct: 188 SNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARV 247
Query: 206 ---LLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261
LL GE++ I+D V + E I+ AGH++++E+P N ++ +
Sbjct: 248 PILLLLGEHEVIYDPHSALHRASSFV-PDIEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-34
Identities = 48/258 (18%), Positives = 89/258 (34%), Gaps = 47/258 (18%)
Query: 47 AVVLLHPFGFD--GILTWQFQVLALAKTYEVYVPDFLFFGSS-----VTDRPDRTASFQA 99
AVVLLH G W+ + LA+ + V PD + FG S +
Sbjct: 31 AVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRV 90
Query: 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159
E + + G+EK +VG S GG V ++ P+ + + + S +G + L
Sbjct: 91 EQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGS-VGAPMNARPPELA 149
Query: 160 RI----------GYESWVDFLL----------------------PKTADALKVQFDIACY 187
R+ Y + + P+ +V F+
Sbjct: 150 RLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKA 209
Query: 188 KLPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243
+ +L L ++ + G D+I + + L + + ++A + +++ GH
Sbjct: 210 GMESLVIPPAT--LGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWA 266
Query: 244 NLERPFVYNRQLKTILAS 261
LER L +
Sbjct: 267 QLERWDAMGPMLMEHFRA 284
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 7e-34
Identities = 49/250 (19%), Positives = 89/250 (35%), Gaps = 34/250 (13%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQ--AECMAK 104
VVL+ G G W Q+ L + Y+V D G++ D S A + +
Sbjct: 17 VVVLISGLGGSG-SYWLPQLAVLEQEYQVVCYDQRGTGNN-PDTLAEDYSIAQMAAELHQ 74
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI--- 161
L G+E +VG + G +VG ++A YP V ++ + + R
Sbjct: 75 ALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLL 134
Query: 162 ---GYESWVDFLLP---------KTADALKVQFDIACYKLPTLPAFV----------YKH 199
G ++WV+ A L+ + +A + + H
Sbjct: 135 YSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSH 194
Query: 200 ILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQL 255
++I ++ +D + + L + ++ + GH N+ P +N L
Sbjct: 195 HADRIRCPVQIICASDDLLVPTACSSELHAAL-PDSQKMVMPYGGHACNVTDPETFNALL 253
Query: 256 KTILASLVHA 265
LASL+H
Sbjct: 254 LNGLASLLHH 263
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 4e-32
Identities = 46/256 (17%), Positives = 85/256 (33%), Gaps = 47/256 (18%)
Query: 47 AVVLLHPFGFD--GILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR---TASFQAEC 101
VVLLH G + + LA+ + V D +G S D+ + A
Sbjct: 38 TVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHS--DKRAEHGQFNRYAAMA 95
Query: 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161
+ +LG+ + LVG + GG + A YP +V+ GL+ ++ A
Sbjct: 96 LKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGP-GGLSINL-FAPDPTE 153
Query: 162 GYESWVDFLLPKTADALKVQFDIACY---------------------------------K 188
G + F + T + L+ + Y
Sbjct: 154 GVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFA 213
Query: 189 LPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVN 244
A + + ++ L+WG D++ + A + + A + + GH V
Sbjct: 214 GADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTI-PRAQLHVFGQCGHWVQ 272
Query: 245 LERPFVYNRQLKTILA 260
+E+ +N+ L
Sbjct: 273 VEKFDEFNKLTIEFLG 288
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 4e-32
Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 39/250 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFG-SSVTDRPDRTASFQAECMAKG 105
+V LH F D T+ + Y V D G + + + +
Sbjct: 18 VLVFLHGFLSDS-RTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRI 76
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-------- 157
L K + TL G S GG V A + ++++ + G+ E +
Sbjct: 77 LDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDAR 136
Query: 158 ---LERIGYESWVDFLLPK--TADALKVQFDI------------------ACYKLPTLPA 194
L+ G E +V+ L++ +I A T
Sbjct: 137 AKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQM 196
Query: 195 FVYKHILEKI----HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 250
L++I +L GE D+ F +Q+A+ + + N+ + I GH +++E
Sbjct: 197 PNLWPRLKEIKVPTLILAGEYDEKF-VQIAKKMANLI-PNSKCKLISATGHTIHVEDSDE 254
Query: 251 YNRQLKTILA 260
++ + L
Sbjct: 255 FDTMILGFLK 264
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 5e-32
Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 34/249 (13%)
Query: 46 HAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103
++ LH D + L+ Y+ D G+S P + + +
Sbjct: 22 TPIIFLHGLSLDK-QSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIE 80
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG--------------L 149
+G + L G SYGG + +A D + +TC V+ L
Sbjct: 81 AIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINIL 140
Query: 150 TESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYK----------H 199
E ++ + + ++ Q I F+ +
Sbjct: 141 EEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEE 200
Query: 200 ILEKIH------LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253
L+ I+ ++ G ND++ Q L +N + + + GH + +++
Sbjct: 201 KLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHN-ENGEIVLLNRTGHNLMIDQREAVGF 259
Query: 254 QLKTILASL 262
L L
Sbjct: 260 HFDLFLDEL 268
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 7e-32
Identities = 48/255 (18%), Positives = 93/255 (36%), Gaps = 27/255 (10%)
Query: 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK-TYEVYVPD 79
+T + + G + + HAV+LL G + Q+ L K + V D
Sbjct: 2 VTSAKVAVN-GV--QLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWD 58
Query: 80 FLFFG-SSVTDRPDRTASFQ--AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDL 136
+G S DR F+ A+ ++ L +K +L+G S GG+ A YP
Sbjct: 59 PRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSY 118
Query: 137 VESMVVTCSVMGLTESVSNAALERIGYESWVDFL------------LPKTADALKVQFDI 184
+ MV+ + +T+ S W + +T + V
Sbjct: 119 IHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKW-VDGIR 177
Query: 185 ACYKLPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240
LP + +H+L ++ ++ GE D + A + + V + + + + +
Sbjct: 178 QFKHLPD--GNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPEGK 234
Query: 241 HLVNLERPFVYNRQL 255
H ++L +N+
Sbjct: 235 HNLHLRFADEFNKLA 249
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 2e-31
Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 39/244 (15%)
Query: 47 AVVLLH--PFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR---TASFQAEC 101
V+L+H G W+ + AL+K Y V PD + FG + DRP+ + +
Sbjct: 27 PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFT--DRPENYNYSKDSWVDH 84
Query: 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS-------------VMG 148
+ + L +EK +VG ++GG + A Y + V+ MV+ + V G
Sbjct: 85 IIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWG 144
Query: 149 LTESVSN--AALERIGY-ESWVD----------FLLPKTADALKVQFDIACYKLPTLPAF 195
T S+ N L+ Y S V + P ++ F +
Sbjct: 145 YTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFP-EPRQRWIDALA 203
Query: 196 VYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVY 251
++ + ++ G D++ + + L E + A + + GH +E+ +
Sbjct: 204 SSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRF 262
Query: 252 NRQL 255
NR +
Sbjct: 263 NRLV 266
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-31
Identities = 44/249 (17%), Positives = 77/249 (30%), Gaps = 42/249 (16%)
Query: 46 HAVVLLH--PFGFDGILTWQFQVLA-LAKTYEVYVPDFLFFGSSVTDRPDR-TASFQAEC 101
V++LH G G + V + Y V + D F S D A
Sbjct: 34 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 93
Query: 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161
+ + L +++ LVG + GG A YPD + +++ GL S+ A +
Sbjct: 94 VKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG-GLGPSM-FAPMPME 151
Query: 162 GYESWVDFLLPKTADALKVQFDIACY-------------------------------KLP 190
G + + + LK + Y +
Sbjct: 152 GIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKA 211
Query: 191 TLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246
L + L +I + WG +D+ + L + +A + K G E
Sbjct: 212 PLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGAWAQWE 270
Query: 247 RPFVYNRQL 255
+NR +
Sbjct: 271 HADEFNRLV 279
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-31
Identities = 43/248 (17%), Positives = 97/248 (39%), Gaps = 37/248 (14%)
Query: 46 HAVVLLHPFGF--DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTAS--FQAEC 101
V+L+H G + W+ + LA+ Y V D L FG + +PD + +
Sbjct: 37 QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKT--AKPDIEYTQDRRIRH 94
Query: 102 MAKGLRKLGVE-KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160
+ ++ + + K ++VG S GG G ++ ++ +LV ++V+ S GL +
Sbjct: 95 LHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGS-AGLVVEIHEDLRPI 153
Query: 161 IGYESWVDFLLPK-----------TADALKVQFDIACYK------LPTLPAFVYKHI--- 200
I Y+ + ++ + ++ A + + T+ +
Sbjct: 154 INYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFY 213
Query: 201 ----LEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYN 252
+ K+ ++ G++DK+ ++ A + + ++ I GH +E P +
Sbjct: 214 DPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFA 272
Query: 253 RQLKTILA 260
+ L+
Sbjct: 273 NATLSFLS 280
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-30
Identities = 45/251 (17%), Positives = 82/251 (32%), Gaps = 40/251 (15%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
+VLLH +G + W+ L+ + +++ D FG S + MA+
Sbjct: 13 NVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRS-----RGFGALSLADMAE 66
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--------- 155
+ + +K +G S GG+V ++A +P+ V ++V S +
Sbjct: 67 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLA 126
Query: 156 ---AALERIGYESWVDFLLPKTADALKVQFDIACYK-----LPTLPAFVYKHILE----- 202
L + FL +T + D K LP V LE
Sbjct: 127 GFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTV 186
Query: 203 -------KIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVY 251
+ L+G D + +V L + ++ KA H + P +
Sbjct: 187 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEF 245
Query: 252 NRQLKTILASL 262
L + +
Sbjct: 246 CHLLVALKQRV 256
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-30
Identities = 48/255 (18%), Positives = 78/255 (30%), Gaps = 46/255 (18%)
Query: 47 AVVLLHPFGFD--GILTWQFQVLAL-AKTYEVYVPDFLFFGSSVTDRPDR---TASFQAE 100
VVLLH G G + + L Y V + D +G S D + A
Sbjct: 38 TVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSVVNSGSRSDLNAR 95
Query: 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160
+ + +L + K L+G S GG +P+ V +V+ S+
Sbjct: 96 ILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGG-TGGMSLFTPMPTE 154
Query: 161 IGYESWVDFLLPKTADALKVQFDIACYKLPTL-PAFVYKHI------------------- 200
G + T + LK+ DI + L A +
Sbjct: 155 -GIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEA 213
Query: 201 -----------LEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 245
L +I ++WG ND+ M L + + + GH
Sbjct: 214 NPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGI-AGSELHIFRDCGHWAQW 272
Query: 246 ERPFVYNRQLKTILA 260
E +N+ + LA
Sbjct: 273 EHADAFNQLVLNFLA 287
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-29
Identities = 39/249 (15%), Positives = 76/249 (30%), Gaps = 38/249 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR--TASFQAECMAK 104
++ H + ++ ++ L+ + D G S D+P+ A+ A+ +A
Sbjct: 70 LMLFFHGITSNS-AVFEPLMIRLSDRFTTIAVDQRGHGLS--DKPETGYEANDYADDIAG 126
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI--- 161
+R L LVG S G A YPDLV S+V + +A R+
Sbjct: 127 LIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAG 186
Query: 162 --------GYESWVDFLLPKTADALK-------VQFDIACYKLPTLPAFV---------- 196
E+++ P Q + A +
Sbjct: 187 SQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSD 246
Query: 197 YKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYN 252
+ ++ GE+ K+ + + + A H VN P +
Sbjct: 247 LVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLR-PDLPVVVVPGADHYVNEVSPEITL 305
Query: 253 RQLKTILAS 261
+ + + +
Sbjct: 306 KAITNFIDA 314
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 8e-29
Identities = 44/255 (17%), Positives = 89/255 (34%), Gaps = 43/255 (16%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP----DRTASFQ--AE 100
+++ FG D W A + + V + D++ G S D +R + A+
Sbjct: 22 SIMFAPGFGCDQ-SVWNAVAPAFEEDHRVILFDYVGSGHS--DLRAYDLNRYQTLDGYAQ 78
Query: 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV-----------MGL 149
+ L +++ VG S G ++G + P+L +V+ G
Sbjct: 79 DVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGF 138
Query: 150 TESVSNAALERI--GYESWVDFLL---------PKTADALKVQF---DIACYKLPTLPAF 195
E LE + Y W P+ + L+ +F D A
Sbjct: 139 EEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIA-RQFAKAA 197
Query: 196 V---YKHILEKI----HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248
++ L K+ +L +D I V + + + + ++++ +E GH ++ P
Sbjct: 198 FFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP-YSSLKQMEARGHCPHMSHP 256
Query: 249 FVYNRQLKTILASLV 263
+ + L + V
Sbjct: 257 DETIQLIGDYLKAHV 271
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-28
Identities = 37/249 (14%), Positives = 83/249 (33%), Gaps = 32/249 (12%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
A++LL + D +++ + L + V VP++ G S ++ PD Q + + L
Sbjct: 29 AILLLPGWCHDH-RVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEIL 87
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVSNAALERI---- 161
+LGVE V S+GG V ++ E P+ ++ +M + +L +
Sbjct: 88 DQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPE 147
Query: 162 ----GYESWVDFLLPKTADALKVQFDI-------------------ACYKLPTLPAFVYK 198
G D L + + Y P +
Sbjct: 148 RWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMA 207
Query: 199 HILEK--IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256
++ + I ++ + + ++ + EQ + + H ++ P ++
Sbjct: 208 NLTKTRPIRHIFSQPTEPEYEKINSDFAEQH-PWFSYAKLGGPTHFPAIDVPDRAAVHIR 266
Query: 257 TILASLVHA 265
++
Sbjct: 267 EFATAIRQG 275
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 2e-28
Identities = 43/243 (17%), Positives = 81/243 (33%), Gaps = 33/243 (13%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQ--AECMAK 104
+ L + G + W Q+ AL + + V D G+S P + E + +
Sbjct: 29 LLALSNSIGTTLHM-WDAQLPALTRHFRVLRYDARGHGAS--SVPPGPYTLARLGEDVLE 85
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-----NAALE 159
L L V + +G+S GG+VG +A P +E +V+ + L + A L+
Sbjct: 86 LLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQ 145
Query: 160 RIGYESWVDFLL-----PKTADALKVQFDIACYKLPTLPAFVYKHI------------LE 202
L P + + + L L
Sbjct: 146 AEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLA 205
Query: 203 KIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTI 258
+I ++ G D + + + A + ++ A HL N+E P + + +
Sbjct: 206 RIERPTLVIAGAYDTVTAASHGELIAASI-AGARLVTLP-AVHLSNVEFPQAFEGAVLSF 263
Query: 259 LAS 261
L +
Sbjct: 264 LGA 266
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 3e-28
Identities = 33/255 (12%), Positives = 74/255 (29%), Gaps = 49/255 (19%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK-- 104
+ + H + Y VY+ + G+S D + + K
Sbjct: 25 PLCVTHLYSEYND-NGNTFANPFTDHYSVYLVNLKGCGNS--DSAKNDSEYSMTETIKDL 81
Query: 105 -GLRK-LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG-------------- 148
+R+ L + K G S GGM+ A + + ++V +
Sbjct: 82 EAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSK 141
Query: 149 -------------LTESVSNAALERIGYESWVDFLLPKTAD---ALKVQFD-------IA 185
L + + + W ALK+ +
Sbjct: 142 NVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLN 201
Query: 186 CYKLPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 241
++ + + L+ + + G++D + + + NAT+ E++ H
Sbjct: 202 YFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLI-PNATLTKFEESNH 260
Query: 242 LVNLERPFVYNRQLK 256
+E +N+ +
Sbjct: 261 NPFVEEIDKFNQFVN 275
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 4e-28
Identities = 51/272 (18%), Positives = 97/272 (35%), Gaps = 63/272 (23%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR---TASFQAECM 102
++L+H F TW+ + LA Y V D + F S +P + A
Sbjct: 48 TILLMHGKNFCA-GTWERTIDVLADAGYRVIAVDQVGFCKS--SKPAHYQYSFQQLAANT 104
Query: 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162
L +LGV + +++G S GGM+ + A +YP VE +V+ + GL + + +
Sbjct: 105 HALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI-GLEDWKA-LGVPWRS 162
Query: 163 YESWVDFLLPKTADALK-------------------VQFDIACYKLPTLPAFVYK----- 198
+ W L +A+ ++ VQ Y+ + +
Sbjct: 163 VDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTY 222
Query: 199 ---------HILEKIH----LLWGENDKIF----------------DMQVARNLKEQVGQ 229
+ L+++ LL GE D Q+ ++ ++
Sbjct: 223 DMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI-P 281
Query: 230 NATMESIEKAGHLVNLERPFVYNRQLKTILAS 261
AT+ GH ++ P +++ L L +
Sbjct: 282 QATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 5e-28
Identities = 46/251 (18%), Positives = 89/251 (35%), Gaps = 39/251 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSS--VTDRPDRTASFQ--AECM 102
V+L H FG D W+F + L K + V V D++ G S + R +S + A+ +
Sbjct: 30 TVLLAHGFGCDQ-NMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDV 88
Query: 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV-----------MGLTE 151
+ L L + +++G S ++ + D + + + C G
Sbjct: 89 EEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFER 148
Query: 152 SVSNAALERI--GYESWVDFLLPK---------TADALKVQF---DIACYKLPTLPAFV- 196
+ + Y W ++L P L F D A
Sbjct: 149 DDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVA-KTFAKATFF 207
Query: 197 --YKHILEKI----HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 250
Y+ +LE I + D + +V + + E + N+ +E I+ GH +++ +
Sbjct: 208 SDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLHMTDAGL 266
Query: 251 YNRQLKTILAS 261
L + +
Sbjct: 267 ITPLLIHFIQN 277
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 8e-28
Identities = 41/241 (17%), Positives = 78/241 (32%), Gaps = 32/241 (13%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQ--AECMAK 104
+VL + G D + W QV AL+K + V D G S + P + + +
Sbjct: 28 WIVLSNSLGTDLSM-WAPQVAALSKHFRVLRYDTRGHGHS--EAPKGPYTIEQLTGDVLG 84
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN----AALER 160
+ L + + G+S GG+ G +A + D +E + + + +
Sbjct: 85 LMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKART 144
Query: 161 IGYESWVDFLL-----PKTADALKVQFDIACYKLPTLPAFVYKHI------------LEK 203
G + D +L + V + Y
Sbjct: 145 EGMHALADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPG 204
Query: 204 IH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259
I ++ G +D R L + + A ++ A H+ N+ER + + + L
Sbjct: 205 IKVPALVISGTHDLAATPAQGRELAQAI-AGARYVELD-ASHISNIERADAFTKTVVDFL 262
Query: 260 A 260
Sbjct: 263 T 263
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-27
Identities = 31/232 (13%), Positives = 76/232 (32%), Gaps = 23/232 (9%)
Query: 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103
+ ++ +H G + + + Y + D G S P + + +A
Sbjct: 15 SPNTLLFVHGSGCNLK-IFGELE-KYLEDYNCILLDLKGHGESKGQCPSTVYGY-IDNVA 71
Query: 104 KGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV---MGLTESVSNA 156
+ V + TL+G S GG + +A V +V L +
Sbjct: 72 NFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEK 131
Query: 157 ALERIGYESWVDFLLPKTADALKVQF--------DIACYKLPTLPAFVYKHILEKIH--- 205
+++ + + L ++ DI L L+ I
Sbjct: 132 IYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPV 191
Query: 206 -LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256
+ +++ + ++ + +K++V +N+ ++ E H + + ++K
Sbjct: 192 KAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETGKHFLLVVNAKGVAEEIK 242
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 2e-23
Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 58/254 (22%)
Query: 19 VGMTQRTIEIEPGTI-LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVL--ALAKT-YE 74
+ + + I++ + V + ++ L H + F + W L +K Y
Sbjct: 2 MALQEEFIDVNGTRVFQRKMVTDS--NRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYN 58
Query: 75 VYVPDFLFFGSSVTDRPDR------TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFK 128
VY PD+ FG S ++ AE + L+ GV + ++G S GG +
Sbjct: 59 VYAPDYPGFGRS--ASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIM 116
Query: 129 MAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYK 188
YPD+V+ ++
Sbjct: 117 TTLQYPDIVDGIIAVAPAW----------------------------------------- 135
Query: 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248
K I +K L+WG D + + +++ + + +E +E +GH V +E+P
Sbjct: 136 -VESLKGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVYIEKP 193
Query: 249 FVYNRQLKTILASL 262
+ R L +L
Sbjct: 194 EEFVRITVDFLRNL 207
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 2e-22
Identities = 42/257 (16%), Positives = 76/257 (29%), Gaps = 42/257 (16%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF----QAECM 102
A+ +LH + + + + V D G S + P F E
Sbjct: 27 ALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRS-LELPQDPRLFTVDALVEDT 85
Query: 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV--TCSVMGLTESVSNAALER 160
LGVE+ L+ +G +V ++ +P ++++ + L ++ AA
Sbjct: 86 LLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLA 145
Query: 161 IGYESWVDFLLPKTADALKVQFDIACYKLPTLPA-------------------------- 194
+ + + K FD + P
Sbjct: 146 PLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGL 205
Query: 195 --FVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248
Y L +L GE D A + + +AGH + ++ P
Sbjct: 206 WRLDYTPYLTPERRPLYVLVGERDGTSYPYAEEVASR---LRAPIRVLPEAGHYLWIDAP 262
Query: 249 FVYNRQLKTILASLVHA 265
+ K LA+LV A
Sbjct: 263 EAFEEAFKEALAALVPA 279
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 2e-22
Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 55/252 (21%)
Query: 19 VGMTQRTIEIEPGTI-LNIWVPKKTTKKHAVVLLHPFGFDGILTWQF--QVLALAKT-YE 74
V + TI+++ + +P + +V+LLH F TWQ + LA+ Y
Sbjct: 5 VEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSS-ETWQNLGTLHRLAQAGYR 63
Query: 75 VYVPDFLFFGSSVTDRPDRTASF----QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130
D G S A +A + L + ++ S GM
Sbjct: 64 AVAIDLPGLGHS--KEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFL 121
Query: 131 EMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLP 190
+ V +A
Sbjct: 122 TAPGSQLPGFVP-----------------------------------------VAPICTD 140
Query: 191 TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 250
+ A Y + +++G+ D + Q + +Q+ N + ++ AGH L++P
Sbjct: 141 KINAANYASVKTPALIVYGDQDPM--GQTSFEHLKQL-PNHRVLIMKGAGHPCYLDKPEE 197
Query: 251 YNRQLKTILASL 262
++ L L L
Sbjct: 198 WHTGLLDFLQGL 209
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 5e-21
Identities = 46/248 (18%), Positives = 91/248 (36%), Gaps = 42/248 (16%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
V+ H + D W++Q+ L+ + Y D FG S D+P + A+ +A
Sbjct: 21 PVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRGFGRS--DQPWTGNDYDTFADDIA 77
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFK-MAEMYPDLVESMVVTCSVM-----------GLTE 151
+ + L +++ TLVG S GG + +A V +V+ +V G+
Sbjct: 78 QLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPL 137
Query: 152 SVSN---AALERIGYESWVDFLLP--------KTADALKVQFDIACYK------LPTLPA 194
V L + + DF P + ++ Q + + A
Sbjct: 138 DVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTA 197
Query: 195 FV---YKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247
F ++ + KI ++ G+ D+I + + ++ + A ++ + A H +
Sbjct: 198 FAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTH 257
Query: 248 PFVYNRQL 255
N L
Sbjct: 258 AQQLNEDL 265
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 2e-20
Identities = 15/131 (11%), Positives = 32/131 (24%), Gaps = 6/131 (4%)
Query: 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDG-ILTWQFQVLALAKTYEVY 76
+ + + + G I V L GF + + L + +
Sbjct: 18 MAALNKEMVNTLLGPIYTCHREGNPC----FVFLSGAGFFSTADNFANIIDKLPDSIGIL 73
Query: 77 VPDFLFFG-SSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD 135
D G S V+++ + + + L S GG ++
Sbjct: 74 TIDAPNSGYSPVSNQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSK 133
Query: 136 LVESMVVTCSV 146
+
Sbjct: 134 ACLGFIGLEPT 144
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-20
Identities = 46/250 (18%), Positives = 76/250 (30%), Gaps = 37/250 (14%)
Query: 47 AVVLLHPFGFDGILTWQFQVLA--LAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
VV + G G TW + LA Y D G++ T + A
Sbjct: 45 PVVFIAGRGGAG-RTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTM-VADTAA 102
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG--------------LT 150
+ L + +VGVS G + ++ + P+LV S V+ + L
Sbjct: 103 LIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELY 162
Query: 151 ESVSNAALERIGYESWVDFLLPKTA--DALKVQFDIACYKLPTLPAFVYKHILE------ 202
+S ++ KT D + P + L+
Sbjct: 163 DSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTN 222
Query: 203 ------KIHL----LWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYN 252
I + +D + + R + + + N I AGHL ERP N
Sbjct: 223 RLPAYRNIAAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERPEAVN 281
Query: 253 RQLKTILASL 262
+ AS+
Sbjct: 282 TAMLKFFASV 291
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 1e-19
Identities = 46/252 (18%), Positives = 90/252 (35%), Gaps = 48/252 (19%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
VVL+H + G +W++QV AL + Y V D FG S +P + +
Sbjct: 29 PVVLIHGWPLSG-RSWEYQVPALVEAGYRVITYDRRGFGKS--SQPWEGYEYDTFTSDLH 85
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVM------------GLT 150
+ L +L ++ TLVG S GG + Y D +E +V +V L
Sbjct: 86 QLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALD 145
Query: 151 ESVSNAALERI--GYESWVDFLLP----------KTADALKVQFD-----------IACY 187
++ + +++D +++ ++ + C
Sbjct: 146 DATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCI 205
Query: 188 KLPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243
++ LEK + ++ G++D + + L + N+ + I+ H +
Sbjct: 206 T--AFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGL 263
Query: 244 NLERPFVYNRQL 255
N +N L
Sbjct: 264 NATHAKEFNEAL 275
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 1e-19
Identities = 40/250 (16%), Positives = 79/250 (31%), Gaps = 44/250 (17%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
+V H + + +W+ Q++ LA + Y V D G S +P A+ +A
Sbjct: 21 PIVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDRRGHGRS--SQPWSGNDMDTYADDLA 77
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSV-----------MGLTE 151
+ + L + L G S GG + + V + +V GL
Sbjct: 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPM 137
Query: 152 SVSNAALERI------GYESWVD--FLLPKTADALKVQFDIACYKLPTLPAFVYKHI--- 200
V + + Y+ F A + + L + A
Sbjct: 138 EVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCI 197
Query: 201 -----------LEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 245
L+KI ++ G+ D++ ++ + + + +T++ A H +
Sbjct: 198 KAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTD 257
Query: 246 ERPFVYNRQL 255
N L
Sbjct: 258 THKDQLNADL 267
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-19
Identities = 47/253 (18%), Positives = 77/253 (30%), Gaps = 36/253 (14%)
Query: 36 IWVPKKTTKKHAVVLLHPFGFDGIL-TWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR- 93
+ +VL+H G G L L + + D G S R
Sbjct: 7 AQTAQNQHNNSPIVLVH--GLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLS--PREPVM 62
Query: 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV 153
A+ + L L ++K T +G S GG + + PD ++ +V + +
Sbjct: 63 NYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAID--IAPVDYH 120
Query: 154 SNAALERIGYESWVDFLLPKT------------ADALKVQF-------DIACYKLPTL-- 192
E + V +T + +QF + +P L
Sbjct: 121 VRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWD 180
Query: 193 --PAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246
P V + + G N Q +L Q A I AGH V+ E
Sbjct: 181 QYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF-PQARAHVIAGAGHWVHAE 239
Query: 247 RPFVYNRQLKTIL 259
+P R ++ L
Sbjct: 240 KPDAVLRAIRRYL 252
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 2e-19
Identities = 49/274 (17%), Positives = 91/274 (33%), Gaps = 53/274 (19%)
Query: 32 TILN--IWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVT 88
++L+ + K T + VVL+H G WQ + LA+T D G++
Sbjct: 1 SLLSNQLHFAKPTARTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPGHGTNPE 59
Query: 89 DRPDRTASFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146
D A E + + ++ LVG S GG + ++
Sbjct: 60 RHCDNFAEA-VEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIE 118
Query: 147 MGLTESVSNAAL-----------ERIGYESWVDFL-------LPKTADALKVQFDIACYK 188
G N +R + L + + + + Q IA +
Sbjct: 119 GGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIA-QR 177
Query: 189 LPTLPAFVYKHILE-------------------KIHLLWGENDKIFDMQVARNLKEQVGQ 229
L + H+L IH + GE D F Q+A +
Sbjct: 178 SANLGS-SVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-QQLAESS------ 229
Query: 230 NATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263
+ + +AGH V+ E+P + + ++ ++ S++
Sbjct: 230 GLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 3e-19
Identities = 47/294 (15%), Positives = 85/294 (28%), Gaps = 87/294 (29%)
Query: 20 GMTQ---RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVY 76
GM + R G L+ + + V+ L + ++ LA + V
Sbjct: 1 GMAEYEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNA-RDFEDLATRLAGDWRVL 59
Query: 77 VPDFLFFGSSVTDRPDRTASFQ----AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132
P+ G S D ++Q + + L + G+E+ +G S GG++ +A
Sbjct: 60 CPEMRGRGDS--DYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAA 117
Query: 133 YPDLVESMVVTCSVMGLTESVSNAALERI--------GYESW---VDFLL---------- 171
P + + V+ ++ LERI +E+W L
Sbjct: 118 NPARIAAAVLNDVGPEVSP----EGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDW 173
Query: 172 --------------------------PKTADALKVQFDI-----------ACYKLPTLPA 194
K A+ + A P L
Sbjct: 174 DITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLL-- 231
Query: 195 FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248
+L GE I Q A + + + ++ + GH L+ P
Sbjct: 232 -----------VLRGETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEP 272
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 5e-19
Identities = 49/253 (19%), Positives = 84/253 (33%), Gaps = 48/253 (18%)
Query: 47 AVVLLHPFGFDGILTWQFQVLAL-AKTYEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
VVL+H + DG +W+ Q L A+ Y V D FG S + + + A +
Sbjct: 25 PVVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRGFGGS--SKVNTGYDYDTFAADLH 81
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSV-----------MGLTE 151
L L + LVG S G + Y + V + S+ G+ +
Sbjct: 82 TVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQ 141
Query: 152 SVSN---AALERIGYESWVDFLLP----------KTADALKVQFDIACYK------LPTL 192
V + AA + + + DF + ++ +
Sbjct: 142 EVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVV 201
Query: 193 PAFV--YKHILEKIH-------LLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHL 242
PA++ ++ +E + +L G D I + AR + V A +E A H
Sbjct: 202 PAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEVEGAPHG 260
Query: 243 VNLERPFVYNRQL 255
+ N L
Sbjct: 261 LLWTHADEVNAAL 273
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 8e-19
Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 47/252 (18%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
VV +H + +G WQ Q+ A+ Y D G S F A+ +
Sbjct: 21 PVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRGHGHS--TPVWDGYDFDTFADDLN 77
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSV-----------MGLTE 151
L L + TLV S GG + + + S V+ ++ G+ +
Sbjct: 78 DLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPD 137
Query: 152 SVSNAALERI------GYESWVD-FLLPKTADALKVQFDIACYKLPTLPAFVYKHI---- 200
V +A + ++ + F Q + + + + +
Sbjct: 138 EVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVD 197
Query: 201 ----------LEKIH----LLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVNL 245
L+K ++ G++D++ + R + + NA ++ E + H + +
Sbjct: 198 AFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQII-PNAELKVYEGSSHGIAM 256
Query: 246 --ERPFVYNRQL 255
+NR L
Sbjct: 257 VPGDKEKFNRDL 268
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-18
Identities = 44/251 (17%), Positives = 79/251 (31%), Gaps = 46/251 (18%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
VVL+H F G +W+ Q AL Y V D FG S +P + A +
Sbjct: 25 PVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQS--SQPTTGYDYDTFAADLN 81
Query: 104 KGLRKLGVEKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSV---MGLTESVSNAALE 159
L L ++ LVG S G V ++ + + S+ + T+ + A
Sbjct: 82 TVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAP 141
Query: 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFV----------------------- 196
+ ++ V + F+ L +
Sbjct: 142 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAA 201
Query: 197 -------YKHILEKIH----LLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVN 244
++ + +I +L G D+ ++ AR + + +A +E A H +
Sbjct: 202 PTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEGAPHGLL 260
Query: 245 LERPFVYNRQL 255
N L
Sbjct: 261 WTHAEEVNTAL 271
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 2e-18
Identities = 28/234 (11%), Positives = 62/234 (26%), Gaps = 37/234 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF--QAECMAK 104
+ LL + D ++ LA+ + V PD+ + A+ +
Sbjct: 23 TLFLLSGWCQDH-RLFKNLAPLLARDFHVICPDWRGHDAK--QTDSGDFDSQTLAQDLLA 79
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESV-------SNA 156
+ G+ +V S+G V + E + ++ ++ +
Sbjct: 80 FIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHP 139
Query: 157 ALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIH----------- 205
G +S+ D T +A + ++P +++ +I
Sbjct: 140 TEYVAGRQSFFDEWAETTDNADVLNHLRN--EMPWFHGEMWQRACREIEANYRTWGSPLD 197
Query: 206 -----------LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248
D + + I H +LE P
Sbjct: 198 RMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSLENP 251
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 3e-18
Identities = 42/257 (16%), Positives = 81/257 (31%), Gaps = 46/257 (17%)
Query: 47 AVVLLHPFGFDGILTWQFQVLAL-AKTYEVYVPDFLFFG-SSVTDRPDRTASFQAECMAK 104
+ H + W Q+L A Y V D G SS + A+ +A
Sbjct: 24 VIHFHHGWPLSA-DDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHY-ADDVAA 81
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYP-DLVESMVVTCSV-----------MGLTES 152
+ LG++ VG S GG + +P D V V+ +V GL +S
Sbjct: 82 VVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKS 141
Query: 153 VSNAALERI------GYESWVDFLL-------PKTADALKVQFD-----------IACYK 188
V + ++ Y + ++ + +
Sbjct: 142 VFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIV 201
Query: 189 LPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVN 244
+ L+ I ++ G++D+I + + L ++ N +++ + H +
Sbjct: 202 --AFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMP 259
Query: 245 LERPFVYNRQLKTILAS 261
V N L + S
Sbjct: 260 TTHADVINADLLAFIRS 276
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 5e-18
Identities = 51/258 (19%), Positives = 79/258 (30%), Gaps = 48/258 (18%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
VV H + W Q+L Y V D G S D+P A +A
Sbjct: 23 PVVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRGHGRS--DQPSTGHDMDTYAADVA 79
Query: 104 KGLRKLGVEKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSV-----------MGLTE 151
L + +G S GG V +A P V V+ +V GL
Sbjct: 80 ALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPL 139
Query: 152 SVSN---AALERIGYESWVDFLL----------PKTADALKVQF-----------DIACY 187
V + AAL + ++D + L + C
Sbjct: 140 EVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECI 199
Query: 188 KLPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243
+ L++I + G +D++ A ++ NAT++S E H +
Sbjct: 200 A--AFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGM 257
Query: 244 NLERPFVYNRQLKTILAS 261
P V N L + S
Sbjct: 258 LSTHPEVLNPDLLAFVKS 275
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 79.4 bits (195), Expect = 1e-17
Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 39/278 (14%)
Query: 16 LKLVGMTQRTIEIEPGTI-LNIWVPKKTTKKHAVVLLHPFGFD-----GILTWQFQVLAL 69
+ ++E G++ ++ K K+ A+ H G + L + +
Sbjct: 6 IHHHHHHTHSVETPYGSVTFTVYGTPKP-KRPAIFTYHDVGLNYKSCFQPLFRFGDMQEI 64
Query: 70 AKTYEVYVPDFLFFGSSVTDRPDR----TASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125
+ + D P + A+ + L+ L VGV G +
Sbjct: 65 IQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYI 124
Query: 126 GFKMAEMYPDLVESMVVTCSV--------------MGLTESVSNAALERI----GYESWV 167
+ A +PD VE +V+ GLT S+ + L +
Sbjct: 125 LSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPDMILGHLFSQEELSGNS 184
Query: 168 DFL------LPKTADALKVQFDIACY---KLPTLPAFVYKHILEKIHLLWGENDKIFDMQ 218
+ + + + ++ Y + + + L+ G+ D
Sbjct: 185 ELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAV 244
Query: 219 VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256
V N + + + +G L +P K
Sbjct: 245 VECN-SKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFK 281
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 80.6 bits (199), Expect = 2e-17
Identities = 43/251 (17%), Positives = 74/251 (29%), Gaps = 46/251 (18%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ--AECMA 103
VVL+H F G +W+ Q AL Y V D FG S +P + A +
Sbjct: 26 PVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQS--SQPTTGYDYDTFAADLN 82
Query: 104 KGLRKLGVEKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162
L L ++ LVG S G V ++ + ++ S+ +
Sbjct: 83 TVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAP 142
Query: 163 YESWVDFLLPKTADALKVQFDIA---------------------CYKLPTLPAFV----- 196
E + + AD + F
Sbjct: 143 QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAA 202
Query: 197 -------YKHILEKIH----LLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVN 244
++ + +I +L G D+ ++ AR + + +A +E A H +
Sbjct: 203 PTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL-PSAEYVEVEGAPHGLL 261
Query: 245 LERPFVYNRQL 255
N L
Sbjct: 262 WTHAEEVNTAL 272
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 2e-17
Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 59/263 (22%)
Query: 48 VVLLHPFGFDGILTW--QFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF-----QAE 100
+++LH + LA V D + G+S T PD A F +
Sbjct: 57 LIVLHGGPGMAH-NYVANIAALADETGRTVIHYDQVGCGNS-THLPDAPADFWTPQLFVD 114
Query: 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV-------------- 146
LG+E+ ++G S+GGM+G ++A P + S+ + S
Sbjct: 115 EFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLR 174
Query: 147 ----------------MGLTESVSNAALERIGYESWVDFLLPKTADAL----KVQFDIAC 186
G Y V ++P D +++ +
Sbjct: 175 AQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTV 234
Query: 187 YKLP----------TLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNAT 232
Y TL + L + ++ GE+D+ + + + + +
Sbjct: 235 YHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHI-PDVR 292
Query: 233 MESIEKAGHLVNLERPFVYNRQL 255
H +LE+P + +
Sbjct: 293 SHVFPGTSHCTHLEKPEEFRAVV 315
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 6e-17
Identities = 40/279 (14%), Positives = 76/279 (27%), Gaps = 71/279 (25%)
Query: 47 AVVLLH--P-FGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQ--AEC 101
V+ LH P W+ + ++ PD + FG S +PD F
Sbjct: 31 VVLFLHGNPTSSH----IWRNILPLVSPVAHCIAPDLIGFGQS--GKPDIAYRFFDHVRY 84
Query: 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161
+ + + GV LV +G + F +A PD V + + + + +
Sbjct: 85 LDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRG-LAFMEFIRPMPTWQDFHHTEV 143
Query: 162 GYES---------WVDFLLPKTADALKVQF-------------------DIACYKLP--- 190
E + F P +A+ ++ ++A Y+ P
Sbjct: 144 AEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPT 203
Query: 191 ------------TLPAFV-----------YKHILEKIH----LLWGENDKIFDMQVARNL 223
LP L L GE + + A
Sbjct: 204 PESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERF 263
Query: 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262
+ + + H + + R + +A +
Sbjct: 264 AASL-TRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGI 301
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 2e-16
Identities = 47/286 (16%), Positives = 82/286 (28%), Gaps = 70/286 (24%)
Query: 47 AVVLLH--P-FGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ--AE 100
V+ LH P + W+ + + Y PD + G S +PD Q
Sbjct: 31 PVLFLHGNPTSSY----LWRNIIPYVVAAGYRAVAPDLIGMGDS--AKPDIEYRLQDHVA 84
Query: 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS-VMGLTESVSNAALE 159
M + LG++ LV +G ++G + A + PD V ++ + V S A+
Sbjct: 85 YMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMG 144
Query: 160 RIGYESWVDFLLPKTADALKVQF--------------------DIACYKLP--------- 190
+ D + + + ++A Y+ P
Sbjct: 145 PQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLP 204
Query: 191 -----------------TLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQ 229
L L E + V L E V
Sbjct: 205 TLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENV-P 263
Query: 230 NATMESIEKAGHLVNLERPFVYNRQLKTIL------ASLVHANGQH 269
N + + H + + P + + + L ASL H + H
Sbjct: 264 NLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHASLEHHHHHH 309
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 4e-16
Identities = 37/275 (13%), Positives = 77/275 (28%), Gaps = 63/275 (22%)
Query: 47 AVVLLHPFGFDGILTW--QFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
A++L+ + W +F V D G S T R + +A
Sbjct: 25 ALLLVMGGNLSALG-WPDEFARRLADGGLHVIRYDHRDTGRS-TTRDFAAHPYGFGELAA 82
Query: 105 G----LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS--------------V 146
L GV++ +VG+S G + +A + D + S+ + +
Sbjct: 83 DAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVM 142
Query: 147 MGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAF----------- 195
G ++ ++ P A +V ++ +++ +
Sbjct: 143 RGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWE 202
Query: 196 -------------VYKHI------------LEKIHL----LWGENDKIFDMQVARNLKEQ 226
Y H L ++ + + E+D I ++L
Sbjct: 203 ERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGL 262
Query: 227 VGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261
+ A + I GH + + S
Sbjct: 263 I-PTARLAEIPGMGHALPSSVHGPLAEVILAHTRS 296
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 4e-16
Identities = 38/235 (16%), Positives = 63/235 (26%), Gaps = 42/235 (17%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
VVL+ LA + V D G S D P + E +A +
Sbjct: 25 PVVLVGGALSTR-AGGAPLAERLAPHFTVICYDRRGRGDS-GDTPPYAVEREIEDLAAII 82
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN---------AA 157
G + G+S G + A + V A
Sbjct: 83 DAAG-GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPVPPDYQTRLDAL 141
Query: 158 LERIGYESWVDFLLPKT---------------------ADALKVQFDIACYKLPTLPAFV 196
L V + + + A A + +D A T+P
Sbjct: 142 LAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTAR 201
Query: 197 YKHI----LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247
+ I L ++ G + A+ L + + NA ++E H V +
Sbjct: 202 FASISIPTL----VMDGGASPAWIRHTAQELADTI-PNARYVTLENQTHTVAPDA 251
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 7e-15
Identities = 46/267 (17%), Positives = 81/267 (30%), Gaps = 58/267 (21%)
Query: 47 AVVLLH--P-FGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQ--AEC 101
V+ LH P + W+ + +A ++ PD + G S D+PD F
Sbjct: 34 PVLFLHGNPTSSY----LWRNIIPHVAPSHRCIAPDLIGMGKS--DKPDLDYFFDDHVRY 87
Query: 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMA----------------------EMYPDLVES 139
+ + LG+E+ LV +G +GF A + +P+
Sbjct: 88 LDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARE 147
Query: 140 MVVTCSVMGLTESV---SNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL---- 192
+ + NA +E + V L D + F + P
Sbjct: 148 TFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPN 207
Query: 193 ---------------PAFV-YKHILEK-IHLLWGENDKIFDMQVARNLKEQVGQNATMES 235
A++ + H L WG + A L E + N
Sbjct: 208 ELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVD 266
Query: 236 IEKAGHLVNLERPFVYNRQLKTILASL 262
I H + + P + ++ L +L
Sbjct: 267 IGPGLHYLQEDNPDLIGSEIARWLPAL 293
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 6e-14
Identities = 46/249 (18%), Positives = 78/249 (31%), Gaps = 54/249 (21%)
Query: 45 KHAVVLLH--P-FGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR----TAS 96
+H + LH P + F ++ + V PD FG S D+P T
Sbjct: 46 EHTFLCLHGEPSWSF----LYRKMLPVFTAAGGRVVAPDLFGFGRS--DKPTDDAVYTFG 99
Query: 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA 156
F + L L +E+ TLV +GG++G + P LV+ ++V L +S
Sbjct: 100 FHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIV--MNTALAVGLSPG 157
Query: 157 ALERIGYE-----------SWVDFLLPKTADALKVQFDIACYK--------------LPT 191
+ + +P DA +D A + +P
Sbjct: 158 KGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYD-APFPGPEFKAGVRRFPAIVPI 216
Query: 192 LPAFVYKHILEKIH------------LLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 239
P I + + G D + +V L++ + +E
Sbjct: 217 TPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAG 276
Query: 240 GHLVNLERP 248
GH V
Sbjct: 277 GHFVQEHGE 285
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 7e-14
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Query: 47 AVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF-------Q 98
++LLH GF + W LA+ ++V V D +G S D P+
Sbjct: 35 PLLLLH--GFPQTHVMWHRVAPKLAERFKVIVADLPGYGWS--DMPESDEQHTPYTKRAM 90
Query: 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
A+ + + + +LG L G + G V +++A P + + V
Sbjct: 91 AKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAV 134
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 8e-14
Identities = 36/276 (13%), Positives = 80/276 (28%), Gaps = 61/276 (22%)
Query: 47 AVVLLH--P-FGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR---TASFQAE 100
AV+ LH + W+ V + +PD + G S + +
Sbjct: 45 AVIFLHGNATSSY----LWRHVVPHIEPVARCIIPDLIGMGKS--GKSGNGSYRLLDHYK 98
Query: 101 CMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV------ 153
+ L + +K VG +G + F A + D ++++V SV+ + ES
Sbjct: 99 YLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDI 158
Query: 154 ------------------SNAALERI---GYESWVD----------FLLPKTADALKVQF 182
+N +E + ++ F + +
Sbjct: 159 EEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSW 218
Query: 183 DIACYKLPTLPAFV---------YKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATM 233
+ V Y + + L+ E+D F ++ N
Sbjct: 219 PREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGAKKF-PNTEF 277
Query: 234 ESIEKAGHLVNLERPFVYNRQLKTILASLVHANGQH 269
++ H + + P + +K+ + ++
Sbjct: 278 VKVK-GLHFLQEDAPDEMGKYIKSFVERVLKNEQVD 312
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 9e-14
Identities = 42/255 (16%), Positives = 76/255 (29%), Gaps = 48/255 (18%)
Query: 47 AVVLLHPFGFDGIL-TWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
V+ LH G TW ++ L D G S + ++ + ++
Sbjct: 83 RVIFLH--GGGQNAHTWDTVIVGLG--EPALAVDLPGHGHS--AWRED-GNYSPQLNSET 135
Query: 106 L----RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV------------------- 142
L R+L +VG+S GG+ ++A M PDLV +V+
Sbjct: 136 LAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQR 195
Query: 143 ----TCSVMGLTESVSNAA------LERIGYESWVDFLL----PKTADALKVQFDIA--C 186
S +S + ++D
Sbjct: 196 GTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTF 255
Query: 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246
L V + I L+ G + Q L + + +EK+GH V +
Sbjct: 256 GDFAGLWDDV-DALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSD 314
Query: 247 RPFVYNRQLKTILAS 261
+P ++ +L +
Sbjct: 315 QPRALIEIVRGVLDT 329
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 3e-13
Identities = 45/269 (16%), Positives = 83/269 (30%), Gaps = 64/269 (23%)
Query: 48 VVLLH--P-FGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF----QA 99
+ LH P + + ++ + A++ V PDF FG S D+P +
Sbjct: 50 FLCLHGEPTWSY----LYRKMIPVFAESGARVIAPDFFGFGKS--DKPVDEEDYTFEFHR 103
Query: 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159
+ + +L + TLV +GG +G + P + +++ + +T+ V+ A
Sbjct: 104 NFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLII-MNAXLMTDPVTQPAFS 162
Query: 160 RI------GYESWVDFLLPKTADALKVQF------------DIACYK------------- 188
G+ +W L+ T L++ + + Y
Sbjct: 163 AFVTQPADGFTAWKYDLV--TPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVR 220
Query: 189 -----LPTLPAFVYKHILEKIH-----------LLWGENDKIFDMQVARNLKEQVGQNAT 232
+ E I + G DK+ V +K +
Sbjct: 221 KFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPE 280
Query: 233 MESIEKAGHLVNLERPFVYNRQLKTILAS 261
I AGH V V LK +
Sbjct: 281 PLEIADAGHFVQEFGEQVAREALKHFAET 309
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 5e-13
Identities = 42/257 (16%), Positives = 88/257 (34%), Gaps = 63/257 (24%)
Query: 47 AVVLLHPFGF-DGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA- 103
V+ +H G + L WQ L LA + Y V PD G S + S+ +
Sbjct: 28 VVLCIH--GILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRS--SHLEMVTSYSSLTFLA 83
Query: 104 --KGL-RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160
+ ++L + LVG S G M+ +A + P ++ +++ + ES +A+ +
Sbjct: 84 QIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQ 143
Query: 161 IGYESWVDFL-----LPKTADALKVQFDIACY---------------------------- 187
+ + +D+L P D +
Sbjct: 144 LT--TCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSW 201
Query: 188 ----KLPTLPAFV--------YKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNA 231
+ ++ Y +L+ I L++G++ K+ + + K + A
Sbjct: 202 DAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTM-TQA 260
Query: 232 TMESIEKAGHLVNLERP 248
+ GH ++++
Sbjct: 261 KRVFLS-GGHNLHIDAA 276
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 66.6 bits (162), Expect = 7e-13
Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 20/138 (14%)
Query: 13 HGLLKLVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGI-LTWQFQVLALAK 71
H +L G + P + VVLLH GF +W+ Q+ ALA
Sbjct: 5 HRILNCRGTRIHAVADSPPD----------QQGPLVVLLH--GFPESWYSWRHQIPALAG 52
Query: 72 T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG----LRKLGVEKCTLVGVSYGGMVG 126
Y V D +G S + +++ + + L G E+ +VG +G V
Sbjct: 53 AGYRVVAIDQRGYGRS--SKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVA 110
Query: 127 FKMAEMYPDLVESMVVTC 144
+ A ++PD +V
Sbjct: 111 WTFAWLHPDRCAGVVGIS 128
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 8e-13
Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 25/221 (11%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103
+ AV+LLH F + L Y + P + G + + +
Sbjct: 16 ERAVLLLHGFT-GNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVM 74
Query: 104 KGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160
G L G EK + G+S GG+ K+ P +E +V C+ M + +
Sbjct: 75 NGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYE--- 129
Query: 161 IGYESWVDFLLPKTA-DALKVQFDIACYKLPTLPAFVY--------KHILEKIH----LL 207
G + + +++ ++ +K + + L+ I+ ++
Sbjct: 130 -GVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVV 188
Query: 208 WGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLER 247
+D++ + A + ++ ++ E++GH++ L++
Sbjct: 189 QARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQ 229
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-12
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 12/104 (11%)
Query: 47 AVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA---ECM 102
++LLH G+ + W LA + V D +G S RP M
Sbjct: 27 PLLLLH--GYPQTHVMWHKIAPLLANNFTVVATDLRGYGDS--SRPASVPHHINYSKRVM 82
Query: 103 AK---GL-RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
A+ + KLG E+ +VG G V ++A +P V+ + +
Sbjct: 83 AQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLAL 126
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-12
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 47 AVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA---ECM 102
A++LLH GF + W LA Y V D +G S +P M
Sbjct: 27 ALLLLH--GFPQNLHMWARVAPLLANEYTVVCADLRGYGGS--SKPVGAPDHANYSFRAM 82
Query: 103 AK---GL-RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
A L R LG E+ LVG + GG G +MA +PD V S+ V
Sbjct: 83 ASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAV 126
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 2e-12
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 47 AVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRT--ASFQAECMA 103
++LLH G+ W + LA+ Y+V VPD FG S ++PD + + + A
Sbjct: 31 TLLLLH--GWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDS--EKPDLNDLSKYSLDKAA 86
Query: 104 K---GL-RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
L LG+EK +VG + +V K Y D V +
Sbjct: 87 DDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAI 129
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 2e-11
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVP 78
M+ + ++P L+ AV L H F + +W++Q+ ALA+ Y V
Sbjct: 236 DMSHGYVTVKPRVRLHFVEL---GSGPAVCLCHGFP-ESWYSWRYQIPALAQAGYRVLAM 291
Query: 79 DFLFFGSSVTDRPDRTASFQAECMAK---GL-RKLGVEKCTLVGVSYGGMVGFKMAEMYP 134
D +G S P + E + K KLG+ + +G +GGM+ + MA YP
Sbjct: 292 DMKGYGES--SAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYP 349
Query: 135 DLVESMVVTC 144
+ V ++
Sbjct: 350 ERVRAVASLN 359
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 2e-11
Identities = 49/268 (18%), Positives = 85/268 (31%), Gaps = 65/268 (24%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD----RTASFQA 99
K ++ +H + + + K V D G S + PD
Sbjct: 28 KAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFGCGRS--EEPDQSKFTIDYGVE 84
Query: 100 ECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157
E + LR G EK L+G SYGG + A Y D ++ ++V+ + + +V
Sbjct: 85 EA--EALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV--KE 140
Query: 158 LERIGYESWVDFL-------------LPKTADALKVQFDIACYKLPTLPAFVYKH----- 199
+ R+ E + P+ +A+ + + P V K
Sbjct: 141 MNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAE 200
Query: 200 ------------------------ILEKIH-------LLWGENDKIFDMQVARNLKEQVG 228
I +KI + GE D++ VAR + E++
Sbjct: 201 RRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKI- 258
Query: 229 QNATMESIEKAGHLVNLERPFVYNRQLK 256
+ + HL E YN+ L
Sbjct: 259 AGSELHVFRDCSHLTMWEDREGYNKLLS 286
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 2e-11
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 12/104 (11%)
Query: 47 AVVLLH--P-FGFDGILTWQFQVLALAKTYEVYVPDFLFFGSS----VTDRPDRTASFQA 99
A+V H P + W+ + L + D + G+S + + Q
Sbjct: 30 AIVFQHGNPTSSY----LWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQR 85
Query: 100 ECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
+ + L + + LV +G +GF A + D V+ +
Sbjct: 86 DFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAF 129
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 62.1 bits (150), Expect = 3e-11
Identities = 46/305 (15%), Positives = 92/305 (30%), Gaps = 79/305 (25%)
Query: 32 TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTY--------EVYVPDFLFF 83
T +T + +V LH G + W++ + L +V + D +
Sbjct: 39 TSAERQRRSRTATRLNLVFLHGSGMSK-VVWEYYLPRLVAADAEGNYAIDKVLLIDQVNH 97
Query: 84 G-SSVTDRPDRTASFQAECMAKGLRKL----------GVEKCTLVGVSYGGMVGFKMAEM 132
G S+V +R +F A+ + K+ ++G S GG +
Sbjct: 98 GDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVL 157
Query: 133 YPD------LVESMVVTCSVMGLTESVSNAALERIGY----------------------- 163
P+ L+E +V+T +G +I
Sbjct: 158 QPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKY 217
Query: 164 ---------------ESWVDFLLPKTADALKVQF----------DIACYKLPTLPAFVYK 198
++ +DF K + + ++ CY A
Sbjct: 218 MRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLI 277
Query: 199 HILEKI----HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254
++ + + G Q L++ + QN ++ I HLVN+E P + +
Sbjct: 278 SNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL-QNYHLDVIPGGSHLVNVEAPDLVIER 336
Query: 255 LKTIL 259
+ +
Sbjct: 337 INHHI 341
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 4e-11
Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 8/100 (8%)
Query: 47 AVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR--TASFQAECMA 103
V+L+H GF W + LAK + V PD G S + P + A +
Sbjct: 32 LVMLVH--GFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQS--EPPKTGYSGEQVAVYLH 87
Query: 104 KGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVV 142
K R+ ++ LV G + M + +V
Sbjct: 88 KLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVY 127
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-11
Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 12/109 (11%)
Query: 47 AVVLLH--P-FGFDGILTWQFQVLALAKTYEVYVPDFLFFGSS----VTDRPDRTASFQA 99
++ H P + W+ + A + D + G S + +
Sbjct: 31 PILFQHGNPTSSY----LWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 86
Query: 100 ECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147
+ + L + ++ LV +G +GF A + + V+ + ++
Sbjct: 87 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIA 135
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 59.3 bits (143), Expect = 2e-10
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 45 KHAVVLLH-PFGFDGILT----WQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ 98
++ ++L+H G D W L + VYV + F S D P+
Sbjct: 8 RYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSD--DGPNGRGEQL 65
Query: 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
+ L G K LVG S GG+ +A + PDLV S+
Sbjct: 66 LAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTT 109
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 58.1 bits (140), Expect = 4e-10
Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 29/259 (11%)
Query: 26 IEIEPGTILNIWV----PKKTTKKHAVVLLHPFGFDGILTWQFQVLA--LAKT-YEVYVP 78
+ + G L++W K + +++ F F LA L+ + V+
Sbjct: 12 LRVNNGQELHVWETPPKENVPFKNNTILIASGFARR---MDHFAGLAEYLSTNGFHVFRY 68
Query: 79 DFL-FFGSSVTDRPDRTASFQAE---CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134
D L G S + T + + L+ G + L+ S V +++
Sbjct: 69 DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLE 128
Query: 135 DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPA 194
+ ++ V+ L +++ AL +D LP D + +
Sbjct: 129 --LSFLITAVGVVNLRDTLE-KALGFDYLSLPIDE-LPNDLDFEGHKLGSEVFVRDCFEH 184
Query: 195 FVY-----KHILEKIH----LLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVN 244
+ ND + ++ + + + S+ + H +
Sbjct: 185 HWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG 244
Query: 245 LERPFVYNRQLKTILASLV 263
E V +++ + +
Sbjct: 245 -ENLVVLRNFYQSVTKAAI 262
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 8e-10
Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 47 AVVLLHPFGF-DGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT--ASFQAECM 102
++ +H GF + +W+ Q++ LA+ Y PD +G + + F +
Sbjct: 33 TILFIH--GFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDT--TGAPLNDPSKFSILHL 88
Query: 103 AK---GL-RKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTC 144
L + EK +V +G ++ + + PD V+++V
Sbjct: 89 VGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLS 136
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-09
Identities = 40/293 (13%), Positives = 82/293 (27%), Gaps = 62/293 (21%)
Query: 22 TQRTIEIEPGTILNIW-VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK--TYEVYVP 78
+ +E+E T + + V K ++ ++LLH G L+W A+ +
Sbjct: 14 SMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSA-LSWAVFTAAIISRVQCRIVAL 72
Query: 79 DFLFFGSSVTDRPDRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMA- 130
D G + + AE MAK + + L+G S GG + A
Sbjct: 73 DLRSHGET--KVKNP-EDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTAS 129
Query: 131 EMYPDLVESMVVTCSV---------------------MGLTESVSNAALERIGYESWVDF 169
+ + + V E+ +++ +
Sbjct: 130 SNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESA 189
Query: 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIH----------------------LL 207
+ + + + + ++ L K LL
Sbjct: 190 RVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLL 249
Query: 208 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260
D++ Q+ M+ + + GH V+ + P + T L
Sbjct: 250 LAGVDRLDKDLTIG----QMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLI 298
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 2e-09
Identities = 33/239 (13%), Positives = 80/239 (33%), Gaps = 30/239 (12%)
Query: 24 RTIEIEPGTIL-NIWVPKKTTKKHAVVLLHPFGFDG-ILTWQFQVLALAKTYEVYVPDFL 81
+ G + +++P ++ + G G +L ++ +LA + +
Sbjct: 136 WRQSVRAGRVRATLFLPPGPGPFPGIIDIF--GIGGGLLEYRASLLA-GHGFATLALAYY 192
Query: 82 FFGSSVTDRPDRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPD 135
F D P+ + E + + + L+G+S G + MA +
Sbjct: 193 NFE----DLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN 248
Query: 136 LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAF 195
+ ++ + S + S + A + + + L + A DI + + +
Sbjct: 249 VSATVSINGSGI----SGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGY 304
Query: 196 VYKHIL--EKIH----LLWGENDKIFD-----MQVARNLKEQVGQNATMESIEKAGHLV 243
++ EK L+ G++D + V+ L+ + + GH +
Sbjct: 305 KNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYI 363
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 2e-09
Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 26/235 (11%)
Query: 37 WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95
+ + V+L+H F + + A AK Y V +P G+ D T
Sbjct: 34 FYAENG--PVGVLLVHGFT-GTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTF 90
Query: 96 SFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV 153
+ +G L + + G+S GG + +AE +PD+ +V + + +
Sbjct: 91 HDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDIC-GIVPINAAV----DI 145
Query: 154 SNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVY--------KHILEKIH 205
A G +L +D Y+ + + K L++I
Sbjct: 146 PAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIV 205
Query: 206 ----LLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNL--ERPFVYNR 253
+ + D + A + + + + + + H+ L ++P + R
Sbjct: 206 CPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIER 260
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 2e-09
Identities = 40/229 (17%), Positives = 69/229 (30%), Gaps = 30/229 (13%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLA--LAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA-- 99
VVLLH + G +A L ++ Y VYVP F G+ +
Sbjct: 22 DTGVVLLH--AYTGS-PNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWW 78
Query: 100 ECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157
+ + + K + G+S GG+ K E P + V S + +
Sbjct: 79 AESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVF-SSPILPGKHHLVPG 137
Query: 158 LERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAF-----VYKHILEKIH----LLW 208
+ + + A I Y L A L + +
Sbjct: 138 FLKYAE------YMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQ 191
Query: 209 GENDKIFDMQVARNLKEQVGQNA--TMESIEKAGH--LVNLERPFVYNR 253
D++ D ++A L++ + A + A H VN +
Sbjct: 192 AGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEED 240
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 9e-09
Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 4/137 (2%)
Query: 39 PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD-RPDRTAS 96
++ VL+H W L ++V D G + T
Sbjct: 4 AANAKQQKHFVLVHGGCLGA-WIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFR 62
Query: 97 FQAECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN 155
+E + + + + EK L+G S+GGM E YP+ + V ++M
Sbjct: 63 DYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLT 122
Query: 156 AALERIGYESWVDFLLP 172
E+ + D +L
Sbjct: 123 YPFEKYNEKCPADMMLD 139
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 6e-08
Identities = 31/236 (13%), Positives = 70/236 (29%), Gaps = 30/236 (12%)
Query: 36 IWVPKKTTKKH-AVVLLHPFGFDGILTWQFQVLA--LAKT-YEVYVPDFL--------FF 83
+ +PK +K +++H F + L + D F
Sbjct: 17 LDMPKNNPEKCPLCIIIHGFTGHSE-ERHIVAVQETLNEIGVATLRADMYGHGKSDGKFE 75
Query: 84 GSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
++ + +KL V + G S GG+ A M D++++++
Sbjct: 76 DHTLFKWLT-----NILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIP 130
Query: 143 TCSVMGLTESV--SNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200
+ E + E+ D L LK + + V +
Sbjct: 131 LSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIR-----VEDFV 185
Query: 201 LE---KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253
+ + ++ G+ D+ + + + +N + +I H + V
Sbjct: 186 DKYTKPVLIVHGDQDEAVPYEASVAF-SKQYKNCKLVTIPGDTHCYDHHLELVTEA 240
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 52.1 bits (124), Expect = 6e-08
Identities = 33/233 (14%), Positives = 72/233 (30%), Gaps = 25/233 (10%)
Query: 29 EPGTILNIWVPKKTTKKHAVVLLHPFGFDG-ILTWQFQVLALAKTYEVYVPDFLFFGSSV 87
+++P + +V + G G +L ++ +LA K + V + +
Sbjct: 158 VGRVRGTLFLPPEPGPFPGIVDMF--GTGGGLLEYRASLLA-GKGFAVMALAYYNYE--- 211
Query: 88 TDRPDRTASFQAECMAKGLRKLGVEKCT------LVGVSYGGMVGFKMAEMYPDLVESMV 141
D P + E + + L L+G+S GG + MA + ++V
Sbjct: 212 -DLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVV 270
Query: 142 VTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL 201
+ SV + ++ V+ K P +
Sbjct: 271 INGSVANVGGTLRY--KGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPV 328
Query: 202 EKIH----LLWGENDKI-----FDMQVARNLKEQVGQNATMESIEKAGHLVNL 245
E+ L G++D + + + L+ + + + GH +
Sbjct: 329 ERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEP 381
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-06
Identities = 46/240 (19%), Positives = 82/240 (34%), Gaps = 14/240 (5%)
Query: 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQ-FQVLA--LAKT-Y 73
GM T+E + ++ ++ H GF + +A L
Sbjct: 19 FQGMATITLERDGLQLVGTREEPFGEIYDMAIIFH--GFTANRNTSLLREIANSLRDENI 76
Query: 74 EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKM 129
DF G S + T + E L + V LVG + GG+V +
Sbjct: 77 ASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASML 136
Query: 130 AEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW-VDFLLPKTADALKVQFDIACYK 188
A +YPDL++ +V+ L + + Y + LP L + +
Sbjct: 137 AGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQ 196
Query: 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248
LP + + L+ G +D + ++ + + QN+T+ IE A H +
Sbjct: 197 LPIYEVS--AQFTKPVCLIHGTDDTVVSPNASKKYDQ-IYQNSTLHLIEGADHCFSDSYQ 253
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 2e-06
Identities = 46/246 (18%), Positives = 76/246 (30%), Gaps = 42/246 (17%)
Query: 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD-RPDRTASFQAE 100
+ VL+H G +W L ++V D G+ + RT
Sbjct: 2 KEGKHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTL 60
Query: 101 CMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159
+ + + L EK LVG S GGM E YP + + V + M + S+ LE
Sbjct: 61 PLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLE 120
Query: 160 RIGYESWVDFLL------------PKTADALKVQF--------------DIACYKLPTLP 193
+ + + L P T+ +F +A +
Sbjct: 121 QYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSS 180
Query: 194 AFVYKHILEKIHL-----------LWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHL 242
F+ K + DK + R + +G +E I+ A H+
Sbjct: 181 LFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIE-IKGADHM 239
Query: 243 VNLERP 248
L P
Sbjct: 240 AMLCEP 245
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 5e-06
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 44/248 (17%)
Query: 41 KTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ- 98
KKH VL+H W V + + + V D G + + +F
Sbjct: 9 PFVKKH-FVLVHAAFHGA-WCWYKIVALMRSSGHNVTALDLGASGINPKQ-ALQIPNFSD 65
Query: 99 -AECMAKGLRKL-GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA 156
+ + + L EK LVG + GG+ K E +P+ + V +M +
Sbjct: 66 YLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATT 125
Query: 157 ALERIGYESWVDFLLPKT------------------------ADALKVQFDIACYKLPTL 192
+ G T + +A + L
Sbjct: 126 VCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPL 185
Query: 193 PAFVYKHILEKIHL------------LWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240
++ + I +++ L + + + + + E+ + E IE +
Sbjct: 186 YLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKE-IEGSD 244
Query: 241 HLVNLERP 248
H+ + +P
Sbjct: 245 HVTMMSKP 252
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 6e-06
Identities = 31/231 (13%), Positives = 64/231 (27%), Gaps = 21/231 (9%)
Query: 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLA---LAKTYEVYVPDFL 81
I E G I T K H VV++ G D + T +++ + D
Sbjct: 172 EIPFEKGKITAHLHLTNTDKPHPVVIVSA-GLDSLQTDMWRLFRDHLAKHDIAMLTVDMP 230
Query: 82 FFGSSVTDRPDRTASFQAECMAKGLRKLG---VEKCTLVGVSYGGMVGFKMAEMYPDLVE 138
G S S + + L + + L+G +GG +++ + + ++
Sbjct: 231 SVGYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIK 290
Query: 139 SMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYK 198
+ V+ + + + + L A L + A+ K
Sbjct: 291 ACVILGAP------IHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLK 344
Query: 199 H----ILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 241
K + E D + + + + K
Sbjct: 345 VQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKTIT 395
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 7e-06
Identities = 13/100 (13%), Positives = 29/100 (29%), Gaps = 5/100 (5%)
Query: 43 TKKHAVVLLHPFGFDGILTWQFQVLAL--AKTYEVYVPDFLFFGSSVTDRPDRTASFQAE 100
+ ++L+ G G ++ + L Y F + +
Sbjct: 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFM---LNDTQVNTEYMVN 85
Query: 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140
+ G K ++ S GG+V +P + +
Sbjct: 86 AITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 125
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* Length = 316 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 9e-06
Identities = 13/100 (13%), Positives = 29/100 (29%), Gaps = 5/100 (5%)
Query: 43 TKKHAVVLLHPFGFDGILTWQFQVLAL--AKTYEVYVPDFLFFGSSVTDRPDRTASFQAE 100
+ ++L+ G G ++ + L Y F + +
Sbjct: 63 SVSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFM---LNDTQVNTEYMVN 119
Query: 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140
+ G K ++ S GG+V +P + +
Sbjct: 120 AITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 159
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 2e-05
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 6/107 (5%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ--AEC 101
VL+H W L ++V D G + SF +E
Sbjct: 3 FAHFVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQ-IEEIGSFDEYSEP 60
Query: 102 MAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147
+ L L EK LVG S GG+ A+ Y + + + V SV+
Sbjct: 61 LLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVL 107
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 6e-05
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 48 VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107
V+L+ + W L + Y Y+ D +G + + P A +A
Sbjct: 25 VLLVA----EEASRWPEA---LPEGYAFYLLDLPGYGRT--EGPRMAPEELAHFVAGFAV 75
Query: 108 KLGVEKCTLVGVSYGGMVGFKMAEM 132
+ + ++ G +G + +
Sbjct: 76 MMNLGAPWVLLRGLGLALGPHLEAL 100
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 9e-05
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 43 TKKHAVVLLHPFGFDGILTWQFQ-VLAL--AKTYEVYVPDFLFFGSSVTD-RPDRTASFQ 98
+KH VL+H W + + L + + V + G + T
Sbjct: 2 ERKHHFVLVHNAYHGA---WIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEY 58
Query: 99 AECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147
++ + + L+ L E+ LVG S+GG+ A+++P ++ +V + +
Sbjct: 59 SKPLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFL 108
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 1e-04
Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 9/93 (9%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-----YEVYVPDFLFFGSSVTDRPDRTASFQA 99
+ +L H F +V ALA+ + PDF + +
Sbjct: 4 RGHCILAHGFESG---PDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRL 60
Query: 100 ECMAKGLRKL-GVEKCTLVGVSYGGMVGFKMAE 131
+ + + R L G S G + +++
Sbjct: 61 QRLLEIARAATEKGPVVLAGSSLGSYIAAQVSL 93
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 40.4 bits (94), Expect = 3e-04
Identities = 27/229 (11%), Positives = 65/229 (28%), Gaps = 26/229 (11%)
Query: 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDG---ILTWQFQVLALAKTYEVYVPDFL 81
+ E + + + + ++++ G D L + Y V + D
Sbjct: 139 EVPFEGELLPGYAIISEDKAQDTLIVVG--GGDTSREDLFYMLGYSGWEHDYNVLMVDLP 196
Query: 82 FFGSSVTDRPDRTASFQAECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVES 139
G + +A ++ L EK + G S GG + E +++
Sbjct: 197 GQGKNPNQGLHFEVDARA-AISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDKR-IKA 254
Query: 140 MVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYK----------- 188
+ + + + E + + + K ++ ++ K
Sbjct: 255 WIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFI 314
Query: 189 --LPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNA 231
+ + KI L G + M+ ++ L + Q
Sbjct: 315 TSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRG 363
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 4e-04
Identities = 41/242 (16%), Positives = 66/242 (27%), Gaps = 44/242 (18%)
Query: 20 GMT--QRTIEIEP-GTILNIWV--PKKTTKKHAVVLLHPFGFDGI---LTWQFQVLALAK 71
GM +IEI L+ + P V+ +H G+ G + +
Sbjct: 1 GMEAKLSSIEIPVGQDELSGTLLTPTG---MPGVLFVH--GWGGSQHHSLVRAREAV-GL 54
Query: 72 TYEVYVPDFLFFGSSVTDRPDRTASFQAECM--------AKGLRKLGVEKCTLVGVSYGG 123
D G ++ + L + +VG+SYGG
Sbjct: 55 GCICMTFDL--RGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGG 112
Query: 124 MVGFKMAEMYPD--LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQ 181
+ + P L + + + + L P AL
Sbjct: 113 YLSALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLAL--- 169
Query: 182 FDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES--IEKA 239
A YK L + + END I V RN + ++ S I A
Sbjct: 170 AACAQYKGDVL-------L---VE---AENDVIVPHPVMRNYADAFTNARSLTSRVIAGA 216
Query: 240 GH 241
H
Sbjct: 217 DH 218
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 5e-04
Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 28/239 (11%)
Query: 16 LKLVGMTQRTIEIE-PGTILNIWV--PKKTTKKHAVVLLHPFGFDGILT--WQFQVLALA 70
L+ E+ G + ++V P+ AV++L G + +Q + L L
Sbjct: 120 APLLSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLG--GLESTKEESFQMENLVLD 177
Query: 71 KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA----KGLRKLGVEKCTLVGVSYGGMVG 126
+ D G + + L + + ++G S GG
Sbjct: 178 RGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYA 237
Query: 127 FKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC 186
K A P L + +S + Y L ++ + +
Sbjct: 238 LKSAACEPRL-------AAC------ISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEE 284
Query: 187 YKLPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 241
+L A + +L +I +L G +D++ V L+ ++ + + H
Sbjct: 285 ARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDGDH 343
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 39.7 bits (92), Expect = 7e-04
Identities = 29/256 (11%), Positives = 61/256 (23%), Gaps = 42/256 (16%)
Query: 25 TIEIEPGTILNIW--VPKKTTKKH-AVVLLHPFG---------------FDGILTWQFQV 66
P + +P K A++ + G +
Sbjct: 96 EFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLT 155
Query: 67 LA--LAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123
A K Y D G + +D T + L + L SY
Sbjct: 156 QALNFVKEGYIAVAVDNPAAGEA-SDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLD 214
Query: 124 MVGFKMAEMYPDLVES--MVVTCSVMGLTESVSNAALERI----------GYESWVDFLL 171
M + + + +V S+ V I + + +
Sbjct: 215 MQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDTSIYAFVYNDFLCQTQERAEVMT 274
Query: 172 PKTADALKVQFDIACYKLPTLPAFV-YKHILEKI---HLLW--GENDKIFDMQVARNLKE 225
+ + + + +P + I+ + ++ G D+ D + R
Sbjct: 275 MPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRPIILTEGGLDRDLD--LVRKAYA 332
Query: 226 QVGQNATMESIEKAGH 241
VG ++
Sbjct: 333 IVGTPDNVKIYHYKKF 348
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 270 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 100.0 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 100.0 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 100.0 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 100.0 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 100.0 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.98 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.98 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.97 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.97 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.97 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.97 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.97 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.97 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.97 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.97 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.97 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.97 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.97 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.96 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.96 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.96 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.96 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.96 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.96 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.96 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.96 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.96 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.96 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.96 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.96 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.96 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.95 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.95 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.95 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.95 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.95 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.95 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.95 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.95 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.95 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.95 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.95 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.95 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.95 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.95 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.95 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.95 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.94 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.94 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.94 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.94 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.94 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.94 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.94 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.94 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.94 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.94 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.93 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.93 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.93 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.93 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.93 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.93 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.93 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.93 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.93 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.93 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.93 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.93 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.92 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.92 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.92 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.92 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.92 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.92 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.92 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.92 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.91 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.91 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.91 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.91 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.91 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.91 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.91 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.9 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.9 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.9 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.9 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.9 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.9 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.89 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.89 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.89 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.89 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.88 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.88 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.88 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.87 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.87 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.87 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.87 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.87 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.87 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.87 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.87 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.86 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.85 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.85 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.85 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.84 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.84 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.84 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.83 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.82 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.81 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.81 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.79 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.79 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.79 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.79 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.78 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.77 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.77 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.76 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.76 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.75 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.74 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.73 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.73 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.72 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.71 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.71 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.69 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.68 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.68 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.67 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.59 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.58 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.57 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.57 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.53 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.41 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 99.34 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.32 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.24 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.2 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 99.18 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 99.15 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.07 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 99.06 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.04 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.99 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.99 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.89 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.81 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.8 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.74 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.68 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.64 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.62 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.58 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.53 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.51 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.51 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.49 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.46 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.45 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.42 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 98.14 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.96 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.92 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.91 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.71 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.62 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 97.41 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.19 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 97.05 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.98 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.93 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.93 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 96.93 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.92 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.91 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.7 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.65 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.65 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.6 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.51 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 96.31 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.58 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 92.94 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 87.67 | |
| 3im8_A | 307 | Malonyl acyl carrier protein transacylase; fatty a | 80.24 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=250.51 Aligned_cols=234 Identities=18% Similarity=0.197 Sum_probs=177.2
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
..++...||.+++|...++ +++|+||++||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+.+++|+
T Consensus 6 ~~~~~~~~g~~l~y~~~G~-~~~p~lvl~hG~~~~~~-~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~a~dl 83 (266)
T 3om8_A 6 LSFLATSDGASLAYRLDGA-AEKPLLALSNSIGTTLH-MWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDV 83 (266)
T ss_dssp CEEEECTTSCEEEEEEESC-TTSCEEEEECCTTCCGG-GGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHHHHHH
T ss_pred ceEEeccCCcEEEEEecCC-CCCCEEEEeCCCccCHH-HHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHHHHHH
Confidence 4455666999999998876 45789999999999999 999999999989999999999999999877779999999999
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-hHhhhh----ccchhh-----hhhcc-
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-NAALER----IGYESW-----VDFLL- 171 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-~~~~~~----~~~~~~-----~~~~~- 171 (270)
.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... ...... ...... ...+.
T Consensus 84 ~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (266)
T 3om8_A 84 LELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPP 163 (266)
T ss_dssp HHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSHHHHHHHHHHHSCH
T ss_pred HHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHHHHHHHHHHHhcCh
Confidence 9999999999999999999999999999999999999999987654322110 000000 000000 00000
Q ss_pred ------cccHHHHHHHHHhh---------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEe
Q 024228 172 ------PKTADALKVQFDIA---------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESI 236 (270)
Q Consensus 172 ------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
+.....+....... ...........+.++.+|+|+|+|++|.++|++.++.+.+.++ +++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip-~a~~~~i 242 (266)
T 3om8_A 164 ALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIA-GARLVTL 242 (266)
T ss_dssp HHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST-TCEEEEE
T ss_pred hhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCEEEEe
Confidence 00001111110000 0000111123356667999999999999999999999999998 9999999
Q ss_pred cCCCcceeecchHhHHHHHHHHHH
Q 024228 237 EKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 237 ~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+ +||++++|+|+++++.|.+||+
T Consensus 243 ~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 243 P-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp S-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred C-CCCCccccCHHHHHHHHHHHhc
Confidence 8 7999999999999999999985
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=242.05 Aligned_cols=235 Identities=17% Similarity=0.184 Sum_probs=175.0
Q ss_pred EEEeecCCeEEEEEecCCCC-CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTT-KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
.++++ +|.+++|...++.. ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+++++|+
T Consensus 5 ~~~~~-~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 82 (266)
T 2xua_A 5 PYAAV-NGTELHYRIDGERHGNAPWIVLSNSLGTDLS-MWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDV 82 (266)
T ss_dssp CEEEC-SSSEEEEEEESCSSSCCCEEEEECCTTCCGG-GGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHH
T ss_pred CeEEE-CCEEEEEEEcCCccCCCCeEEEecCccCCHH-HHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHHHHHH
Confidence 34556 79999998887522 2789999999999999 999999999888999999999999999776678999999999
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-hHh---hhhccchhh-----hhhccc-
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-NAA---LERIGYESW-----VDFLLP- 172 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-~~~---~~~~~~~~~-----~~~~~~- 172 (270)
.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... ... ......... ...+..
T Consensus 83 ~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (266)
T 2xua_A 83 LGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADAVLPRWFTAD 162 (266)
T ss_dssp HHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHHHHHHHHSCHH
T ss_pred HHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHHcCcc
Confidence 9999999999999999999999999999999999999999998764322110 000 000000000 000000
Q ss_pred ------ccHHHHHHHHHh---------hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEec
Q 024228 173 ------KTADALKVQFDI---------ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIE 237 (270)
Q Consensus 173 ------~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (270)
.....+...+.. ............+.++.+|+|+++|++|.++|++.++.+.+.++ +.++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~ 241 (266)
T 2xua_A 163 YMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIA-GARYVELD 241 (266)
T ss_dssp HHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST-TCEEEEES
T ss_pred cccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCC-CCEEEEec
Confidence 000001000000 00000011123455667999999999999999999999999998 89999999
Q ss_pred CCCcceeecchHhHHHHHHHHHHhh
Q 024228 238 KAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 238 ~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+||+++.|+|+++++.|.+||++.
T Consensus 242 -~gH~~~~e~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 242 -ASHISNIERADAFTKTVVDFLTEQ 265 (266)
T ss_dssp -CCSSHHHHTHHHHHHHHHHHHTC-
T ss_pred -CCCCchhcCHHHHHHHHHHHHHhc
Confidence 999999999999999999999754
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-39 Score=247.91 Aligned_cols=254 Identities=15% Similarity=0.150 Sum_probs=180.1
Q ss_pred CcceEeeehhhhhhhcccCCceeEEEeecCC----eEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceE
Q 024228 1 MVNIITIYKLLLHGLLKLVGMTQRTIEIEPG----TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEV 75 (270)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g----~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v 75 (270)
|++.+............ ..++.+++++ +| .+++|...++..++|+|||+||++++.. .|..+++.|+++ |+|
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rv 77 (310)
T 1b6g_A 1 MVNAIRTPDQRFSNLDQ-YPFSPNYLDD-LPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSY-LYRKMIPVFAESGARV 77 (310)
T ss_dssp CCCEECCCGGGGSSCSS-CCCCCEEEES-CTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEE
T ss_pred CcccccCchhhcCcccc-CCCCceEEEe-cCCccceEEEEEEeCCCCCCCEEEEECCCCCchh-hHHHHHHHHHhCCCeE
Confidence 45555443333222222 3456677887 56 9999988775222789999999999999 999999999998 999
Q ss_pred EeecCCCCCCCCCCC--CCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC--CCc
Q 024228 76 YVPDFLFFGSSVTDR--PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG--LTE 151 (270)
Q Consensus 76 ~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~--~~~ 151 (270)
+++|+||||.|+.+. ..++.+.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++... ...
T Consensus 78 ia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~ 157 (310)
T 1b6g_A 78 IAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVT 157 (310)
T ss_dssp EEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTT
T ss_pred EEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCcc
Confidence 999999999998765 3589999999999999999999999999999999999999999999999999998542 110
Q ss_pred ---------hhh---hHhhhhc--c--ch--hhh----hhccc-------------ccHHHHHHHHHhhhhcCCC-----
Q 024228 152 ---------SVS---NAALERI--G--YE--SWV----DFLLP-------------KTADALKVQFDIACYKLPT----- 191 (270)
Q Consensus 152 ---------~~~---~~~~~~~--~--~~--~~~----~~~~~-------------~~~~~~~~~~~~~~~~~~~----- 191 (270)
... ....... . .. ... ..... ........+.... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 236 (310)
T 1b6g_A 158 QPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMV-AQRDQAXIDI 236 (310)
T ss_dssp CTHHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHH-HSCCHHHHHH
T ss_pred ccchhhhhhccchHHHHHHHHhccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHh-cccccchhhh
Confidence 000 0000000 0 00 000 00000 0000000000000 00000
Q ss_pred --Chhhhhh-hhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEe--cCCCcceeecchHhHHHHHHHHHHh
Q 024228 192 --LPAFVYK-HILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESI--EKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 192 --~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
.....+. .+.+|+|+|+|++|.++| +..+.+.+.++ +.+++++ +++||++++ +|+++++.|.+||++
T Consensus 237 ~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip-~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 237 STEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALI-NGCPEPLEIADAGHFVQE-FGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHS-TTCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHH
T ss_pred hhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhcc-cccceeeecCCcccchhh-ChHHHHHHHHHHHhc
Confidence 0112344 677999999999999999 88899999998 8888877 999999999 999999999999975
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=246.79 Aligned_cols=242 Identities=14% Similarity=0.172 Sum_probs=176.0
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAE 100 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 100 (270)
++..++.+ +|.+++|...|+ +++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+.+++
T Consensus 7 ~~~~~~~~-~g~~l~y~~~G~-g~~~pvvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~a~ 83 (316)
T 3afi_E 7 IEIRRAPV-LGSSMAYRETGA-QDAPVVLFLHGNPTSSH-IWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDHVR 83 (316)
T ss_dssp ---CEEEE-TTEEEEEEEESC-TTSCEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHH
T ss_pred ccceeEEe-CCEEEEEEEeCC-CCCCeEEEECCCCCchH-HHHHHHHHHhhCCEEEEECCCCCCCCCCCCCCCCHHHHHH
Confidence 34456666 799999998876 22349999999999999 9999999999889999999999999987666789999999
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC--chhh--------------hHhhhhccch
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT--ESVS--------------NAALERIGYE 164 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~--~~~~--------------~~~~~~~~~~ 164 (270)
|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..+.. .... ..........
T Consensus 84 dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (316)
T 3afi_E 84 YLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTP 163 (316)
T ss_dssp HHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999743210 0000 0000000000
Q ss_pred -----------hhhhhccc-----c-cHHHHHHHHHh-----------hhhcCCC---C----------hhhhhhhhhee
Q 024228 165 -----------SWVDFLLP-----K-TADALKVQFDI-----------ACYKLPT---L----------PAFVYKHILEK 203 (270)
Q Consensus 165 -----------~~~~~~~~-----~-~~~~~~~~~~~-----------~~~~~~~---~----------~~~~~~~~~~P 203 (270)
.......+ . ........... ....... . ....+.++.+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 243 (316)
T 3afi_E 164 GEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYP 243 (316)
T ss_dssp THHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSC
T ss_pred chhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccCCC
Confidence 00000000 0 00001111000 0000000 0 01122345699
Q ss_pred eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhc
Q 024228 204 IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHAN 266 (270)
Q Consensus 204 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 266 (270)
+|+|+|++|.++|.+..+.+.+.++ ++++++++++||+++.|+|+++++.|.+||++.....
T Consensus 244 ~Lvi~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~~~~ 305 (316)
T 3afi_E 244 KLLFTGEPGALVSPEFAERFAASLT-RCALIRLGAGLHYLQEDHADAIGRSVAGWIAGIEAVR 305 (316)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHSS-SEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred eEEEecCCCCccCHHHHHHHHHhCC-CCeEEEcCCCCCCchhhCHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999998 8999999999999999999999999999998776543
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=239.24 Aligned_cols=226 Identities=21% Similarity=0.298 Sum_probs=168.7
Q ss_pred EEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhCC
Q 024228 34 LNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLGV 111 (270)
Q Consensus 34 l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~~ 111 (270)
|+|...++ .+++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+. ..++.+++++|+.+++++++.
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~ 81 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSGS-YWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGI 81 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCGG-GGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccHH-HHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHcCC
Confidence 45555554 245799999999999999 999999999988999999999999998654 458999999999999999999
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh------hhccchhhh----hhccc-----ccHH
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL------ERIGYESWV----DFLLP-----KTAD 176 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~~-----~~~~ 176 (270)
++++|+||||||.+++.+|.++|++|+++|++++............. ......... ....+ ....
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP 161 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHH
T ss_pred CCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccc
Confidence 99999999999999999999999999999999986543321110000 000000000 00000 0000
Q ss_pred HH-----------------HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCC
Q 024228 177 AL-----------------KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 239 (270)
Q Consensus 177 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (270)
.. ...+.... .......+.++.+|+|+|+|++|.++|.+.++.+.+.++ +.++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p-~~~~~~~~~~ 237 (268)
T 3v48_A 162 RLEAEDALALAHFQGKNNLLRRLNALK---RADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALP-DSQKMVMPYG 237 (268)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHH---HCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCS-SEEEEEESSC
T ss_pred cchhhHHHHHhhcCchhHHHHHHHHHh---ccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCC-cCeEEEeCCC
Confidence 00 00000000 001123355666999999999999999999999999998 8999999999
Q ss_pred CcceeecchHhHHHHHHHHHHhhhh
Q 024228 240 GHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 240 gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
||+++.|+|+++++.|.+||++...
T Consensus 238 GH~~~~e~p~~~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 238 GHACNVTDPETFNALLLNGLASLLH 262 (268)
T ss_dssp CTTHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CcchhhcCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999987643
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=240.47 Aligned_cols=235 Identities=20% Similarity=0.271 Sum_probs=171.1
Q ss_pred cCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-----C
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-----D 92 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-----~ 92 (270)
.++++...+.+ +|.+++|...|. +|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+ . .
T Consensus 6 ~~~~~~~~~~~-~g~~l~y~~~G~---g~~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~-~~~~~~~ 79 (294)
T 1ehy_A 6 PEDFKHYEVQL-PDVKIHYVREGA---GPTLLLLHGWPGFWW-EWSKVIGPLAEHYDVIVPDLRGFGDSEKP-DLNDLSK 79 (294)
T ss_dssp GGGSCEEEEEC-SSCEEEEEEEEC---SSEEEEECCSSCCGG-GGHHHHHHHHTTSEEEEECCTTSTTSCCC-CTTCGGG
T ss_pred CCCcceeEEEE-CCEEEEEEEcCC---CCEEEEECCCCcchh-hHHHHHHHHhhcCEEEecCCCCCCCCCCC-ccccccC
Confidence 34556667776 799999988774 789999999999999 99999999998899999999999999976 4 5
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc-hhh--------hH-hhhh--
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE-SVS--------NA-ALER-- 160 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~-~~~--------~~-~~~~-- 160 (270)
++.+.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... ... .. ....
T Consensus 80 ~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T 1ehy_A 80 YSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 159 (294)
T ss_dssp GCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred cCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcc
Confidence 89999999999999999999999999999999999999999999999999997432111 000 00 0000
Q ss_pred c------c--------chhhhhh-cc-ccc--HHHHHHHHHhh---------------hhcC--CCChhhhhhhhheeee
Q 024228 161 I------G--------YESWVDF-LL-PKT--ADALKVQFDIA---------------CYKL--PTLPAFVYKHILEKIH 205 (270)
Q Consensus 161 ~------~--------~~~~~~~-~~-~~~--~~~~~~~~~~~---------------~~~~--~~~~~~~~~~~~~P~l 205 (270)
. . ....... .. ... ......+.... .... .......+..+.+|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 239 (294)
T 1ehy_A 160 MAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVT 239 (294)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEE
T ss_pred hhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEE
Confidence 0 0 0000000 00 000 00011110000 0000 0000112335679999
Q ss_pred EEEcCCCccCC-HHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 206 LLWGENDKIFD-MQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 206 ~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
+|+|++|.++| .+..+.+.+.++ ++++++++++||+++.|+|+++++.|.+||
T Consensus 240 vi~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 240 MIWGLGDTCVPYAPLIEFVPKYYS-NYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp EEEECCSSCCTTHHHHHHHHHHBS-SEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred EEEeCCCCCcchHHHHHHHHHHcC-CCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 99999999998 467778888887 899999999999999999999999999997
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=234.37 Aligned_cols=235 Identities=18% Similarity=0.159 Sum_probs=171.9
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCc-ccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCC---h
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFD-GILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT---A 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~-~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~---~ 95 (270)
++..++.+ +|.+++|...++ ++++||++||++++ .. .|..+++.|.++ |+|+++|+||||.|+.....++ .
T Consensus 2 ~~~~~~~~-~g~~l~~~~~g~--~~~~vvllHG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 77 (254)
T 2ocg_A 2 VTSAKVAV-NGVQLHYQQTGE--GDHAVLLLPGMLGSGET-DFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFF 77 (254)
T ss_dssp CEEEEEEE-TTEEEEEEEEEC--CSEEEEEECCTTCCHHH-HCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHH
T ss_pred CceeEEEE-CCEEEEEEEecC--CCCeEEEECCCCCCCcc-chHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHH
Confidence 45566777 799999988765 34689999999888 55 789999999988 9999999999999986655556 6
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhh----h----
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW----V---- 167 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~---- 167 (270)
++.++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..................... .
T Consensus 78 ~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (254)
T 2ocg_A 78 ERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLE 157 (254)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhHHHHH
Confidence 77789999999999999999999999999999999999999999999988654332111100000000000 0
Q ss_pred hhcccccHH-HHHHHHHhh--hhc--CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcc
Q 024228 168 DFLLPKTAD-ALKVQFDIA--CYK--LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHL 242 (270)
Q Consensus 168 ~~~~~~~~~-~~~~~~~~~--~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 242 (270)
......... ....+.... ... ........+.++.+|+|+++|++|.++|.+.++.+.+.++ +.++++++++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 236 (254)
T 2ocg_A 158 ALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK-GSRLHLMPEGKHN 236 (254)
T ss_dssp HHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST-TCEEEEETTCCTT
T ss_pred HHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCC-CCEEEEcCCCCCc
Confidence 000000000 000111000 000 0111233456677999999999999999999999999988 8999999999999
Q ss_pred eeecchHhHHHHHHHHHH
Q 024228 243 VNLERPFVYNRQLKTILA 260 (270)
Q Consensus 243 ~~~~~~~~~~~~i~~fl~ 260 (270)
++.++|+++++.|.+||+
T Consensus 237 ~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 237 LHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp HHHHTHHHHHHHHHHHHC
T ss_pred hhhhCHHHHHHHHHHHhC
Confidence 999999999999999983
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=238.10 Aligned_cols=227 Identities=17% Similarity=0.161 Sum_probs=167.9
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHHHHHHHHHHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLRK 108 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~l~~ 108 (270)
.+.+++|...|+ +++|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+.. .++.+.+++|+.+++++
T Consensus 4 ~~~~~~y~~~G~---g~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~ 79 (269)
T 2xmz_A 4 THYKFYEANVET---NQVLVFLHGFLSDSR-TYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDK 79 (269)
T ss_dssp CSEEEECCSSCC---SEEEEEECCTTCCGG-GGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGG
T ss_pred ccceEEEEEcCC---CCeEEEEcCCCCcHH-HHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH
Confidence 367788877665 568999999999999 9999999999889999999999999997655 67999999999999999
Q ss_pred hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--H------hhhh---ccchhhhh------hcc
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--A------ALER---IGYESWVD------FLL 171 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~------~~~~---~~~~~~~~------~~~ 171 (270)
++.++++|+||||||.+|+.+|.++|++|+++|++++.......... . .... ........ .+.
T Consensus 80 l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (269)
T 2xmz_A 80 YKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQ 159 (269)
T ss_dssp GTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGG
T ss_pred cCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999976543221100 0 0000 00000000 000
Q ss_pred c---ccHHHHHHH---------------HHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceE
Q 024228 172 P---KTADALKVQ---------------FDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATM 233 (270)
Q Consensus 172 ~---~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 233 (270)
. ......... +..............+.++.+|+++++|++|.+++.+..+ +.+.++ ++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~-~~~~ 237 (269)
T 2xmz_A 160 SQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIP-NSKC 237 (269)
T ss_dssp GGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHST-TEEE
T ss_pred ccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCC-CcEE
Confidence 0 000000000 0000001111122345667799999999999999887755 777787 8999
Q ss_pred EEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 234 ESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++++++||+++.|+|+++++.|.+||++.
T Consensus 238 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 238 KLISATGHTIHVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp EEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCChhhcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999864
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=238.68 Aligned_cols=234 Identities=17% Similarity=0.188 Sum_probs=173.5
Q ss_pred eEEEeecC-C---eEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHH-HHhhccceEEeecCCCCCCCCCCCC-CC
Q 024228 23 QRTIEIEP-G---TILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQV-LALAKTYEVYVPDFLFFGSSVTDRP-DR 93 (270)
Q Consensus 23 ~~~i~~~~-g---~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~-~~l~~~~~v~~~d~~g~G~s~~~~~-~~ 93 (270)
.+++++.+ | .+++|...++ +++|||+||++ ++.. .|..++ +.|+++|+|+++|+||||.|+.+.. .+
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G~---g~~vvllHG~~~~~~~~~-~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~ 85 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAGN---GETVIMLHGGGPGAGGWS-NYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQ 85 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEECC---SSEEEEECCCSTTCCHHH-HHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSC
T ss_pred ceEEEecCCCcceEEEEEEecCC---CCcEEEECCCCCCCCcHH-HHHHHHHHHHhccCEEEEECCCCCCCCCCCCCcCc
Confidence 45677732 7 9999988775 68999999997 6766 899999 9998889999999999999997665 57
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc-----h--hhhHhhhh---cc-
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE-----S--VSNAALER---IG- 162 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~-----~--~~~~~~~~---~~- 162 (270)
+.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... . ........ ..
T Consensus 86 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (286)
T 2puj_A 86 RGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSY 165 (286)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcH
Confidence 8999999999999999999999999999999999999999999999999998653210 0 00000000 00
Q ss_pred --chhhhhhc-c-cc--cHHHH--------------HHHHHhhhhc--CCCChhhhhhhhheeeeEEEcCCCccCCHHHH
Q 024228 163 --YESWVDFL-L-PK--TADAL--------------KVQFDIACYK--LPTLPAFVYKHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 163 --~~~~~~~~-~-~~--~~~~~--------------~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
........ . +. ..... .......... ..+.....+.++.+|+|+|+|++|.++|++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~ 245 (286)
T 2puj_A 166 ETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHG 245 (286)
T ss_dssp HHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHH
T ss_pred HHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHH
Confidence 00000000 0 00 00000 0011000000 01112334566779999999999999999999
Q ss_pred HHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 221 RNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+.+.+.++ ++++++++++||+++.|+|+++++.|.+||++
T Consensus 246 ~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 246 LKLLWNID-DARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp HHHHHHSS-SEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHCC-CCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 99999998 89999999999999999999999999999974
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=239.11 Aligned_cols=232 Identities=16% Similarity=0.146 Sum_probs=169.8
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
++...+|.+++|...++ .++++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+...++.+.+++|+.
T Consensus 3 ~~~~~~g~~l~y~~~g~-~~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~ 80 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGP-RDAPVIHFHHGWPLSAD-DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDVA 80 (276)
T ss_dssp EEECTTSCEEEEEEESC-TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEECCCCcEEEEEecCC-CCCCeEEEECCCCcchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 45666899999988774 24689999999999999 999999999987 9999999999999987666689999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCc-----------hhhhHhhhhcc------chh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTE-----------SVSNAALERIG------YES 165 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~-----------~~~~~~~~~~~------~~~ 165 (270)
+++++++.++++|+||||||.+++.+|+++ |++|+++|++++..+... ........... ...
T Consensus 81 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T 1zoi_A 81 AVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRD 160 (276)
T ss_dssp HHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHHHHHHH
Confidence 999999999999999999999999988887 999999999997542210 00000000000 000
Q ss_pred hhh-hccc-------ccHHHHHHHHHh------------h-hhcCCCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHH
Q 024228 166 WVD-FLLP-------KTADALKVQFDI------------A-CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNL 223 (270)
Q Consensus 166 ~~~-~~~~-------~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~ 223 (270)
... .+.. ............ . ... .......+.++.+|+|+++|++|.++|.+ ..+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~ 239 (276)
T 1zoi_A 161 VPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFS-QTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLS 239 (276)
T ss_dssp HHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH-SCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred hhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhc-ccchhhhccccCCCEEEEEcCCCcccChHHHHHHH
Confidence 000 0000 000111111000 0 000 11122345566799999999999999987 45566
Q ss_pred HHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 224 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+.++ ++++++++++||+++.++|+++++.|.+||+
T Consensus 240 ~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 240 AKLLP-NGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp HHHST-TEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HhhCC-CceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 66676 8999999999999999999999999999995
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=238.62 Aligned_cols=236 Identities=19% Similarity=0.285 Sum_probs=171.0
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCccc--ccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGI--LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQA 99 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~ 99 (270)
.+++.+ +|.+++|...|. +++|||+||++.+.. ..|..+++.|+++|+|+++|+||||.|+.+.. .++.+.++
T Consensus 7 ~~~~~~-~g~~l~y~~~G~---g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a 82 (282)
T 1iup_A 7 GKSILA-AGVLTNYHDVGE---GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWV 82 (282)
T ss_dssp CEEEEE-TTEEEEEEEECC---SSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHH
T ss_pred cceEEE-CCEEEEEEecCC---CCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCCCHHHHH
Confidence 456666 799999988774 678999999875443 26777788897779999999999999987653 58999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch--hhhHhhhh----ccchhhhhhc-c-
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES--VSNAALER----IGYESWVDFL-L- 171 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~-~- 171 (270)
+|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... ........ .......... .
T Consensus 83 ~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T 1iup_A 83 DHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYD 162 (282)
T ss_dssp HHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999986542110 00000000 0000000000 0
Q ss_pred cc--cHHHHHHH------------HHhhhhc-------CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC
Q 024228 172 PK--TADALKVQ------------FDIACYK-------LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN 230 (270)
Q Consensus 172 ~~--~~~~~~~~------------~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 230 (270)
.. ........ +...... ........+.++.+|+|+++|++|.++|.+.++.+.+.++ +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~-~ 241 (282)
T 1iup_A 163 RSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELID-R 241 (282)
T ss_dssp GGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT-T
T ss_pred cccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCC-C
Confidence 00 00000000 0000000 0000113455666999999999999999999999999998 8
Q ss_pred ceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 231 ATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 231 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
+++++++++||+++.|+|+++++.|.+||++..
T Consensus 242 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 274 (282)
T 1iup_A 242 AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEAN 274 (282)
T ss_dssp EEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC-
T ss_pred CeEEEECCCCCCccccCHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999998744
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=235.31 Aligned_cols=239 Identities=14% Similarity=0.145 Sum_probs=172.9
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC--CCCChH
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTAS 96 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~ 96 (270)
..++...+...+|.+++|...++..++++|||+||++++.. .|..+++.|+++|+|+++|+||||.|+... ..++.+
T Consensus 3 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 81 (285)
T 3bwx_A 3 AEYEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNAR-DFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPM 81 (285)
T ss_dssp CSSEEEEEECTTSCEEEEEEECBCTTSCCEEEECCTTCCGG-GGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGCSHH
T ss_pred CccccCeeecCCCceEEEEEcCCCCCCCcEEEECCCCcchh-hHHHHHHHhhcCCEEEeecCCCCCCCCCCCCccccCHH
Confidence 34556667777999999988876444789999999999998 999999999988999999999999998653 347899
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc-------cch----h
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-------GYE----S 165 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~-------~~~----~ 165 (270)
.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++................ ... .
T Consensus 82 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (285)
T 3bwx_A 82 QYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARA 161 (285)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHHHH
Confidence 99999999999999999999999999999999999999999999998754332211110000000 000 0
Q ss_pred hhh----hcccccHHHHHHHHHhhh---------------hcCC----------CChhhhhhhh-heeeeEEEcCCCccC
Q 024228 166 WVD----FLLPKTADALKVQFDIAC---------------YKLP----------TLPAFVYKHI-LEKIHLLWGENDKIF 215 (270)
Q Consensus 166 ~~~----~~~~~~~~~~~~~~~~~~---------------~~~~----------~~~~~~~~~~-~~P~l~i~g~~D~~~ 215 (270)
... .+................ .... ......+..+ .+|+|+|+|++|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~ 241 (285)
T 3bwx_A 162 LQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDIL 241 (285)
T ss_dssp HHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCSSS
T ss_pred HHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCCcc
Confidence 000 000000111111111000 0000 0001123334 599999999999999
Q ss_pred CHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 216 DMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+++..+.+.+. + ++++++++++||+++.++|+.+ ..|.+||++
T Consensus 242 ~~~~~~~~~~~-~-~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 242 SAQTAAKMASR-P-GVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp CHHHHHHHHTS-T-TEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred CHHHHHHHHhC-C-CcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 99999999888 6 9999999999999999999987 579999965
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=239.93 Aligned_cols=228 Identities=20% Similarity=0.192 Sum_probs=170.0
Q ss_pred cCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 29 EPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
.+|.+++|...++ +++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+...++.+.+++|+.++++
T Consensus 10 ~~g~~l~y~~~g~---g~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~ 85 (277)
T 1brt_A 10 STSIDLYYEDHGT---GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLE 85 (277)
T ss_dssp TEEEEEEEEEECS---SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEcCC---CCeEEEECCCCCcHH-HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 3788999988774 567999999999999 999999999987 99999999999999977667899999999999999
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCcc-ccccEEEecccCCCCch--------hhhHhh----hhcc------chhhhh
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVMGLTES--------VSNAAL----ERIG------YESWVD 168 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~~~~~~--------~~~~~~----~~~~------~~~~~~ 168 (270)
+++.++++|+||||||.+++.+|.++|+ +|+++|++++..+.... ...... .... ......
T Consensus 86 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (277)
T 1brt_A 86 TLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFN 165 (277)
T ss_dssp HHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHH
Confidence 9999999999999999999999999998 99999999975432100 000000 0000 000000
Q ss_pred -hcc-------cccHHHHHHHHHhh-----------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHH-HHHHHHhc
Q 024228 169 -FLL-------PKTADALKVQFDIA-----------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA-RNLKEQVG 228 (270)
Q Consensus 169 -~~~-------~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~ 228 (270)
.+. .............. ...........+.++.+|+|+++|++|.++|.+.+ +.+.+.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 245 (277)
T 1brt_A 166 DFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP 245 (277)
T ss_dssp HHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCT
T ss_pred HHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCC
Confidence 000 00011111111000 00001112234566679999999999999998887 88888887
Q ss_pred CCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 229 QNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 229 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++++++++||+++.++|+++++.|.+||++
T Consensus 246 -~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 246 -SAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp -TSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred -CCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999963
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=237.26 Aligned_cols=232 Identities=19% Similarity=0.162 Sum_probs=166.0
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
++.+.||.+++|...++ +++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+...++.+.+++|+.
T Consensus 2 ~~~~~~g~~l~y~~~G~---g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d~~ 77 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWGS---GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIA 77 (271)
T ss_dssp EEECTTSCEEEEEEESS---SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEEcCCCCEEEEEccCC---CCeEEEECCCCCcHH-HHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHHHH
Confidence 45667999999998875 688999999999999 999999999876 9999999999999998777789999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCch-------hhhHhhhhcc----------chh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTES-------VSNAALERIG----------YES 165 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~~-------~~~~~~~~~~----------~~~ 165 (270)
+++++++.++++|+||||||.+++.++++ .|++|+++|++++..+.... .......... ...
T Consensus 78 ~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (271)
T 3ia2_A 78 QLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISD 157 (271)
T ss_dssp HHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999877666655 48999999999876432110 0000000000 000
Q ss_pred hh-hhccc-----ccHHHHHHHHHh------------hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHH-HHHHH
Q 024228 166 WV-DFLLP-----KTADALKVQFDI------------ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVAR-NLKEQ 226 (270)
Q Consensus 166 ~~-~~~~~-----~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~-~~~~~ 226 (270)
.. ..... ............ ............+.++.+|+|+|+|++|.++|++... .+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~ 237 (271)
T 3ia2_A 158 FNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAEL 237 (271)
T ss_dssp HHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHH
T ss_pred hhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHh
Confidence 00 00000 000000000000 0000001112234556699999999999999988744 44555
Q ss_pred hcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 227 VGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 227 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 238 ~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 238 IK-GAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp ST-TCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CC-CceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 55 89999999999999999999999999999963
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=238.38 Aligned_cols=232 Identities=16% Similarity=0.103 Sum_probs=169.4
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCC-CCC--CCChHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVT-DRP--DRTASFQAEC 101 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~-~~~--~~~~~~~~~~ 101 (270)
++.+ +|.+++|...++ +++|+|||+||++++....|..+++.|+++|+|+++|+||||.|+. +.. .++.+.+++|
T Consensus 7 ~~~~-~g~~l~~~~~G~-~~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~d 84 (286)
T 2yys_A 7 YVPV-GEAELYVEDVGP-VEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALVED 84 (286)
T ss_dssp EEEC-SSCEEEEEEESC-TTSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHHHH
T ss_pred EEeE-CCEEEEEEeecC-CCCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCcHHHHHHH
Confidence 4444 799999988875 3478999999999887524999999997779999999999999997 544 6899999999
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh---------------hhh-c---c
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA---------------LER-I---G 162 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~---------------~~~-~---~ 162 (270)
+.+++++++.++++|+||||||.+|+.+|.++|+ |+++|++++....... .... ... . .
T Consensus 85 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T 2yys_A 85 TLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWL-AARLAEAAGLAPLPDPEENLKEALKREE 162 (286)
T ss_dssp HHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHH-HHHHHHHTTCCCCSCHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHH-HHHHHHHhccccchhHHHHHHHHhccCC
Confidence 9999999999999999999999999999999999 9999999987522110 0000 000 0 0
Q ss_pred chhhhhh--cccccHHHHHHHHHhh-------------hhcC--CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 163 YESWVDF--LLPKTADALKVQFDIA-------------CYKL--PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 163 ~~~~~~~--~~~~~~~~~~~~~~~~-------------~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
....... ........-....... .... .......+.++.+|+|+++|++|.+++.+ ++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~ 241 (286)
T 2yys_A 163 PKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPY-AEEVAS 241 (286)
T ss_dssp HHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTTTT-HHHHHH
T ss_pred hHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcCCHh-HHHHHh
Confidence 0000000 0000000000000000 0000 01122234455699999999999999999 999999
Q ss_pred HhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 226 QVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 226 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++ ++++++++++||+++.|+|+++++.|.+||++..
T Consensus 242 -~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 277 (286)
T 2yys_A 242 -RL-RAPIRVLPEAGHYLWIDAPEAFEEAFKEALAALV 277 (286)
T ss_dssp -HH-TCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTTC
T ss_pred -CC-CCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhhh
Confidence 88 8999999999999999999999999999998754
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=240.94 Aligned_cols=227 Identities=19% Similarity=0.202 Sum_probs=164.8
Q ss_pred cCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 29 EPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
.+|.+++|...|. +++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+...++.+.+++|+.++++
T Consensus 14 ~~g~~l~y~~~G~---g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~ 89 (281)
T 3fob_A 14 QAPIEIYYEDHGT---GKPVVLIHGWPLSGR-SWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLE 89 (281)
T ss_dssp TEEEEEEEEEESS---SEEEEEECCTTCCGG-GGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCC---CCeEEEECCCCCcHH-HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 3788999988875 689999999999999 999999999776 99999999999999987777899999999999999
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCc------------hhhhHhhhhcc------chhhh-
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTE------------SVSNAALERIG------YESWV- 167 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~------------~~~~~~~~~~~------~~~~~- 167 (270)
+++.++++|+||||||.+++.+++. .|++++++|++++..+... ........... .....
T Consensus 90 ~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (281)
T 3fob_A 90 QLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTK 169 (281)
T ss_dssp HTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHH
Confidence 9999999999999999988777666 4899999999987543210 00000000000 00000
Q ss_pred hhccc-----ccHHHHHHHH-Hh------------hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHH-HHHHHHhc
Q 024228 168 DFLLP-----KTADALKVQF-DI------------ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA-RNLKEQVG 228 (270)
Q Consensus 168 ~~~~~-----~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~ 228 (270)
..+.. .......... .. ............+.++.+|+|+|+|++|.++|.+.. +.+.+.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p 249 (281)
T 3fob_A 170 GFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIP 249 (281)
T ss_dssp HHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHST
T ss_pred HhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCC
Confidence 00000 0000000000 00 000000111233556669999999999999998865 66677777
Q ss_pred CCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 229 QNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 229 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
++++++++++||+++.|+|+++++.|.+||+
T Consensus 250 -~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 250 -NSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp -TCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred -CceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 9999999999999999999999999999996
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=238.05 Aligned_cols=237 Identities=19% Similarity=0.237 Sum_probs=173.8
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTAS 96 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~ 96 (270)
....++.+ +|.+++|...++ +++|||+||++ ++.. .|..+++.|++.|+|+++|+||||.|+ +.. .++.+
T Consensus 16 ~~~~~~~~-~g~~l~y~~~g~---g~~vvllHG~~~~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~-~~~~~~~~~ 89 (296)
T 1j1i_A 16 YVERFVNA-GGVETRYLEAGK---GQPVILIHGGGAGAESEG-NWRNVIPILARHYRVIAMDMLGFGKTA-KPDIEYTQD 89 (296)
T ss_dssp CEEEEEEE-TTEEEEEEEECC---SSEEEEECCCSTTCCHHH-HHTTTHHHHTTTSEEEEECCTTSTTSC-CCSSCCCHH
T ss_pred CcceEEEE-CCEEEEEEecCC---CCeEEEECCCCCCcchHH-HHHHHHHHHhhcCEEEEECCCCCCCCC-CCCCCCCHH
Confidence 34566776 799999988775 68999999997 6666 898999999888999999999999999 443 68999
Q ss_pred HHHHHHHHHHHHhCC-CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh--hHhhhh-c---cchhhhhh
Q 024228 97 FQAECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS--NAALER-I---GYESWVDF 169 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~--~~~~~~-~---~~~~~~~~ 169 (270)
.+++|+.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++......... ...... . ........
T Consensus 90 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (296)
T 1j1i_A 90 RRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKA 169 (296)
T ss_dssp HHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHHHHHH
Confidence 999999999999998 8999999999999999999999999999999998653211100 000000 0 00000000
Q ss_pred c-c-c-----c-------------cHHHHHHHHHhhhh-cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 170 L-L-P-----K-------------TADALKVQFDIACY-KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 170 ~-~-~-----~-------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
. . . . ....+...+..... ...+.....+..+.+|+|+++|++|.++|++.++.+.+.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~ 249 (296)
T 1j1i_A 170 LTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLID 249 (296)
T ss_dssp HSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT
T ss_pred hccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCC
Confidence 0 0 0 0 00001111110000 11122233456667999999999999999999999999987
Q ss_pred CCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 229 QNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 229 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
+.++++++++||+++.|+|+++++.|.+||++...
T Consensus 250 -~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 284 (296)
T 1j1i_A 250 -DSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRVD 284 (296)
T ss_dssp -TEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC--
T ss_pred -CCEEEEECCCCCCchhcCHHHHHHHHHHHHhccCC
Confidence 89999999999999999999999999999987654
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=234.99 Aligned_cols=235 Identities=20% Similarity=0.270 Sum_probs=172.0
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQ 98 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~ 98 (270)
.+++.+ +|.+++|...++ .+.|+|||+||++ ++.. .|..+++.|+++|+|+++|+||||.|+.+.. .++.+.+
T Consensus 9 ~~~~~~-~g~~l~y~~~g~-~g~p~vvllHG~~~~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 85 (285)
T 1c4x_A 9 EKRFPS-GTLASHALVAGD-PQSPAVVLLHGAGPGAHAAS-NWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSW 85 (285)
T ss_dssp EEEECC-TTSCEEEEEESC-TTSCEEEEECCCSTTCCHHH-HHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHH
T ss_pred ceEEEE-CCEEEEEEecCC-CCCCEEEEEeCCCCCCcchh-hHHHHHHHHhhCcEEEEecCCCCCCCCCCCCcccchhhh
Confidence 455666 789999988774 2334599999997 6666 8989999998889999999999999987654 5789999
Q ss_pred ----HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch---hhhHhhhhc---c---chh
Q 024228 99 ----AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES---VSNAALERI---G---YES 165 (270)
Q Consensus 99 ----~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~---~~~~~~~~~---~---~~~ 165 (270)
++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... ......... . ...
T Consensus 86 ~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (285)
T 1c4x_A 86 VGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRE 165 (285)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHH
T ss_pred hhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccccHHHHHH
Confidence 999999999999999999999999999999999999999999999986532111 000000000 0 000
Q ss_pred hhhhc--cccc---H-HH-------------HHHHHHhhhhcC-----CCChhhhhhhhheeeeEEEcCCCccCCHHHHH
Q 024228 166 WVDFL--LPKT---A-DA-------------LKVQFDIACYKL-----PTLPAFVYKHILEKIHLLWGENDKIFDMQVAR 221 (270)
Q Consensus 166 ~~~~~--~~~~---~-~~-------------~~~~~~~~~~~~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 221 (270)
..... .+.. . .. ............ .+.....+.++.+|+|+++|++|.++|++.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~ 245 (285)
T 1c4x_A 166 LIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSL 245 (285)
T ss_dssp HHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHH
T ss_pred HHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCHHHHH
Confidence 00000 0000 0 00 000000000001 11122445666799999999999999999999
Q ss_pred HHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 222 NLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
.+.+.++ +.++++++++||+++.++|+++++.|.+||++
T Consensus 246 ~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 246 YLTKHLK-HAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HHHHHCS-SEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHhCC-CceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 9999997 89999999999999999999999999999974
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=236.17 Aligned_cols=232 Identities=19% Similarity=0.127 Sum_probs=168.5
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
++...+|.+++|...++ .++++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+...++.+++++|+.
T Consensus 2 ~~~~~~g~~l~y~~~g~-~~~~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~ 79 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGP-RDGLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVA 79 (275)
T ss_dssp EEECTTSCEEEEEEESC-TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEEccCCCEEEEEEcCC-CCCceEEEECCCCCchh-hHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHHH
Confidence 45667899999988774 34689999999999999 999999999987 9999999999999987666689999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCch-------hhhHhh----hhcc------chh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTES-------VSNAAL----ERIG------YES 165 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~-------~~~~~~----~~~~------~~~ 165 (270)
+++++++.++++|+||||||.+++.+++++ |++|+++|++++..+.... ...... .... ...
T Consensus 80 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (275)
T 1a88_A 80 ALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYID 159 (275)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHHHh
Confidence 999999999999999999999999988886 9999999999975432100 000000 0000 000
Q ss_pred hhh-h-cc----c--ccHHHHHHHHHhh-------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHH
Q 024228 166 WVD-F-LL----P--KTADALKVQFDIA-------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNL 223 (270)
Q Consensus 166 ~~~-~-~~----~--~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~ 223 (270)
... . .. . ............. ... .......+.++.+|+|+++|++|.++|++. .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 238 (275)
T 1a88_A 160 VPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFS-ETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKS 238 (275)
T ss_dssp HHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH-HCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred hhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhh-hcccccccccCCCCEEEEecCCCccCCcHHHHHHH
Confidence 000 0 00 0 0001111110000 000 011123345666999999999999999874 4555
Q ss_pred HHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 224 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+.++ ++++++++++||+++.++|+++++.|.+||+
T Consensus 239 ~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 239 AELLA-NATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHST-TEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HhhCC-CcEEEEcCCCCccHHHhCHHHHHHHHHHHhh
Confidence 66666 8999999999999999999999999999996
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=237.12 Aligned_cols=243 Identities=16% Similarity=0.142 Sum_probs=177.6
Q ss_pred cCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHH
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
..+++..++.+ +|.+++|...++ +|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|..+...++.++
T Consensus 7 ~~~~~~~~~~~-~g~~l~~~~~g~---~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 81 (301)
T 3kda_A 7 PNGFESAYREV-DGVKLHYVKGGQ---GPLVMLVHGFGQTWY-EWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQ 81 (301)
T ss_dssp CTTCEEEEEEE-TTEEEEEEEEES---SSEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCSSHHH
T ss_pred ccccceEEEee-CCeEEEEEEcCC---CCEEEEECCCCcchh-HHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCccHHH
Confidence 34667777777 799999998874 789999999999999 9999999999889999999999999998877789999
Q ss_pred HHHHHHHHHHHhCCCc-eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh---------------------h
Q 024228 98 QAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS---------------------N 155 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---------------------~ 155 (270)
+++|+.+++++++.++ ++|+||||||.+++.+|.++|++|+++|++++......... .
T Consensus 82 ~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (301)
T 3kda_A 82 VAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADD 161 (301)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCST
T ss_pred HHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCc
Confidence 9999999999999888 99999999999999999999999999999998643221110 0
Q ss_pred Hhhhhc---c----chhhhhhcccc----cHHHHHHHHHhhh-----------hcCC-----CChh--hhhhhhheeeeE
Q 024228 156 AALERI---G----YESWVDFLLPK----TADALKVQFDIAC-----------YKLP-----TLPA--FVYKHILEKIHL 206 (270)
Q Consensus 156 ~~~~~~---~----~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~~~-----~~~~--~~~~~~~~P~l~ 206 (270)
...... . ........... ............. +... .... ..+.++.+|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~ 241 (301)
T 3kda_A 162 RLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLA 241 (301)
T ss_dssp THHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEE
T ss_pred chHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcceEE
Confidence 000000 0 00000000000 0000000000000 0000 0000 001145599999
Q ss_pred EEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhccC
Q 024228 207 LWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANGQ 268 (270)
Q Consensus 207 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~~ 268 (270)
++|++| ++....+.+.+.++ ++++++++++||+++.++|+++++.|.+|+++....+++
T Consensus 242 i~G~~D--~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~~~~~~ 300 (301)
T 3kda_A 242 GGGAGG--MGTFQLEQMKAYAE-DVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGRHHHHH 300 (301)
T ss_dssp ECSTTS--CTTHHHHHHHTTBS-SEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSCCCC--
T ss_pred EecCCC--CChhHHHHHHhhcc-cCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCchhhcc
Confidence 999999 67788888888887 899999999999999999999999999999987655544
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=235.86 Aligned_cols=230 Identities=17% Similarity=0.140 Sum_probs=167.2
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+++..+|.+++|...+. +++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+...++.+.+++|+.
T Consensus 2 ~~~~~~g~~l~y~~~g~---~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~ 77 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWGS---GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLA 77 (273)
T ss_dssp EEECTTSCEEEEEEESC---SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEecCCCcEEEEEEcCC---CCEEEEECCCCCcHH-HHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 35666899999988774 689999999999999 999999999987 9999999999999987666689999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCc-------hhhhHhhh----hcc------chh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTE-------SVSNAALE----RIG------YES 165 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~-------~~~~~~~~----~~~------~~~ 165 (270)
+++++++.++++|+||||||.+++.+++++ |++|+++|++++..+... ........ ... ...
T Consensus 78 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
T 1a8s_A 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKD 157 (273)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHHHHHHH
Confidence 999999999999999999999999987776 899999999987542210 00000000 000 000
Q ss_pred hhh-hccc-------ccHHHHHHHHHhh-------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHH
Q 024228 166 WVD-FLLP-------KTADALKVQFDIA-------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNL 223 (270)
Q Consensus 166 ~~~-~~~~-------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~ 223 (270)
... .... ............. ... .......+.++.+|+|+++|++|.++|.+ ..+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 236 (273)
T 1a8s_A 158 LASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFS-ETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIAS 236 (273)
T ss_dssp HHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH-HCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred hhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHh-ccChhhhhhcCCCCEEEEECCCCccCChHHHHHHH
Confidence 000 0000 0001111110000 000 01112335566799999999999999987 44556
Q ss_pred HHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 224 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+.++ ++++++++++||+++.++|+++++.|.+||+
T Consensus 237 ~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 237 AALVK-GSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHST-TCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHhCC-CcEEEEeCCCCCcchhhCHHHHHHHHHHHHh
Confidence 66666 8999999999999999999999999999996
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=238.58 Aligned_cols=235 Identities=16% Similarity=0.169 Sum_probs=169.3
Q ss_pred ceeEEEeecCC----eEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC--CC
Q 024228 21 MTQRTIEIEPG----TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP--DR 93 (270)
Q Consensus 21 ~~~~~i~~~~g----~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~ 93 (270)
.+.+++++ +| .+++|...++..++++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+.. .+
T Consensus 19 ~~~~~~~~-~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~ 96 (297)
T 2xt0_A 19 YAPHYLEG-LPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSF-LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVY 96 (297)
T ss_dssp CCCEEECC-CTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGC
T ss_pred CccEEEec-cCCCCceEEEEEEccCCCCCCeEEEECCCCCcce-eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccC
Confidence 45667777 46 9999988875322789999999999998 999999999987 9999999999999986653 58
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-h--hhHhhhhc------cch
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-V--SNAALERI------GYE 164 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-~--~~~~~~~~------~~~ 164 (270)
+.+.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... . ........ ...
T Consensus 97 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (297)
T 2xt0_A 97 TFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVG 176 (297)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchh
Confidence 99999999999999999999999999999999999999999999999999985421110 0 00000000 000
Q ss_pred hhhhhcccc-cHHHHHHH------------HHhhhhcCC---C--------Chhhhhh-hhheeeeEEEcCCCccCCHHH
Q 024228 165 SWVDFLLPK-TADALKVQ------------FDIACYKLP---T--------LPAFVYK-HILEKIHLLWGENDKIFDMQV 219 (270)
Q Consensus 165 ~~~~~~~~~-~~~~~~~~------------~~~~~~~~~---~--------~~~~~~~-~~~~P~l~i~g~~D~~~~~~~ 219 (270)
......... .......+ ......... . .....+. ++.+|+|+|+|++|.++| +.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~ 255 (297)
T 2xt0_A 177 KLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PE 255 (297)
T ss_dssp HHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HH
T ss_pred HHHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hH
Confidence 000000000 00000000 000000000 0 0112345 677999999999999999 88
Q ss_pred HHHHHHHhcCCceEEE--ecCCCcceeecchHhHHHHHHHHHH
Q 024228 220 ARNLKEQVGQNATMES--IEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 220 ~~~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+.+.+.++ +.++++ ++++||+++. +|+++++.|.+||+
T Consensus 256 ~~~~~~~~p-~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 256 VMGMLRQAI-RGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHHS-TTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred HHHHHHhCC-CCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 888999988 666554 7899999999 99999999999985
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=230.99 Aligned_cols=234 Identities=15% Similarity=0.133 Sum_probs=165.0
Q ss_pred EEEeecCCeEEEEEec--CCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHH
Q 024228 24 RTIEIEPGTILNIWVP--KKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAEC 101 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~--~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 101 (270)
..+.+ +|.+++|... |. ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+.+++|
T Consensus 7 ~~~~~-~g~~l~y~~~~~G~--~~p~vvllHG~~~~~~-~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~~~~~~~a~d 82 (276)
T 2wj6_A 7 HETLV-FDNKLSYIDNQRDT--DGPAILLLPGWCHDHR-VYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKD 82 (276)
T ss_dssp EEEEE-TTEEEEEEECCCCC--SSCEEEEECCTTCCGG-GGHHHHHHHTTTSCEEEECCTTCSSSCCCCCCCCHHHHHHH
T ss_pred eEEee-CCeEEEEEEecCCC--CCCeEEEECCCCCcHH-HHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCCCCHHHHHHH
Confidence 34555 7999999887 53 4589999999999999 99999999998899999999999999977667899999999
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCchhhhHhhhh----ccc----hhh-hhhcc
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVSNAALER----IGY----ESW-VDFLL 171 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~~~~~~~~~----~~~----~~~-~~~~~ 171 (270)
+.+++++++.++++|+||||||.+|+.+|.++ |++|+++|++++............... ... ... .....
T Consensus 83 l~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T 2wj6_A 83 ALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWLD 162 (276)
T ss_dssp HHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999 999999999987542211110000000 000 000 00000
Q ss_pred cccHHHHHHHHHh------------------hhhcCCCChhhhhhhhheeeeEEEcCCCccCC--HHHHHHHHHHhcCCc
Q 024228 172 PKTADALKVQFDI------------------ACYKLPTLPAFVYKHILEKIHLLWGENDKIFD--MQVARNLKEQVGQNA 231 (270)
Q Consensus 172 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~ 231 (270)
..........+.. ..+.........+..+.+|+++++|..|...+ ....+.+.+.++ ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p-~a 241 (276)
T 2wj6_A 163 GHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHP-WF 241 (276)
T ss_dssp TBCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCT-TE
T ss_pred ccchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCC-Ce
Confidence 0000000000000 00000001122344556899998864333222 344567777787 99
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++++++++||+++.|+|+++++.|.+||++.
T Consensus 242 ~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 242 SYAKLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp EEEECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999865
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=236.66 Aligned_cols=233 Identities=17% Similarity=0.234 Sum_probs=172.3
Q ss_pred EEeecCC-eEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHH
Q 024228 25 TIEIEPG-TILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQA 99 (270)
Q Consensus 25 ~i~~~~g-~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~ 99 (270)
++.+ +| .+++|...++ +++|+|||+||++ ++.. .|..+++.|+++|+|+++|+||||.|+.+.. .++.++++
T Consensus 17 ~~~~-~g~~~l~y~~~G~-g~~~~vvllHG~~pg~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a 93 (291)
T 2wue_A 17 EVDV-DGPLKLHYHEAGV-GNDQTVVLLHGGGPGAASWT-NFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAA 93 (291)
T ss_dssp EEES-SSEEEEEEEEECT-TCSSEEEEECCCCTTCCHHH-HTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSHHHHHH
T ss_pred EEEe-CCcEEEEEEecCC-CCCCcEEEECCCCCccchHH-HHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcCHHHHH
Confidence 5666 79 9999988875 2345999999997 7777 8999999998889999999999999987665 58899999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc-------hhhhHhhhh---cc---chhh
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE-------SVSNAALER---IG---YESW 166 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~-------~~~~~~~~~---~~---~~~~ 166 (270)
+|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... ......... .. ....
T Consensus 94 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (291)
T 2wue_A 94 MALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAF 173 (291)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999998753210 000000000 00 0000
Q ss_pred hhhcc--c-----cc----------HHHHHHHHHhh-hhcC--CCChh--hhhhhhheeeeEEEcCCCccCCHHHHHHHH
Q 024228 167 VDFLL--P-----KT----------ADALKVQFDIA-CYKL--PTLPA--FVYKHILEKIHLLWGENDKIFDMQVARNLK 224 (270)
Q Consensus 167 ~~~~~--~-----~~----------~~~~~~~~~~~-~~~~--~~~~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 224 (270)
..... + .. .......+... .... ..... ..+.++.+|+|+|+|++|.++|++.++.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~ 253 (291)
T 2wue_A 174 LRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVAL 253 (291)
T ss_dssp HHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHH
T ss_pred HHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHH
Confidence 00000 0 00 00001111100 0000 00011 345666799999999999999999999999
Q ss_pred HHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 225 EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 225 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+.++ ++++++++++||+++.|+|+++++.|.+||++
T Consensus 254 ~~~p-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 254 KTIP-RAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp HHST-TEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HHCC-CCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9998 89999999999999999999999999999964
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=238.66 Aligned_cols=243 Identities=15% Similarity=0.139 Sum_probs=174.1
Q ss_pred ceeEEEeecCCeEEEEEecCCC-CC--CceEEEeCCCCCcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCC----C
Q 024228 21 MTQRTIEIEPGTILNIWVPKKT-TK--KHAVVLLHPFGFDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDR----P 91 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~-~~--~~~vv~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~----~ 91 (270)
.+..++.+ +|.+++|...++. .+ +++|||+||++++.. .|...+..|++ +|+|+++|+||||.|+... .
T Consensus 28 ~~~~~v~~-~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~-~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~ 105 (330)
T 3nwo_A 28 VSSRTVPF-GDHETWVQVTTPENAQPHALPLIVLHGGPGMAH-NYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPAD 105 (330)
T ss_dssp -CEEEEEE-TTEEEEEEEECCSSCCTTCCCEEEECCTTTCCS-GGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGG
T ss_pred CcceeEee-cCcEEEEEEecCccCCCCCCcEEEECCCCCCch-hHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccc
Confidence 46677888 7999999988763 22 458999999999988 88888888874 5999999999999998632 2
Q ss_pred CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--Hhhhhc--------
Q 024228 92 DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERI-------- 161 (270)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~~~~~~-------- 161 (270)
.++.+.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|.++|++++.......... ......
T Consensus 106 ~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (330)
T 3nwo_A 106 FWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAAL 185 (330)
T ss_dssp GCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHHH
Confidence 3688999999999999999999999999999999999999999999999999886542210000 000000
Q ss_pred ---------cchh--------hhhhc--ccccHHHHHHHHHhh-----hh--------------cCCCChhhhhhhhhee
Q 024228 162 ---------GYES--------WVDFL--LPKTADALKVQFDIA-----CY--------------KLPTLPAFVYKHILEK 203 (270)
Q Consensus 162 ---------~~~~--------~~~~~--~~~~~~~~~~~~~~~-----~~--------------~~~~~~~~~~~~~~~P 203 (270)
.... ..... .......+...+... .+ ...+.....+.++.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 265 (330)
T 3nwo_A 186 DRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAP 265 (330)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCSC
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCCCC
Confidence 0000 00000 000000111110000 00 0011122345566699
Q ss_pred eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhcc
Q 024228 204 IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANG 267 (270)
Q Consensus 204 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~ 267 (270)
+|+|+|++|.++| ...+.+.+.++ ++++++++++||++++|+|+++++.|.+||++......
T Consensus 266 ~Lvi~G~~D~~~p-~~~~~~~~~ip-~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~~~~~ 327 (330)
T 3nwo_A 266 VLVIAGEHDEATP-KTWQPFVDHIP-DVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHDLAAD 327 (330)
T ss_dssp EEEEEETTCSSCH-HHHHHHHHHCS-SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEeeCCCccCh-HHHHHHHHhCC-CCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcccchh
Confidence 9999999999876 46788888888 99999999999999999999999999999998765443
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=235.50 Aligned_cols=242 Identities=14% Similarity=0.165 Sum_probs=179.8
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHH-hhccceEEeecCCCCCCCCCCCCCCChHHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLA-LAKTYEVYVPDFLFFGSSVTDRPDRTASFQ 98 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~-l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~ 98 (270)
.++..++.+ +|.+++|...++ +|+||++||++++.. .|..+++. +.++|+|+++|+||||.|+.+...++.+++
T Consensus 8 ~~~~~~~~~-~g~~l~~~~~g~---~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~ 82 (309)
T 3u1t_A 8 PFAKRTVEV-EGATIAYVDEGS---GQPVLFLHGNPTSSY-LWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDH 82 (309)
T ss_dssp CCCCEEEEE-TTEEEEEEEEEC---SSEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHH
T ss_pred cccceEEEE-CCeEEEEEEcCC---CCEEEEECCCcchhh-hHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHH
Confidence 366778888 799999988876 789999999999999 99999988 555599999999999999987778999999
Q ss_pred HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc------hhhh---Hhhhhccch-----
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE------SVSN---AALERIGYE----- 164 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~------~~~~---~~~~~~~~~----- 164 (270)
++|+.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++...... .... .........
T Consensus 83 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (309)
T 3u1t_A 83 VAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEK 162 (309)
T ss_dssp HHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTTHHHH
T ss_pred HHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccchhhh
Confidence 99999999999999999999999999999999999999999999998754331 0000 000000000
Q ss_pred ----------hhhhh--c-ccccHHHHHHHHHh-------------hhhcC-CC----------ChhhhhhhhheeeeEE
Q 024228 165 ----------SWVDF--L-LPKTADALKVQFDI-------------ACYKL-PT----------LPAFVYKHILEKIHLL 207 (270)
Q Consensus 165 ----------~~~~~--~-~~~~~~~~~~~~~~-------------~~~~~-~~----------~~~~~~~~~~~P~l~i 207 (270)
..... . .............. ..... .. .....+.++.+|+|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 242 (309)
T 3u1t_A 163 MVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLF 242 (309)
T ss_dssp HHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred hccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEEEE
Confidence 00000 0 00000000000000 00000 00 0012234455999999
Q ss_pred EcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhcc
Q 024228 208 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANG 267 (270)
Q Consensus 208 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~ 267 (270)
+|++|.++|.+..+.+.+.++ +.++++++++||+++.++|+++.+.|.+||+++.....
T Consensus 243 ~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~~ 301 (309)
T 3u1t_A 243 HAEPGALAPKPVVDYLSENVP-NLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHAS 301 (309)
T ss_dssp EEEECSSSCHHHHHHHHHHST-TEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCCCC
T ss_pred ecCCCCCCCHHHHHHHHhhCC-CCEEEEecCCcccchhhCHHHHHHHHHHHHHhcchhhh
Confidence 999999999999999999998 88889999999999999999999999999998875443
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=230.93 Aligned_cols=235 Identities=18% Similarity=0.124 Sum_probs=171.3
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHH-HHHHhhcc-ceEEeecCCCCCCCCC--C-CCCCChH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQF-QVLALAKT-YEVYVPDFLFFGSSVT--D-RPDRTAS 96 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~-~~v~~~d~~g~G~s~~--~-~~~~~~~ 96 (270)
+..++.. +|.+++|...++ +++|+||++||++++.. .|.. +++.|+++ |+|+++|+||||.|+. + ...++.+
T Consensus 2 ~~~~~~~-~g~~l~y~~~G~-~~~~~vvllHG~~~~~~-~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~ 78 (298)
T 1q0r_A 2 SERIVPS-GDVELWSDDFGD-PADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFG 78 (298)
T ss_dssp CEEEEEE-TTEEEEEEEESC-TTSCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHH
T ss_pred CCceecc-CCeEEEEEeccC-CCCCeEEEEcCCCCCcc-chHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHH
Confidence 4556665 799999988874 34689999999999998 9976 55999988 9999999999999986 2 3458999
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccC-CCCch------------------hhhHh
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM-GLTES------------------VSNAA 157 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~-~~~~~------------------~~~~~ 157 (270)
++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.. ..... .....
T Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (298)
T 1q0r_A 79 ELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPF 158 (298)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHHH
Confidence 999999999999999999999999999999999999999999999998765 21000 00000
Q ss_pred hhhc--------cchhhhh-------hc----ccccHHHHHHHH----HhhhhcC-----------CCChhhh-hhhhhe
Q 024228 158 LERI--------GYESWVD-------FL----LPKTADALKVQF----DIACYKL-----------PTLPAFV-YKHILE 202 (270)
Q Consensus 158 ~~~~--------~~~~~~~-------~~----~~~~~~~~~~~~----~~~~~~~-----------~~~~~~~-~~~~~~ 202 (270)
.... ....... .. ............ ....... ....... +.++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 238 (298)
T 1q0r_A 159 LDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTV 238 (298)
T ss_dssp HHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCS
T ss_pred HHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCcccccccccccCC
Confidence 0000 0000000 00 001111111111 1100000 0011223 566679
Q ss_pred eeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 203 KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 203 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
|+|+++|++|.++|++..+.+.+.++ ++++++++++|| +.|+++++.|.+||++...
T Consensus 239 P~Lvi~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~gH----e~p~~~~~~i~~fl~~~~~ 295 (298)
T 1q0r_A 239 PTLVIQAEHDPIAPAPHGKHLAGLIP-TARLAEIPGMGH----ALPSSVHGPLAEVILAHTR 295 (298)
T ss_dssp CEEEEEETTCSSSCTTHHHHHHHTST-TEEEEEETTCCS----SCCGGGHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCccCCHHHHHHHHHhCC-CCEEEEcCCCCC----CCcHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999887 899999999999 7899999999999987654
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=231.94 Aligned_cols=230 Identities=18% Similarity=0.176 Sum_probs=167.0
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+++..+|.+++|...+. +++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+...++.+.+++|+.
T Consensus 2 ~~~~~~g~~l~y~~~g~---g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~ 77 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWGQ---GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLN 77 (274)
T ss_dssp EEECTTSCEEEEEEECS---SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEEccCCCEEEEEecCC---CceEEEECCCcchHH-HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHHH
Confidence 45667899999987774 688999999999999 999999999887 9999999999999987666689999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCc-------hhhhHhhh----hcc------chh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTE-------SVSNAALE----RIG------YES 165 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~-------~~~~~~~~----~~~------~~~ 165 (270)
+++++++.++++|+||||||.+++.+++++ |++|+++|++++..+... ........ ... ...
T Consensus 78 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (274)
T 1a8q_A 78 DLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKD 157 (274)
T ss_dssp HHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHHHHHHH
Confidence 999999999999999999999999988776 999999999997542110 00000000 000 000
Q ss_pred hh-hhcc-c-----ccHHHHHHHHHhh-------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHHH
Q 024228 166 WV-DFLL-P-----KTADALKVQFDIA-------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNLK 224 (270)
Q Consensus 166 ~~-~~~~-~-----~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~ 224 (270)
.. .... . ............. ... .......+.++.+|+|+++|++|.++|++. .+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 236 (274)
T 1a8q_A 158 TAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFG-YTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSA 236 (274)
T ss_dssp HHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHH-HCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHH
T ss_pred hcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhh-cCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHH
Confidence 00 0000 0 0000011111000 000 011123345566999999999999999874 45566
Q ss_pred HHhcCCceEEEecCCCcceeec--chHhHHHHHHHHHH
Q 024228 225 EQVGQNATMESIEKAGHLVNLE--RPFVYNRQLKTILA 260 (270)
Q Consensus 225 ~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~ 260 (270)
+.++ ++++++++++||+++.+ +|+++++.|.+||+
T Consensus 237 ~~~~-~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 237 QIIP-NAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp HHST-TCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred hhCC-CceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 6666 89999999999999999 99999999999985
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=234.72 Aligned_cols=242 Identities=16% Similarity=0.170 Sum_probs=180.8
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
.++.+++.+ +|.+++|...++ +++|+||++||++++.. .|..+++.|+++|+|+++|+||||.|+......+.++++
T Consensus 9 ~~~~~~~~~-~g~~l~~~~~g~-~~~~~vl~lHG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~ 85 (299)
T 3g9x_A 9 PFDPHYVEV-LGERMHYVDVGP-RDGTPVLFLHGNPTSSY-LWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHV 85 (299)
T ss_dssp CCCCEEEEE-TTEEEEEEEESC-SSSCCEEEECCTTCCGG-GGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCCCHHHHH
T ss_pred ccceeeeee-CCeEEEEEecCC-CCCCEEEEECCCCccHH-HHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcccHHHHH
Confidence 456778888 799999988876 45789999999999999 999999999877999999999999999887789999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh-----hhHhhhhccchhh--------
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-----SNAALERIGYESW-------- 166 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~-------- 166 (270)
+|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++........ .............
T Consensus 86 ~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
T 3g9x_A 86 RYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQ 165 (299)
T ss_dssp HHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHHHHHHTTS
T ss_pred HHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcchhhhccc
Confidence 999999999999999999999999999999999999999999999655433110 0000000000000
Q ss_pred -------hhh-c-ccccHHHHHHHHH-------------hhhhcC-CC----------ChhhhhhhhheeeeEEEcCCCc
Q 024228 167 -------VDF-L-LPKTADALKVQFD-------------IACYKL-PT----------LPAFVYKHILEKIHLLWGENDK 213 (270)
Q Consensus 167 -------~~~-~-~~~~~~~~~~~~~-------------~~~~~~-~~----------~~~~~~~~~~~P~l~i~g~~D~ 213 (270)
... . ............. ...... .. .....+.++.+|+++++|++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~ 245 (299)
T 3g9x_A 166 NAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGV 245 (299)
T ss_dssp CHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECS
T ss_pred hhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEecCCCC
Confidence 000 0 0000000000000 000000 00 0111234455999999999999
Q ss_pred cCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhh
Q 024228 214 IFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
++|++.++.+.+.++ ++++++++++||+++.++|+++++.|.+++.+....
T Consensus 246 ~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 246 LIPPAEAARLAESLP-NCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHHH 296 (299)
T ss_dssp SSCHHHHHHHHHHST-TEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGCCC
T ss_pred CCCHHHHHHHHhhCC-CCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhhhc
Confidence 999999999999997 899999999999999999999999999999876543
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=233.43 Aligned_cols=227 Identities=20% Similarity=0.194 Sum_probs=168.4
Q ss_pred cCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 29 EPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
.+|.+++|...+. +++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+...++.+.+++|+.++++
T Consensus 10 ~~g~~l~y~~~g~---~~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~ 85 (279)
T 1hkh_A 10 STPIELYYEDQGS---GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLE 85 (279)
T ss_dssp TEEEEEEEEEESS---SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCC---CCcEEEEcCCCchhh-HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3788899987764 577999999999999 999999999887 99999999999999987777899999999999999
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCcc-ccccEEEecccCCCCchh-------hhHhh----hhcc------chhhhh-
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVMGLTESV-------SNAAL----ERIG------YESWVD- 168 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~~~~~~~-------~~~~~----~~~~------~~~~~~- 168 (270)
+++.++++|+||||||.+++.+|.++|+ +|+++|++++..+..... ..... .... ......
T Consensus 86 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (279)
T 1hkh_A 86 TLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKN 165 (279)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhh
Confidence 9999999999999999999999999998 999999999754321000 00000 0000 000000
Q ss_pred hcc-------cccHHHHHHHHHhhhhcC-----------CCChhhhhhhh---heeeeEEEcCCCccCCHHHH-HHHHHH
Q 024228 169 FLL-------PKTADALKVQFDIACYKL-----------PTLPAFVYKHI---LEKIHLLWGENDKIFDMQVA-RNLKEQ 226 (270)
Q Consensus 169 ~~~-------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~---~~P~l~i~g~~D~~~~~~~~-~~~~~~ 226 (270)
... .................. .......+.++ .+|+|+++|++|.++|.+.. +.+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~ 245 (279)
T 1hkh_A 166 FYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQA 245 (279)
T ss_dssp HHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHH
T ss_pred hhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHh
Confidence 000 000011111111000000 11112345566 79999999999999998877 888888
Q ss_pred hcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 227 VGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 227 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
++ ++++++++++||+++.++|+++++.|.+||+
T Consensus 246 ~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 246 VP-EADYVEVEGAPHGLLWTHADEVNAALKTFLA 278 (279)
T ss_dssp CT-TSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred CC-CeeEEEeCCCCccchhcCHHHHHHHHHHHhh
Confidence 87 8999999999999999999999999999996
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=231.15 Aligned_cols=226 Identities=16% Similarity=0.114 Sum_probs=162.6
Q ss_pred EEEEecCCC--CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC
Q 024228 34 LNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV 111 (270)
Q Consensus 34 l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~ 111 (270)
++|...|+. .++++|||+||++++.. .|..+++.|+++|+|+++|+||||.|+... .++.+.+++|+.+++++++.
T Consensus 3 l~y~~~G~~~~~~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~~l~~l~~ 80 (255)
T 3bf7_A 3 LNIRAQTAQNQHNNSPIVLVHGLFGSLD-NLGVLARDLVNDHNIIQVDVRNHGLSPREP-VMNYPAMAQDLVDTLDALQI 80 (255)
T ss_dssp CCEEEECCSSCCCCCCEEEECCTTCCTT-TTHHHHHHHTTTSCEEEECCTTSTTSCCCS-CCCHHHHHHHHHHHHHHHTC
T ss_pred eeeeecCccccCCCCCEEEEcCCcccHh-HHHHHHHHHHhhCcEEEecCCCCCCCCCCC-CcCHHHHHHHHHHHHHHcCC
Confidence 566666642 25789999999999999 999999999888999999999999998654 57899999999999999999
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc-hhhhHhh---hhcc---c--hh-hhhhccc-ccHHHHHH
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE-SVSNAAL---ERIG---Y--ES-WVDFLLP-KTADALKV 180 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~-~~~~~~~---~~~~---~--~~-~~~~~~~-~~~~~~~~ 180 (270)
++++|+||||||.+|+.+|.++|++|+++|++++.+.... ....... .... . .. ....+.. ........
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHH
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHH
Confidence 9999999999999999999999999999999875432111 0000000 0000 0 00 0000000 00000111
Q ss_pred HHHhhhhcC--CCChh------------hhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 181 QFDIACYKL--PTLPA------------FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 181 ~~~~~~~~~--~~~~~------------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
++....... ..... ..+.++.+|+|+|+|++|.+++++..+.+.+.++ ++++++++++||+++.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e 239 (255)
T 3bf7_A 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP-QARAHVIAGAGHWVHAE 239 (255)
T ss_dssp HHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT-TEEECCBTTCCSCHHHH
T ss_pred HHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCC-CCeEEEeCCCCCccccC
Confidence 110000000 00000 0123455999999999999999999999999887 89999999999999999
Q ss_pred chHhHHHHHHHHHHhh
Q 024228 247 RPFVYNRQLKTILASL 262 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~~ 262 (270)
+|+++++.|.+||+++
T Consensus 240 ~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 240 KPDAVLRAIRRYLNDH 255 (255)
T ss_dssp CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 9999999999999753
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=229.24 Aligned_cols=238 Identities=18% Similarity=0.152 Sum_probs=167.1
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQ 98 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~ 98 (270)
++..++.+ +|.+++|...++..++++|||+||++++....|..+ ..+.+. |+|+++|+||||.|+.+. ..++.+.+
T Consensus 5 ~~~~~~~~-~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 82 (293)
T 1mtz_A 5 CIENYAKV-NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSL-RDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYG 82 (293)
T ss_dssp CEEEEEEE-TTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGG-GGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHH
T ss_pred hcceEEEE-CCEEEEEEEECCCCCCCeEEEEeCCCCcchhHHHHH-HHHHhcCcEEEEecCCCCccCCCCCCCcccHHHH
Confidence 45666777 699999988876323389999999876655144444 444555 999999999999998765 23789999
Q ss_pred HHHHHHHHHHh-CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--Hhhhhccc------------
Q 024228 99 AECMAKGLRKL-GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERIGY------------ 163 (270)
Q Consensus 99 ~~~~~~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~~~~~~~~------------ 163 (270)
++|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++.......... ........
T Consensus 83 ~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (293)
T 1mtz_A 83 VEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSS 162 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHHhhcc
Confidence 99999999999 9999999999999999999999999999999999987642211000 00000000
Q ss_pred -----hh-------hhh-hc--ccccHHHHHHHHH---------hhhh---------cCCCChhhhhhhhheeeeEEEcC
Q 024228 164 -----ES-------WVD-FL--LPKTADALKVQFD---------IACY---------KLPTLPAFVYKHILEKIHLLWGE 210 (270)
Q Consensus 164 -----~~-------~~~-~~--~~~~~~~~~~~~~---------~~~~---------~~~~~~~~~~~~~~~P~l~i~g~ 210 (270)
.. ... .. ............. .... ...+.....+.++.+|+|+++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 242 (293)
T 1mtz_A 163 GSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGE 242 (293)
T ss_dssp TCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEET
T ss_pred CCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEEEEeeC
Confidence 00 000 00 0000111111110 0000 00111223455666999999999
Q ss_pred CCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 211 NDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 211 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+| .++++.++.+.+.++ ++++++++++||+++.++|+++++.|.+||++.
T Consensus 243 ~D-~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 243 YD-EVTPNVARVIHEKIA-GSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp TC-SSCHHHHHHHHHHST-TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CC-CCCHHHHHHHHHhCC-CceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 99 677888899999887 899999999999999999999999999999753
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=230.12 Aligned_cols=235 Identities=18% Similarity=0.210 Sum_probs=170.9
Q ss_pred eEEEeec-CC--eEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHH-HHhhccceEEeecCCCCCCCCCCCC-CCC
Q 024228 23 QRTIEIE-PG--TILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQV-LALAKTYEVYVPDFLFFGSSVTDRP-DRT 94 (270)
Q Consensus 23 ~~~i~~~-~g--~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~-~~l~~~~~v~~~d~~g~G~s~~~~~-~~~ 94 (270)
.+++++. +| .+++|...++ +.++|||+||++ ++.. .|..++ +.|+++|+|+++|+||||.|+.+.. .++
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~--g~~~vvllHG~~~~~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~ 89 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQ--GDETVVLLHGSGPGATGWA-NFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSR 89 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECC--CSSEEEEECCCSTTCCHHH-HTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCH
T ss_pred ceEEEEcCCCcEEEEEEeccCC--CCceEEEECCCCcccchhH-HHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCccccC
Confidence 4566663 27 8999988775 233999999997 5555 788888 8898889999999999999987654 578
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-------hhhHhhhh---cc--
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-------VSNAALER---IG-- 162 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-------~~~~~~~~---~~-- 162 (270)
.+.+++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++....... ........ ..
T Consensus 90 ~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1u2e_A 90 SDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIE 169 (289)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHH
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHH
Confidence 8999999999999999999999999999999999999999999999999986531110 00000000 00
Q ss_pred -chhhhhhc--ccc----c------------HHHHHHHHHhhhhc--CCCChhhhhhhhheeeeEEEcCCCccCCHHHHH
Q 024228 163 -YESWVDFL--LPK----T------------ADALKVQFDIACYK--LPTLPAFVYKHILEKIHLLWGENDKIFDMQVAR 221 (270)
Q Consensus 163 -~~~~~~~~--~~~----~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 221 (270)
........ ... . ...+.......... ..+.....+.++.+|+|+++|++|.++|++.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 249 (289)
T 1u2e_A 170 NLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGL 249 (289)
T ss_dssp HHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHH
T ss_pred HHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHH
Confidence 00000000 000 0 00011111110000 111223445667799999999999999999999
Q ss_pred HHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 222 NLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
.+.+.++ +.++++++++||+++.++|+++++.|.+||++
T Consensus 250 ~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 250 RLLSGIA-GSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp HHHHHST-TCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred HHHhhCC-CcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 9999998 89999999999999999999999999999964
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=229.92 Aligned_cols=233 Identities=14% Similarity=0.126 Sum_probs=173.9
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC--CCCChHHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTASFQ 98 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~~~ 98 (270)
.+.+++++ +|.+++|...++ +|+||++||++++.. .|..+++.|+++|+|+++|+||||.|+... ..++.+++
T Consensus 3 ~~~~~~~~-~~~~~~y~~~g~---~~~vv~~HG~~~~~~-~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 77 (278)
T 3oos_A 3 WTTNIIKT-PRGKFEYFLKGE---GPPLCVTHLYSEYND-NGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTET 77 (278)
T ss_dssp CEEEEEEE-TTEEEEEEEECS---SSEEEECCSSEECCT-TCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGGSHHHH
T ss_pred cccCcEec-CCceEEEEecCC---CCeEEEEcCCCcchH-HHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccCcHHHH
Confidence 46677888 688999988875 789999999999999 899999999889999999999999998764 34789999
Q ss_pred HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh---------------hHhhhhccc
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS---------------NAALERIGY 163 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---------------~~~~~~~~~ 163 (270)
++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++......... .........
T Consensus 78 ~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T 3oos_A 78 IKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALND 157 (278)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999998876111000 000000000
Q ss_pred hhhh----hhc-------ccccHHHHH-------------HHHHhhh--hcCCCChhhhhhhhheeeeEEEcCCCccCCH
Q 024228 164 ESWV----DFL-------LPKTADALK-------------VQFDIAC--YKLPTLPAFVYKHILEKIHLLWGENDKIFDM 217 (270)
Q Consensus 164 ~~~~----~~~-------~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 217 (270)
.... ... ......... ..+.... ..........+..+.+|+++++|++|.++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 237 (278)
T 3oos_A 158 DSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPY 237 (278)
T ss_dssp TTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCH
T ss_pred cccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCH
Confidence 0000 000 000000000 0000000 0001112334455669999999999999999
Q ss_pred HHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 218 QVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
+.++.+.+.++ ++++++++++||+++.++|+++.+.|.+||
T Consensus 238 ~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 238 IFSCEIANLIP-NATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp HHHHHHHHHST-TEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred HHHHHHHhhCC-CcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 99999999997 899999999999999999999999999885
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=227.37 Aligned_cols=232 Identities=15% Similarity=0.099 Sum_probs=168.8
Q ss_pred EEeecCCeEEEEEecCCC---CCCceEEEeCCCCCc--ccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHH
Q 024228 25 TIEIEPGTILNIWVPKKT---TKKHAVVLLHPFGFD--GILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ 98 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~--~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~ 98 (270)
.+.. +|.+++++...+. +++|+||++||++++ .. .|..+++.|++. |+|+++|+||||.|+......+.+.+
T Consensus 5 ~~~~-~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 82 (251)
T 2wtm_A 5 YIDC-DGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEER-HIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKW 82 (251)
T ss_dssp EEEE-TTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSH-HHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHH
T ss_pred EEec-CCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccc-cHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHH
Confidence 3444 7999988665443 356889999999999 77 899999999887 99999999999999876556788889
Q ss_pred HHHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh--ccchhhhhhc-c
Q 024228 99 AECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER--IGYESWVDFL-L 171 (270)
Q Consensus 99 ~~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~ 171 (270)
++|+.++++.+. .++++|+||||||.+++.+|.++|++|+++|+++|............... .......... .
T Consensus 83 ~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (251)
T 2wtm_A 83 LTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDA 162 (251)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCSEEEE
T ss_pred HHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCchhcchHHhh
Confidence 999999999884 46899999999999999999999999999999988643221111000000 0000000000 0
Q ss_pred cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhH
Q 024228 172 PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 251 (270)
.........+.... ........+.++.+|+|+++|++|.++|++.++.+.+.++ ++++++++++||.+ .++|+++
T Consensus 163 ~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~gH~~-~~~~~~~ 237 (251)
T 2wtm_A 163 WDGRKLKGNYVRVA---QTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK-NCKLVTIPGDTHCY-DHHLELV 237 (251)
T ss_dssp TTTEEEETHHHHHH---TTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS-SEEEEEETTCCTTC-TTTHHHH
T ss_pred hhccccchHHHHHH---HccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC-CcEEEEECCCCccc-chhHHHH
Confidence 00000000111100 0112233455667999999999999999999999999987 89999999999999 9999999
Q ss_pred HHHHHHHHHhhh
Q 024228 252 NRQLKTILASLV 263 (270)
Q Consensus 252 ~~~i~~fl~~~~ 263 (270)
.+.|.+||++..
T Consensus 238 ~~~i~~fl~~~~ 249 (251)
T 2wtm_A 238 TEAVKEFMLEQI 249 (251)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=230.47 Aligned_cols=213 Identities=14% Similarity=0.174 Sum_probs=160.0
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh--CCCceEEEEEc
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL--GVEKCTLVGVS 120 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~G~S 120 (270)
+++.||++||++++.. .|..+++.|++. |+|+++|+||||.|+......+.+++++|+.++++.+ +.++++|+|||
T Consensus 50 ~~~~VlllHG~~~s~~-~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~v~lvG~S 128 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERCDVLFMTGLS 128 (281)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHHCSEEEEEEET
T ss_pred CCceEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEEEEEEC
Confidence 3567999999999999 999999999988 9999999999999976556678899999999999987 56799999999
Q ss_pred hhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch-------------hhhhhcc-cccHHHHHHHHHhhh
Q 024228 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE-------------SWVDFLL-PKTADALKVQFDIAC 186 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~-~~~~~~~~~~~~~~~ 186 (270)
|||.+++.+|.++|++|+++|++++................... ....... ......+..+.....
T Consensus 129 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (281)
T 4fbl_A 129 MGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAIKHLITIGA 208 (281)
T ss_dssp HHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGGGHHHHHHHHH
T ss_pred cchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchHHHHHHHHhhh
Confidence 99999999999999999999999987654432221111000000 0000000 001111111111111
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeec-chHhHHHHHHHHHHhh
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILASL 262 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 262 (270)
.....+.++.+|+|+++|++|.++|++.++.+++.++ .++++++++++||.++.+ +++++.+.|.+||+++
T Consensus 209 -----~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 209 -----VAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp -----HHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred -----hccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 0123355666999999999999999999999999986 356899999999999886 4889999999999874
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=231.06 Aligned_cols=237 Identities=16% Similarity=0.275 Sum_probs=167.3
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCC--C--CCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD--R--PDR 93 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~--~--~~~ 93 (270)
...+...+.+ +|.+++|...++ +|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+ . ..+
T Consensus 9 ~~~~~~~~~~-~g~~l~y~~~G~---g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~ 83 (328)
T 2cjp_A 9 KKIEHKMVAV-NGLNMHLAELGE---GPTILFIHGFPELWY-SWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKF 83 (328)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECS---SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGG
T ss_pred hhhheeEecC-CCcEEEEEEcCC---CCEEEEECCCCCchH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccc
Confidence 4455666666 799999988874 689999999999998 999999999876 99999999999999865 2 347
Q ss_pred ChHHHHHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc---hhhhHhhh---------
Q 024228 94 TASFQAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE---SVSNAALE--------- 159 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~---~~~~~~~~--------- 159 (270)
+.+.+++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|+++++..... ........
T Consensus 84 ~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T 2cjp_A 84 SILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYIS 163 (328)
T ss_dssp SHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHHH
Confidence 89999999999999999 89999999999999999999999999999999986542110 00000000
Q ss_pred hc-------------cchhhh-hhc----------------c---------cc--cHHHHHHHHHhhh----------hc
Q 024228 160 RI-------------GYESWV-DFL----------------L---------PK--TADALKVQFDIAC----------YK 188 (270)
Q Consensus 160 ~~-------------~~~~~~-~~~----------------~---------~~--~~~~~~~~~~~~~----------~~ 188 (270)
.. ...... ..+ . +. ............. +.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T 2cjp_A 164 RFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYR 243 (328)
T ss_dssp HTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHH
T ss_pred hhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHH
Confidence 00 000000 000 0 00 0000000000000 00
Q ss_pred C---CC--ChhhhhhhhheeeeEEEcCCCccCCHH----HH--HHHHHHhcCCc-eEEEecCCCcceeecchHhHHHHHH
Q 024228 189 L---PT--LPAFVYKHILEKIHLLWGENDKIFDMQ----VA--RNLKEQVGQNA-TMESIEKAGHLVNLERPFVYNRQLK 256 (270)
Q Consensus 189 ~---~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~----~~--~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~ 256 (270)
. .+ .......++.+|+|+|+|++|.++|++ .. +.+.+.++ +. ++++++++||+++.|+|+++++.|.
T Consensus 244 ~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 322 (328)
T 2cjp_A 244 ALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVP-LLEEVVVLEGAAHFVSQERPHEISKHIY 322 (328)
T ss_dssp THHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHST-TBCCCEEETTCCSCHHHHSHHHHHHHHH
T ss_pred hcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhc-CCeeEEEcCCCCCCcchhCHHHHHHHHH
Confidence 0 00 000012345599999999999999863 22 56667776 87 8999999999999999999999999
Q ss_pred HHHHh
Q 024228 257 TILAS 261 (270)
Q Consensus 257 ~fl~~ 261 (270)
+||++
T Consensus 323 ~fl~~ 327 (328)
T 2cjp_A 323 DFIQK 327 (328)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 99964
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=226.05 Aligned_cols=230 Identities=13% Similarity=0.095 Sum_probs=169.5
Q ss_pred EeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024228 26 IEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105 (270)
Q Consensus 26 i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 105 (270)
+++ +|.+++|...++ +++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+++++|+.++
T Consensus 4 ~~~-~g~~l~~~~~g~-~~~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 80 (264)
T 3ibt_A 4 LNV-NGTLMTYSESGD-PHAPTLFLLSGWCQDHR-LFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAF 80 (264)
T ss_dssp CEE-TTEECCEEEESC-SSSCEEEEECCTTCCGG-GGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHH
T ss_pred Eee-CCeEEEEEEeCC-CCCCeEEEEcCCCCcHh-HHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHHHHHHHH
Confidence 445 799999988876 45789999999999999 999999999888999999999999999887779999999999999
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCchhhhHhhhhccc---------hhhhhhcccccH
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVSNAALERIGY---------ESWVDFLLPKTA 175 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 175 (270)
+++++.++++++||||||.+++.+|.++ |++|+++|++++........... ...... ......+.....
T Consensus 81 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T 3ibt_A 81 IDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQ-LAEGQHPTEYVAGRQSFFDEWAETTDN 159 (264)
T ss_dssp HHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHH-HHHTTCTTTHHHHHHHHHHHHHTTCCC
T ss_pred HHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcch-hhcccChhhHHHHHHHHHHHhcccCCc
Confidence 9999999999999999999999999999 99999999999877222111111 100000 000000000000
Q ss_pred HHHHHHHHhhhhcC------------------CCChhhhhhhhheeeeEEEc--CCCccCCHHHHHHHHHHhcCCceEEE
Q 024228 176 DALKVQFDIACYKL------------------PTLPAFVYKHILEKIHLLWG--ENDKIFDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 176 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~P~l~i~g--~~D~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
......+....... .......+.++.+|+++++| +.|...+.+..+.+.+.++ +.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 238 (264)
T 3ibt_A 160 ADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHS-WFHPRH 238 (264)
T ss_dssp HHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCT-TEEEEE
T ss_pred HHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCC-CceEEE
Confidence 11111110000000 00112344556699999965 4555555677788888887 899999
Q ss_pred ecCCCcceeecchHhHHHHHHHHHH
Q 024228 236 IEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 236 ~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
++++||+++.++|+++++.|.+||+
T Consensus 239 i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 239 IPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp CCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred cCCCCCcchhhCHHHHHHHHHHHHh
Confidence 9999999999999999999999986
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=230.35 Aligned_cols=243 Identities=16% Similarity=0.241 Sum_probs=177.6
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHH-hhccceEEeecCCCCCCCCCCC---CCCChH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLA-LAKTYEVYVPDFLFFGSSVTDR---PDRTAS 96 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~-l~~~~~v~~~d~~g~G~s~~~~---~~~~~~ 96 (270)
++.++++++ +.+++|+..++ ++|+||++||++++.. .|..+++. +.++|+|+++|+||||.|+... ...+.+
T Consensus 3 ~~~~~~~~~-~~~~~~~~~~~--~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 78 (279)
T 4g9e_A 3 INYHELETS-HGRIAVRESEG--EGAPLLMIHGNSSSGA-IFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSME 78 (279)
T ss_dssp CEEEEEEET-TEEEEEEECCC--CEEEEEEECCTTCCGG-GGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHH
T ss_pred eEEEEEEcC-CceEEEEecCC--CCCeEEEECCCCCchh-HHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHH
Confidence 467788885 55888877764 5789999999999999 99999988 4445999999999999998753 337899
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc-------------
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY------------- 163 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~------------- 163 (270)
++++++.++++.++.++++++|||+||.+++.+|.++|+ +.++|+++++.................
T Consensus 79 ~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (279)
T 4g9e_A 79 GYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDV 157 (279)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHH
Confidence 999999999999999999999999999999999999998 999999887765432221110000000
Q ss_pred hhhh-hhcccccHHH------------HHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHH-HHhcC
Q 024228 164 ESWV-DFLLPKTADA------------LKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLK-EQVGQ 229 (270)
Q Consensus 164 ~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~-~~~~~ 229 (270)
.... .......... ...................+..+.+|+|+++|++|.++|++..+.+. +.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 236 (279)
T 4g9e_A 158 ESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLW- 236 (279)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBG-
T ss_pred HHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCC-
Confidence 0000 0000000000 01111111111122233445566699999999999999999988887 5665
Q ss_pred CceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhccCC
Q 024228 230 NATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANGQH 269 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~~~ 269 (270)
++++++++++||+++.++|+++.+.|.+||++......++
T Consensus 237 ~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~~~~ 276 (279)
T 4g9e_A 237 EGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQLEHHH 276 (279)
T ss_dssp GGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSSCCCC
T ss_pred CCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhhhhhh
Confidence 8899999999999999999999999999999887655544
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=226.12 Aligned_cols=236 Identities=18% Similarity=0.203 Sum_probs=179.7
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
.+....+.+ +|..++|...++ +|+||++||++++.. .|..+++.|+++|.|+++|+||+|.|.......+.++++
T Consensus 47 ~~~~~~~~~-~~~~~~~~~~g~---~p~vv~lhG~~~~~~-~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 121 (314)
T 3kxp_A 47 HFISRRVDI-GRITLNVREKGS---GPLMLFFHGITSNSA-VFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYA 121 (314)
T ss_dssp CCEEEEEEC-SSCEEEEEEECC---SSEEEEECCTTCCGG-GGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCCSHHHHH
T ss_pred CcceeeEEE-CCEEEEEEecCC---CCEEEEECCCCCCHH-HHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCCCHHHHH
Confidence 346667777 788999988766 789999999999998 999999999988999999999999999777778999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch--------h----hh
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE--------S----WV 167 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~--------~----~~ 167 (270)
+|+.+++++++.++++++|||+||.+++.+|.++|++++++|++++................... . ..
T Consensus 122 ~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (314)
T 3kxp_A 122 DDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLA 201 (314)
T ss_dssp HHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987654433222111111000 0 00
Q ss_pred hhcccccHHHHHHHHHhh--------------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHh
Q 024228 168 DFLLPKTADALKVQFDIA--------------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQV 227 (270)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 227 (270)
.................. ...........+.++.+|+|+++|++|.++|.+..+.+.+.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~ 281 (314)
T 3kxp_A 202 GRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLR 281 (314)
T ss_dssp HHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred hhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhC
Confidence 000000000011110000 000000223335566699999999999999999999999999
Q ss_pred cCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 228 GQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 228 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+ +.++++++++||+++.++|+++.+.|.+||++
T Consensus 282 ~-~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 282 P-DLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp T-TSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred C-CceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 7 89999999999999999999999999999974
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=224.61 Aligned_cols=213 Identities=18% Similarity=0.153 Sum_probs=154.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhC-CCceEEEEE
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLG-VEKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~ 119 (270)
+++++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+... ..++.+++++|+.+++++++ .++++|+||
T Consensus 8 ~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGh 86 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW-IWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGH 86 (264)
T ss_dssp -CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEE
T ss_pred CCCCeEEEECCCccccc-hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 46889999999999988 999999999765 999999999999997643 34789999999999999996 589999999
Q ss_pred chhHHHHHHHHhhCccccccEEEecccCCCCchhh----hHhhhhccc----h--------------------hh-hhhc
Q 024228 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS----NAALERIGY----E--------------------SW-VDFL 170 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~----~~~~~~~~~----~--------------------~~-~~~~ 170 (270)
||||.+++.+|.++|++|+++|++++......... ......... . .. ....
T Consensus 87 SmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 2wfl_A 87 SFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKM 166 (264)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHHT
T ss_pred ChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHHH
Confidence 99999999999999999999999987532111100 011110000 0 00 0000
Q ss_pred ccccHHHHHHHHHhhhhcC-----------CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCC
Q 024228 171 LPKTADALKVQFDIACYKL-----------PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 239 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (270)
.............. .... ...... ....+|+|+|+|++|.++|.+..+.+.+.++ +.++++++++
T Consensus 167 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~ 242 (264)
T 2wfl_A 167 FQNCSVEDLELAKM-LTRPGSLFFQDLAKAKKFSTE--RYGSVKRAYIFCNEDKSFPVEFQKWFVESVG-ADKVKEIKEA 242 (264)
T ss_dssp STTSCHHHHHHHHH-HCCCEECCHHHHTTSCCCCTT--TGGGSCEEEEEETTCSSSCHHHHHHHHHHHC-CSEEEEETTC
T ss_pred hcCCCHHHHHHHHh-ccCCCcccccccccccccChH--HhCCCCeEEEEeCCcCCCCHHHHHHHHHhCC-CceEEEeCCC
Confidence 00000000000000 0000 000000 0124899999999999999999999999998 8999999999
Q ss_pred CcceeecchHhHHHHHHHHHH
Q 024228 240 GHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 240 gH~~~~~~~~~~~~~i~~fl~ 260 (270)
||++++|+|+++++.|.+|++
T Consensus 243 gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 243 DHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp CSCHHHHSHHHHHHHHHHHHC
T ss_pred CCchhhcCHHHHHHHHHHHhh
Confidence 999999999999999999985
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=226.41 Aligned_cols=238 Identities=18% Similarity=0.225 Sum_probs=175.0
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCC-CCCCCCCCCCChHHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFF-GSSVTDRPDRTASFQ 98 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~-G~s~~~~~~~~~~~~ 98 (270)
..+..++++ +|.+++|+..++ +++|+||++||++++.. .|..+++.|+++|+|+++|+||+ |.|.......+.+++
T Consensus 44 ~~~~~~v~~-~~~~~~~~~~g~-~~~~~vv~lHG~~~~~~-~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~~~~~~ 120 (306)
T 2r11_A 44 RCKSFYIST-RFGQTHVIASGP-EDAPPLVLLHGALFSST-MWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDY 120 (306)
T ss_dssp CCEEEEECC-TTEEEEEEEESC-TTSCEEEEECCTTTCGG-GGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCCCHHHH
T ss_pred CcceEEEec-CCceEEEEeeCC-CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCCCHHHH
Confidence 356777777 466888887765 45799999999999999 99999999988899999999999 888876667899999
Q ss_pred HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc------chhhhhhccc
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG------YESWVDFLLP 172 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 172 (270)
++|+.++++.++.++++|+|||+||.+++.+|.++|++|+++|++++................. ..........
T Consensus 121 ~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (306)
T 2r11_A 121 ANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNWMMN 200 (306)
T ss_dssp HHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999887543221110000000 0000000000
Q ss_pred c---cHH---HHHHHHHhhh-----hc-C-----CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH-HhcCCceEE
Q 024228 173 K---TAD---ALKVQFDIAC-----YK-L-----PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE-QVGQNATME 234 (270)
Q Consensus 173 ~---~~~---~~~~~~~~~~-----~~-~-----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~ 234 (270)
. ... .......... +. . .......+.++.+|+|+++|++|.++|.+....+.+ .++ +++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~ 279 (306)
T 2r11_A 201 DQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVP-DIEAE 279 (306)
T ss_dssp TCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHHST-TCEEE
T ss_pred CccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHHCC-CCEEE
Confidence 0 000 0000000000 00 0 012234456666999999999999999988876555 455 89999
Q ss_pred EecCCCcceeecchHhHHHHHHHHHHh
Q 024228 235 SIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 235 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+++++||+++.++|+++.+.|.+||++
T Consensus 280 ~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 280 VIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp EETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 999999999999999999999999963
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=227.39 Aligned_cols=214 Identities=18% Similarity=0.242 Sum_probs=158.8
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC---C-CCChHHHHHHHHHHHHHhCCCceEEEEEc
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR---P-DRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~---~-~~~~~~~~~~~~~~l~~~~~~~~~l~G~S 120 (270)
+|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+... . .++++.+++|+.+++++++.++++|+|||
T Consensus 20 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS 98 (271)
T 1wom_A 20 KASIMFAPGFGCDQS-VWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHS 98 (271)
T ss_dssp SSEEEEECCTTCCGG-GGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCcEEEEcCCCCchh-hHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCCCeEEEEeC
Confidence 589999999999998 999999999888999999999999998653 1 25789999999999999999999999999
Q ss_pred hhHHHHHHHHhhCccccccEEEecccCCCCchh-------h----hHhhhhc--cchhhh----h-hcc-cccH---HHH
Q 024228 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-------S----NAALERI--GYESWV----D-FLL-PKTA---DAL 178 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-------~----~~~~~~~--~~~~~~----~-~~~-~~~~---~~~ 178 (270)
|||.+++.+|.++|++|+++|++++........ . ....... ....+. . ... .... ..+
T Consensus 99 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (271)
T 1wom_A 99 VGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEEL 178 (271)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 999999999999999999999998864321100 0 0000000 000000 0 000 0000 000
Q ss_pred HHHHH-----------hhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 179 KVQFD-----------IACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 179 ~~~~~-----------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
...+. .... .......+..+.+|+|+|+|++|.++|.+..+.+.+.++ +.++++++++||+++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~ 255 (271)
T 1wom_A 179 ESRFCSTDPVIARQFAKAAF--FSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP-YSSLKQMEARGHCPHMSH 255 (271)
T ss_dssp HHHHHHSCHHHHHHHHHHHH--SCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS-SEEEEEEEEESSCHHHHC
T ss_pred HHHHhcCCcHHHHHHHHHHh--CcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC-CCEEEEeCCCCcCccccC
Confidence 00000 0000 111223455666999999999999999999999999998 899999999999999999
Q ss_pred hHhHHHHHHHHHHhh
Q 024228 248 PFVYNRQLKTILASL 262 (270)
Q Consensus 248 ~~~~~~~i~~fl~~~ 262 (270)
|+++++.|.+||+++
T Consensus 256 p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 256 PDETIQLIGDYLKAH 270 (271)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999764
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=228.40 Aligned_cols=231 Identities=16% Similarity=0.202 Sum_probs=172.7
Q ss_pred EeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 26 IEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 26 i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+++ +|.+++|...++ +|+||++||++++.. .|..+++.|.+ +|+|+++|+||||.|..... .+.+++++|+.
T Consensus 6 ~~~-~g~~l~y~~~g~---~~~vv~lhG~~~~~~-~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~ 79 (272)
T 3fsg_A 6 EYL-TRSNISYFSIGS---GTPIIFLHGLSLDKQ-STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-STSDNVLETLI 79 (272)
T ss_dssp CEE-CTTCCEEEEECC---SSEEEEECCTTCCHH-HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-CSHHHHHHHHH
T ss_pred EEe-cCCeEEEEEcCC---CCeEEEEeCCCCcHH-HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC-CCHHHHHHHHH
Confidence 455 788999988774 789999999999999 99999999988 49999999999999998776 89999999999
Q ss_pred HHHHH-hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH----------hhhhcc---chhhhhh
Q 024228 104 KGLRK-LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA----------ALERIG---YESWVDF 169 (270)
Q Consensus 104 ~~l~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~----------~~~~~~---~~~~~~~ 169 (270)
+++++ ++.++++|+|||+||.+|+.+|.++|++|+++|+++|........... ...... .......
T Consensus 80 ~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (272)
T 3fsg_A 80 EAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSM 159 (272)
T ss_dssp HHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHH
T ss_pred HHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHH
Confidence 99999 788999999999999999999999999999999999876432211000 000000 0000000
Q ss_pred cccccHHH---HHH------------HHHhhhhcCCCC--hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCce
Q 024228 170 LLPKTADA---LKV------------QFDIACYKLPTL--PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNAT 232 (270)
Q Consensus 170 ~~~~~~~~---~~~------------~~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 232 (270)
........ +.. ............ ....+..+.+|+++++|++|.++|++..+.+.+.++ +++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~ 238 (272)
T 3fsg_A 160 NVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNE-NGE 238 (272)
T ss_dssp CSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCT-TEE
T ss_pred hccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcC-CCe
Confidence 00000000 000 000000000111 111234556999999999999999999999998887 899
Q ss_pred EEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 233 MESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 233 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
+++++++||+++.++|+++.+.|.+||++..
T Consensus 239 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 239 IVLLNRTGHNLMIDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp EEEESSCCSSHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCchhcCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998765
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=221.08 Aligned_cols=227 Identities=16% Similarity=0.067 Sum_probs=169.5
Q ss_pred EEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
..+...+|.+++|...++ +|+||++||++++.. .|..+++.|+++|+|+++|+||||.|+... .++.+++++|+.
T Consensus 5 ~~~~~~~g~~l~~~~~g~---~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~-~~~~~~~~~~~~ 79 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSGS---GPPVVLVGGALSTRA-GGAPLAERLAPHFTVICYDRRGRGDSGDTP-PYAVEREIEDLA 79 (262)
T ss_dssp CEEECTTSCEEEEEEEEC---SSEEEEECCTTCCGG-GGHHHHHHHTTTSEEEEECCTTSTTCCCCS-SCCHHHHHHHHH
T ss_pred heEEcCCCcEEEEEEcCC---CCcEEEECCCCcChH-HHHHHHHHHhcCcEEEEEecCCCcCCCCCC-CCCHHHHHHHHH
Confidence 345566899999988875 789999999999999 999999999966999999999999998765 789999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-------hHhhhhc---cchh----hhhh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------NAALERI---GYES----WVDF 169 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------~~~~~~~---~~~~----~~~~ 169 (270)
+++++++ ++++++|||+||.+++.+|.++| +|+++|++++......... ....... .... +...
T Consensus 80 ~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (262)
T 3r0v_A 80 AIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTE 157 (262)
T ss_dssp HHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHHHHHhhc
Confidence 9999999 99999999999999999999999 9999999998765432110 0000000 0000 0000
Q ss_pred cccccHHHHHHHH-----------------HhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCce
Q 024228 170 LLPKTADALKVQF-----------------DIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNAT 232 (270)
Q Consensus 170 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 232 (270)
............. ..............+.++.+|+++++|++|.++|++..+.+.+.++ +++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~ 236 (262)
T 3r0v_A 158 GVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIP-NAR 236 (262)
T ss_dssp TSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHST-TEE
T ss_pred ccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCC-CCe
Confidence 0000000000000 0000011122234555666999999999999999999999999997 899
Q ss_pred EEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 233 MESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 233 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+++++++|| +++|+++.+.|.+||++
T Consensus 237 ~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 237 YVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp EEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred EEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 999999999 47899999999999863
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=223.69 Aligned_cols=218 Identities=20% Similarity=0.117 Sum_probs=156.5
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhC-CCceEEEEEc
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLG-VEKCTLVGVS 120 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S 120 (270)
++++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+... ..++.+++++|+.+++++++ .++++|+|||
T Consensus 3 ~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 81 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHS 81 (273)
T ss_dssp CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEET
T ss_pred CCCeEEEECCCCCCcc-hHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhccCCCEEEEecC
Confidence 4689999999999988 999999999865 999999999999998643 34789999999999999997 5899999999
Q ss_pred hhHHHHHHHHhhCccccccEEEecccCCCCchhh----hHhhhhccchhh-------------------------hhhcc
Q 024228 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS----NAALERIGYESW-------------------------VDFLL 171 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~-------------------------~~~~~ 171 (270)
|||.+++.+|.++|++|+++|++++......... ............ .....
T Consensus 82 mGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T 1xkl_A 82 LGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLY 161 (273)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTS
T ss_pred HHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHHhh
Confidence 9999999999999999999999997532211110 011110000000 00000
Q ss_pred cccHHHHHHHHHhhhhcC-CCChhh------h--hhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcc
Q 024228 172 PKTADALKVQFDIACYKL-PTLPAF------V--YKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHL 242 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~-~~~~~~------~--~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 242 (270)
............. .... ...... . .....+|+++|+|++|.++|++.++.+.+.++ +.++++++++||+
T Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p-~~~~~~i~~aGH~ 239 (273)
T 1xkl_A 162 QLCSPEDLALASS-LVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG-VTEAIEIKGADHM 239 (273)
T ss_dssp TTSCHHHHHHHHH-HCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHC-CSEEEEETTCCSC
T ss_pred ccCCHHHHHHHHH-hcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCC-CCeEEEeCCCCCC
Confidence 0000000000000 0000 000000 0 00124899999999999999999999999998 8999999999999
Q ss_pred eeecchHhHHHHHHHHHHhhhh
Q 024228 243 VNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 243 ~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
+++|+|+++++.|.+|+++...
T Consensus 240 ~~~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 240 AMLCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp HHHHSHHHHHHHHHHHHHHCC-
T ss_pred chhcCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999987643
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=226.64 Aligned_cols=236 Identities=14% Similarity=0.113 Sum_probs=175.0
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC----CChHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD----RTASF 97 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----~~~~~ 97 (270)
+..++++ +|.+++|...++ +|+||++||++++.. .|..+++.|+++|+|+++|+||||.|+.+... ++.++
T Consensus 9 ~~~~~~~-~g~~l~~~~~g~---~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (297)
T 2qvb_A 9 QPKYLEI-AGKRMAYIDEGK---GDAIVFQHGNPTSSY-LWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGE 83 (297)
T ss_dssp CCEEEEE-TTEEEEEEEESS---SSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHH
T ss_pred CceEEEE-CCEEEEEEecCC---CCeEEEECCCCchHH-HHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcCHHH
Confidence 4456666 799999988876 799999999999998 99999999988899999999999999877555 89999
Q ss_pred HHHHHHHHHHHhCC-CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-----hhhHhhhhccch-------
Q 024228 98 QAECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-----VSNAALERIGYE------- 164 (270)
Q Consensus 98 ~~~~~~~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-----~~~~~~~~~~~~------- 164 (270)
+++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++....... ........+...
T Consensus 84 ~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (297)
T 2qvb_A 84 QRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMAL 163 (297)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHHHH
T ss_pred HHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhhhc
Confidence 99999999999999 99999999999999999999999999999999987642110 000000000000
Q ss_pred ---hhhhhc------ccccHHHHHH-----------------HHHhhhhc--------CCCChhhhhhhhheeeeEEEcC
Q 024228 165 ---SWVDFL------LPKTADALKV-----------------QFDIACYK--------LPTLPAFVYKHILEKIHLLWGE 210 (270)
Q Consensus 165 ---~~~~~~------~~~~~~~~~~-----------------~~~~~~~~--------~~~~~~~~~~~~~~P~l~i~g~ 210 (270)
...... .......... ........ ........+..+.+|+|+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 243 (297)
T 2qvb_A 164 EHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAE 243 (297)
T ss_dssp TTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEE
T ss_pred cccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEecC
Confidence 000000 0000000011 00000000 0000122334455999999999
Q ss_pred CCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhh
Q 024228 211 NDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 211 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
+|.++|.+..+.+.+.++ + +++++ ++||+++.++|+++.+.|.+||+++...
T Consensus 244 ~D~~~~~~~~~~~~~~~~-~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~~~~ 295 (297)
T 2qvb_A 244 PGAIITGRIRDYVRSWPN-Q-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRLRSA 295 (297)
T ss_dssp ECSSSCHHHHHHHHTSSS-E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcC-C-eEEEe-cCccchhhhCHHHHHHHHHHHHHHHhhc
Confidence 999999999999998887 7 99999 9999999999999999999999987654
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=227.07 Aligned_cols=239 Identities=17% Similarity=0.143 Sum_probs=167.0
Q ss_pred cCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-----C
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-----D 92 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-----~ 92 (270)
..+++...+.+ +|.+++|...++ +|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|+.... .
T Consensus 10 ~~~~~~~~~~~-~g~~l~~~~~g~---~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~ 84 (306)
T 3r40_A 10 FPGFGSEWINT-SSGRIFARVGGD---GPPLLLLHGFPQTHV-MWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTP 84 (306)
T ss_dssp STTCEEEEECC-TTCCEEEEEEEC---SSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGG
T ss_pred ccCCceEEEEe-CCEEEEEEEcCC---CCeEEEECCCCCCHH-HHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCC
Confidence 34677778877 799999988774 789999999999999 9999999999999999999999999998776 5
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh--hHh-------------
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS--NAA------------- 157 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~--~~~------------- 157 (270)
++.+++++|+.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++......... ...
T Consensus 85 ~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (306)
T 3r40_A 85 YTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQP 164 (306)
T ss_dssp GSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcc
Confidence 78999999999999999999999999999999999999999999999999997543211000 000
Q ss_pred -------hhhc---cchhhhhh------cccccHHHHHHHHHhh-----------hhcC--CCChh------hhhhhhhe
Q 024228 158 -------LERI---GYESWVDF------LLPKTADALKVQFDIA-----------CYKL--PTLPA------FVYKHILE 202 (270)
Q Consensus 158 -------~~~~---~~~~~~~~------~~~~~~~~~~~~~~~~-----------~~~~--~~~~~------~~~~~~~~ 202 (270)
.... ........ ................ .+.. ..... ..+..+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 244 (306)
T 3r40_A 165 APLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPV 244 (306)
T ss_dssp TTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCS
T ss_pred cchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCCc
Confidence 0000 00000000 0000000111100000 0000 00000 02345559
Q ss_pred eeeEEEcCCCccCC-HHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 203 KIHLLWGENDKIFD-MQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 203 P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
|+++++|++|.++| ....+.+.+..+ +.+++++ ++||+++.++|+++++.|.+||++..
T Consensus 245 P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 245 PMLALWGASGIAQSAATPLDVWRKWAS-DVQGAPI-ESGHFLPEEAPDQTAEALVRFFSAAP 304 (306)
T ss_dssp CEEEEEETTCC------CHHHHHHHBS-SEEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC--
T ss_pred ceEEEEecCCcccCchhHHHHHHhhcC-CCeEEEe-cCCcCchhhChHHHHHHHHHHHHhcc
Confidence 99999999999998 445555555555 8999999 68999999999999999999998753
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=222.98 Aligned_cols=234 Identities=17% Similarity=0.207 Sum_probs=174.2
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC--CCCCh
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PDRTA 95 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~ 95 (270)
.+++++.+.+ +|.+++|...++ +++|+||++||++++.. .|..+++.|.+. |.|+++|+||+|.|.... ..++.
T Consensus 2 ~~~~~~~~~~-~g~~l~~~~~g~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~ 78 (286)
T 3qit_A 2 NAMEEKFLEF-GGNQICLCSWGS-PEHPVVLCIHGILEQGL-AWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSS 78 (286)
T ss_dssp CCCEEEEEEE-TTEEEEEEEESC-TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSH
T ss_pred chhhhheeec-CCceEEEeecCC-CCCCEEEEECCCCcccc-hHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCH
Confidence 3577888888 799999998876 45789999999999999 999999999998 999999999999999776 56889
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh----Hhhhhcc---------
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN----AALERIG--------- 162 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~----~~~~~~~--------- 162 (270)
+++++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++.......... .......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (286)
T 3qit_A 79 LTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHP 158 (286)
T ss_dssp HHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999988664432200 0000000
Q ss_pred -chh------hhhhcccccHHH-HHHHHHhhhhc--------------------------CCCChhhhhhhhheeeeEEE
Q 024228 163 -YES------WVDFLLPKTADA-LKVQFDIACYK--------------------------LPTLPAFVYKHILEKIHLLW 208 (270)
Q Consensus 163 -~~~------~~~~~~~~~~~~-~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~P~l~i~ 208 (270)
... ............ ........... ........+.++.+|+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 238 (286)
T 3qit_A 159 IFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVY 238 (286)
T ss_dssp CBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEE
T ss_pred ccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCCCeEEEE
Confidence 000 000000000000 11111000000 00001122344559999999
Q ss_pred cCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHH
Q 024228 209 GENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKT 257 (270)
Q Consensus 209 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 257 (270)
|++|.++|.+..+.+.+.++ +.+++++++ ||+++.++|+++++.|.+
T Consensus 239 g~~D~~~~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 239 GDSSKLNRPEDLQQQKMTMT-QAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp ETTCCSSCHHHHHHHHHHST-TSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred eCCCcccCHHHHHHHHHHCC-CCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 99999999999999999998 899999999 999999999999888763
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=222.48 Aligned_cols=239 Identities=19% Similarity=0.197 Sum_probs=171.8
Q ss_pred ceeEEEeecCC--eEEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCCh
Q 024228 21 MTQRTIEIEPG--TILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g--~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~ 95 (270)
.+...+.. +| ..++|+..++ .+++|+||++||++++.. .|..+++.|.++ |+|+++|+||+|.|..... ..+.
T Consensus 20 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 97 (315)
T 4f0j_A 20 VHYLDFTS-QGQPLSMAYLDVAPKKANGRTILLMHGKNFCAG-TWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSF 97 (315)
T ss_dssp CEEEEEEE-TTEEEEEEEEEECCSSCCSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCH
T ss_pred ceeEEEec-CCCCeeEEEeecCCCCCCCCeEEEEcCCCCcch-HHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCH
Confidence 34444544 44 4456665544 356899999999999999 999999999997 9999999999999987765 6899
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-------hHhhhhc---cchh
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------NAALERI---GYES 165 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------~~~~~~~---~~~~ 165 (270)
+++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++......... ....... ....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
T 4f0j_A 98 QQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEG 177 (315)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCChHH
Confidence 99999999999999999999999999999999999999999999999998643221100 0000000 0000
Q ss_pred h----hhhc-c---cccHHHHHHHHHhhhhc-----------------CCCChhhhhhhhheeeeEEEcCCCccCC----
Q 024228 166 W----VDFL-L---PKTADALKVQFDIACYK-----------------LPTLPAFVYKHILEKIHLLWGENDKIFD---- 216 (270)
Q Consensus 166 ~----~~~~-~---~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~---- 216 (270)
. .... . ................. ........+.++.+|+|+++|++|.++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~ 257 (315)
T 4f0j_A 178 IRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDA 257 (315)
T ss_dssp HHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGG
T ss_pred HHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCccccc
Confidence 0 0000 0 00000000000000000 0001122345556999999999999999
Q ss_pred ------------HHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 217 ------------MQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 217 ------------~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.+..+.+.+.++ ++++++++++||+++.++|+++++.|.+||++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 258 APAELKARLGNYAQLGKDAARRIP-QATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp SCHHHHTTSCCHHHHHHHHHHHST-TEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred cccccccccccchhhhhHHHhhcC-CceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 788889998887 999999999999999999999999999999753
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=223.26 Aligned_cols=214 Identities=18% Similarity=0.125 Sum_probs=154.7
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhC-CCceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLG-VEKCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~ 121 (270)
+++|||+||++.+.. .|..+++.|++. |+|+++|+||||.|+... ..++++++++|+.+++++++ .++++|+||||
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (257)
T 3c6x_A 3 FAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESC 81 (257)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEET
T ss_pred CCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccccCCeEEEEECc
Confidence 578999999999988 999999999876 999999999999997643 34799999999999999995 57999999999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCCCchhh----hHhhhhcc-c-hhh---------------------hhhccccc
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS----NAALERIG-Y-ESW---------------------VDFLLPKT 174 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~----~~~~~~~~-~-~~~---------------------~~~~~~~~ 174 (270)
||.+++.+|.++|++|+++|++++......... ........ . ... ........
T Consensus 82 GG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T 3c6x_A 82 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLC 161 (257)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTS
T ss_pred chHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHHHHhcCC
Confidence 999999999999999999999998532111100 01110000 0 000 00000000
Q ss_pred HHHHHHHHHhhhhcC-CCChhh-----h---hhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee
Q 024228 175 ADALKVQFDIACYKL-PTLPAF-----V---YKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 245 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~-~~~~~~-----~---~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 245 (270)
.......... .... ...... . .....+|+|+|+|++|.++|++.++.+.+.++ +.++++++++||++++
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~-~~~~~~i~~~gH~~~~ 239 (257)
T 3c6x_A 162 GPEEYELAKM-LTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK-PDKVYKVEGGDHKLQL 239 (257)
T ss_dssp CHHHHHHHHH-HCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC-CSEEEECCSCCSCHHH
T ss_pred CHHHHHHHHH-hcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCC-CCeEEEeCCCCCCccc
Confidence 0000000000 0000 000000 0 00114899999999999999999999999998 8999999999999999
Q ss_pred cchHhHHHHHHHHHHh
Q 024228 246 ERPFVYNRQLKTILAS 261 (270)
Q Consensus 246 ~~~~~~~~~i~~fl~~ 261 (270)
|+|+++++.|.+|+++
T Consensus 240 e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 240 TKTKEIAEILQEVADT 255 (257)
T ss_dssp HSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999975
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=230.55 Aligned_cols=236 Identities=14% Similarity=0.191 Sum_probs=168.1
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAE 100 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~ 100 (270)
+..++.+ +|.+++|...++ +++|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+.. .++.+++++
T Consensus 22 ~~~~~~~-~g~~l~y~~~G~-g~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~ 98 (318)
T 2psd_A 22 RCKQMNV-LDSFINYYDSEK-HAENAVIFLHGNATSSY-LWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYK 98 (318)
T ss_dssp HCEEEEE-TTEEEEEEECCS-CTTSEEEEECCTTCCGG-GGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSHHHHHH
T ss_pred cceEEee-CCeEEEEEEcCC-CCCCeEEEECCCCCcHH-HHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCHHHHHH
Confidence 3456666 799999988775 33569999999999998 9999999998889999999999999987643 478999999
Q ss_pred HHHHHHHHhCC-CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC---chhhh--Hhhhhccc-----------
Q 024228 101 CMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT---ESVSN--AALERIGY----------- 163 (270)
Q Consensus 101 ~~~~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~---~~~~~--~~~~~~~~----------- 163 (270)
|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++..... ..... ........
T Consensus 99 dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (318)
T 2psd_A 99 YLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENN 178 (318)
T ss_dssp HHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHHHHTTTC
T ss_pred HHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchhhhhcch
Confidence 99999999998 899999999999999999999999999999988642211 00000 00000000
Q ss_pred ---hhhh-hhcccc-cHHHHHHHHHhh------------hhcCC---C-C----------hhhhhhhh-heeeeEEEcCC
Q 024228 164 ---ESWV-DFLLPK-TADALKVQFDIA------------CYKLP---T-L----------PAFVYKHI-LEKIHLLWGEN 211 (270)
Q Consensus 164 ---~~~~-~~~~~~-~~~~~~~~~~~~------------~~~~~---~-~----------~~~~~~~~-~~P~l~i~g~~ 211 (270)
.... ...... ............ ..... . . ....+..+ .+|+|+|+|++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~ 258 (318)
T 2psd_A 179 FFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDP 258 (318)
T ss_dssp HHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEE
T ss_pred HHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEecc
Confidence 0000 000000 000000000000 00000 0 0 01123345 69999999999
Q ss_pred CccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 212 DKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
| ++++ .++.+.+.++ +.+++++ ++||+++.|+|+++++.|.+||++...
T Consensus 259 D-~~~~-~~~~~~~~~~-~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 259 G-FFSN-AIVEGAKKFP-NTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERVLK 307 (318)
T ss_dssp C-SSHH-HHHHHHTTSS-SEEEEEE-EESSSGGGTCHHHHHHHHHHHHHHHHC
T ss_pred c-cCcH-HHHHHHHhCC-CcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHhhc
Confidence 9 8887 8888888887 8888888 679999999999999999999987653
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=227.30 Aligned_cols=239 Identities=13% Similarity=0.102 Sum_probs=175.2
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC----CChHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD----RTASFQ 98 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----~~~~~~ 98 (270)
...+.. +|.+++|...++ +|+||++||++++.. .|..+++.|++.|+|+++|+||||.|..+... ++.+++
T Consensus 11 ~~~~~~-~g~~l~~~~~g~---~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 85 (302)
T 1mj5_A 11 KKFIEI-KGRRMAYIDEGT---GDPILFQHGNPTSSY-LWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEH 85 (302)
T ss_dssp CEEEEE-TTEEEEEEEESC---SSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred ceEEEE-CCEEEEEEEcCC---CCEEEEECCCCCchh-hhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCcccccHHHH
Confidence 345555 799999988875 789999999999998 99999999988899999999999999977555 899999
Q ss_pred HHHHHHHHHHhCC-CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-----hhhHhhhhccch--------
Q 024228 99 AECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-----VSNAALERIGYE-------- 164 (270)
Q Consensus 99 ~~~~~~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-----~~~~~~~~~~~~-------- 164 (270)
++|+.+++++++. ++++++|||+||.+++.+|.++|++|+++|++++....... ............
T Consensus 86 ~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (302)
T 1mj5_A 86 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQ 165 (302)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTT
T ss_pred HHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhhhcC
Confidence 9999999999998 99999999999999999999999999999999987642210 000000000000
Q ss_pred --hhhhhc------ccccHHHHHHHHHhh------------hhcCCC-------------ChhhhhhhhheeeeEEEcCC
Q 024228 165 --SWVDFL------LPKTADALKVQFDIA------------CYKLPT-------------LPAFVYKHILEKIHLLWGEN 211 (270)
Q Consensus 165 --~~~~~~------~~~~~~~~~~~~~~~------------~~~~~~-------------~~~~~~~~~~~P~l~i~g~~ 211 (270)
...... ..........+.... ...... .....+.++.+|+|+++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~ 245 (302)
T 1mj5_A 166 DNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEP 245 (302)
T ss_dssp TCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred hHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEEeCC
Confidence 000000 000001111100000 000000 00122334559999999999
Q ss_pred CccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhccCC
Q 024228 212 DKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANGQH 269 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~~~ 269 (270)
|.++|++..+.+.+.++ + +++++ ++||+++.++|+++++.|.+|+++.......|
T Consensus 246 D~~~~~~~~~~~~~~~~-~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~~ 300 (302)
T 1mj5_A 246 GALTTGRMRDFCRTWPN-Q-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLRPAHHHH 300 (302)
T ss_dssp CSSSSHHHHHHHTTCSS-E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHSCCCC--
T ss_pred CCCCChHHHHHHHHhcC-C-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhccccccc
Confidence 99999999999988887 6 99999 99999999999999999999999877655444
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=220.54 Aligned_cols=216 Identities=17% Similarity=0.116 Sum_probs=159.8
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChHHHHHHHHHHHHHhCC-CceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLRKLGV-EKCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~ 121 (270)
+|+||++||++++.. .|..+++.|+++ |+|+++|+||||.|+.+.. .++.+++++|+.+++++++. ++++|+|||+
T Consensus 4 g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~ 82 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAW-IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFSF 82 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCTTCCEEEEEETT
T ss_pred CCcEEEECCCCCccc-cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcccCceEEEEeCh
Confidence 589999999999999 999999999988 9999999999999987654 48999999999999999987 8999999999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc---------------------------chhhhhhccccc
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG---------------------------YESWVDFLLPKT 174 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~ 174 (270)
||.+++.+|.++|++|+++|++++................. .......+....
T Consensus 83 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (258)
T 3dqz_A 83 GGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNC 162 (258)
T ss_dssp HHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTS
T ss_pred hHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhccC
Confidence 99999999999999999999999865443222111110000 000000000111
Q ss_pred HHHHHHHHHhhhhcCCC--------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 175 ADALKVQFDIACYKLPT--------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
................. ..........+|+++++|++|.++|++..+.+.+.++ +.++++++++||+++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~ 241 (258)
T 3dqz_A 163 PIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFN-VSKVYEIDGGDHMVMLS 241 (258)
T ss_dssp CHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSC-CSCEEEETTCCSCHHHH
T ss_pred CHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCC-cccEEEcCCCCCchhhc
Confidence 01111111100000000 0000011113899999999999999999999999998 88999999999999999
Q ss_pred chHhHHHHHHHHHHhh
Q 024228 247 RPFVYNRQLKTILASL 262 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~~ 262 (270)
+|+++++.|.+|+++.
T Consensus 242 ~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 242 KPQKLFDSLSAIATDY 257 (258)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHh
Confidence 9999999999999864
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=222.91 Aligned_cols=228 Identities=20% Similarity=0.182 Sum_probs=170.2
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHH-HHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQ-FQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
+|.+++|...++ +|+||++||++++.. .|. .++..|.+. |+|+++|+||+|.|... ..++.+++++|+.++++
T Consensus 31 ~~~~l~y~~~g~---~~~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~-~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 31 RVINLAYDDNGT---GDPVVFIAGRGGAGR-TWHPHQVPAFLAAGYRCITFDNRGIGATENA-EGFTTQTMVADTAALIE 105 (293)
T ss_dssp CEEEEEEEEECS---SEEEEEECCTTCCGG-GGTTTTHHHHHHTTEEEEEECCTTSGGGTTC-CSCCHHHHHHHHHHHHH
T ss_pred ccceEEEEEcCC---CCEEEEECCCCCchh-hcchhhhhhHhhcCCeEEEEccCCCCCCCCc-ccCCHHHHHHHHHHHHH
Confidence 678899988774 789999999999999 998 677777555 99999999999998754 45799999999999999
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc-----------h---hhhhhccc-
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY-----------E---SWVDFLLP- 172 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~- 172 (270)
+++.++++|+|||+||.+++.+|.++|++|+++|++++.................. . ........
T Consensus 106 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (293)
T 3hss_A 106 TLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRK 185 (293)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHH
T ss_pred hcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccc
Confidence 99999999999999999999999999999999999998865432211100000000 0 00000000
Q ss_pred --ccHHHHHHHHHh---------------hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEE
Q 024228 173 --KTADALKVQFDI---------------ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 173 --~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
............ ............+.++.+|+++++|++|.++|++..+.+.+.++ +.++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~ 264 (293)
T 3hss_A 186 TLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALP-NGRYLQ 264 (293)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST-TEEEEE
T ss_pred cccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCC-CceEEE
Confidence 000000000000 00111122233455566999999999999999999999999997 899999
Q ss_pred ecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 236 IEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 236 ~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++++||+++.++|+++.+.|.+||++..
T Consensus 265 ~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 265 IPDAGHLGFFERPEAVNTAMLKFFASVK 292 (293)
T ss_dssp ETTCCTTHHHHSHHHHHHHHHHHHHTCC
T ss_pred eCCCcchHhhhCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999998753
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=219.49 Aligned_cols=218 Identities=15% Similarity=0.075 Sum_probs=161.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHh-CCCceEEEEE
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKL-GVEKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~l~G~ 119 (270)
.++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+..... ++.+++++|+.++++++ +.++++|+||
T Consensus 10 ~~~~~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 88 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW-CWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKIILVGH 88 (267)
T ss_dssp CCCCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCTTSCEEEEEE
T ss_pred CCCCeEEEECCCCCCcc-hHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 45799999999999999 999999999987 99999999999999977544 89999999999999999 4889999999
Q ss_pred chhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc--c--------ch-----------------hhhhhccc
Q 024228 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI--G--------YE-----------------SWVDFLLP 172 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~--~--------~~-----------------~~~~~~~~ 172 (270)
||||.+++.+|.++|++|+++|++++................ . .. .....+..
T Consensus 89 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (267)
T 3sty_A 89 ALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYH 168 (267)
T ss_dssp TTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHHTST
T ss_pred cHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHhhcc
Confidence 999999999999999999999999987654332211111111 0 00 00000000
Q ss_pred ccHHHHHHHHHhhhhcCCCCh---------hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcce
Q 024228 173 KTADALKVQFDIACYKLPTLP---------AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 243 (270)
..................... ........+|+++|+|++|.++|++..+.+.+.++ ++++++++++||++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~ 247 (267)
T 3sty_A 169 LSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNP-PDEVKEIEGSDHVT 247 (267)
T ss_dssp TSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSC-CSEEEECTTCCSCH
T ss_pred cCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCC-CceEEEeCCCCccc
Confidence 110111111111000000000 00000113899999999999999999999999998 89999999999999
Q ss_pred eecchHhHHHHHHHHHHhh
Q 024228 244 NLERPFVYNRQLKTILASL 262 (270)
Q Consensus 244 ~~~~~~~~~~~i~~fl~~~ 262 (270)
+.++|+++++.|.+|+++.
T Consensus 248 ~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 248 MMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHSHHHHHHHHHHHHHHC
T ss_pred cccChHHHHHHHHHHHHhc
Confidence 9999999999999999864
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=226.13 Aligned_cols=220 Identities=16% Similarity=0.174 Sum_probs=153.6
Q ss_pred EEEEEecCCCCCCc-eEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC
Q 024228 33 ILNIWVPKKTTKKH-AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV 111 (270)
Q Consensus 33 ~l~~~~~~~~~~~~-~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~ 111 (270)
+++|...|+ +| +|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.. ..++.+.+++++.+ .++
T Consensus 3 ~l~~~~~G~---g~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~l~~---~l~- 73 (258)
T 1m33_A 3 NIWWQTKGQ---GNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGF-GALSLADMAEAVLQ---QAP- 73 (258)
T ss_dssp CCCEEEECC---CSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTCCSC-CCCCHHHHHHHHHT---TSC-
T ss_pred ceEEEEecC---CCCeEEEECCCCCChH-HHHHHHHHhhcCcEEEEeeCCCCCCCCCC-CCcCHHHHHHHHHH---HhC-
Confidence 456766665 56 9999999999999 99999999988899999999999999876 56788877766544 445
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh-----h----hHhhhhcc--c----hhhhhh--ccccc
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-----S----NAALERIG--Y----ESWVDF--LLPKT 174 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-----~----~~~~~~~~--~----~~~~~~--~~~~~ 174 (270)
++++|+||||||.+|+.+|.++|++|+++|++++.+...... . ........ . ...... .....
T Consensus 74 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 1m33_A 74 DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTET 153 (258)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTT
T ss_pred CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcc
Confidence 799999999999999999999999999999998764321110 0 00000000 0 000000 00000
Q ss_pred -HHHHHHHHHhhhhcC---------------CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecC
Q 024228 175 -ADALKVQFDIACYKL---------------PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK 238 (270)
Q Consensus 175 -~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (270)
............... .......+.++.+|+++++|++|.++|.+..+.+.+.++ +.+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~ 232 (258)
T 1m33_A 154 ARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAK 232 (258)
T ss_dssp HHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT-TCEEEEETT
T ss_pred chhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCc-cceEEEeCC
Confidence 000000000000000 001112345566999999999999999888888887776 899999999
Q ss_pred CCcceeecchHhHHHHHHHHHHhh
Q 024228 239 AGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 239 ~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+||+++.++|+++++.|.+|+++.
T Consensus 233 ~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 233 AAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp CCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred CCCCccccCHHHHHHHHHHHHHhc
Confidence 999999999999999999999754
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=214.87 Aligned_cols=223 Identities=16% Similarity=0.203 Sum_probs=152.7
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH---HH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA---KG 105 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~---~~ 105 (270)
+|..++|. + ++++||++||++++.. .|..+++.|++. |+|+++|+||||.|......++.+.+++|+. ++
T Consensus 6 ~~~~~~~~--~---~~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~ 79 (247)
T 1tqh_A 6 PPKPFFFE--A---GERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEF 79 (247)
T ss_dssp CCCCEEEC--C---SSCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCeeeC--C---CCcEEEEECCCCCChH-HHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHH
Confidence 45555554 2 2688999999999999 999999999876 9999999999997754333467777766654 46
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh-hhHhhhhccchhhhhhcccccHHHHHHHHHh
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-SNAALERIGYESWVDFLLPKTADALKVQFDI 184 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (270)
+++++.++++|+||||||.+|+.+|.++| |+++|+++++....... ......... ...... ..............
T Consensus 80 l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 155 (247)
T 1tqh_A 80 LKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYA-REYKKR-EGKSEEQIEQEMEK 155 (247)
T ss_dssp HHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHH-HHHHHH-HTCCHHHHHHHHHH
T ss_pred HHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHH-HHhhcc-cccchHHHHhhhhc
Confidence 67778889999999999999999999998 99999877654321110 000000000 000000 00000000000000
Q ss_pred hhhcC-C---------CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEEEecCCCcceeecc-hHhHH
Q 024228 185 ACYKL-P---------TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLER-PFVYN 252 (270)
Q Consensus 185 ~~~~~-~---------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~-~~~~~ 252 (270)
..... . ......+.++.+|+|+++|++|.++|++.++.+++.++. ++++++++++||.++.++ |++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~ 235 (247)
T 1tqh_A 156 FKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLH 235 (247)
T ss_dssp HTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHH
Confidence 00000 0 001123445669999999999999999999999999972 369999999999999875 79999
Q ss_pred HHHHHHHHhh
Q 024228 253 RQLKTILASL 262 (270)
Q Consensus 253 ~~i~~fl~~~ 262 (270)
+.|.+||++.
T Consensus 236 ~~i~~Fl~~~ 245 (247)
T 1tqh_A 236 EDIYAFLESL 245 (247)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999999864
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=219.30 Aligned_cols=237 Identities=14% Similarity=0.093 Sum_probs=165.0
Q ss_pred eeEEEeecCCeEEEEEecCCCC-CCceEEEeCCCCCcccccHHH-----HHHHhhccceEEeecCCCCCCCCCCC-CC--
Q 024228 22 TQRTIEIEPGTILNIWVPKKTT-KKHAVVLLHPFGFDGILTWQF-----QVLALAKTYEVYVPDFLFFGSSVTDR-PD-- 92 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~-----~~~~l~~~~~v~~~d~~g~G~s~~~~-~~-- 92 (270)
..++..+ +|.+++|...++.. ++|+|||+||++++....|.. +++.|+++|+|+++|+||||.|.... ..
T Consensus 12 ~~~~~~~-~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~ 90 (286)
T 2qmq_A 12 HTHSVET-PYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQ 90 (286)
T ss_dssp EEEEEEE-TTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCC
T ss_pred ccccccc-CCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCC
Confidence 3445555 79999999888643 579999999999988722665 78889888999999999999876432 22
Q ss_pred -CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh--hhhcc---chhh
Q 024228 93 -RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA--LERIG---YESW 166 (270)
Q Consensus 93 -~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~--~~~~~---~~~~ 166 (270)
++.+++++|+.++++.++.++++|+|||+||.+++.+|.++|++|+++|++++............ ..... ....
T Consensus 91 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (286)
T 2qmq_A 91 YPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPDMI 170 (286)
T ss_dssp CCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTSCHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccccchHHH
Confidence 38999999999999999999999999999999999999999999999999998764322111000 00000 0000
Q ss_pred h-hhcc-------cccHHHHH-------------HHHHhhhhcCC-CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHH
Q 024228 167 V-DFLL-------PKTADALK-------------VQFDIACYKLP-TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLK 224 (270)
Q Consensus 167 ~-~~~~-------~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 224 (270)
. ..+. +.....+. .+......... ......+..+.+|+|+++|++|.++| ...+.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~ 249 (286)
T 2qmq_A 171 LGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVECNS 249 (286)
T ss_dssp HHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHH
T ss_pred HHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHHHH
Confidence 0 0000 00001111 11111000011 11123345566999999999999997 4444455
Q ss_pred HHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 225 EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 225 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+..+.++++++++++||+++.++|+++.+.|.+||+
T Consensus 250 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 250 KLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp HSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred HhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 444337899999999999999999999999999985
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=218.92 Aligned_cols=226 Identities=12% Similarity=0.114 Sum_probs=152.4
Q ss_pred eeEEEeecCCeEEEEEecCCC----CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCCCCCCh
Q 024228 22 TQRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRTA 95 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~~~~~~ 95 (270)
+...+.+.+|.+++|+..++. .++|+||++||++++.. .|..+++.|++. |+|+++|+||| |.|+.....++.
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~-~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~~ 86 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTM 86 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------CCCH
T ss_pred eEEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCch-HHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccceeh
Confidence 455777889999998776542 24689999999999999 999999999886 99999999999 999876667888
Q ss_pred HHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhhh
Q 024228 96 SFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVDF 169 (270)
Q Consensus 96 ~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 169 (270)
+.+++|+.++++.+ +.++++|+||||||.+|+.+|.+ | +++++|++++................ ........
T Consensus 87 ~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (305)
T 1tht_A 87 TTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPND 164 (305)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGGCCSE
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhhhhcchhhCccc
Confidence 89999988888765 77899999999999999999998 7 89999998875432111100000000 00000000
Q ss_pred c--ccccHHHHHHHHHhhhhcCCCC----hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcc
Q 024228 170 L--LPKTADALKVQFDIACYKLPTL----PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHL 242 (270)
Q Consensus 170 ~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~ 242 (270)
. ..... ....+..... ...+. ....+.++.+|+|+++|++|.++|++.++.+++.++ +++++++++++||.
T Consensus 165 ~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~ 242 (305)
T 1tht_A 165 LDFEGHKL-GSEVFVRDCF-EHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHD 242 (305)
T ss_dssp EEETTEEE-EHHHHHHHHH-HTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSC
T ss_pred cccccccc-CHHHHHHHHH-hccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCc
Confidence 0 00000 0011111100 01111 123455666999999999999999999999998775 37899999999999
Q ss_pred eeecchHhHHH
Q 024228 243 VNLERPFVYNR 253 (270)
Q Consensus 243 ~~~~~~~~~~~ 253 (270)
++ ++|+.+.+
T Consensus 243 ~~-e~p~~~~~ 252 (305)
T 1tht_A 243 LG-ENLVVLRN 252 (305)
T ss_dssp TT-SSHHHHHH
T ss_pred hh-hCchHHHH
Confidence 86 88875433
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=220.27 Aligned_cols=236 Identities=18% Similarity=0.212 Sum_probs=163.8
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC-----C
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD-----R 93 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~-----~ 93 (270)
.+++.+.+.+ +|.+++|...|. +++|||+||++++.. .|..+.+.|+++|+|+++|+||||.|+.+... +
T Consensus 3 ~~~~~~~~~~-~~~~~~~~~~g~---g~~~vllHG~~~~~~-~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~ 77 (291)
T 3qyj_A 3 TNFEQTIVDT-TEARINLVKAGH---GAPLLLLHGYPQTHV-MWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINY 77 (291)
T ss_dssp TTCEEEEEEC-SSCEEEEEEECC---SSEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGG
T ss_pred CCcceeEEec-CCeEEEEEEcCC---CCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcccccc
Confidence 4677888888 799999998775 789999999999999 99999999988899999999999999876543 6
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh--hhHhhh------------
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV--SNAALE------------ 159 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~--~~~~~~------------ 159 (270)
+.+.+++|+.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.+...... ......
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
T 3qyj_A 78 SKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPD 157 (291)
T ss_dssp SHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCST
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCC
Confidence 888999999999999999999999999999999999999999999999998643210000 000000
Q ss_pred -------hccchhhh----hh----cccccHHHHHHHHHh-----------hhhcCCCC------hhhhhhhhheeeeEE
Q 024228 160 -------RIGYESWV----DF----LLPKTADALKVQFDI-----------ACYKLPTL------PAFVYKHILEKIHLL 207 (270)
Q Consensus 160 -------~~~~~~~~----~~----~~~~~~~~~~~~~~~-----------~~~~~~~~------~~~~~~~~~~P~l~i 207 (270)
........ .. ...........+... ..++.... ......++.+|+|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi 237 (291)
T 3qyj_A 158 NLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVL 237 (291)
T ss_dssp THHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEE
T ss_pred CchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCccccceEEE
Confidence 00000000 00 000000011110000 00000000 001133455999999
Q ss_pred EcCCCccCCH-HHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 208 WGENDKIFDM-QVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 208 ~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+|++|.+.+. .....+.+..+ +.+..+++ +||+++.|+|+++++.|.+||+.
T Consensus 238 ~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 238 WGEKGIIGRKYDVLATWRERAI-DVSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp EETTSSHHHHSCHHHHHHTTBS-SEEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred ecccccccchhhHHHHHHhhcC-Ccceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 9999976432 23334444444 77888886 89999999999999999999974
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-35 Score=221.12 Aligned_cols=238 Identities=18% Similarity=0.133 Sum_probs=176.1
Q ss_pred ccCCceeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCc--ccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC
Q 024228 17 KLVGMTQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFD--GILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 17 ~~~~~~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~--~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~ 92 (270)
...+++..++.. +|.+++|+..++. +++|+||++||++++ .. .|..+++.|.+. |.|+++|+||+|.|......
T Consensus 18 ~~~~~~~~~~~~-~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 95 (270)
T 3pfb_A 18 YFQGMATITLER-DGLQLVGTREEPFGEIYDMAIIFHGFTANRNTS-LLREIANSLRDENIASVRFDFNGHGDSDGKFEN 95 (270)
T ss_dssp SCCEEEEEEEEE-TTEEEEEEEEECSSSSEEEEEEECCTTCCTTCH-HHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGG
T ss_pred eeccceEEEecc-CCEEEEEEEEcCCCCCCCEEEEEcCCCCCcccc-HHHHHHHHHHhCCcEEEEEccccccCCCCCCCc
Confidence 344566777776 7999998776543 347899999999988 44 688999999888 99999999999999987777
Q ss_pred CChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch--hh
Q 024228 93 RTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE--SW 166 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~ 166 (270)
.+...+++|+.++++.+ +.++++|+|||+||.+++.+|.++|++|+++|+++|................... ..
T Consensus 96 ~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
T 3pfb_A 96 MTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHI 175 (270)
T ss_dssp CCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCTTSC
T ss_pred cCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCcccc
Confidence 88999999999999988 6679999999999999999999999999999999987653321111100000000 00
Q ss_pred hhhc---ccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcce
Q 024228 167 VDFL---LPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243 (270)
Q Consensus 167 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 243 (270)
.... .......+..... .......+..+.+|+++++|++|.++|.+.++.+.+.++ ++++++++++||.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 248 (270)
T 3pfb_A 176 PDRLPFKDLTLGGFYLRIAQ------QLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ-NSTLHLIEGADHCF 248 (270)
T ss_dssp CSEEEETTEEEEHHHHHHHH------HCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS-SEEEEEETTCCTTC
T ss_pred cccccccccccchhHhhccc------ccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC-CCeEEEcCCCCccc
Confidence 0000 0000011111111 011223345556999999999999999999999999987 89999999999999
Q ss_pred eecchHhHHHHHHHHHHhhh
Q 024228 244 NLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 244 ~~~~~~~~~~~i~~fl~~~~ 263 (270)
+.++++++.+.|.+||++..
T Consensus 249 ~~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 249 SDSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp CTHHHHHHHHHHHHHHC---
T ss_pred CccchHHHHHHHHHHHhhcC
Confidence 98999999999999998754
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-35 Score=220.64 Aligned_cols=225 Identities=22% Similarity=0.314 Sum_probs=163.6
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCC----CCCCChHHHHHHHHHHHHHh
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTD----RPDRTASFQAECMAKGLRKL 109 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~----~~~~~~~~~~~~~~~~l~~~ 109 (270)
++|...++ ++|+||++||++++.. .|..+++.|.++|+|+++|+||||.|+.. ....+.+++++|+.++++.+
T Consensus 11 l~~~~~g~--~~p~vv~~HG~~~~~~-~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (269)
T 4dnp_A 11 LNVRVVGS--GERVLVLAHGFGTDQS-AWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDAL 87 (269)
T ss_dssp TTCEEECS--CSSEEEEECCTTCCGG-GGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHT
T ss_pred hhhhhcCC--CCCEEEEEeCCCCcHH-HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhc
Confidence 34555554 4689999999999998 99999999988999999999999999762 23358999999999999999
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh----------hhHhhhhc--cchhh----hh-hccc
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV----------SNAALERI--GYESW----VD-FLLP 172 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~----------~~~~~~~~--~~~~~----~~-~~~~ 172 (270)
+.++++|+|||+||.+|+.+|.++|++|+++|++++........ ........ ..... .. ....
T Consensus 88 ~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (269)
T 4dnp_A 88 GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGA 167 (269)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCS
T ss_pred CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccC
Confidence 99999999999999999999999999999999999875432110 00000000 00000 00 0000
Q ss_pred ccHHHHHHHHHhhhh------------cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC
Q 024228 173 KTADALKVQFDIACY------------KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (270)
........+...... .........+.++.+|+++++|++|.++|++.++.+.+.++..+++++++++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 247 (269)
T 4dnp_A 168 DVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEG 247 (269)
T ss_dssp SCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEES
T ss_pred CChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCC
Confidence 111111111110000 00112233455666999999999999999999999999998338999999999
Q ss_pred cceeecchHhHHHHHHHHHHh
Q 024228 241 HLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~~ 261 (270)
|+++.++|+++.+.|.+||++
T Consensus 248 H~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 248 HLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp SCHHHHCHHHHHHHHHHHHC-
T ss_pred CCccccCHHHHHHHHHHHHhh
Confidence 999999999999999999975
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=223.11 Aligned_cols=226 Identities=19% Similarity=0.215 Sum_probs=166.1
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRK 108 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~ 108 (270)
++.+++|...++ ++|+||++||++++.. .|..+++.| .|+|+++|+||+|.|+... ..++.+++++|+.+++++
T Consensus 68 ~~~~~~~~~~g~--~~~~vv~~hG~~~~~~-~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 142 (330)
T 3p2m_A 68 QAGAISALRWGG--SAPRVIFLHGGGQNAH-TWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRE 142 (330)
T ss_dssp EETTEEEEEESS--SCCSEEEECCTTCCGG-GGHHHHHHS--CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHHHHHHH
T ss_pred cCceEEEEEeCC--CCCeEEEECCCCCccc-hHHHHHHHc--CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 455688887775 4689999999999999 999998888 7999999999999999543 558999999999999999
Q ss_pred hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc----------cch---hhh----hhcc
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI----------GYE---SWV----DFLL 171 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~----------~~~---~~~----~~~~ 171 (270)
++.++++|+|||+||.+++.+|.++|++|+++|++++................ ... ... ....
T Consensus 143 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (330)
T 3p2m_A 143 LAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAP 222 (330)
T ss_dssp SSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCT
T ss_pred hCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999976432111000000000 000 000 0000
Q ss_pred cccHHHHHHHHHhhhhcC--------------CCC---hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCce-E
Q 024228 172 PKTADALKVQFDIACYKL--------------PTL---PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNAT-M 233 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~ 233 (270)
......+...+....... ... ....+.++.+|+|+++|++|.++|++.++.+.+.++ +.+ +
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~-~~~~~ 301 (330)
T 3p2m_A 223 HRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRAT-HFRGV 301 (330)
T ss_dssp TSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCS-SEEEE
T ss_pred CCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeeE
Confidence 001111111111100000 000 012345566999999999999999999999999998 888 9
Q ss_pred EEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 234 ESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++++||+++.++|+++.+.|.+||++
T Consensus 302 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 302 HIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp EEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred EEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999964
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=239.40 Aligned_cols=242 Identities=19% Similarity=0.250 Sum_probs=180.5
Q ss_pred cCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC--CCC
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP--DRT 94 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~~ 94 (270)
...++..++++++|.+++|...++ +|+||++||++++.. .|..+++.|.++ |+|+++|+||||.|..+.. .++
T Consensus 234 ~~~~~~~~~~~~dg~~l~~~~~g~---~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~ 309 (555)
T 3i28_A 234 PSDMSHGYVTVKPRVRLHFVELGS---GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYC 309 (555)
T ss_dssp GGGSEEEEEEEETTEEEEEEEECS---SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGS
T ss_pred CcccceeEEEeCCCcEEEEEEcCC---CCEEEEEeCCCCchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCccccc
Confidence 345678899999999999998875 799999999999999 999999999987 9999999999999987653 478
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh--hhc-----------
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL--ERI----------- 161 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~--~~~----------- 161 (270)
.+++++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|+++++............ ...
T Consensus 310 ~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (555)
T 3i28_A 310 MEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQE 389 (555)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhC
Confidence 8999999999999999999999999999999999999999999999999887543221110000 000
Q ss_pred ----------cchh-hhhhcc------------------------------cccHHHHHHHHHhhhhcC-----CC----
Q 024228 162 ----------GYES-WVDFLL------------------------------PKTADALKVQFDIACYKL-----PT---- 191 (270)
Q Consensus 162 ----------~~~~-~~~~~~------------------------------~~~~~~~~~~~~~~~~~~-----~~---- 191 (270)
.... ...... .........+........ .+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (555)
T 3i28_A 390 PGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNM 469 (555)
T ss_dssp TTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCH
T ss_pred CCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHHHhc
Confidence 0000 000000 000000111110000000 00
Q ss_pred ------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 192 ------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 192 ------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.....+.++.+|+|+++|++|.++|++.++.+.+.++ +.++++++++||+++.++|+++.+.|.+||++...
T Consensus 470 ~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 547 (555)
T 3i28_A 470 ERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP-HLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDAR 547 (555)
T ss_dssp HHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT-TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHTC
T ss_pred cccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC-CceEEEeCCCCCCcchhCHHHHHHHHHHHHHhccC
Confidence 0011122445899999999999999999999998887 89999999999999999999999999999988754
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=201.82 Aligned_cols=196 Identities=24% Similarity=0.430 Sum_probs=167.8
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHH--HHHHhhcc-ceEEeecCCCCCCC---CCCCCCC-
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQF--QVLALAKT-YEVYVPDFLFFGSS---VTDRPDR- 93 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~-~~v~~~d~~g~G~s---~~~~~~~- 93 (270)
++..++.+ +|.+++++.....+++|+||++||++++.. .|.. +++.|++. |.|+++|+||+|.| .......
T Consensus 4 ~~~~~~~~-~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~ 81 (207)
T 3bdi_A 4 LQEEFIDV-NGTRVFQRKMVTDSNRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRG 81 (207)
T ss_dssp CEEEEEEE-TTEEEEEEEECCTTCCEEEEEECCTTCCGG-GGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTTC
T ss_pred ceeEEEee-CCcEEEEEEEeccCCCCeEEEECCCCCCcc-ccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCcc
Confidence 45666776 799998433333336899999999999998 9999 99999998 99999999999999 7666666
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
+.+++++++..+++.++.++++++|||+||.+++.++.++|++++++++++|......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------------- 139 (207)
T 3bdi_A 82 DLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESL---------------------- 139 (207)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGGG----------------------
T ss_pred hHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccch----------------------
Confidence 8999999999999999999999999999999999999999999999999998732110
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHH
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 253 (270)
.....++.+|+++++|++|..++.+..+.+.+.++ +.+++++++++|..+.++++++.+
T Consensus 140 --------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~ 198 (207)
T 3bdi_A 140 --------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIIS-GSRLEIVEGSGHPVYIEKPEEFVR 198 (207)
T ss_dssp --------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHST-TCEEEEETTCCSCHHHHSHHHHHH
T ss_pred --------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcC-CceEEEeCCCCCCccccCHHHHHH
Confidence 11122333899999999999999999999999987 899999999999999999999999
Q ss_pred HHHHHHHh
Q 024228 254 QLKTILAS 261 (270)
Q Consensus 254 ~i~~fl~~ 261 (270)
.|.+||++
T Consensus 199 ~i~~fl~~ 206 (207)
T 3bdi_A 199 ITVDFLRN 206 (207)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 99999975
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=231.90 Aligned_cols=232 Identities=20% Similarity=0.195 Sum_probs=170.9
Q ss_pred ecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024228 28 IEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l 106 (270)
..+|..++|...++ +|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+....+.+++++|+.+++
T Consensus 10 ~~dG~~l~y~~~G~---gp~VV~lHG~~~~~~-~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~dl~~~l 85 (456)
T 3vdx_A 10 NSTSIDLYYEDHGT---GVPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVL 85 (456)
T ss_dssp TTEEEEEEEEEESS---SEEEEEECCTTCCGG-GGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred ccCCeEEEEEEeCC---CCEEEEECCCCCcHH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 34799999988874 799999999999999 999999999665 9999999999999998877889999999999999
Q ss_pred HHhCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCchhh--------hHhhhh----cc------chh-h
Q 024228 107 RKLGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVS--------NAALER----IG------YES-W 166 (270)
Q Consensus 107 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~~~--------~~~~~~----~~------~~~-~ 166 (270)
+.++.++++++|||+||.+++.+|+++ |++|+++|++++......... ...... .. ... .
T Consensus 86 ~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (456)
T 3vdx_A 86 ETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFF 165 (456)
T ss_dssp HHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccchHHHHHHH
Confidence 999999999999999999999988887 899999999998764321100 000000 00 000 0
Q ss_pred hhhcc-------cccHHHHHHHHHhhhhcC-----------CCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHh
Q 024228 167 VDFLL-------PKTADALKVQFDIACYKL-----------PTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQV 227 (270)
Q Consensus 167 ~~~~~-------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~ 227 (270)
..... .................. .......+..+.+|+|+++|++|.++|.+ ..+.+.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~ 245 (456)
T 3vdx_A 166 NDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL 245 (456)
T ss_dssp HHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHC
T ss_pred HHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHC
Confidence 00000 000111111111000000 01112234455699999999999999988 677777777
Q ss_pred cCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 228 GQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 228 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
+ ++++++++++||+++.++|+++.+.|.+||++...
T Consensus 246 ~-~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 246 P-SAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp T-TSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHHHH
T ss_pred C-CceEEEeCCCCCcchhhCHHHHHHHHHHHHHHhhc
Confidence 6 89999999999999999999999999999987653
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=225.28 Aligned_cols=238 Identities=24% Similarity=0.232 Sum_probs=171.0
Q ss_pred eeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC--CCChHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP--DRTASF 97 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~~~~~ 97 (270)
+...+.+ +|.+++|+..++. .++|+||++||++++.. .|..+++.|.+. |+|+++|+||+|.|..+.. .++.+.
T Consensus 4 ~~~~~~~-~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~ 81 (356)
T 2e3j_A 4 VHRILNC-RGTRIHAVADSPPDQQGPLVVLLHGFPESWY-SWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKE 81 (356)
T ss_dssp CEEEEEE-TTEEEEEEEECCTTCCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHH
T ss_pred eEEEEcc-CCeEEEEEEecCCCCCCCEEEEECCCCCcHH-HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHH
Confidence 3455665 7999999988753 25789999999999998 999999999876 9999999999999987653 468899
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccC----------CCCc--hhhhHhhhh-----
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM----------GLTE--SVSNAALER----- 160 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~----------~~~~--~~~~~~~~~----- 160 (270)
+++|+.++++.++.++++++|||+||.+++.+|.++|++|+++|++++.. .... .........
T Consensus 82 ~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (356)
T 2e3j_A 82 LVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGR 161 (356)
T ss_dssp HHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHSSSCSSE
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999999999998765 1100 000000000
Q ss_pred ---------cc---------chhhhh-hc---------------------------------------------------
Q 024228 161 ---------IG---------YESWVD-FL--------------------------------------------------- 170 (270)
Q Consensus 161 ---------~~---------~~~~~~-~~--------------------------------------------------- 170 (270)
.. ...... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (356)
T 2e3j_A 162 VWYQDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYP 241 (356)
T ss_dssp EEHHHHHHHCSHHHHHHHTTHHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCGGGGCCCC
T ss_pred HHHHHHHhcccchHHHHHHhHHHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhhhhccccc
Confidence 00 000000 00
Q ss_pred --ccc--cHHHHHHHHHhhh----------hcC---CC--ChhhhhhhhheeeeEEEcCCCccCCH--HHHHHHHHHhcC
Q 024228 171 --LPK--TADALKVQFDIAC----------YKL---PT--LPAFVYKHILEKIHLLWGENDKIFDM--QVARNLKEQVGQ 229 (270)
Q Consensus 171 --~~~--~~~~~~~~~~~~~----------~~~---~~--~~~~~~~~~~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~ 229 (270)
.+. .......+..... +.. .+ .....+..+.+|+|+++|++|.++|. +.++.+.+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~~~~~~~l~~~~p- 320 (356)
T 2e3j_A 242 ETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVMP- 320 (356)
T ss_dssp SSCCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHTHHHHHTHHHHCT-
T ss_pred ccccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCccccccHHHHHHHHHhCc-
Confidence 000 0000000000000 000 00 00001234569999999999999984 88899999888
Q ss_pred Cc-eEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 230 NA-TMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 230 ~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+. ++++++++||+++.|+|+++++.|.+||+++
T Consensus 321 ~~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 321 NYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp TEEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred CcceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 88 9999999999999999999999999999865
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=214.28 Aligned_cols=219 Identities=13% Similarity=0.125 Sum_probs=164.0
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH----
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL---- 106 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l---- 106 (270)
|.+++|...++.+++|+||++||++++.. .|. ++..|.++|+|+++|+||+|.|+ ....++.+++++|+.+++
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~-~~~-~~~~l~~g~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~ 78 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLK-IFG-ELEKYLEDYNCILLDLKGHGESK-GQCPSTVYGYIDNVANFITNSE 78 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGG-GGT-TGGGGCTTSEEEEECCTTSTTCC-SCCCSSHHHHHHHHHHHHHHCT
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHH-HHH-HHHHHHhCCEEEEecCCCCCCCC-CCCCcCHHHHHHHHHHHHHhhh
Confidence 56778877777567899999999999999 898 88888877999999999999998 445679999999999999
Q ss_pred --HHhCCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCchh---hhHhhhhccchhhhhhcc---------
Q 024228 107 --RKLGVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTESV---SNAALERIGYESWVDFLL--------- 171 (270)
Q Consensus 107 --~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--------- 171 (270)
+.++ +++++|||+||.+++.+|.+ +|+ |+++|++++........ ..................
T Consensus 79 ~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (245)
T 3e0x_A 79 VTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSE 155 (245)
T ss_dssp TTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHH
T ss_pred hHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHH
Confidence 8887 99999999999999999999 999 99999999987652111 111111000000000000
Q ss_pred ------cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee
Q 024228 172 ------PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 245 (270)
Q Consensus 172 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 245 (270)
..........+.... .......+.++.+|+++++|++|.++|.+..+.+.+.++ ++++++++++||.++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 231 (245)
T 3e0x_A 156 KYFETLEKDPDIMINDLIACK---LIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE-NSELKIFETGKHFLLV 231 (245)
T ss_dssp HHHTTSCSSHHHHHHHHHHHH---HCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS-SEEEEEESSCGGGHHH
T ss_pred HHHHHHhcCcHHHHHHHHHhc---cccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC-CceEEEeCCCCcceEE
Confidence 001111111111110 111223345566999999999999999999999999998 8999999999999999
Q ss_pred cchHhHHHHHHHHH
Q 024228 246 ERPFVYNRQLKTIL 259 (270)
Q Consensus 246 ~~~~~~~~~i~~fl 259 (270)
++|+++.+.|.+||
T Consensus 232 ~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 232 VNAKGVAEEIKNFI 245 (245)
T ss_dssp HTHHHHHHHHHTTC
T ss_pred ecHHHHHHHHHhhC
Confidence 99999999998885
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=216.07 Aligned_cols=237 Identities=15% Similarity=0.111 Sum_probs=162.1
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhc-cceEEeecCCCCCCCCCCC--CCCChH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK-TYEVYVPDFLFFGSSVTDR--PDRTAS 96 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~~ 96 (270)
..+..++.+.+|.+++|...++ +++++|||+||++++.. .+ .+...+.. +|+|+++|+||||.|+... ..++.+
T Consensus 13 ~~~~~~~~~~~g~~l~~~~~g~-~~g~~vvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 89 (317)
T 1wm1_A 13 AYDSGWLDTGDGHRIYWELSGN-PNGKPAVFIHGGPGGGI-SP-HHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTW 89 (317)
T ss_dssp CSEEEEEECSSSCEEEEEEEEC-TTSEEEEEECCTTTCCC-CG-GGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHH
T ss_pred cceeeEEEcCCCcEEEEEEcCC-CCCCcEEEECCCCCccc-ch-hhhhhccccCCeEEEECCCCCCCCCCCcccccccHH
Confidence 4567788888899999987765 34678999999877543 22 22334433 4999999999999998643 247889
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh---------------hHhhhhc
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS---------------NAALERI 161 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---------------~~~~~~~ 161 (270)
.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... .......
T Consensus 90 ~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (317)
T 1wm1_A 90 HLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSIL 169 (317)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999987543211000 0000000
Q ss_pred cc-------hhhhhhcccccHH-------------------------------HHHHHHH--------hhhhcCCCC-hh
Q 024228 162 GY-------ESWVDFLLPKTAD-------------------------------ALKVQFD--------IACYKLPTL-PA 194 (270)
Q Consensus 162 ~~-------~~~~~~~~~~~~~-------------------------------~~~~~~~--------~~~~~~~~~-~~ 194 (270)
.. ............. ....... ...+..... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (317)
T 1wm1_A 170 SDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLL 249 (317)
T ss_dssp CTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHH
T ss_pred cchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccchhhH
Confidence 00 0000000000000 0000000 000000011 12
Q ss_pred hhhhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec-chHhHHHHHHHHHH
Q 024228 195 FVYKHIL-EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE-RPFVYNRQLKTILA 260 (270)
Q Consensus 195 ~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 260 (270)
..+.++. +|+|+++|++|.++|++.++.+.+.++ ++++++++++||+++.+ .++++.+.|.+|++
T Consensus 250 ~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p-~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 250 RNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP-EAELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp HTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT-TSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred hhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCC-CceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 2344554 999999999999999999999999998 89999999999998664 57888899998875
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=217.36 Aligned_cols=216 Identities=16% Similarity=0.225 Sum_probs=161.5
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC---C-CChHHHHHHHHHHHHHhCCCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP---D-RTASFQAECMAKGLRKLGVEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~---~-~~~~~~~~~~~~~l~~~~~~~~~l~G~ 119 (270)
++|+||++||++++.. .|..+++.|+++|+|+++|+||||.|..... . .+.+++++|+.+++++++.++++|+||
T Consensus 27 ~~~~vv~lHG~~~~~~-~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~ 105 (282)
T 3qvm_A 27 GEKTVLLAHGFGCDQN-MWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGH 105 (282)
T ss_dssp SSCEEEEECCTTCCGG-GGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCeEEEECCCCCCcc-hHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 3489999999999999 9999999999899999999999999987652 2 488999999999999999999999999
Q ss_pred chhHHHHHHHHhhCccccccEEEecccCCCCchh-----------hhHhhhhcc--chhh----h-hhcc-ccc------
Q 024228 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-----------SNAALERIG--YESW----V-DFLL-PKT------ 174 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-----------~~~~~~~~~--~~~~----~-~~~~-~~~------ 174 (270)
|+||.+++.+|.++|++|+++|++++........ ......... .... . .... ...
T Consensus 106 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (282)
T 3qvm_A 106 SVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGE 185 (282)
T ss_dssp THHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred cccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccchhhHHH
Confidence 9999999999999999999999999876433211 000000000 0000 0 0000 000
Q ss_pred ---------HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee
Q 024228 175 ---------ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 245 (270)
Q Consensus 175 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 245 (270)
........... . .......+.++.+|+++++|++|.++|.+.++.+.+.++ +.++++++++||+++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 261 (282)
T 3qvm_A 186 LSGSFCTTDPIVAKTFAKAT-F--FSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP-NSQLELIQAEGHCLHM 261 (282)
T ss_dssp HHHHHHHSCHHHHHHHHHHH-H--SCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSS-SEEEEEEEEESSCHHH
T ss_pred HHHHHhcCCcHHHHHHHHHH-h--cccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCC-CCcEEEecCCCCcccc
Confidence 00001111100 0 111223455566999999999999999999999999997 8999999999999999
Q ss_pred cchHhHHHHHHHHHHhhhh
Q 024228 246 ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 246 ~~~~~~~~~i~~fl~~~~~ 264 (270)
++|+++.+.|.+||++...
T Consensus 262 ~~~~~~~~~i~~fl~~~~~ 280 (282)
T 3qvm_A 262 TDAGLITPLLIHFIQNNQT 280 (282)
T ss_dssp HCHHHHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhcCC
Confidence 9999999999999987643
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=213.35 Aligned_cols=236 Identities=16% Similarity=0.099 Sum_probs=156.7
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhc-cceEEeecCCCCCCCCCCC--CCCCh
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK-TYEVYVPDFLFFGSSVTDR--PDRTA 95 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~ 95 (270)
..++..++++.+|.+++|...++ +++++|||+||++++.. .+ .+...+.. +|+|+++|+||||.|+... ..++.
T Consensus 9 ~~~~~~~~~~~~g~~l~y~~~G~-~~g~pvvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 85 (313)
T 1azw_A 9 TPYQQGSLKVDDRHTLYFEQCGN-PHGKPVVMLHGGPGGGC-ND-KMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTT 85 (313)
T ss_dssp CCSEEEEEECSSSCEEEEEEEEC-TTSEEEEEECSTTTTCC-CG-GGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCH
T ss_pred CccccceEEcCCCCEEEEEecCC-CCCCeEEEECCCCCccc-cH-HHHHhcCcCcceEEEECCCCCcCCCCCcccccccH
Confidence 45677888888899999987765 34678999999877543 22 23344443 4999999999999998653 34788
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-----------h----Hhhhh
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-----------N----AALER 160 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-----------~----~~~~~ 160 (270)
+.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... . .....
T Consensus 86 ~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (313)
T 1azw_A 86 WDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNA 165 (313)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhhchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999987543211000 0 00000
Q ss_pred ccc-------hhhhhhcccccHH--------------------------------HHHHHHH-h-------hhhcC-CCC
Q 024228 161 IGY-------ESWVDFLLPKTAD--------------------------------ALKVQFD-I-------ACYKL-PTL 192 (270)
Q Consensus 161 ~~~-------~~~~~~~~~~~~~--------------------------------~~~~~~~-~-------~~~~~-~~~ 192 (270)
... ............. ....... . ..... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
T 1azw_A 166 IPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQ 245 (313)
T ss_dssp SCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTH
T ss_pred cCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhcccccccccch
Confidence 000 0000000000000 0000000 0 00000 000
Q ss_pred hhhhhhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec-chHhHHHHHHHH
Q 024228 193 PAFVYKHIL-EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE-RPFVYNRQLKTI 258 (270)
Q Consensus 193 ~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~f 258 (270)
....+.++. +|+|+|+|++|.++|++.++.+.+.++ ++++++++++||+++.+ .++++.+.|.+|
T Consensus 246 ~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 246 LLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWP-KAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCT-TSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhCC-CcEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 122334454 999999999999999999999999998 89999999999987432 244455555554
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=221.80 Aligned_cols=241 Identities=15% Similarity=0.168 Sum_probs=166.5
Q ss_pred ceeEEEeecCCe----EEEEEecCCC--CCCceEEEeCCCCCccccc-------------HHHHH---HHhhcc-ceEEe
Q 024228 21 MTQRTIEIEPGT----ILNIWVPKKT--TKKHAVVLLHPFGFDGILT-------------WQFQV---LALAKT-YEVYV 77 (270)
Q Consensus 21 ~~~~~i~~~~g~----~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~-------------~~~~~---~~l~~~-~~v~~ 77 (270)
.+...+.+++|. +|+|...+.. .++|+||++||++++.. . |..++ +.|.+. |+|++
T Consensus 12 ~~~~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~ 90 (377)
T 3i1i_A 12 FILKEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSH-AAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVIC 90 (377)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSC-CSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEE
T ss_pred EeecceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcch-hccccccccccccchhhhcCCCCccccccEEEEE
Confidence 455667776654 4578777653 34689999999999977 6 77777 566555 99999
Q ss_pred ecCCCCCCCC-------CCC--------------CCCChHHHHHHHHHHHHHhCCCceE-EEEEchhHHHHHHHHhhCcc
Q 024228 78 PDFLFFGSSV-------TDR--------------PDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPD 135 (270)
Q Consensus 78 ~d~~g~G~s~-------~~~--------------~~~~~~~~~~~~~~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~ 135 (270)
+|+||||.|. .+. ..++.+++++|+.+++++++.++++ |+||||||.+|+.+|.++|+
T Consensus 91 ~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~ 170 (377)
T 3i1i_A 91 TDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPH 170 (377)
T ss_dssp ECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTT
T ss_pred ecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChH
Confidence 9999998743 111 1458899999999999999999986 99999999999999999999
Q ss_pred ccccEEE-ecccCCCCchhhh-------Hhhhhc----------------------------cchhhhhhccc----cc-
Q 024228 136 LVESMVV-TCSVMGLTESVSN-------AALERI----------------------------GYESWVDFLLP----KT- 174 (270)
Q Consensus 136 ~v~~~i~-~~~~~~~~~~~~~-------~~~~~~----------------------------~~~~~~~~~~~----~~- 174 (270)
+|+++|+ +++.......... ...... ........+.. ..
T Consensus 171 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T 3i1i_A 171 MVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEP 250 (377)
T ss_dssp TBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGG
T ss_pred HHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccc
Confidence 9999999 6665441110000 000000 00000000000 00
Q ss_pred ------HHHHHHHHHhhh---h------------------cC---CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHH
Q 024228 175 ------ADALKVQFDIAC---Y------------------KL---PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLK 224 (270)
Q Consensus 175 ------~~~~~~~~~~~~---~------------------~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 224 (270)
......+..... . .. .......+.++.+|+|+|+|++|.++|++.++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~ 330 (377)
T 3i1i_A 251 YEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMV 330 (377)
T ss_dssp GTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHH
T ss_pred cccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHH
Confidence 000011100000 0 00 01113345566699999999999999999999999
Q ss_pred HHh----cCCceEEEecC-CCcceeecchHhHHHHHHHHHHhhh
Q 024228 225 EQV----GQNATMESIEK-AGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 225 ~~~----~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
+.+ + +++++++++ +||+++.++|+++++.|.+||++..
T Consensus 331 ~~~~~~g~-~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 331 DLLQKQGK-YAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp HHHHHTTC-CEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred HHHHhcCC-CceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence 998 7 899999998 9999999999999999999998754
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=209.29 Aligned_cols=209 Identities=20% Similarity=0.259 Sum_probs=142.2
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhh-ccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc--eEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK--CTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~l~G~S~ 121 (270)
+|+|||+||++++.. .|..+++.|+ ++|+|+++|+||||.|+... ..+++++++|+.+++++++.++ ++|+||||
T Consensus 16 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~-~~~~~~~a~~l~~~l~~l~~~~~p~~lvGhSm 93 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERH-CDNFAEAVEMIEQTVQAHVTSEVPVILVGYSL 93 (264)
T ss_dssp BCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC--------CHHHHHHHHHHHTTCCTTSEEEEEEETH
T ss_pred CCcEEEEcCCCCCHH-HHHHHHHHhcccCceEEEecCCCCCCCCCCC-ccCHHHHHHHHHHHHHHhCcCCCceEEEEECH
Confidence 489999999999999 9999999998 55999999999999998643 3678899999999999998776 99999999
Q ss_pred hHHHHHH---HHhhCccccccEEEecccCCCCchhhhH--------hhhhc---cchhhh-hh-----cccccHHHHHH-
Q 024228 122 GGMVGFK---MAEMYPDLVESMVVTCSVMGLTESVSNA--------ALERI---GYESWV-DF-----LLPKTADALKV- 180 (270)
Q Consensus 122 Gg~~a~~---~a~~~p~~v~~~i~~~~~~~~~~~~~~~--------~~~~~---~~~~~~-~~-----~~~~~~~~~~~- 180 (270)
||.+++. +|.++|++|+++|++++........... ..... ...... .. +..........
T Consensus 94 GG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1r3d_A 94 GGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTL 173 (264)
T ss_dssp HHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCHHHHHHH
T ss_pred hHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhccCHHHHHHH
Confidence 9999999 8889999999999998754432211000 00000 000000 00 00000000000
Q ss_pred --------------HHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 181 --------------QFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 181 --------------~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
.+..............+.++.+|+++++|++|..++ .+.+.+. .++++++++||++++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~~--~~~~~i~~~gH~~~~e 246 (264)
T 1r3d_A 174 IAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESSG--LSYSQVAQAGHNVHHE 246 (264)
T ss_dssp HHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHHC--SEEEEETTCCSCHHHH
T ss_pred HHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHhC--CcEEEcCCCCCchhhc
Confidence 000000000112233455666999999999998642 2334442 6799999999999999
Q ss_pred chHhHHHHHHHHHHhh
Q 024228 247 RPFVYNRQLKTILASL 262 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~~ 262 (270)
+|+++++.|.+|++++
T Consensus 247 ~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 247 QPQAFAKIVQAMIHSI 262 (264)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999875
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=208.45 Aligned_cols=236 Identities=17% Similarity=0.120 Sum_probs=168.5
Q ss_pred ceeEEEee---cCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHH--HHHHHhhcc-ceEEeecCCCCCCCCCCCCCC
Q 024228 21 MTQRTIEI---EPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQ--FQVLALAKT-YEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 21 ~~~~~i~~---~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~ 93 (270)
.+.+.+++ .+|.+++|+...+ .+++|+||++||++++.. .|. .+.+.|.+. |.|+++|+||+|.|.......
T Consensus 9 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 87 (270)
T 3llc_A 9 IETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMT-GTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDG 87 (270)
T ss_dssp EEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTT-SHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGC
T ss_pred CCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccc-cchHHHHHHHHHhCCCcEEEeccccCCCCCCccccc
Confidence 44555555 5899999985444 244899999999999876 543 467777665 999999999999998877778
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhh---Cc---cccccEEEecccCCCCchhhhHhhh-----hc-
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM---YP---DLVESMVVTCSVMGLTESVSNAALE-----RI- 161 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~---~p---~~v~~~i~~~~~~~~~~~~~~~~~~-----~~- 161 (270)
+.+++++|+.++++.++.++++++|||+||.+++.+|.+ +| ++|+++|++++.............. ..
T Consensus 88 ~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (270)
T 3llc_A 88 TISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELA 167 (270)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999 99 8999999999876533211100000 00
Q ss_pred --cchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC--ceEEEec
Q 024228 162 --GYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN--ATMESIE 237 (270)
Q Consensus 162 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~ 237 (270)
........+................... ....+..+.+|+++++|++|.++|.+.++.+.+.++ + .++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~-~~~~~~~~~~ 243 (270)
T 3llc_A 168 ENGYFEEVSEYSPEPNIFTRALMEDGRANR---VMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLP-ADDVVLTLVR 243 (270)
T ss_dssp HHSEEEECCTTCSSCEEEEHHHHHHHHHTC---CTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSC-SSSEEEEEET
T ss_pred ccCcccChhhcccchhHHHHHHHhhhhhhh---hhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcC-CCCeeEEEeC
Confidence 0000000000000000111111111000 011233445899999999999999999999999987 5 8999999
Q ss_pred CCCcceee-cchHhHHHHHHHHHHh
Q 024228 238 KAGHLVNL-ERPFVYNRQLKTILAS 261 (270)
Q Consensus 238 ~~gH~~~~-~~~~~~~~~i~~fl~~ 261 (270)
++||.+.. +.++++.+.|.+||++
T Consensus 244 ~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 244 DGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp TCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred CCcccccccccHHHHHHHHHHHhcC
Confidence 99997654 6788999999999975
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-32 Score=208.86 Aligned_cols=239 Identities=16% Similarity=0.096 Sum_probs=169.8
Q ss_pred EEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAEC 101 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~ 101 (270)
.+...+|.+++|+..++. .++|+||++||++++.. .|..+++.|.+. |+|+++|+||||.|...... .+.+.+++|
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 99 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRD 99 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHHHHH
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 666779999998776553 45688999999999999 999999999986 99999999999999865533 678888999
Q ss_pred HHHHHHHhC----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc-----------cchhh
Q 024228 102 MAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-----------GYESW 166 (270)
Q Consensus 102 ~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 166 (270)
+.++++.+. .++++++|||+||.+++.+|.++|++|+++|++++................ .....
T Consensus 100 ~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (303)
T 3pe6_A 100 VLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPI 179 (303)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred HHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHHhcccccCCcc
Confidence 999988864 348999999999999999999999999999999988765432211111000 00000
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCC--------------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-Cc
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPT--------------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NA 231 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~ 231 (270)
......................... .....+.++.+|+++++|++|.+++.+.++.+.+.++. +.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 259 (303)
T 3pe6_A 180 DSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDK 259 (303)
T ss_dssp CGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSE
T ss_pred chhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHHHHHhcccCCc
Confidence 0000011111111111000000000 01123445569999999999999999999999999863 68
Q ss_pred eEEEecCCCcceeecchHhHHH---HHHHHHHhhhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNR---QLKTILASLVH 264 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~---~i~~fl~~~~~ 264 (270)
++++++++||.++.++|+.+.+ .+.+||++...
T Consensus 260 ~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~ 295 (303)
T 3pe6_A 260 TLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTA 295 (303)
T ss_dssp EEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeCCCccceeccchHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999875544 46677766543
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=210.52 Aligned_cols=239 Identities=17% Similarity=0.119 Sum_probs=170.2
Q ss_pred EEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAEC 101 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~ 101 (270)
.+...+|.+++|+..++. .++|+||++||++++.. .|..+++.|.+. |.|+++|+||+|.|.... ...+.+.+++|
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d 117 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRD 117 (342)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-GGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHHHHH
T ss_pred eEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHHHHH
Confidence 667779999998776543 45788999999999999 999999999996 999999999999998755 34788888999
Q ss_pred HHHHHHHhCC----CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh---h--------hccchhh
Q 024228 102 MAKGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL---E--------RIGYESW 166 (270)
Q Consensus 102 ~~~~l~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~---~--------~~~~~~~ 166 (270)
+.++++.+.. ++++|+|||+||.+++.+|.++|++|+++|++++............. . .......
T Consensus 118 ~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (342)
T 3hju_A 118 VLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPI 197 (342)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHHHHCTTCBCCCC
T ss_pred HHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHHHhccccccCcc
Confidence 9999988643 48999999999999999999999999999999988654332211100 0 0000000
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCC--------------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-Cc
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPT--------------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NA 231 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~ 231 (270)
......................... .....+.++.+|+|+++|++|.+++.+.++.+.+.++. ++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~ 277 (342)
T 3hju_A 198 DSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDK 277 (342)
T ss_dssp CGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSE
T ss_pred cccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHHHHHHHcCCCCc
Confidence 0000111111111111000000000 01123445569999999999999999999999999873 68
Q ss_pred eEEEecCCCcceeecchHhHH---HHHHHHHHhhhh
Q 024228 232 TMESIEKAGHLVNLERPFVYN---RQLKTILASLVH 264 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~---~~i~~fl~~~~~ 264 (270)
++++++++||+++.++|+++. +.+.+||++...
T Consensus 278 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (342)
T 3hju_A 278 TLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTA 313 (342)
T ss_dssp EEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccC
Confidence 999999999999999887554 446777776543
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-34 Score=217.84 Aligned_cols=235 Identities=6% Similarity=-0.051 Sum_probs=164.2
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCC--CCcccccHHHHHHHhhccceEEeecCCCCCCCC-CCCCCCCh
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPF--GFDGILTWQFQVLALAKTYEVYVPDFLFFGSSV-TDRPDRTA 95 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~-~~~~~~~~ 95 (270)
..++...+.++ +..++|+..+ ++|+|||+||+ +++.. .|..+++.|+++|+|+++|+||||.|+ .....++.
T Consensus 19 ~~~~~~~v~~~-~~~~~~~~~~---~~p~vv~lHG~G~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~ 93 (292)
T 3l80_A 19 AALNKEMVNTL-LGPIYTCHRE---GNPCFVFLSGAGFFSTAD-NFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGL 93 (292)
T ss_dssp -CCEEEEECCT-TSCEEEEEEC---CSSEEEEECCSSSCCHHH-HTHHHHTTSCTTSEEEEECCTTSTTSCCCCCTTCCH
T ss_pred hccCcceEEec-CceEEEecCC---CCCEEEEEcCCCCCcHHH-HHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcccccH
Confidence 45677888885 5567776433 36899999954 56677 999999999877999999999999999 55556899
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc---------hhhhHhhhhccc---
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE---------SVSNAALERIGY--- 163 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~---------~~~~~~~~~~~~--- 163 (270)
+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|+++|...... ............
T Consensus 94 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (292)
T 3l80_A 94 RDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAAD 173 (292)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHH
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999995432100 000000000000
Q ss_pred -----h-hhhhhcccccHHH-------HHHHHHhhhh---cC--CCCh----hhhhhhhheeeeEEEcCCCccCCHHHHH
Q 024228 164 -----E-SWVDFLLPKTADA-------LKVQFDIACY---KL--PTLP----AFVYKHILEKIHLLWGENDKIFDMQVAR 221 (270)
Q Consensus 164 -----~-~~~~~~~~~~~~~-------~~~~~~~~~~---~~--~~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 221 (270)
. .....+....... ....+..... .. .... ...+.. .+|+++++|++|..++++ +
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~- 250 (292)
T 3l80_A 174 RLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S- 250 (292)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-
T ss_pred hhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-
Confidence 0 0000011110000 0011100000 00 0000 012233 599999999999999888 6
Q ss_pred HHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 222 NLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.+.+.++ +.+ ++++++||+++.++|+++++.|.+||++.+
T Consensus 251 ~~~~~~~-~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 251 EYLNKHT-QTK-LILCGQHHYLHWSETNSILEKVEQLLSNHE 290 (292)
T ss_dssp TTCCCCT-TCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTCT
T ss_pred HHhccCC-Cce-eeeCCCCCcchhhCHHHHHHHHHHHHHhcc
Confidence 7776666 778 999999999999999999999999998653
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-32 Score=209.11 Aligned_cols=235 Identities=15% Similarity=0.226 Sum_probs=156.7
Q ss_pred eeEEEeecCC---eEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCC-CCCCh
Q 024228 22 TQRTIEIEPG---TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDR-PDRTA 95 (270)
Q Consensus 22 ~~~~i~~~~g---~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~-~~~~~ 95 (270)
+...+.+.++ ..++|+..+. ++|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+... ..+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~g~--~~p~lvllHG~~~~~~-~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~ 90 (316)
T 3c5v_A 14 SMEDVEVENETGKDTFRVYKSGS--EGPVLLLLHGGGHSAL-SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSA 90 (316)
T ss_dssp EEEEEEEEETTEEEEEEEEEECS--SSCEEEEECCTTCCGG-GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCH
T ss_pred ccceEEecCCcceEEEEEEecCC--CCcEEEEECCCCcccc-cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCH
Confidence 3456666533 5788887763 4689999999999988 99999999998 7999999999999998654 35899
Q ss_pred HHHHHHHHHHHHHh--CC-CceEEEEEchhHHHHHHHHhh--CccccccEEEecccCCCCchhhh---Hhhhh--ccch-
Q 024228 96 SFQAECMAKGLRKL--GV-EKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMGLTESVSN---AALER--IGYE- 164 (270)
Q Consensus 96 ~~~~~~~~~~l~~~--~~-~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~~~~~~~~---~~~~~--~~~~- 164 (270)
+.+++|+.++++++ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++.......... ..... ....
T Consensus 91 ~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (316)
T 3c5v_A 91 ETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKS 169 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSS
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCcccccc
Confidence 99999999999999 65 689999999999999999996 576 9999999864211000000 00000 0000
Q ss_pred --hhhhhc----ccccHHHHHHHHHhh-------------------hhcCCCC------------hhhhhhhhheeeeEE
Q 024228 165 --SWVDFL----LPKTADALKVQFDIA-------------------CYKLPTL------------PAFVYKHILEKIHLL 207 (270)
Q Consensus 165 --~~~~~~----~~~~~~~~~~~~~~~-------------------~~~~~~~------------~~~~~~~~~~P~l~i 207 (270)
...... ............... ....... ....+..+.+|+|+|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lli 249 (316)
T 3c5v_A 170 LENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLL 249 (316)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHHHHHHSSSCEEEE
T ss_pred HHHHHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHHHhhcCCCCEEEE
Confidence 000000 000000000000000 0000000 001122456999999
Q ss_pred EcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 208 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 208 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
+|++|.+.+.... ....+ +.++++++++||+++.|+|+++++.|.+||.+...
T Consensus 250 ~g~~D~~~~~~~~---~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 302 (316)
T 3c5v_A 250 LAGVDRLDKDLTI---GQMQG-KFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRF 302 (316)
T ss_dssp ESSCCCCCHHHHH---HHHTT-CSEEEECCCCSSCHHHHSHHHHHHHHHHHHHHTTS
T ss_pred EecccccccHHHH---HhhCC-ceeEEEcCCCCCcccccCHHHHHHHHHHHHHhccc
Confidence 9999987543222 22233 78999999999999999999999999999986543
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-34 Score=216.00 Aligned_cols=235 Identities=15% Similarity=0.126 Sum_probs=170.6
Q ss_pred cccCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCC
Q 024228 16 LKLVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT 94 (270)
Q Consensus 16 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~ 94 (270)
.+...|+...+.. +|..++|.. + ++|+||++||++++.. .|..+++.|.+. |.|+++|+||+|.|.......+
T Consensus 16 ~~~~~m~~~~~~~-~g~~~~~~~-g---~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 89 (270)
T 3rm3_A 16 PRGSHMSEQYPVL-SGAEPFYAE-N---GPVGVLLVHGFTGTPH-SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTT 89 (270)
T ss_dssp -----CCCSSCCC-TTCCCEEEC-C---SSEEEEEECCTTCCGG-GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCC
T ss_pred ccccccCCCccCC-CCCcccccC-C---CCeEEEEECCCCCChh-HHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCC
Confidence 3444566656555 688887763 2 4799999999999999 999999999987 9999999999999986555678
Q ss_pred hHHHHHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh--------hhccc-
Q 024228 95 ASFQAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL--------ERIGY- 163 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~--------~~~~~- 163 (270)
.+.+++|+.++++.+. .++++++|||+||.+++.+|.++|+ |+++|+++++............ .....
T Consensus 90 ~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (270)
T 3rm3_A 90 FHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSD 168 (270)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCcc
Confidence 9999999999999997 7899999999999999999999999 9999999987654322110000 00000
Q ss_pred ---hhhh-hhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEEEecC
Q 024228 164 ---ESWV-DFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEK 238 (270)
Q Consensus 164 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (270)
.... ................... .....+..+.+|+|+++|++|.++|++.++.+.+.++. +++++++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (270)
T 3rm3_A 169 LKNPDVKELAYEKTPTASLLQLARLMA-----QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRN 243 (270)
T ss_dssp CSCTTCCCCCCSEEEHHHHHHHHHHHH-----HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESS
T ss_pred ccccchHhhcccccChhHHHHHHHHHH-----HHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCC
Confidence 0000 0000111111111111110 01122445559999999999999999999999999872 349999999
Q ss_pred CCcceeecch-HhHHHHHHHHHHhh
Q 024228 239 AGHLVNLERP-FVYNRQLKTILASL 262 (270)
Q Consensus 239 ~gH~~~~~~~-~~~~~~i~~fl~~~ 262 (270)
+||.++.+.+ +++.+.|.+||++.
T Consensus 244 ~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 244 SYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp CCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred CCcccccCccHHHHHHHHHHHHHhc
Confidence 9999999876 88999999999875
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-32 Score=215.69 Aligned_cols=230 Identities=16% Similarity=0.162 Sum_probs=164.5
Q ss_pred CCeEEEEEecCCCC--CCceEEEeCCCCCccccc---------HHHHHH---Hh-hccceEEeecCCC-CCCCCCCCC--
Q 024228 30 PGTILNIWVPKKTT--KKHAVVLLHPFGFDGILT---------WQFQVL---AL-AKTYEVYVPDFLF-FGSSVTDRP-- 91 (270)
Q Consensus 30 ~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~~---------~~~~~~---~l-~~~~~v~~~d~~g-~G~s~~~~~-- 91 (270)
+|.+++|...++.. ++|+|||+||++++.. . |..+++ .| .+.|+|+++|+|| +|.|..+..
T Consensus 42 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~ 120 (377)
T 2b61_A 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAE-PYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSIN 120 (377)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSC-SCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBC
T ss_pred cceeEEEEecccccccCCCeEEEeCCCCCccc-cccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccC
Confidence 56788898777532 3689999999999998 7 888875 47 4459999999999 688875531
Q ss_pred ------------CCChHHHHHHHHHHHHHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--H
Q 024228 92 ------------DRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--A 156 (270)
Q Consensus 92 ------------~~~~~~~~~~~~~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~ 156 (270)
.++.+++++|+.++++.++.++++ |+||||||.+|+.+|.++|++|+++|++++.......... .
T Consensus 121 ~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 200 (377)
T 2b61_A 121 PQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNH 200 (377)
T ss_dssp TTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHH
T ss_pred ccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHH
Confidence 468999999999999999999998 9999999999999999999999999999987654311100 0
Q ss_pred -----hhhhcc--------------------c---------hhhhhhccc------------ccHHHHHH----------
Q 024228 157 -----ALERIG--------------------Y---------ESWVDFLLP------------KTADALKV---------- 180 (270)
Q Consensus 157 -----~~~~~~--------------------~---------~~~~~~~~~------------~~~~~~~~---------- 180 (270)
...... . ......+.. .....+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (377)
T 2b61_A 201 VMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERF 280 (377)
T ss_dssp HHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhcccc
Confidence 000000 0 000000000 00000000
Q ss_pred -------HHHhhh-hcC---CCChhhhhhhhheeeeEEEcCCCccCCH----HHHHHHHHHhcCCceEEEec-CCCccee
Q 024228 181 -------QFDIAC-YKL---PTLPAFVYKHILEKIHLLWGENDKIFDM----QVARNLKEQVGQNATMESIE-KAGHLVN 244 (270)
Q Consensus 181 -------~~~~~~-~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~~~~-~~gH~~~ 244 (270)
...... +.. .......+..+.+|+|+++|++|.++|+ +..+.+.+.++ ++++++++ ++||+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~~gH~~~ 359 (377)
T 2b61_A 281 DANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGV-DLHFYEFPSDYGHDAF 359 (377)
T ss_dssp CHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-EEEEEEECCTTGGGHH
T ss_pred ChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCC-CceEEEeCCCCCchhh
Confidence 000000 000 0111334555669999999999999999 88888888887 89999999 9999999
Q ss_pred ecchHhHHHHHHHHHHh
Q 024228 245 LERPFVYNRQLKTILAS 261 (270)
Q Consensus 245 ~~~~~~~~~~i~~fl~~ 261 (270)
.++|+++++.|.+||++
T Consensus 360 ~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 360 LVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHCHHHHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHhc
Confidence 99999999999999975
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=214.66 Aligned_cols=239 Identities=16% Similarity=0.147 Sum_probs=167.0
Q ss_pred ceeEEEeecCCeEEEEEecCCC-------CCCceEEEeCCCCCcccccHHHHHH------Hhhcc-ceEEeecCCCCCCC
Q 024228 21 MTQRTIEIEPGTILNIWVPKKT-------TKKHAVVLLHPFGFDGILTWQFQVL------ALAKT-YEVYVPDFLFFGSS 86 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~-------~~~~~vv~~hG~~~~~~~~~~~~~~------~l~~~-~~v~~~d~~g~G~s 86 (270)
.+...+.+.||..++++...+. +++|+||++||++++.. .|..+.. .|++. |+|+++|+||||.|
T Consensus 27 ~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~-~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S 105 (377)
T 1k8q_A 27 AEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGYDVWLGNSRGNTWA 105 (377)
T ss_dssp CEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTS
T ss_pred ceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh-hhhcCCCcccHHHHHHHCCCCEEEecCCCCCCC
Confidence 4677788889999988665322 26789999999999988 8766544 88887 99999999999999
Q ss_pred CCC-----CC----CCChHHHHH-HHHHHHH----HhCCCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCC
Q 024228 87 VTD-----RP----DRTASFQAE-CMAKGLR----KLGVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGL 149 (270)
Q Consensus 87 ~~~-----~~----~~~~~~~~~-~~~~~l~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~ 149 (270)
... .. .++.+++++ |+.++++ .++.++++++||||||.+++.+|.++|+ +|+++|+++|....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~ 185 (377)
T 1k8q_A 106 RRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATV 185 (377)
T ss_dssp CEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCC
T ss_pred CCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhc
Confidence 862 21 568888888 8777655 5688899999999999999999999998 89999999987543
Q ss_pred Cchhhh-Hhh---------hhccc----------hhhhhhc-------------------------ccc-----------
Q 024228 150 TESVSN-AAL---------ERIGY----------ESWVDFL-------------------------LPK----------- 173 (270)
Q Consensus 150 ~~~~~~-~~~---------~~~~~----------~~~~~~~-------------------------~~~----------- 173 (270)
...... ... ..... ....... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (377)
T 1k8q_A 186 KYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPA 265 (377)
T ss_dssp SSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCC
T ss_pred ccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCCC
Confidence 211000 000 00000 0000000 000
Q ss_pred --cHHHHHHHHHhhh---hcCC-C--------------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCce-
Q 024228 174 --TADALKVQFDIAC---YKLP-T--------------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNAT- 232 (270)
Q Consensus 174 --~~~~~~~~~~~~~---~~~~-~--------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~- 232 (270)
....+..+..... .... + .+...+.++.+|+|+++|++|.++|++.++.+.+.++ +.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~ 344 (377)
T 1k8q_A 266 GTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLP-NLIY 344 (377)
T ss_dssp CEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCT-TEEE
T ss_pred CccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCc-Cccc
Confidence 0000000000000 0000 0 0111255666999999999999999999999999987 766
Q ss_pred EEEecCCCcceee---cchHhHHHHHHHHHHh
Q 024228 233 MESIEKAGHLVNL---ERPFVYNRQLKTILAS 261 (270)
Q Consensus 233 ~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 261 (270)
+++++++||+.++ ++|+++.+.|.+||++
T Consensus 345 ~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 345 HRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred EEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 9999999999986 8899999999999975
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-33 Score=202.62 Aligned_cols=196 Identities=20% Similarity=0.265 Sum_probs=164.8
Q ss_pred ceeEEEeecCCeEEEEEecCC--CCCCceEEEeCCCCCcccccHHH--HHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh
Q 024228 21 MTQRTIEIEPGTILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQF--QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
++..++.. +|.+++|+..++ .+++|+||++||++++.. .|.. +++.|++. |.|+++|+||+|.|.......+.
T Consensus 7 ~~~~~~~~-~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~ 84 (210)
T 1imj_A 7 QREGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPI 84 (210)
T ss_dssp ECCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCT
T ss_pred cccceEee-CCeEEEEEEeCCCCCCCCceEEEECCCCCccc-eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchh
Confidence 34566777 799998877533 246899999999999998 9988 58889888 99999999999999877655666
Q ss_pred HHHH--HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 96 SFQA--ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 96 ~~~~--~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
+... +++.++++.++.++++++|||+||.+++.++.++|++++++|++++......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~---------------------- 142 (210)
T 1imj_A 85 GELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI---------------------- 142 (210)
T ss_dssp TSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS----------------------
T ss_pred hhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc----------------------
Confidence 6666 8999999999999999999999999999999999999999999998653110
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHH
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 253 (270)
....+..+.+|+++++|++|. ++.+..+.+ +.++ +.++++++++||..+.++++++.+
T Consensus 143 -------------------~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~-~~~~~~~~~~~H~~~~~~~~~~~~ 200 (210)
T 1imj_A 143 -------------------NAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQLP-NHRVLIMKGAGHPCYLDKPEEWHT 200 (210)
T ss_dssp -------------------CHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTSS-SEEEEEETTCCTTHHHHCHHHHHH
T ss_pred -------------------cchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhCC-CCCEEEecCCCcchhhcCHHHHHH
Confidence 011223344899999999999 999999988 7776 899999999999999999999999
Q ss_pred HHHHHHHhh
Q 024228 254 QLKTILASL 262 (270)
Q Consensus 254 ~i~~fl~~~ 262 (270)
.|.+||+++
T Consensus 201 ~i~~fl~~~ 209 (210)
T 1imj_A 201 GLLDFLQGL 209 (210)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 999999864
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=221.38 Aligned_cols=241 Identities=17% Similarity=0.194 Sum_probs=171.2
Q ss_pred EEEeecCCeEEEEEecCCCC--------CCceEEEeCCCCCcccccHHHHHHHhhc---c--c---eEEeecCCCCCCCC
Q 024228 24 RTIEIEPGTILNIWVPKKTT--------KKHAVVLLHPFGFDGILTWQFQVLALAK---T--Y---EVYVPDFLFFGSSV 87 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~--------~~~~vv~~hG~~~~~~~~~~~~~~~l~~---~--~---~v~~~d~~g~G~s~ 87 (270)
..+...||.+++|+..++.. ++|+||++||++++.. .|..+++.|++ + | +|+++|+||||.|+
T Consensus 23 ~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~ 101 (398)
T 2y6u_A 23 STLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSA 101 (398)
T ss_dssp SBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-GGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHH
T ss_pred ccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-HHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCC
Confidence 34445589999997665422 2479999999999999 99999999983 2 7 99999999999997
Q ss_pred CCC-----CCCChHHHHHHHHHHHHHhC----CCc--eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc-----
Q 024228 88 TDR-----PDRTASFQAECMAKGLRKLG----VEK--CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE----- 151 (270)
Q Consensus 88 ~~~-----~~~~~~~~~~~~~~~l~~~~----~~~--~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~----- 151 (270)
... ..++++++++|+.++++.+. ..+ ++|+||||||.+++.+|.++|++|+++|++++......
T Consensus 102 ~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 181 (398)
T 2y6u_A 102 VRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAG 181 (398)
T ss_dssp HHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCC
T ss_pred CCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccccc
Confidence 542 35789999999999999854 344 99999999999999999999999999999998765411
Q ss_pred -------------hhhhHhhhhcc-----chhhhhh------cccccHHHHHHHHHhhh---------------------
Q 024228 152 -------------SVSNAALERIG-----YESWVDF------LLPKTADALKVQFDIAC--------------------- 186 (270)
Q Consensus 152 -------------~~~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~~--------------------- 186 (270)
........... ....... ...........+.....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (398)
T 2y6u_A 182 RPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQ 261 (398)
T ss_dssp CTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHH
T ss_pred cccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCchh
Confidence 00000000000 0000000 00011111111111000
Q ss_pred ----hcCC----CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 187 ----YKLP----TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 187 ----~~~~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
+... ......+..+.+|+|+|+|++|.++|++.++.+.+.++ ++++++++++||+++.++|+++.+.|.+|
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 340 (398)
T 2y6u_A 262 NLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ-NYHLDVIPGGSHLVNVEAPDLVIERINHH 340 (398)
T ss_dssp HHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS-SEEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred hhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC-CceEEEeCCCCccchhcCHHHHHHHHHHH
Confidence 0000 00113345556999999999999999999999999998 89999999999999999999999999999
Q ss_pred HHhhhhhc
Q 024228 259 LASLVHAN 266 (270)
Q Consensus 259 l~~~~~~~ 266 (270)
|++.....
T Consensus 341 l~~~~~~~ 348 (398)
T 2y6u_A 341 IHEFVLTS 348 (398)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhH
Confidence 98876543
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=228.70 Aligned_cols=239 Identities=21% Similarity=0.232 Sum_probs=171.2
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCC-----CCCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTD-----RPDR 93 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~-----~~~~ 93 (270)
.+++.+++++ +|.+++|...++ +|+||++||++++.. .|..+++.|+++|+|+++|+||||.|..+ ...+
T Consensus 3 ~~~~~~~~~~-~g~~~~~~~~g~---~p~vv~lHG~~~~~~-~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~~ 77 (304)
T 3b12_A 3 EGFERRLVDV-GDVTINCVVGGS---GPALLLLHGFPQNLH-MWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANY 77 (304)
Confidence 3566777887 799999988764 789999999999999 99999999996699999999999999876 4567
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH-----------------
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA----------------- 156 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~----------------- 156 (270)
+.+++++|+.++++.++.++++|+||||||.+++.+|.++|++|+++|++++...........
T Consensus 78 ~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
T 3b12_A 78 SFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPA 157 (304)
Confidence 889999999999999998999999999999999999999999999999999875432111000
Q ss_pred -hhhhc---cchhhhhh-c-----------ccccHHHHHHHHHh--------hhhcC--C----CChhhhhhhhheeeeE
Q 024228 157 -ALERI---GYESWVDF-L-----------LPKTADALKVQFDI--------ACYKL--P----TLPAFVYKHILEKIHL 206 (270)
Q Consensus 157 -~~~~~---~~~~~~~~-~-----------~~~~~~~~~~~~~~--------~~~~~--~----~~~~~~~~~~~~P~l~ 206 (270)
..... ........ . .......+...... ..+.. . ......+..+.+|+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 237 (304)
T 3b12_A 158 PYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALV 237 (304)
Confidence 00000 00000000 0 00000000000000 00000 0 0000114556699999
Q ss_pred EEcCCCccC-CHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 207 LWGENDKIF-DMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 207 i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
|+|++|..+ +....+.+.+..+ +.+++++ ++||+++.++|+++++.|.+||++...
T Consensus 238 i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 238 FSGSAGLMHSLFEMQVVWAPRLA-NMRFASL-PGGHFFVDRFPDDTARILREFLSDARS 294 (304)
Confidence 999999554 5566667777776 7888899 999999999999999999999998754
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=208.58 Aligned_cols=219 Identities=15% Similarity=0.113 Sum_probs=157.8
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchh
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~G 122 (270)
.++|+|||+||++++.. .|..+++.|+++|.|+++|+||+|.|.......+.+++++++.++++.++.++++|+|||+|
T Consensus 18 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~G 96 (267)
T 3fla_A 18 DARARLVCLPHAGGSAS-FFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPFGDRPLALFGHSMG 96 (267)
T ss_dssp TCSEEEEEECCTTCCGG-GGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGGTTSCEEEEEETHH
T ss_pred CCCceEEEeCCCCCCch-hHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeChh
Confidence 46899999999999998 99999999988899999999999999887777899999999999999999899999999999
Q ss_pred HHHHHHHHhhCccc----cccEEEecccCCCCchh-------hhH---hhhhccchhhhhhcccccHHHHHHHHHhhh-h
Q 024228 123 GMVGFKMAEMYPDL----VESMVVTCSVMGLTESV-------SNA---ALERIGYESWVDFLLPKTADALKVQFDIAC-Y 187 (270)
Q Consensus 123 g~~a~~~a~~~p~~----v~~~i~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 187 (270)
|.+++.+|.++|++ +++++++++..+..... ... ...............+.........+.... .
T Consensus 97 g~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (267)
T 3fla_A 97 AIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELLAMVLPAIRSDYRA 176 (267)
T ss_dssp HHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHHHHHHHHHHHHHHHh
Confidence 99999999999986 89999998765422110 000 000000000000000000000000000000 0
Q ss_pred cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 188 KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 188 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
...+.... ...+.+|+++++|++|.++|.+..+.+.+.++.+.+++++++ ||+.+.++|+++.+.|.+||++...
T Consensus 177 ~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 177 VETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVDQAAPMIATMTEKLAGPAL 251 (267)
T ss_dssp HHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHHTHHHHHHHHHHHTC----
T ss_pred hhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-CceeeccCHHHHHHHHHHHhccccc
Confidence 00000000 034558999999999999999999999988874489999998 9999999999999999999987654
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=211.64 Aligned_cols=232 Identities=14% Similarity=0.086 Sum_probs=162.6
Q ss_pred CCeEEEEEecCCCC--CCceEEEeCCCCCcccc------------cHHHHHH---Hh-hccceEEeecCCC--CCCCCCC
Q 024228 30 PGTILNIWVPKKTT--KKHAVVLLHPFGFDGIL------------TWQFQVL---AL-AKTYEVYVPDFLF--FGSSVTD 89 (270)
Q Consensus 30 ~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~------------~~~~~~~---~l-~~~~~v~~~d~~g--~G~s~~~ 89 (270)
+|.+++|...++.. ++|+|||+||++++... .|..+++ .| .++|+|+++|+|| +|.|...
T Consensus 29 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~ 108 (366)
T 2pl5_A 29 SPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 108 (366)
T ss_dssp SSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred cCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCC
Confidence 45588898777632 36899999999998762 4677663 34 4459999999999 8988753
Q ss_pred C---C----------CCChHHHHHHHHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh
Q 024228 90 R---P----------DRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN 155 (270)
Q Consensus 90 ~---~----------~~~~~~~~~~~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~ 155 (270)
. . .++.+++++|+.+++++++.+++ +|+||||||.+|+.+|.++|++|+++|++++..........
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 188 (366)
T 2pl5_A 109 SIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIA 188 (366)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHH
T ss_pred CCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccch
Confidence 2 1 36899999999999999999998 89999999999999999999999999999988654321100
Q ss_pred Hh--hh-hc--------------------------------cchhhhhhc----c------------------------c
Q 024228 156 AA--LE-RI--------------------------------GYESWVDFL----L------------------------P 172 (270)
Q Consensus 156 ~~--~~-~~--------------------------------~~~~~~~~~----~------------------------~ 172 (270)
.. .. .+ ........+ . .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (366)
T 2pl5_A 189 FNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDR 268 (366)
T ss_dssp HHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSC
T ss_pred hhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhcc
Confidence 00 00 00 000000000 0 0
Q ss_pred ccHHHHHHHHHhhhhcCCC---ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEe-cCCCcceee
Q 024228 173 KTADALKVQFDIACYKLPT---LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESI-EKAGHLVNL 245 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~-~~~gH~~~~ 245 (270)
.....+............. .....+.++.+|+|+++|++|.++|++.++.+.+.++. +++++++ +++||+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 348 (366)
T 2pl5_A 269 FDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFL 348 (366)
T ss_dssp CCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGGG
T ss_pred cChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcchhh
Confidence 0000111111100000000 01124455669999999999999999999999998862 6899999 899999999
Q ss_pred cchHhHHHHHHHHHHh
Q 024228 246 ERPFVYNRQLKTILAS 261 (270)
Q Consensus 246 ~~~~~~~~~i~~fl~~ 261 (270)
++|+++.+.|.+||++
T Consensus 349 e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 349 LKNPKQIEILKGFLEN 364 (366)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred cChhHHHHHHHHHHcc
Confidence 9999999999999975
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-32 Score=218.33 Aligned_cols=231 Identities=14% Similarity=0.154 Sum_probs=164.8
Q ss_pred CCeEEEEEecCCC--CCCceEEEeCCCCCccccc---HHHHHH---Hh-hccceEEeecCCC--CCCCCCCC--------
Q 024228 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGILT---WQFQVL---AL-AKTYEVYVPDFLF--FGSSVTDR-------- 90 (270)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~---~~~~~~---~l-~~~~~v~~~d~~g--~G~s~~~~-------- 90 (270)
+|.+++|...++. .++++||++||++++.. . |..++. .| .++|+|+++|+|| +|.|....
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~-~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~ 170 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAH-VTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQ 170 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSC-GGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccc-hhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccc
Confidence 4557888877753 23689999999999998 7 888775 57 4459999999999 68886321
Q ss_pred -------CCCChHHHHHHHHHHHHHhCCCc-eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH------
Q 024228 91 -------PDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA------ 156 (270)
Q Consensus 91 -------~~~~~~~~~~~~~~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~------ 156 (270)
..++.+++++|+.+++++++.++ ++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 171 ~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 250 (444)
T 2vat_A 171 RPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQ 250 (444)
T ss_dssp CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHH
Confidence 13689999999999999999999 9999999999999999999999999999999876543211000
Q ss_pred -hhh----------------------h-------ccchhhhhhcccc---------------------------------
Q 024228 157 -ALE----------------------R-------IGYESWVDFLLPK--------------------------------- 173 (270)
Q Consensus 157 -~~~----------------------~-------~~~~~~~~~~~~~--------------------------------- 173 (270)
... . .....+...+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (444)
T 2vat_A 251 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 330 (444)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCch
Confidence 000 0 0000000000000
Q ss_pred -cHHHHHH-----HH------------Hhhh-hcC----CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC
Q 024228 174 -TADALKV-----QF------------DIAC-YKL----PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN 230 (270)
Q Consensus 174 -~~~~~~~-----~~------------~~~~-~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 230 (270)
....+.. +. .... +.. .......+.++.+|+|+|+|++|.++|.+.++.+.+.++ +
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p-~ 409 (444)
T 2vat_A 331 EAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIP-N 409 (444)
T ss_dssp GGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHST-T
T ss_pred hhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCC-C
Confidence 0000000 00 0000 000 001334456667999999999999999999999999998 8
Q ss_pred ceEEEec-CCCcceeecchHhHHHHHHHHHHhh
Q 024228 231 ATMESIE-KAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 231 ~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+++++++ ++||+.+.++|+++++.|.+||++.
T Consensus 410 ~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 410 SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 9999999 8999999999999999999999764
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-30 Score=205.69 Aligned_cols=239 Identities=15% Similarity=0.174 Sum_probs=163.8
Q ss_pred CceeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhc----------cceEEeecCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAK----------TYEVYVPDFLFFGSSVT 88 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~----------~~~v~~~d~~g~G~s~~ 88 (270)
.+....+.+ +|.+++|...++. +++++|||+||++++.. .|..+++.|.+ .|+|+++|+||||.|+.
T Consensus 67 ~~~~~~~~i-~g~~i~~~~~~~~~~~~~plll~HG~~~s~~-~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~ 144 (388)
T 4i19_A 67 QYPQFTTEI-DGATIHFLHVRSPEPDATPMVITHGWPGTPV-EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGP 144 (388)
T ss_dssp TSCEEEEEE-TTEEEEEEEECCSSTTCEEEEEECCTTCCGG-GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCC
T ss_pred cCCcEEEEE-CCeEEEEEEccCCCCCCCeEEEECCCCCCHH-HHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 344455556 8999999765432 45789999999999999 99999999998 79999999999999997
Q ss_pred CCC-CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh------hhH---hh
Q 024228 89 DRP-DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV------SNA---AL 158 (270)
Q Consensus 89 ~~~-~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~------~~~---~~ 158 (270)
+.. ..+.+++++++.++++.++.++++++||||||.+++.+|.++|++|++++++++........ ... ..
T Consensus 145 ~~~~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~l~~~~~~~~ 224 (388)
T 4i19_A 145 LKSAGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNLSGEPGELETLSDADKARL 224 (388)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCBCCCGGGGGGCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCCCCcccccccCCHHHHHHH
Confidence 765 58999999999999999999999999999999999999999999999999998754322100 000 00
Q ss_pred hhcc-c----------------------------------hhhhhhccc-------ccHHHHHHHHH-----------hh
Q 024228 159 ERIG-Y----------------------------------ESWVDFLLP-------KTADALKVQFD-----------IA 185 (270)
Q Consensus 159 ~~~~-~----------------------------------~~~~~~~~~-------~~~~~~~~~~~-----------~~ 185 (270)
.... + ..+..+... -....+..... ..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~ll~~~~~y~~t~~~~~s~~ 304 (388)
T 4i19_A 225 AVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDLMLTHISLFWFTATGGSAAQ 304 (388)
T ss_dssp HTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHHHHHHHHHHHhcCCchhHHH
Confidence 0000 0 000000000 00000000000 00
Q ss_pred hhcCCC--C----hhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 186 CYKLPT--L----PAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 186 ~~~~~~--~----~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
.+.... . .......+.+|+++++|.+|...++. .++. ..+...++.+++++||++++|+|+.+++.|.+|
T Consensus 305 ~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~~~~---~~~~~~~~~~~~~gGHf~~~E~Pe~~~~~l~~f 381 (388)
T 4i19_A 305 AHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPVRSLAER---DFKQIVHWAELDRGGHFSAMEEPDLFVDDLRTF 381 (388)
T ss_dssp HHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCCHHHHHH---HBTTEEEEEECSSCBSSHHHHCHHHHHHHHHHH
T ss_pred HHHHhhcccccccccccCCCCCCCEEEEeCCcccccccHHHHHH---hCCCeEEEEECCCCcCccchhcHHHHHHHHHHH
Confidence 000000 0 00022334599999999999655443 3322 222246778899999999999999999999999
Q ss_pred HHhhh
Q 024228 259 LASLV 263 (270)
Q Consensus 259 l~~~~ 263 (270)
+++..
T Consensus 382 l~~~~ 386 (388)
T 4i19_A 382 NRTLK 386 (388)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98764
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.98 E-value=9.4e-31 Score=200.82 Aligned_cols=225 Identities=18% Similarity=0.135 Sum_probs=166.3
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAEC 101 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 101 (270)
...+.. +|.++.++...+. +.|+||++||++++.. .|..+++.|.+. |.|+++|+||+|.|.......+...+++|
T Consensus 8 ~~~~~~-~g~~l~~~~~~p~-~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d 84 (290)
T 3ksr_A 8 SIEIPV-GQDELSGTLLTPT-GMPGVLFVHGWGGSQH-HSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQNLDD 84 (290)
T ss_dssp EEEEEE-TTEEEEEEEEEEE-SEEEEEEECCTTCCTT-TTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHHHHHH
T ss_pred eEEecC-CCeEEEEEEecCC-CCcEEEEeCCCCCCcC-cHHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHHHHHH
Confidence 334444 7888887766654 6899999999999999 999999999997 99999999999999887777889999999
Q ss_pred HHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccH
Q 024228 102 MAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (270)
Q Consensus 102 ~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
+.++++.+. .++++++|||+||.+++.++.++| ++++++++|................. ..
T Consensus 85 ~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~~~---------~~-- 151 (290)
T 3ksr_A 85 IKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLNA---------DP-- 151 (290)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHHHH---------ST--
T ss_pred HHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccccccC---------Ch--
Confidence 999999883 247999999999999999999988 89999998876533211000000000 00
Q ss_pred HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC--CceEEEecCCCcceee-cchHhHH
Q 024228 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ--NATMESIEKAGHLVNL-ERPFVYN 252 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~~~~~~~ 252 (270)
.+..+...............+..+.+|+|+++|++|.+++.+..+.+.+.++. +.++++++++||.+.. +.++++.
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 230 (290)
T 3ksr_A 152 -DLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYT 230 (290)
T ss_dssp -THHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHH
T ss_pred -hhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHH
Confidence 00000000000001111223445558999999999999999999999999872 2569999999998866 4788999
Q ss_pred HHHHHHHHhhhh
Q 024228 253 RQLKTILASLVH 264 (270)
Q Consensus 253 ~~i~~fl~~~~~ 264 (270)
+.+.+||++...
T Consensus 231 ~~i~~fl~~~~~ 242 (290)
T 3ksr_A 231 RALIDWLTEMVV 242 (290)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999987654
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=200.59 Aligned_cols=217 Identities=15% Similarity=0.198 Sum_probs=156.9
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCC-ChHHHHHHHHHHHHHhCCC--ceEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDR-TASFQAECMAKGLRKLGVE--KCTLVG 118 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~-~~~~~~~~~~~~l~~~~~~--~~~l~G 118 (270)
++|+||++||++++.. .|..+++.|.+. |.|+++|+||||.|+... ... +.+.+.+|+.++++.+... +++++|
T Consensus 21 ~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~l~G 99 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN-DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVFG 99 (251)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCceEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 4789999999999999 999999999987 999999999999996433 123 7888899999998888654 999999
Q ss_pred EchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhc-ccccHHHHHHHHHhhhh---cCCCChh
Q 024228 119 VSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL-LPKTADALKVQFDIACY---KLPTLPA 194 (270)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~ 194 (270)
||+||.+++.+|.++|++++++++++|............ .... ....... .......+......... .......
T Consensus 100 ~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (251)
T 3dkr_A 100 LSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-LKYA-EYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVA 177 (251)
T ss_dssp SHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-HHHH-HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-HHHH-HHHHhhcccCcchhhHHhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999988876433222211 1100 0000000 00001111100000000 0000012
Q ss_pred hhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC--CceEEEecCCCcceeecc-hHhHHHHHHHHHHhhh
Q 024228 195 FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ--NATMESIEKAGHLVNLER-PFVYNRQLKTILASLV 263 (270)
Q Consensus 195 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~~ 263 (270)
..+.++.+|+++++|++|.++|++.++.+.+.++. +.++++++++||..+.+. ++++.+.|.+||++..
T Consensus 178 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 178 ADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp HTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred ccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 23445559999999999999999999999999874 459999999999998875 9999999999998764
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=184.59 Aligned_cols=192 Identities=15% Similarity=0.152 Sum_probs=147.1
Q ss_pred CceeEEEeecCCeEEEEEecCCC--CCCceEEEeCCC-----CCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPF-----GFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP 91 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~--~~~~~vv~~hG~-----~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~ 91 (270)
..+...++..+| ++.++...+. +++|+||++||+ ..+.. .|..+++.|++. |.|+++|+||+|.|.....
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 82 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNK-VVTTLAKALDELGLKTVRFNFRGVGKSQGRYD 82 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCH-HHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC
T ss_pred ccceEEEECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCc-hHHHHHHHHHHCCCEEEEEecCCCCCCCCCcc
Confidence 467778888889 8877655443 467899999994 33344 678889999887 9999999999999986532
Q ss_pred CCChHHHHHHHHHHHHH----hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhh
Q 024228 92 DRTASFQAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWV 167 (270)
Q Consensus 92 ~~~~~~~~~~~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (270)
......+|+.++++. ++.++++++|||+||.+++.++ .+| +++++|++++.......
T Consensus 83 --~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~~~--------------- 143 (208)
T 3trd_A 83 --NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYEGF--------------- 143 (208)
T ss_dssp --TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSGGG---------------
T ss_pred --chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccCCc---------------
Confidence 223334555544444 3567999999999999999999 666 79999999987611000
Q ss_pred hhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 168 DFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
.......+|+++++|++|.++|++..+.+.+.++.+.++++++++||.+..+.
T Consensus 144 ---------------------------~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 196 (208)
T 3trd_A 144 ---------------------------ASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRL 196 (208)
T ss_dssp ---------------------------TTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH
T ss_pred ---------------------------hhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccccH
Confidence 00111138999999999999999999999999984599999999999987665
Q ss_pred hHhHHHHHHHHHH
Q 024228 248 PFVYNRQLKTILA 260 (270)
Q Consensus 248 ~~~~~~~i~~fl~ 260 (270)
+++.+.|.+||+
T Consensus 197 -~~~~~~i~~fl~ 208 (208)
T 3trd_A 197 -IELRELLVRNLA 208 (208)
T ss_dssp -HHHHHHHHHHHC
T ss_pred -HHHHHHHHHHhC
Confidence 778899999873
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-30 Score=189.70 Aligned_cols=212 Identities=15% Similarity=0.020 Sum_probs=158.5
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCC------
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT------ 94 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~------ 94 (270)
+..++++ +|..+.++.+.+ ++|+||++||++++.. .|..+++.|++. |.|+++|+||+|.|........
T Consensus 4 ~~~~~~~-~g~~~~~~~~~~--~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 79 (238)
T 1ufo_A 4 RTERLTL-AGLSVLARIPEA--PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVE 79 (238)
T ss_dssp EEEEEEE-TTEEEEEEEESS--CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHH
T ss_pred eeccccc-CCEEEEEEecCC--CccEEEEECCCcccch-HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhh
Confidence 3445555 788887776665 6899999999999998 999999999887 9999999999999986554433
Q ss_pred -----hHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhh
Q 024228 95 -----ASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (270)
Q Consensus 95 -----~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
.+..++|+.++++.+ +.++++++|||+||.+++.++.++|+.+.+++++++......... . .
T Consensus 80 ~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~---~----- 149 (238)
T 1ufo_A 80 EVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQG--Q---V----- 149 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTT--C---C-----
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhh--h---c-----
Confidence 566778887777765 447999999999999999999999998899888877543221100 0 0
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhh-heeeeEEEcCCCccCCHHHHHHHHHHhcC-----CceEEEecCCC
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI-LEKIHLLWGENDKIFDMQVARNLKEQVGQ-----NATMESIEKAG 240 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g 240 (270)
..+.. .. .... ......+..+ .+|+++++|++|.++|.+.++.+.+.++. +.++++++++|
T Consensus 150 ---~~~~~---~~-~~~~------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (238)
T 1ufo_A 150 ---VEDPG---VL-ALYQ------APPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAG 216 (238)
T ss_dssp ---CCCHH---HH-HHHH------SCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCC
T ss_pred ---cCCcc---cc-hhhc------CChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCC
Confidence 00000 00 0100 1112223444 58999999999999999999999998862 78999999999
Q ss_pred cceeecchHhHHHHHHHHHH
Q 024228 241 HLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~ 260 (270)
|..+.+.++.+.+.|.+|++
T Consensus 217 H~~~~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 217 HTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp SSCCHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHh
Confidence 99988888777777777765
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=203.75 Aligned_cols=208 Identities=13% Similarity=0.019 Sum_probs=149.1
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-CCCceEEEEEchhHH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-GVEKCTLVGVSYGGM 124 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~l~G~S~Gg~ 124 (270)
++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.......+.+++++++.++++.+ +.++++|+||||||.
T Consensus 52 ~~lvllHG~~~~~~-~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg~ 130 (280)
T 3qmv_A 52 LRLVCFPYAGGTVS-AFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGAL 130 (280)
T ss_dssp EEEEEECCTTCCGG-GGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHHHH
T ss_pred ceEEEECCCCCChH-HHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHhHH
Confidence 78999999999999 9999999999889999999999999987777789999999999999999 778999999999999
Q ss_pred HHHHHHhhCccccc----cEEEecccCCCCchhh-------hHh---hhhccchh--h--hhhcccccHHHHHHHHHhhh
Q 024228 125 VGFKMAEMYPDLVE----SMVVTCSVMGLTESVS-------NAA---LERIGYES--W--VDFLLPKTADALKVQFDIAC 186 (270)
Q Consensus 125 ~a~~~a~~~p~~v~----~~i~~~~~~~~~~~~~-------~~~---~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~ 186 (270)
+|+.+|.++|+++. .+++.++......... ... ........ . ...........+...+....
T Consensus 131 va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (280)
T 3qmv_A 131 LAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACE 210 (280)
T ss_dssp HHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877 7777765432211000 000 00000000 0 00000001111111111110
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee--cchHhHHHHHHHHH
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL--ERPFVYNRQLKTIL 259 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl 259 (270)
.. .. .....+.+|+++++|++|.+++.+..+.+.+.++...+++++++ ||+.+. ++++++++.|.+||
T Consensus 211 ~~-~~---~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 211 RY-DW---HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPG-NHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp TC-CC---CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEEE-ETTGGGSSHHHHHHHHHHHTTC
T ss_pred hc-cc---cCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEecC-CCeEEcCchhHHHHHHHHHhhC
Confidence 00 00 01234559999999999999999999988888874467888875 999999 88999999998874
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-29 Score=186.29 Aligned_cols=195 Identities=15% Similarity=0.147 Sum_probs=153.0
Q ss_pred eEEEeecCCeEEEEEecCC-CCCCceEEEeCCCCCccc----ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChH
Q 024228 23 QRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGI----LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
...+..++| ++.++...+ .+++|+||++||+++... ..|..+++.|++. |.|+++|+||+|.|..... ....
T Consensus 25 ~~~~~~~~g-~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~ 102 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD-HGAG 102 (249)
T ss_dssp EEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-SSHH
T ss_pred EEEEECCCc-eEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-Cccc
Confidence 777888777 776543332 245789999999854332 2457888889887 9999999999999986543 3444
Q ss_pred HHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcc
Q 024228 97 FQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLL 171 (270)
Q Consensus 97 ~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (270)
.. +|+.++++.+. .++++++|||+||.+++.++.++|+ ++++|++++......
T Consensus 103 ~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-------------------- 160 (249)
T 2i3d_A 103 EL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD-------------------- 160 (249)
T ss_dssp HH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC--------------------
T ss_pred hH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh--------------------
Confidence 44 77777777663 2479999999999999999999998 999999998764211
Q ss_pred cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC----CceEEEecCCCcceeecc
Q 024228 172 PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ----NATMESIEKAGHLVNLER 247 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~ 247 (270)
...+..+.+|+++++|++|.++|.+..+.+.+.++. +.+++++++++|... +.
T Consensus 161 ----------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~ 217 (249)
T 2i3d_A 161 ----------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GK 217 (249)
T ss_dssp ----------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TC
T ss_pred ----------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cC
Confidence 001223348999999999999999999999999874 679999999999987 88
Q ss_pred hHhHHHHHHHHHHhhhh
Q 024228 248 PFVYNRQLKTILASLVH 264 (270)
Q Consensus 248 ~~~~~~~i~~fl~~~~~ 264 (270)
++++.+.|.+||++...
T Consensus 218 ~~~~~~~i~~fl~~~l~ 234 (249)
T 2i3d_A 218 VDELMGECEDYLDRRLN 234 (249)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999988764
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=191.08 Aligned_cols=196 Identities=15% Similarity=0.094 Sum_probs=154.5
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccH--HHHHHHhhcc-ceEEeecCCCCCCCCCCCCC----CC
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTW--QFQVLALAKT-YEVYVPDFLFFGSSVTDRPD----RT 94 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~----~~ 94 (270)
+...+.. +|.++.++...+.+++|+||++||++++.. .| ..+++.|++. |.|+++|+||+|.|...... .+
T Consensus 13 ~~~~~~~-~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~ 90 (223)
T 2o2g_A 13 YAVSVSV-GEVKLKGNLVIPNGATGIVLFAHGSGSSRY-SPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFD 90 (223)
T ss_dssp EEEEEEE-TTEEEEEEEECCTTCCEEEEEECCTTCCTT-CHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTC
T ss_pred eEEEEec-CCeEEEEEEecCCCCceEEEEecCCCCCCC-ccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCc
Confidence 3444454 899998877665556899999999998887 54 4678888887 99999999999987644322 68
Q ss_pred hHHHHHHHHHHHHHhCCC------ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhh
Q 024228 95 ASFQAECMAKGLRKLGVE------KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVD 168 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~------~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (270)
.+.+++|+.++++.+... +++++|||+||.+++.++.++|++++++|++++.....
T Consensus 91 ~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------ 152 (223)
T 2o2g_A 91 IGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------------------ 152 (223)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC------------------
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC------------------
Confidence 888899999998887433 89999999999999999999999999999998753210
Q ss_pred hcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee-cc
Q 024228 169 FLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ER 247 (270)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~ 247 (270)
...+..+.+|+++++|++|.++|.+..+.+.+..+ +.+++++++++|.+.. +.
T Consensus 153 -------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~ 206 (223)
T 2o2g_A 153 -------------------------PSALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQT-SKRLVIIPRASHLFEEPGA 206 (223)
T ss_dssp -------------------------TTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHCCS-SEEEEEETTCCTTCCSTTH
T ss_pred -------------------------HHHHhcCCCCEEEEEccccCCCCHHHHHHHHhhCC-CeEEEEeCCCCcccCChHH
Confidence 01133344899999999999998665555544434 8999999999999766 56
Q ss_pred hHhHHHHHHHHHHhhh
Q 024228 248 PFVYNRQLKTILASLV 263 (270)
Q Consensus 248 ~~~~~~~i~~fl~~~~ 263 (270)
++++.+.+.+||++..
T Consensus 207 ~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 207 LTAVAQLASEWFMHYL 222 (223)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7889999999998753
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-29 Score=179.69 Aligned_cols=183 Identities=14% Similarity=0.122 Sum_probs=140.4
Q ss_pred CCceEEEeCCCCCcc---cccHHH-HHHHhhc--cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEE
Q 024228 44 KKHAVVLLHPFGFDG---ILTWQF-QVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTL 116 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~---~~~~~~-~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l 116 (270)
++|+||++||++++. . .|.. +.+.|++ +|+|+++|+||++. ....+++..+++.++. ++++|
T Consensus 3 ~~p~vv~lHG~~~~~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~g~~~----------~~~~~~~~~~~~~l~~~~~~~l 71 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTH-GWYGWVKKELEKIPGFQCLAKNMPDPIT----------ARESIWLPFMETELHCDEKTII 71 (194)
T ss_dssp CCCEEEEECCSSSSCTTTS-TTHHHHHHHHTTSTTCCEEECCCSSTTT----------CCHHHHHHHHHHTSCCCTTEEE
T ss_pred CCCEEEEECCCCCCCcccc-hHHHHHHHHHhhccCceEEEeeCCCCCc----------ccHHHHHHHHHHHhCcCCCEEE
Confidence 468999999999984 5 6766 7888988 69999999998632 1356778888888888 89999
Q ss_pred EEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhh
Q 024228 117 VGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFV 196 (270)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (270)
+||||||.+++.+|.++| |+++|++++............ . ..+ .. ......
T Consensus 72 vG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~-~--------~~~-----------------~~-~~~~~~ 122 (194)
T 2qs9_A 72 IGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENERA-S--------GYF-----------------TR-PWQWEK 122 (194)
T ss_dssp EEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHHHH-T--------STT-----------------SS-CCCHHH
T ss_pred EEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhhHH-H--------hhh-----------------cc-cccHHH
Confidence 999999999999999998 999999998764321111000 0 000 00 001122
Q ss_pred hhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhccCC
Q 024228 197 YKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANGQH 269 (270)
Q Consensus 197 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~~~ 269 (270)
+....+|+++++|++|.++|.+.++.+.+.+ +.++++++++||+++.++|+.+.+.+ +||++.....+.+
T Consensus 123 ~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~~-~fl~~~~~~~~~~ 192 (194)
T 2qs9_A 123 IKANCPYIVQFGSTDDPFLPWKEQQEVADRL--ETKLHKFTDCGHFQNTEFHELITVVK-SLLKVPALEHHHH 192 (194)
T ss_dssp HHHHCSEEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTSCSSCCHHHHHHHH-HHHTCCCCCCCCC
T ss_pred HHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc--CCeEEEeCCCCCccchhCHHHHHHHH-HHHHhhhhhhhcc
Confidence 3334479999999999999999999999888 68999999999999999999887765 9998876654443
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=202.87 Aligned_cols=213 Identities=13% Similarity=0.069 Sum_probs=148.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEE
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~ 119 (270)
+++++||++||++++.. .|..+++.|++. |+|+++|+||||.|..+.. .+.+++++++.++++.+ .++++++||
T Consensus 34 ~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~l~~~~~~~-~~~~~lvGh 110 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW-EQVQGFREAVVPIMAKA-PQGVHLICY 110 (302)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH-HHHHHHHHHHHHHHHHC-TTCEEEEEE
T ss_pred CCCCeEEEECCCCCChh-HHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH-HHHHHHHHHHHHHhhcC-CCcEEEEEE
Confidence 45789999999999999 999999999885 9999999999999875432 56777888888888887 689999999
Q ss_pred chhHHHHHHHHhhCcc-ccccEEEecccCCCCchhhhHh---hhhcc--------chhh------hhhc-ccccHHHHHH
Q 024228 120 SYGGMVGFKMAEMYPD-LVESMVVTCSVMGLTESVSNAA---LERIG--------YESW------VDFL-LPKTADALKV 180 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~~~~~~~~~~~---~~~~~--------~~~~------~~~~-~~~~~~~~~~ 180 (270)
||||.+++.+|.++|+ +|+++|+++++........... ..... .... .... .+.....+..
T Consensus 111 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (302)
T 1pja_A 111 SQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLN 190 (302)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGBCCTTCHHHHHH
T ss_pred CHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhcccChhhhhhhhc
Confidence 9999999999999999 7999999998764322110000 00000 0000 0000 0111111100
Q ss_pred ---HHHhhhhcCCCC----hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-------------------------
Q 024228 181 ---QFDIACYKLPTL----PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG------------------------- 228 (270)
Q Consensus 181 ---~~~~~~~~~~~~----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------- 228 (270)
+........... ....+.++. |+++++|++|.++|++.++.+.+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (302)
T 1pja_A 191 ASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLA 269 (302)
T ss_dssp HCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHH
T ss_pred cchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhh
Confidence 000000000000 133455666 99999999999999887776643332
Q ss_pred -CCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 229 -QNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 229 -~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
+++++++++++||+++.|+|+++.+.|.+||
T Consensus 270 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 270 RGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp TTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred cCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 1389999999999999999999999999886
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-29 Score=187.70 Aligned_cols=233 Identities=11% Similarity=0.071 Sum_probs=153.7
Q ss_pred eEEEeecCCeEEEEEecCCC--CCCceEEEeCCCC---CcccccH-HHHHHHhhccceEEeecCCCCCCCCCCCCCCChH
Q 024228 23 QRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPFG---FDGILTW-QFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~---~~~~~~~-~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
...+...||.+++++...+. +++|+||++||++ ++.. .| ..+.+.|++.|.|+++|+||+|.+.. ....+
T Consensus 5 ~~~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~l~~~~~v~~~d~~~~~~~~~---~~~~~ 80 (275)
T 3h04_A 5 KYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKAN-DLSPQYIDILTEHYDLIQLSYRLLPEVSL---DCIIE 80 (275)
T ss_dssp EEEEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTT-CSCHHHHHHHTTTEEEEEECCCCTTTSCH---HHHHH
T ss_pred EEEEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchh-hhHHHHHHHHHhCceEEeeccccCCcccc---chhHH
Confidence 44566678999887655432 3678999999988 5555 44 47788888779999999999986642 12233
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh---hhhc---cchhhhhh-
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA---LERI---GYESWVDF- 169 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~- 169 (270)
+..+.+..+.+.++.++++|+||||||.+++.+|.+ ++++++|+++|............ .... ........
T Consensus 81 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T 3h04_A 81 DVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQL 158 (275)
T ss_dssp HHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTTSCHHHHHTT
T ss_pred HHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcccccchHHHHhcc
Confidence 344444445555677899999999999999999999 78999999999876532211100 0000 00000000
Q ss_pred ------cccccHHHHHHH--HHhh------hhc------CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC
Q 024228 170 ------LLPKTADALKVQ--FDIA------CYK------LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ 229 (270)
Q Consensus 170 ------~~~~~~~~~~~~--~~~~------~~~------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 229 (270)
............ .... ... ........+..+. |+|+++|++|.++|.+.++.+.+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~~~~~~~~- 236 (275)
T 3h04_A 159 TSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESEHIMNHVP- 236 (275)
T ss_dssp SCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHHHHHTTCS-
T ss_pred cCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHHHHHHhcC-
Confidence 000000000000 0000 000 0011122234454 99999999999999999999999987
Q ss_pred CceEEEecCCCcceeecch---HhHHHHHHHHHHhhh
Q 024228 230 NATMESIEKAGHLVNLERP---FVYNRQLKTILASLV 263 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~ 263 (270)
+.++++++++||.++.+.+ +++.+.+.+||++..
T Consensus 237 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 237 HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHh
Confidence 8899999999999998888 589999999998764
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-29 Score=197.60 Aligned_cols=242 Identities=16% Similarity=0.172 Sum_probs=158.5
Q ss_pred CceeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhcc-------ceEEeecCCCCCCCCCCC-
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKT-------YEVYVPDFLFFGSSVTDR- 90 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-------~~v~~~d~~g~G~s~~~~- 90 (270)
.+....+.+ +|.+++|...++. +++++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+.
T Consensus 84 ~~~~~~~~i-~g~~i~~~~~~~~~~~~~pllllHG~~~s~~-~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~ 161 (408)
T 3g02_A 84 SFPQFTTEI-EGLTIHFAALFSEREDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPL 161 (408)
T ss_dssp TSCEEEEEE-TTEEEEEEEECCSCTTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCS
T ss_pred cCCCEEEEE-CCEEEEEEEecCCCCCCCeEEEECCCCCcHH-HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCC
Confidence 445555666 8999999877643 45789999999999999 999999999873 799999999999999865
Q ss_pred -CCCChHHHHHHHHHHHHHhCCC-ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc------hhhh----Hhh
Q 024228 91 -PDRTASFQAECMAKGLRKLGVE-KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE------SVSN----AAL 158 (270)
Q Consensus 91 -~~~~~~~~~~~~~~~l~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~------~~~~----~~~ 158 (270)
..++.+.+++++.++++.++.+ +++++||||||.+++.+|.++|+ +.++++..+...... .... ...
T Consensus 162 ~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~-~~~~~l~~~~~~~~~~~~~~~~l~~~e~~~~~ 240 (408)
T 3g02_A 162 DKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDA-CKAVHLNFCNMSAPPEGPSIESLSAAEKEGIA 240 (408)
T ss_dssp SSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTT-EEEEEESCCCCCCCTTCCCGGGSCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCC-ceEEEEeCCCCCCCcccccccCCCHHHHHHHH
Confidence 5689999999999999999997 99999999999999999999976 444444433322110 0000 000
Q ss_pred hhccc---------------hhh-------------------hhhcc-cccHHHHHHHHH-----------hhhhcC--C
Q 024228 159 ERIGY---------------ESW-------------------VDFLL-PKTADALKVQFD-----------IACYKL--P 190 (270)
Q Consensus 159 ~~~~~---------------~~~-------------------~~~~~-~~~~~~~~~~~~-----------~~~~~~--~ 190 (270)
....+ ... ..+.. ......+..... ...+.. .
T Consensus 241 ~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~y~~t~~~~~s~~~y~e~~~ 320 (408)
T 3g02_A 241 RMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYREWVP 320 (408)
T ss_dssp HHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTHHHHHGGGHHHHTT
T ss_pred HHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHHHHhhccchhHHHHHHhhcc
Confidence 00000 000 00000 000000000000 000000 0
Q ss_pred CChh-------hhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 191 TLPA-------FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 191 ~~~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.... .....+.+|++++.|.+|...++....+ .......+.+++++||++++|+|+.+++.|.+||++..
T Consensus 321 ~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~~~~---~~~~~~~~~~~~~gGHf~~lE~Pe~~~~~l~~fl~~~~ 397 (408)
T 3g02_A 321 TASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRSWIA---TTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQVW 397 (408)
T ss_dssp C-------CTTTTTTCEEEEEEEEECTBSSSCCCHHHHG---GGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccCCCcCCCEEEEeCCcccccCcHHHHH---hcCCeeEEEECCCCcCchhhhCHHHHHHHHHHHHHHHH
Confidence 0000 0233456999999999997766543222 22325678899999999999999999999999999876
Q ss_pred hhcc
Q 024228 264 HANG 267 (270)
Q Consensus 264 ~~~~ 267 (270)
....
T Consensus 398 ~~~~ 401 (408)
T 3g02_A 398 QKGR 401 (408)
T ss_dssp ----
T ss_pred HcCc
Confidence 5433
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=182.74 Aligned_cols=197 Identities=17% Similarity=0.099 Sum_probs=156.3
Q ss_pred eEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC----------
Q 024228 23 QRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR---------- 90 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~---------- 90 (270)
...+.+.+|.++.++...+. .+.|+||++||++++.. .|..+++.|++. |.|+++|+||+|.|....
T Consensus 5 ~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 83 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQ 83 (236)
T ss_dssp TCCEECTTSCEECEEEECCSSCSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHH
T ss_pred eEEEecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCH-HHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhh
Confidence 34566678988876655443 45688999999999998 999999999986 999999999999886432
Q ss_pred -----CCCChHHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh
Q 024228 91 -----PDRTASFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 91 -----~~~~~~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
...+.+...+|+.++++.+. .++++++|||+||.+++.++.++| +++++.+.+.....
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~---------- 151 (236)
T 1zi8_A 84 AYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLEK---------- 151 (236)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGGG----------
T ss_pred hhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCccccc----------
Confidence 12356677889999999886 468999999999999999999998 99988887643210
Q ss_pred ccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc--CCceEEEecC
Q 024228 161 IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG--QNATMESIEK 238 (270)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 238 (270)
....+..+.+|+++++|++|.++|.+..+.+.+.+. ++.+++++++
T Consensus 152 --------------------------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (236)
T 1zi8_A 152 --------------------------------QLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEE 199 (236)
T ss_dssp --------------------------------CGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETT
T ss_pred --------------------------------chhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECC
Confidence 011233344899999999999999999999999884 2789999999
Q ss_pred CCcceeecch--------HhHHHHHHHHHHhhhh
Q 024228 239 AGHLVNLERP--------FVYNRQLKTILASLVH 264 (270)
Q Consensus 239 ~gH~~~~~~~--------~~~~~~i~~fl~~~~~ 264 (270)
++|.+..+.+ +++.+.+.+||++...
T Consensus 200 ~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 200 AGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp CCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 9998876543 4688999999987654
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-29 Score=176.61 Aligned_cols=169 Identities=12% Similarity=0.095 Sum_probs=141.5
Q ss_pred CCceEEEeCCCCCcccccHH--HHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQ--FQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~ 119 (270)
++|+||++||++++.. .|. .+.+.|.+. |.|+++|+||+|.|.......+..+.++++.+.++... .++++++||
T Consensus 3 ~~~~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 81 (176)
T 2qjw_A 3 SRGHCILAHGFESGPD-ALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAATEKGPVVLAGS 81 (176)
T ss_dssp SSCEEEEECCTTCCTT-SHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCcEEEEEeCCCCCcc-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 5789999999998877 665 788889887 99999999999999865555677777888877777664 579999999
Q ss_pred chhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhh
Q 024228 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKH 199 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (270)
|+||.+++.++.++| ++++|+++|......... ...
T Consensus 82 S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~~------------------------------------------~~~ 117 (176)
T 2qjw_A 82 SLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLPA------------------------------------------LDA 117 (176)
T ss_dssp THHHHHHHHHHTTSC--CSEEEEESCCSCBTTBCC------------------------------------------CCC
T ss_pred CHHHHHHHHHHHhcC--hhheEEECCcCCccccCc------------------------------------------ccc
Confidence 999999999999998 999999998765421000 222
Q ss_pred hheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 200 ILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 200 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
..+|+++++|++|.++|.+..+.+.+.+ +.+++++ ++||.. .+.++++.+.|.+||++
T Consensus 118 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~-~~~H~~-~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 118 AAVPISIVHAWHDELIPAADVIAWAQAR--SARLLLV-DDGHRL-GAHVQAASRAFAELLQS 175 (176)
T ss_dssp CSSCEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEE-SSCTTC-TTCHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEcCCCCccCHHHHHHHHHhC--CceEEEe-CCCccc-cccHHHHHHHHHHHHHh
Confidence 3389999999999999999999999887 6888999 899998 48889999999999975
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-29 Score=192.84 Aligned_cols=188 Identities=18% Similarity=0.233 Sum_probs=148.3
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHH-------HHHHHhhcc-ceEEeecCCCCCCCCCCCCCCC--------
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQ-------FQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT-------- 94 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-------~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~-------- 94 (270)
...+.|+.+.. ..+++||++||++.+.. .|. .+++.|.+. |.|+++|+||||.|.......+
T Consensus 49 ~~~~~~~~p~~-~~~~~vvl~HG~g~~~~-~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~ 126 (328)
T 1qlw_A 49 QMYVRYQIPQR-AKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAP 126 (328)
T ss_dssp CEEEEEEEETT-CCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSC
T ss_pred eEEEEEEccCC-CCCccEEEEeCCCCCCC-ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccC
Confidence 34455666654 34688999999999888 888 488888877 9999999999999986532100
Q ss_pred --------------------------------------hHH------------------HHHHHHHHHHHhCCCceEEEE
Q 024228 95 --------------------------------------ASF------------------QAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 95 --------------------------------------~~~------------------~~~~~~~~l~~~~~~~~~l~G 118 (270)
.++ +.+++.++++.++ +++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvG 204 (328)
T 1qlw_A 127 ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLS 204 (328)
T ss_dssp GGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEE
T ss_pred cccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEE
Confidence 333 6778888888885 999999
Q ss_pred EchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhh
Q 024228 119 VSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYK 198 (270)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (270)
||+||.+++.+|.++|++|+++|+++|..... ......
T Consensus 205 hS~GG~~a~~~a~~~p~~v~~~v~~~p~~~~~------------------------------------------~~~~~~ 242 (328)
T 1qlw_A 205 HSQSGIYPFQTAAMNPKGITAIVSVEPGECPK------------------------------------------PEDVKP 242 (328)
T ss_dssp EGGGTTHHHHHHHHCCTTEEEEEEESCSCCCC------------------------------------------GGGCGG
T ss_pred ECcccHHHHHHHHhChhheeEEEEeCCCCCCC------------------------------------------HHHHhh
Confidence 99999999999999999999999999754100 000111
Q ss_pred hhheeeeEEEcCCCccCCH-----HHHHHHHHHhc---CCceEEEecCCC-----cceeecc-hHhHHHHHHHHHHhhhh
Q 024228 199 HILEKIHLLWGENDKIFDM-----QVARNLKEQVG---QNATMESIEKAG-----HLVNLER-PFVYNRQLKTILASLVH 264 (270)
Q Consensus 199 ~~~~P~l~i~g~~D~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~g-----H~~~~~~-~~~~~~~i~~fl~~~~~ 264 (270)
...+|+|+++|++|..+|. +.++.+.+.++ .++++++++++| |+.+.+. ++++.+.|.+||++...
T Consensus 243 ~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 243 LTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA 322 (328)
T ss_dssp GTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC
T ss_pred ccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhccc
Confidence 1238999999999999996 88888888876 378999999665 9999987 99999999999987654
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-28 Score=193.88 Aligned_cols=241 Identities=11% Similarity=0.109 Sum_probs=158.5
Q ss_pred CceeEEEeecCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHHH--HHhhccceEEeecCCCCCCCCCCCCCCChH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQV--LALAKTYEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~--~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
..+...++. +|..+..+.... .++.|+||++||++++.. .|.... ..+.++|.|+++|+||+|.|.........
T Consensus 134 ~~~~~~i~~-~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~- 210 (405)
T 3fnb_A 134 PLKSIEVPF-EGELLPGYAIISEDKAQDTLIVVGGGDTSRE-DLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEV- 210 (405)
T ss_dssp CCEEEEEEE-TTEEEEEEEECCSSSCCCEEEEECCSSCCHH-HHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCCS-
T ss_pred CcEEEEEeE-CCeEEEEEEEcCCCCCCCEEEEECCCCCCHH-HHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCCc-
Confidence 456666777 577776433333 234589999999999888 776554 44555599999999999999644333333
Q ss_pred HHHHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchh-hhhh---c
Q 024228 97 FQAECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES-WVDF---L 170 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~ 170 (270)
++.+|+.++++.+.. ++++|+|||+||.+++.+|..+| +|+++|+++|.................... .... .
T Consensus 211 ~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 289 (405)
T 3fnb_A 211 DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGSKL 289 (405)
T ss_dssp CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC----------------
T ss_pred cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHHHHHHHH
Confidence 457888888888876 79999999999999999999999 899999999887643222111100000000 0000 0
Q ss_pred ccccHHHHHHHHHhhh--hcCCC-----------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 171 LPKTADALKVQFDIAC--YKLPT-----------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~--~~~~~-----------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
...........+.... ..... .....+.++.+|+|+++|++|.++|++.++.+.+.++ .+.+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~ 369 (405)
T 3fnb_A 290 VTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLR 369 (405)
T ss_dssp --CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCceEE
Confidence 0000000000000000 00000 0000145556999999999999999999999999885 356799
Q ss_pred Ee---cCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 235 SI---EKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 235 ~~---~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
++ ++++|....++++.+.+.|.+||++...
T Consensus 370 ~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 370 KFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp EECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred EEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 99 6667778889999999999999998764
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=192.75 Aligned_cols=230 Identities=14% Similarity=0.118 Sum_probs=155.2
Q ss_pred eEEEeecCCeEEEEEec--CCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC--------
Q 024228 23 QRTIEIEPGTILNIWVP--KKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD-------- 92 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~--~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~-------- 92 (270)
...+...+|.+++++.. ...++.|+||++||++++.. .|..+...+..+|.|+++|+||+|.|......
T Consensus 84 ~~~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~-~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~ 162 (346)
T 3fcy_A 84 DLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSG-DWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNG 162 (346)
T ss_dssp EEEEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSC-CSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBC
T ss_pred EEEEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCC-ChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCc
Confidence 34445557888877554 33355789999999999998 88888877766699999999999988765321
Q ss_pred ------------CChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh
Q 024228 93 ------------RTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154 (270)
Q Consensus 93 ------------~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~ 154 (270)
+......+|+.++++.+ +.++++++|||+||.+++.+|..+|+ |+++|+++|.........
T Consensus 163 ~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~~~ 241 (346)
T 3fcy_A 163 HIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKRVW 241 (346)
T ss_dssp SSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHHHH
T ss_pred ceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHHHh
Confidence 22334566776666654 34689999999999999999999998 999999988654211110
Q ss_pred hHhhhhccchhhhhh---cccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCc
Q 024228 155 NAALERIGYESWVDF---LLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNA 231 (270)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 231 (270)
............... ..+.. ........... .........++.+|+|+++|++|.++|++.+..+.+.++.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 317 (346)
T 3fcy_A 242 DLDLAKNAYQEITDYFRLFDPRH-ERENEVFTKLG---YIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKK 317 (346)
T ss_dssp HTTCCCGGGHHHHHHHHHHCTTC-TTHHHHHHHHG---GGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSE
T ss_pred hccccccchHHHHHHHHhcCCCc-chHHHHHHHhC---cccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCc
Confidence 000000000000000 00000 00011111110 111233445556899999999999999999999998887678
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++++++++||..+ +++.+.+.+||+++
T Consensus 318 ~~~~~~~~gH~~~----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 318 DIKVYPDYGHEPM----RGFGDLAMQFMLEL 344 (346)
T ss_dssp EEEEETTCCSSCC----TTHHHHHHHHHHTT
T ss_pred EEEEeCCCCCcCH----HHHHHHHHHHHHHh
Confidence 9999999999997 56788999999875
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=197.92 Aligned_cols=226 Identities=16% Similarity=0.086 Sum_probs=150.3
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHH----------------HHHHHhhcc-ceEEeecCCCCCCCCCCCC-
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQ----------------FQVLALAKT-YEVYVPDFLFFGSSVTDRP- 91 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~----------------~~~~~l~~~-~~v~~~d~~g~G~s~~~~~- 91 (270)
+|..+.+..... +++|+||++||++++.. .|. .+++.|++. |+|+++|+||+|.|.....
T Consensus 36 ~~~~~~~~~~~~-~~~~~vv~~hG~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 113 (354)
T 2rau_A 36 DIISLHKVNLIG-GGNDAVLILPGTWSSGE-QLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDR 113 (354)
T ss_dssp CEEEEEEEEETT-CCEEEEEEECCTTCCHH-HHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGG
T ss_pred CceEEEeecccC-CCCCEEEEECCCCCCcc-ccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccc
Confidence 566777766543 35789999999999887 666 788999887 9999999999999986553
Q ss_pred ------CCChHHHHHHHHHHHHH----hCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCchhh------
Q 024228 92 ------DRTASFQAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVS------ 154 (270)
Q Consensus 92 ------~~~~~~~~~~~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~~~------ 154 (270)
.++.+.+++|+.++++. ++.++++++|||+||.+++.+|.++ |++|+++|++++.+.......
T Consensus 114 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 193 (354)
T 2rau_A 114 QLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPE 193 (354)
T ss_dssp GGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCS
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhh
Confidence 57788899999998887 4788999999999999999999999 999999999976543210000
Q ss_pred ----hHhhhhc--------cc-h-----hhhhhccc---ccHHHHHHHHHhhhh---cC---------------------
Q 024228 155 ----NAALERI--------GY-E-----SWVDFLLP---KTADALKVQFDIACY---KL--------------------- 189 (270)
Q Consensus 155 ----~~~~~~~--------~~-~-----~~~~~~~~---~~~~~~~~~~~~~~~---~~--------------------- 189 (270)
....... .. . .......+ .........+....+ ..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (354)
T 2rau_A 194 VNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFD 273 (354)
T ss_dssp CSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSC
T ss_pred hhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhc
Confidence 0000000 00 0 00000000 000000011100000 00
Q ss_pred ---------CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch---HhHHHHHHH
Q 024228 190 ---------PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP---FVYNRQLKT 257 (270)
Q Consensus 190 ---------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~ 257 (270)
.......+.++.+|+|+++|++|.++|. .++ .+.+++++++++++||.++++++ +++++.|.+
T Consensus 274 ~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~~----~l~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~ 348 (354)
T 2rau_A 274 PYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF-DSK----ILPSNSEIILLKGYGHLDVYTGENSEKDVNSVVLK 348 (354)
T ss_dssp SEEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHB-CGG----GSCTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHH
T ss_pred cccccccccCcccccccccCCCCEEEEecCCCCCCcc-chh----hhccCceEEEcCCCCCchhhcCCCcHHHHHHHHHH
Confidence 0001112335569999999999987653 222 22248899999999999987664 899999999
Q ss_pred HHHhh
Q 024228 258 ILASL 262 (270)
Q Consensus 258 fl~~~ 262 (270)
||+++
T Consensus 349 fl~~~ 353 (354)
T 2rau_A 349 WLSQQ 353 (354)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99865
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-29 Score=177.18 Aligned_cols=169 Identities=20% Similarity=0.181 Sum_probs=139.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-c---eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-Y---EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~---~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~ 119 (270)
++|+||++||++++.. .|..+++.|.+. | +|+++|+||+|.|.. .+.+++++++.++++.++.++++++||
T Consensus 2 ~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~~~~~~~lvG~ 76 (181)
T 1isp_A 2 EHNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY----NNGPVLSRFVQKVLDETGAKKVDIVAH 76 (181)
T ss_dssp CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH----HHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEECCcCCCHh-HHHHHHHHHHHcCCCCccEEEEecCCCCCchh----hhHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 4689999999999998 999999999887 6 799999999998753 466788999999999999999999999
Q ss_pred chhHHHHHHHHhhC--ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhh
Q 024228 120 SYGGMVGFKMAEMY--PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVY 197 (270)
Q Consensus 120 S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (270)
||||.+++.++.++ |++++++|++++........ . .+. ..
T Consensus 77 S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~---------------~-~~~-----------------~~----- 118 (181)
T 1isp_A 77 SMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---------------A-LPG-----------------TD----- 118 (181)
T ss_dssp THHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB---------------C-CCC-----------------SC-----
T ss_pred CccHHHHHHHHHhcCCCceEEEEEEEcCcccccccc---------------c-CCC-----------------CC-----
Confidence 99999999999998 88999999999875422100 0 000 00
Q ss_pred hhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 198 KHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 198 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
....+|+++++|++|.++|++.+ .++ +.++++++++||..+.+++ ++.+.|.+||++.
T Consensus 119 ~~~~~p~l~i~G~~D~~v~~~~~-----~~~-~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 119 PNQKILYTSIYSSADMIVMNYLS-----RLD-GARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGG 176 (181)
T ss_dssp TTCCCEEEEEEETTCSSSCHHHH-----CCB-TSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTT
T ss_pred CccCCcEEEEecCCCcccccccc-----cCC-CCcceeeccCchHhhccCH-HHHHHHHHHHhcc
Confidence 00127999999999999998743 255 8899999999999998887 6999999999764
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-27 Score=189.42 Aligned_cols=232 Identities=13% Similarity=0.053 Sum_probs=164.3
Q ss_pred CceeEEEeecCCeEEEEEecCCC--CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCC-CCCCCCCCh
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSS-VTDRPDRTA 95 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s-~~~~~~~~~ 95 (270)
.++...++. +|.++.++...+. ++.|+||++||++++.. .|......|.++ |.|+++|+||+|.| .......+.
T Consensus 126 ~~~~v~~~~-dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~~~ 203 (386)
T 2jbw_A 126 PAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDY 203 (386)
T ss_dssp CEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCH
T ss_pred CeEEEEEEe-CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHH-HHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCccH
Confidence 566667777 8999877654332 45689999999998887 665567777766 99999999999998 333345777
Q ss_pred HHHHHHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccc
Q 024228 96 SFQAECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (270)
Q Consensus 96 ~~~~~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (270)
.+.+.++.+++.. ++.++++++|||+||.+++.++.+ |++++++|++ +......... ................
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~--~~~~~~~~~~~~~~g~ 279 (386)
T 2jbw_A 204 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD--LETPLTKESWKYVSKV 279 (386)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG--GSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH--hccHHHHHHHHHHhCC
Confidence 7788888888888 566799999999999999999999 8899999999 7665432211 0000000000000111
Q ss_pred ccHHHHH-HHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHh-cCCceEEEecCCCcceeecchHh
Q 024228 173 KTADALK-VQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQV-GQNATMESIEKAGHLVNLERPFV 250 (270)
Q Consensus 173 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~ 250 (270)
....... ..+.. + .+...+.++.+|+|+++|++|. ++++.++.+.+.+ +.+.++++++++||.. .+++++
T Consensus 280 ~~~~~~~~~~~~~--~----~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~ 351 (386)
T 2jbw_A 280 DTLEEARLHVHAA--L----ETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIR 351 (386)
T ss_dssp SSHHHHHHHHHHH--T----CCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTH
T ss_pred CCHHHHHHHHHHh--C----ChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHH
Confidence 1111111 11111 1 1122345556999999999999 9999999999998 5478999999999965 678888
Q ss_pred HHHHHHHHHHhhhhh
Q 024228 251 YNRQLKTILASLVHA 265 (270)
Q Consensus 251 ~~~~i~~fl~~~~~~ 265 (270)
+.+.|.+||++....
T Consensus 352 ~~~~i~~fl~~~l~~ 366 (386)
T 2jbw_A 352 PRLEMADWLYDVLVA 366 (386)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999987643
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=176.30 Aligned_cols=196 Identities=15% Similarity=0.163 Sum_probs=150.3
Q ss_pred CceeEEEeecCCeEEEE--EecCCC--CCCceEEEeCCCC---Cccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNI--WVPKKT--TKKHAVVLLHPFG---FDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR 90 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~--~~~~~~--~~~~~vv~~hG~~---~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~ 90 (270)
..+...+...+| .+.+ +.+... .++|+||++||++ +... ..|..+++.|++. |.|+++|+||+|.|....
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 87 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSF 87 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCC
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCc
Confidence 456677778777 5544 444443 3478999999953 2222 2578889999887 999999999999998654
Q ss_pred CCCChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhh
Q 024228 91 PDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (270)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
. ......+|+.++++.+ +.++++++|||+||.+++.++.++ +++++|++++......
T Consensus 88 ~--~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------- 148 (220)
T 2fuk_A 88 D--HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------- 148 (220)
T ss_dssp C--TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------
T ss_pred c--cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------
Confidence 2 2345567777666655 445899999999999999999987 7999999998765422
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
+... . ...|+++++|++|.++|.+.++.+.+.+.++.+++++++++|.+..
T Consensus 149 --------------------~~~~-------~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~- 199 (220)
T 2fuk_A 149 --------------------FSDV-------Q-PPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFHR- 199 (220)
T ss_dssp --------------------CTTC-------C-CCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-
T ss_pred --------------------hhhc-------c-cCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCceehh-
Confidence 0000 0 0278999999999999999999999988448999999999999877
Q ss_pred chHhHHHHHHHHHHhhhh
Q 024228 247 RPFVYNRQLKTILASLVH 264 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~~~~ 264 (270)
.++++.+.+.+|+++...
T Consensus 200 ~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 200 KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp CHHHHHHHHHHHHGGGCS
T ss_pred hHHHHHHHHHHHHHHHhh
Confidence 578899999999987653
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=188.86 Aligned_cols=184 Identities=11% Similarity=0.070 Sum_probs=142.6
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH-
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR- 107 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~- 107 (270)
+|..++|.......++|+||++||++++.. .|..+++.|++. |.|+++|+||+|.+... ...++ .+..+.+.
T Consensus 39 ~~~~l~~p~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~----~~~d~-~~~~~~l~~ 112 (262)
T 1jfr_A 39 GGGTIYYPTSTADGTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQPDS----RGRQL-LSALDYLTQ 112 (262)
T ss_dssp CCEEEEEESCCTTCCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCHHH----HHHHH-HHHHHHHHH
T ss_pred CceeEEecCCCCCCCCCEEEEeCCcCCCch-hHHHHHHHHHhCCCEEEEeCCCCCCCCCch----hHHHH-HHHHHHHHh
Confidence 346777655433355789999999999998 999999999887 99999999999976421 11111 11222222
Q ss_pred ------HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHH
Q 024228 108 ------KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQ 181 (270)
Q Consensus 108 ------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (270)
.++.++++++|||+||.+++.++.++|+ ++++|++++...
T Consensus 113 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~--------------------------------- 158 (262)
T 1jfr_A 113 RSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT--------------------------------- 158 (262)
T ss_dssp TSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---------------------------------
T ss_pred ccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc---------------------------------
Confidence 3455689999999999999999999997 999999987532
Q ss_pred HHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHHHHHhcC--CceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 182 FDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNLKEQVGQ--NATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
...+..+.+|+++++|++|.+++.+. .+.+.+.++. +.++++++++||..+.+.++++.+.+.+|
T Consensus 159 ------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~f 226 (262)
T 1jfr_A 159 ------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISW 226 (262)
T ss_dssp ------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHH
T ss_pred ------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHH
Confidence 00122233899999999999999998 9999998862 35899999999999999999999999999
Q ss_pred HHhhhhh
Q 024228 259 LASLVHA 265 (270)
Q Consensus 259 l~~~~~~ 265 (270)
|++....
T Consensus 227 l~~~l~~ 233 (262)
T 1jfr_A 227 LKRFIDS 233 (262)
T ss_dssp HHHHHSC
T ss_pred HHHHhcC
Confidence 9987643
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-28 Score=187.96 Aligned_cols=217 Identities=12% Similarity=0.045 Sum_probs=135.5
Q ss_pred eEEEEEecC-CCCCCceEEEeCCCCCccc--ccHHHHHHHhhccceEEee----cCCCCCCCCCCCCCCChHHHHHHHHH
Q 024228 32 TILNIWVPK-KTTKKHAVVLLHPFGFDGI--LTWQFQVLALAKTYEVYVP----DFLFFGSSVTDRPDRTASFQAECMAK 104 (270)
Q Consensus 32 ~~l~~~~~~-~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~~~v~~~----d~~g~G~s~~~~~~~~~~~~~~~~~~ 104 (270)
..++|...+ ...++|+|||+||++++.. ..|..+++.|.++|+|+++ |+||||.|+. ...++|+.+
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~-------~~~~~d~~~ 96 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDH-------AHDAEDVDD 96 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCH-------HHHHHHHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCccc-------cCcHHHHHH
Confidence 567776555 3345689999999987544 2467888889666999999 5699999862 334555555
Q ss_pred HHHH----hCCCceEEEEEchhHHHHHHHHh--hCccccccEEEecccCCCCchh-h----hHh---hhhcc----chhh
Q 024228 105 GLRK----LGVEKCTLVGVSYGGMVGFKMAE--MYPDLVESMVVTCSVMGLTESV-S----NAA---LERIG----YESW 166 (270)
Q Consensus 105 ~l~~----~~~~~~~l~G~S~Gg~~a~~~a~--~~p~~v~~~i~~~~~~~~~~~~-~----~~~---~~~~~----~~~~ 166 (270)
+++. ++.++++|+||||||.+|+.+|. .+|++|+++|++++........ . ... ..... ....
T Consensus 97 ~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (335)
T 2q0x_A 97 LIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDS 176 (335)
T ss_dssp HHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTCG
T ss_pred HHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccCcccc
Confidence 5543 68889999999999999999999 5799999999999865322100 0 000 00000 0000
Q ss_pred h---hhcc-cccHHHHH---------HHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-----HHHHHHHhc
Q 024228 167 V---DFLL-PKTADALK---------VQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-----ARNLKEQVG 228 (270)
Q Consensus 167 ~---~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~ 228 (270)
. .... +.....+. ..+..............+.++.+|+|+|+|++|.++|++. .+.+.+.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~ 256 (335)
T 2q0x_A 177 LAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTG 256 (335)
T ss_dssp GGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSS
T ss_pred ccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcC
Confidence 0 0000 00000000 0000000000000112345566999999999999999753 466677776
Q ss_pred CCce--------E-----EEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 229 QNAT--------M-----ESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 229 ~~~~--------~-----~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
+.+ + ++++++|| ++++.|.+||++...
T Consensus 257 -~~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~~~~~ 296 (335)
T 2q0x_A 257 -CNRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLADEDE 296 (335)
T ss_dssp -SSCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHHHHHH
T ss_pred -ccccccccccchhhhhhcccCCCCC--------HHHHHHHHHHHhhhh
Confidence 666 6 89999999 348889999987654
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-29 Score=183.53 Aligned_cols=193 Identities=16% Similarity=0.133 Sum_probs=144.9
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEee--cCCCCCCCCCCC----CCC
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVP--DFLFFGSSVTDR----PDR 93 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~--d~~g~G~s~~~~----~~~ 93 (270)
..++.+++. +|..++|+.++..+++|+||++||++++.. .|..+++.|++.|.|+++ |++|+|.|.... ...
T Consensus 14 ~~~e~~~~~-~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~~~~ 91 (226)
T 2h1i_A 14 GTENLYFQS-NAMMKHVFQKGKDTSKPVLLLLHGTGGNEL-DLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIF 91 (226)
T ss_dssp -CCCHHHHH-HSSSCEEEECCSCTTSCEEEEECCTTCCTT-TTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEE
T ss_pred cceeeeecC-CCceeEEecCCCCCCCcEEEEEecCCCChh-HHHHHHHHhccCceEEEecCcccCCcchhhccccCccCc
Confidence 344445555 688888888876556899999999999998 999999999988999999 999999875322 223
Q ss_pred ChHHHHHH---HHHHH----HHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 94 TASFQAEC---MAKGL----RKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 94 ~~~~~~~~---~~~~l----~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
+...+.++ +.+++ +.. +.++++++|||+||.+++.++.++|++++++|+++|.......
T Consensus 92 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------ 159 (226)
T 2h1i_A 92 DEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM------------ 159 (226)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC------------
T ss_pred ChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCcc------------
Confidence 44544444 33344 333 4579999999999999999999999999999999987653210
Q ss_pred hhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCc
Q 024228 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGH 241 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH 241 (270)
. ......+|+++++|++|.+++.+..+.+.+.++. ..++ +++++||
T Consensus 160 -----------------------~-------~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH 208 (226)
T 2h1i_A 160 -----------------------Q-------LANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGH 208 (226)
T ss_dssp -----------------------C-------CCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTT
T ss_pred -----------------------c-------cccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCC
Confidence 0 0011128999999999999999999999988862 3445 8999999
Q ss_pred ceeecchHhHHHHHHHHHHh
Q 024228 242 LVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl~~ 261 (270)
....+ ..+.+.+||++
T Consensus 209 ~~~~~----~~~~~~~~l~~ 224 (226)
T 2h1i_A 209 QLTMG----EVEKAKEWYDK 224 (226)
T ss_dssp SCCHH----HHHHHHHHHHH
T ss_pred CCCHH----HHHHHHHHHHH
Confidence 98543 44566667654
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-27 Score=171.32 Aligned_cols=179 Identities=11% Similarity=0.136 Sum_probs=136.1
Q ss_pred CceEEEeCCCCCcccccHHHHH-HHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchh
Q 024228 45 KHAVVLLHPFGFDGILTWQFQV-LALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~-~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~G 122 (270)
.|+||++||++++....|.... ..|.+. |.|+++|+| .+.. .+.+++++++.++++.+ .++++++|||+|
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~----~~~~~~~~~~~~~~~~~-~~~~~l~G~S~G 75 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQ----PRLEDWLDTLSLYQHTL-HENTYLVAHSLG 75 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTS----CCHHHHHHHHHTTGGGC-CTTEEEEEETTH
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCC----CCHHHHHHHHHHHHHhc-cCCEEEEEeCcc
Confidence 4669999999988763476666 468554 999999999 2221 26889999999999988 789999999999
Q ss_pred HHHHHHHHhhCcc--ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhh
Q 024228 123 GMVGFKMAEMYPD--LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200 (270)
Q Consensus 123 g~~a~~~a~~~p~--~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (270)
|.+++.+|.++|+ +++++|++++.......... ... +. ........+.++
T Consensus 76 g~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~----------~~~-~~-----------------~~~~~~~~~~~~ 127 (192)
T 1uxo_A 76 CPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM----------LDE-FT-----------------QGSFDHQKIIES 127 (192)
T ss_dssp HHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG----------GGG-GT-----------------CSCCCHHHHHHH
T ss_pred HHHHHHHHHHhcccCCccEEEEeccCCCccccchh----------hhh-hh-----------------hcCCCHHHHHhh
Confidence 9999999999999 99999999987653221100 000 00 001111334455
Q ss_pred heeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHh---HHHHHHHHHHh
Q 024228 201 LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV---YNRQLKTILAS 261 (270)
Q Consensus 201 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~---~~~~i~~fl~~ 261 (270)
.+|+++++|++|.++|.+.++.+.+.+ +.++++++++||..+.+++++ +.+.|.+|+++
T Consensus 128 ~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 128 AKHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp EEEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred cCCEEEEecCCCCcCCHHHHHHHHHhc--CceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 589999999999999999999999888 789999999999999888754 45666666653
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=181.34 Aligned_cols=222 Identities=12% Similarity=0.080 Sum_probs=154.5
Q ss_pred ceeEEEeecCCeEEEEEecCCC-----CCCceEEEeCCCC---CcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC
Q 024228 21 MTQRTIEIEPGTILNIWVPKKT-----TKKHAVVLLHPFG---FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP 91 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~ 91 (270)
+....+...+|..+.++.+.+. .+.|+||++||++ ++.. .|..++..|++. |.|+++|+||+|.|...
T Consensus 14 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~-- 90 (276)
T 3hxk_A 14 MNKSTFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQR-ESDPLALAFLAQGYQVLLLNYTVMNKGTNY-- 90 (276)
T ss_dssp -CEEECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGG-GSHHHHHHHHHTTCEEEEEECCCTTSCCCS--
T ss_pred cccccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCch-hhHHHHHHHHHCCCEEEEecCccCCCcCCC--
Confidence 3445566668999988877653 4569999999944 4445 788888899877 99999999999987632
Q ss_pred CCChHHHHHHHHHHHHHh---------CCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCchhhhHhhhhc
Q 024228 92 DRTASFQAECMAKGLRKL---------GVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTESVSNAALERI 161 (270)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~---------~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~~~~~~~~~~~ 161 (270)
.......+|+.++++.+ +.++++|+|||+||.+++.++.+ .+.+++++|+++|........... .
T Consensus 91 -~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~----~ 165 (276)
T 3hxk_A 91 -NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSD----L 165 (276)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSS----S
T ss_pred -CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcc----h
Confidence 23444555555544433 34689999999999999999998 788999999999876543221000 0
Q ss_pred cchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecC
Q 024228 162 GYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEK 238 (270)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~ 238 (270)
.....+ .... ....+........+|+++++|++|.++|.+.++.+.+.+. .+++++++++
T Consensus 166 ---~~~~~~-~~~~-------------~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~ 228 (276)
T 3hxk_A 166 ---SHFNFE-IENI-------------SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFES 228 (276)
T ss_dssp ---SSSCCC-CSCC-------------GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESC
T ss_pred ---hhhhcC-chhh-------------hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECC
Confidence 000000 0000 0001111223344899999999999999999999988875 2458999999
Q ss_pred CCcceeecch-------------HhHHHHHHHHHHhhhhhcc
Q 024228 239 AGHLVNLERP-------------FVYNRQLKTILASLVHANG 267 (270)
Q Consensus 239 ~gH~~~~~~~-------------~~~~~~i~~fl~~~~~~~~ 267 (270)
++|.+....+ +++.+.+.+||++......
T Consensus 229 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~ 270 (276)
T 3hxk_A 229 GPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNLE 270 (276)
T ss_dssp CCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC
T ss_pred CCCCccccCccccccccccCchHHHHHHHHHHHHHhCccccc
Confidence 9998876444 6788899999998775433
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=180.40 Aligned_cols=186 Identities=18% Similarity=0.212 Sum_probs=141.6
Q ss_pred EEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEee-------------------cCCCCCCCCCCCCCCCh
Q 024228 36 IWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVP-------------------DFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 36 ~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~-------------------d~~g~G~s~~~~~~~~~ 95 (270)
++.+...+++|+||++||++++.. .|..+++.|++. |.|+++ |++|+ .+.......+.
T Consensus 14 ~~~p~~~~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~~~ 91 (232)
T 1fj2_A 14 AIVPAARKATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDESGI 91 (232)
T ss_dssp EEECCSSCCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHHHH
T ss_pred cccCCCCCCCceEEEEecCCCccc-hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-CcccccccHHH
Confidence 344444456899999999999998 999999999875 999998 66666 33323333567
Q ss_pred HHHHHHHHHHHHHh---CC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhc
Q 024228 96 SFQAECMAKGLRKL---GV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL 170 (270)
Q Consensus 96 ~~~~~~~~~~l~~~---~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (270)
+..++++.++++.+ +. ++++++|||+||.+++.++.++|++++++|++++.........
T Consensus 92 ~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~---------------- 155 (232)
T 1fj2_A 92 KQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP---------------- 155 (232)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC----------------
T ss_pred HHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcccc----------------
Confidence 78889999999886 54 7999999999999999999999999999999998765321110
Q ss_pred ccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-----CCceEEEecCCCcceee
Q 024228 171 LPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-----QNATMESIEKAGHLVNL 245 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~ 245 (270)
. .........+|+++++|++|.+++.+.++.+.+.+. ++.+++++++++|....
T Consensus 156 --~-------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~ 214 (232)
T 1fj2_A 156 --Q-------------------GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ 214 (232)
T ss_dssp --S-------------------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH
T ss_pred --c-------------------cccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCH
Confidence 0 000122334899999999999999998888887773 25899999999999844
Q ss_pred cchHhHHHHHHHHHHhhhh
Q 024228 246 ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 246 ~~~~~~~~~i~~fl~~~~~ 264 (270)
+. .+.+.+||++...
T Consensus 215 ~~----~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 215 QE----MMDVKQFIDKLLP 229 (232)
T ss_dssp HH----HHHHHHHHHHHSC
T ss_pred HH----HHHHHHHHHHhcC
Confidence 33 3667777776543
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-27 Score=176.14 Aligned_cols=206 Identities=14% Similarity=0.147 Sum_probs=150.8
Q ss_pred CceeEEEeec-CCeEEEEEec--CCC-CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC--
Q 024228 20 GMTQRTIEIE-PGTILNIWVP--KKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-- 92 (270)
Q Consensus 20 ~~~~~~i~~~-~g~~l~~~~~--~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-- 92 (270)
+++.+.+.+. +|..+.++.. ... ++.|+||++||++++.. .|..+++.|++. |.|+++|+||+|.+......
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~ 81 (241)
T 3f67_A 3 AIIAGETSIPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHE-HIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIP 81 (241)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCH-HHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHH
T ss_pred cceeeeEEEecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCH-HHHHHHHHHHHCCcEEEEecccccCCCCCchhhHH
Confidence 3444444443 7888765443 322 34589999999999988 999999999877 99999999999877643322
Q ss_pred ---------CChHHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh
Q 024228 93 ---------RTASFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL 158 (270)
Q Consensus 93 ---------~~~~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~ 158 (270)
.+.+...+|+.++++.+. .++++++|||+||.+++.++.++|+ +.+++++.+........
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~----- 155 (241)
T 3f67_A 82 TLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSL----- 155 (241)
T ss_dssp HHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCS-----
T ss_pred HHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCcc-----
Confidence 234566888888888763 4579999999999999999999987 78877766553321100
Q ss_pred hhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEE
Q 024228 159 ERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMES 235 (270)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~ 235 (270)
.....+.....++.+|+++++|++|.++|.+..+.+.+.+. .+.++++
T Consensus 156 -----------------------------~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 206 (241)
T 3f67_A 156 -----------------------------NSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVV 206 (241)
T ss_dssp -----------------------------SSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred -----------------------------CCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 00011122234445899999999999999999999988873 3789999
Q ss_pred ecCCCcceee--------cchHhHHHHHHHHHHh
Q 024228 236 IEKAGHLVNL--------ERPFVYNRQLKTILAS 261 (270)
Q Consensus 236 ~~~~gH~~~~--------~~~~~~~~~i~~fl~~ 261 (270)
+++++|.+.. +..++..+.+.+||++
T Consensus 207 ~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 207 YPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp ETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999998863 2336678889999875
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-27 Score=169.65 Aligned_cols=168 Identities=10% Similarity=0.094 Sum_probs=134.6
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
++++||++||++++....|......+.. .++.+|+||++ ..+.+++++++.++++.++ ++++++|||+||
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 85 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWY-------QADLDRWVLAIRRELSVCT-QPVILIGHSFGA 85 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCS-------SCCHHHHHHHHHHHHHTCS-SCEEEEEETHHH
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCC-------CcCHHHHHHHHHHHHHhcC-CCeEEEEEChHH
Confidence 4789999999999883278776654433 44667888764 3578999999999999987 899999999999
Q ss_pred HHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK 203 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 203 (270)
.+++.+|.++|++++++|++++........ +.. .....+.+|
T Consensus 86 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~------------------~~~--------------------~~~~~~~~P 127 (191)
T 3bdv_A 86 LAACHVVQQGQEGIAGVMLVAPAEPMRFEI------------------DDR--------------------IQASPLSVP 127 (191)
T ss_dssp HHHHHHHHTTCSSEEEEEEESCCCGGGGTC------------------TTT--------------------SCSSCCSSC
T ss_pred HHHHHHHHhcCCCccEEEEECCCccccccC------------------ccc--------------------cccccCCCC
Confidence 999999999999999999999876532110 000 112334489
Q ss_pred eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee----cchHhHHHHHHHHHHhh
Q 024228 204 IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL----ERPFVYNRQLKTILASL 262 (270)
Q Consensus 204 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 262 (270)
+++++|++|.++|++.++.+.+.+ +.++++++++||+.+. +.|+.+ +.|.+||++.
T Consensus 128 ~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 128 TLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp EEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred EEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 999999999999999999998887 7899999999999987 445555 9999999876
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=179.74 Aligned_cols=213 Identities=11% Similarity=-0.001 Sum_probs=147.7
Q ss_pred CCCceEEEeCCC--CCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-CCCceEEEEE
Q 024228 43 TKKHAVVLLHPF--GFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-GVEKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~l~G~ 119 (270)
.++++|||+||+ +++.. .|..+++.|...|+|+++|+||||.+... ..+.+.+++++.+.++.+ +.++++|+||
T Consensus 79 ~~~~~lv~lhG~~~~~~~~-~~~~~~~~L~~~~~v~~~d~~G~G~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~lvGh 155 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQ-VYSRLAEELDAGRRVSALVPPGFHGGQAL--PATLTVLVRSLADVVQAEVADGEFALAGH 155 (319)
T ss_dssp CSSCEEEEECCSSTTCSGG-GGHHHHHHHCTTSEEEEEECTTSSTTCCE--ESSHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCeEEEECCCCcCCCHH-HHHHHHHHhCCCceEEEeeCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 357999999995 66777 99999999976699999999999986643 358889999999888877 5589999999
Q ss_pred chhHHHHHHHHhhC---ccccccEEEecccCCCCch-hhhHhhhhccchhhh--hhccccc--HHHHHHHHHhhhhcCCC
Q 024228 120 SYGGMVGFKMAEMY---PDLVESMVVTCSVMGLTES-VSNAALERIGYESWV--DFLLPKT--ADALKVQFDIACYKLPT 191 (270)
Q Consensus 120 S~Gg~~a~~~a~~~---p~~v~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~ 191 (270)
||||.+|+.+|.++ |++++++|++++....... ............... ....... ...+............+
T Consensus 156 S~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 235 (319)
T 3lcr_A 156 SSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITAQVWCLELLRGW 235 (319)
T ss_dssp THHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHhcC
Confidence 99999999999988 7889999999987654331 111111110000000 0000000 11111111111111111
Q ss_pred ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec--chHhHHHHHHHHHHhhhh
Q 024228 192 LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE--RPFVYNRQLKTILASLVH 264 (270)
Q Consensus 192 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~ 264 (270)
.+ ..+.+|+|+++|++ ..+++.....+.+.++...+++++++ +|+.+++ +++++++.|.+||++...
T Consensus 236 ~~----~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~g-~H~~~~~~~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 236 RP----EGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAAMGQVVEAPG-DHFTIIEGEHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp CC----CCCSSCEEEEEESS-CSSSCCCTHHHHHHHHTCSEEEEESS-CTTGGGSTTTHHHHHHHHHHHHHHHHC
T ss_pred CC----CCcCCCEEEEEeCC-CCCCcccchhhhhcCCCCceEEEeCC-CcHHhhCcccHHHHHHHHHHHHHhccc
Confidence 11 34559999999998 55566667777777775688888886 8888886 899999999999988654
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=176.33 Aligned_cols=215 Identities=8% Similarity=0.014 Sum_probs=136.5
Q ss_pred ceeEEEeec-CCeE--EEEEecC------CCCCCceEEEeCC---CCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCC
Q 024228 21 MTQRTIEIE-PGTI--LNIWVPK------KTTKKHAVVLLHP---FGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV 87 (270)
Q Consensus 21 ~~~~~i~~~-~g~~--l~~~~~~------~~~~~~~vv~~hG---~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~ 87 (270)
|+.+.+.+. +|.. +.++.+. ...+.|+||++|| ..++.. .|..+++.|++. |.|+++|+||+|.+.
T Consensus 2 m~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 2 MQVEQRTLNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGR-EEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEEEEECSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCT-THHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred cceEEEEeccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCc-cchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 333444442 4544 3445554 2345789999999 556666 888999999877 999999999998544
Q ss_pred CCCCCCChHHHHHHHHHHHHH-------hC--CCceEEEEEchhHHHHHHHHhhC--------------ccccccEEEec
Q 024228 88 TDRPDRTASFQAECMAKGLRK-------LG--VEKCTLVGVSYGGMVGFKMAEMY--------------PDLVESMVVTC 144 (270)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~-------~~--~~~~~l~G~S~Gg~~a~~~a~~~--------------p~~v~~~i~~~ 144 (270)
. ......+|+.+.++. ++ .++++++|||+||.+|+.+|.++ +.+++++|+++
T Consensus 81 ~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 155 (277)
T 3bxp_A 81 S-----VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGY 155 (277)
T ss_dssp C-----CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEES
T ss_pred c-----cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeC
Confidence 3 122233333333322 23 35899999999999999999985 67899999999
Q ss_pred ccCCCCchhhhHhhhhccchhhhhhcccccHHHHH-HHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHH
Q 024228 145 SVMGLTESVSNAALERIGYESWVDFLLPKTADALK-VQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNL 223 (270)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 223 (270)
|........... .... .++. ......+........+|+|+++|++|.++|++.++.+
T Consensus 156 p~~~~~~~~~~~-------------------~~~~~~~~~---~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~ 213 (277)
T 3bxp_A 156 PVIDLTAGFPTT-------------------SAARNQITT---DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKY 213 (277)
T ss_dssp CCCBTTSSSSSS-------------------HHHHHHHCS---CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHH
T ss_pred CcccCCCCCCCc-------------------cccchhccc---hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHH
Confidence 876532210000 0000 0000 0000111122233447999999999999999998888
Q ss_pred HHHhc---CCceEEEecCCCcceeecc---------------hHhHHHHHHHHHHhhh
Q 024228 224 KEQVG---QNATMESIEKAGHLVNLER---------------PFVYNRQLKTILASLV 263 (270)
Q Consensus 224 ~~~~~---~~~~~~~~~~~gH~~~~~~---------------~~~~~~~i~~fl~~~~ 263 (270)
.+.++ .+++++++++++|.+.... .+++.+.+.+||++..
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 214 VQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 88775 2468999999999665433 4678888999998765
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-26 Score=181.93 Aligned_cols=235 Identities=15% Similarity=0.132 Sum_probs=154.4
Q ss_pred eEEEeecCCeEEEEE--ecCC--CCCCceEEEeCCCCCcccccHHH-HHHHhhcc-ceEEeecCCCCCCCCCCCCC-CCh
Q 024228 23 QRTIEIEPGTILNIW--VPKK--TTKKHAVVLLHPFGFDGILTWQF-QVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTA 95 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~--~~~~--~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~ 95 (270)
...+...||..++++ .+.. .++.|+||++||++++.. .|.. +++.|++. |.|+++|+||+|.|...... .+.
T Consensus 70 ~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~ 148 (367)
T 2hdw_A 70 KVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKE-QSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASP 148 (367)
T ss_dssp EEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTT-SHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSCCCH
T ss_pred EEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcch-hhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccccch
Confidence 344445578787764 3333 245689999999999888 8875 78888887 99999999999999865443 335
Q ss_pred HHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh------------Hh
Q 024228 96 SFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN------------AA 157 (270)
Q Consensus 96 ~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~------------~~ 157 (270)
....+|+.++++.+ +.++++++|||+||.+++.+|.++| +++++|+++|.... ..... ..
T Consensus 149 ~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~-~~~~~~~~~~~~~~~~~~~ 226 (367)
T 2hdw_A 149 DINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMT-RVMSKGYNDSVTLEQRTRT 226 (367)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHH-HHHHHTTTTCCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEecccccc-HHHhhhhccccchHHHHHH
Confidence 67778887777766 2458999999999999999999998 59999999865211 00000 00
Q ss_pred hhhccchhh-------------hhhcccccH---HHHHHHHHhhhh-c------------------CCCChhhhhhhhh-
Q 024228 158 LERIGYESW-------------VDFLLPKTA---DALKVQFDIACY-K------------------LPTLPAFVYKHIL- 201 (270)
Q Consensus 158 ~~~~~~~~~-------------~~~~~~~~~---~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~- 201 (270)
......... ...+..... ......+..... . ....+...+.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 306 (367)
T 2hdw_A 227 LEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISP 306 (367)
T ss_dssp HHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGGTT
T ss_pred HHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhhcC
Confidence 000000000 000000000 011111110000 0 0111233456677
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHh-HHHHHHHHHHhh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV-YNRQLKTILASL 262 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~i~~fl~~~ 262 (270)
+|+|+++|++|. +.+.++.+.+....++++++++++||..+.+.++. +.+.+.+||+++
T Consensus 307 ~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 307 RPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp SCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred CceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 999999999999 78888888876545899999999999988777765 589999999864
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=182.44 Aligned_cols=210 Identities=12% Similarity=0.058 Sum_probs=144.8
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEch
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSY 121 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~ 121 (270)
.++++|||+||++++.. .|..+.+ |.++|+|+++|+||++.+.. ...+.+.+++++.+.++.+. .++++|+||||
T Consensus 19 ~~~~~lv~lhg~~~~~~-~~~~~~~-l~~~~~v~~~d~~G~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS~ 94 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAF-SYASLPR-LKSDTAVVGLNCPYARDPEN--MNCTHGAMIESFCNEIRRRQPRGPYHLGGWSS 94 (265)
T ss_dssp TSSEEEEEECCTTCCGG-GGTTSCC-CSSSEEEEEEECTTTTCGGG--CCCCHHHHHHHHHHHHHHHCSSCCEEEEEETH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHh-cCCCCEEEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 45789999999999999 9999988 87779999999999976653 34789999999999999985 46899999999
Q ss_pred hHHHHHHHHh---hCccccccEEEecccCCCCchhh----hHhhhhccchhh-------h-hhcccccHHHHHHHHHhhh
Q 024228 122 GGMVGFKMAE---MYPDLVESMVVTCSVMGLTESVS----NAALERIGYESW-------V-DFLLPKTADALKVQFDIAC 186 (270)
Q Consensus 122 Gg~~a~~~a~---~~p~~v~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~ 186 (270)
||.+|+.+|. ..+++++++|++++......... ............ . ..........+...+....
T Consensus 95 Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (265)
T 3ils_A 95 GGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVVDVML 174 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCCTTHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 66778999999987654322111 111111100000 0 0000000111111111110
Q ss_pred hcCCCChhhhhhhhheeee-EEEcCC---CccC--------------CHHHHHHHHHHhc-CCceEEEecCCCccee--e
Q 024228 187 YKLPTLPAFVYKHILEKIH-LLWGEN---DKIF--------------DMQVARNLKEQVG-QNATMESIEKAGHLVN--L 245 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l-~i~g~~---D~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~--~ 245 (270)
.+. ......+.+|++ +++|++ |..+ +......+.+..+ .+.++++++|+||+.+ .
T Consensus 175 ---~~~-~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~ 250 (265)
T 3ils_A 175 ---DYK-LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQK 250 (265)
T ss_dssp ---TCC-CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGST
T ss_pred ---hcC-CCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeCh
Confidence 110 011124558987 999999 9887 3334455566554 4789999999999999 7
Q ss_pred cchHhHHHHHHHHHH
Q 024228 246 ERPFVYNRQLKTILA 260 (270)
Q Consensus 246 ~~~~~~~~~i~~fl~ 260 (270)
++++++++.|.+||+
T Consensus 251 e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 251 EHVSIISDLIDRVMA 265 (265)
T ss_dssp TTTHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHhC
Confidence 999999999999973
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-27 Score=172.06 Aligned_cols=176 Identities=17% Similarity=0.142 Sum_probs=136.1
Q ss_pred CCCCceEEEeCCCCCcccccHHHHHHHhhc--c-ceEEeecCC-------------------CCCCCCCCCCCCChHHHH
Q 024228 42 TTKKHAVVLLHPFGFDGILTWQFQVLALAK--T-YEVYVPDFL-------------------FFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 42 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~-~~v~~~d~~-------------------g~G~s~~~~~~~~~~~~~ 99 (270)
.+++|+||++||++++.. .|..+++.|++ . |.|+++|+| |+|.+. .....+.++.+
T Consensus 11 ~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~ 88 (218)
T 1auo_A 11 KPADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR-SISLEELEVSA 88 (218)
T ss_dssp SCCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC-EECHHHHHHHH
T ss_pred CCCCcEEEEEecCCCChh-hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc-ccchHHHHHHH
Confidence 356899999999999999 99999999996 5 999998766 444332 11224567778
Q ss_pred HHHHHHHHHh---C--CCceEEEEEchhHHHHHHHHh-hCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 100 ECMAKGLRKL---G--VEKCTLVGVSYGGMVGFKMAE-MYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 100 ~~~~~~l~~~---~--~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
+++.++++.+ + .++++++|||+||.+++.+|. ++|++++++|++++...... . +.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~--------------~-----~~ 149 (218)
T 1auo_A 89 KMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG--------------D-----EL 149 (218)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC--------------T-----TC
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch--------------h-----hh
Confidence 8888888887 4 348999999999999999999 99999999999998765300 0 00
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCcceeecchHh
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGHLVNLERPFV 250 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~ 250 (270)
. . ......+|+++++|++|.++|.+.++.+.+.++. +.++++++ +||..+.+.++.
T Consensus 150 ~-----------------~---~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~ 208 (218)
T 1auo_A 150 E-----------------L---SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHD 208 (218)
T ss_dssp C-----------------C---CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHH
T ss_pred h-----------------h---hhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHH
Confidence 0 0 0123348999999999999999999999998873 48999999 999998776665
Q ss_pred HHHHHHHHH
Q 024228 251 YNRQLKTIL 259 (270)
Q Consensus 251 ~~~~i~~fl 259 (270)
+.+.+.++|
T Consensus 209 ~~~~l~~~l 217 (218)
T 1auo_A 209 IGAWLAARL 217 (218)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555544
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=177.79 Aligned_cols=208 Identities=16% Similarity=0.158 Sum_probs=151.9
Q ss_pred eeEEEeecCC--eEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh
Q 024228 22 TQRTIEIEPG--TILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 22 ~~~~i~~~~g--~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
....+...+| ..+.++.+.. +++|+||++||++ ++.. .|..+++.|++. |.|+++|+||+|. .+.
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~~-~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~~~~-------~~~ 109 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPEG-TPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPE-------VRI 109 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCSS-SCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTT-------SCH
T ss_pred CccccccCCCCCceEEEEccCC-CCCCEEEEEcCcccccCChH-HHHHHHHHHHhCCCEEEEeCCCCCCC-------CCh
Confidence 4455665444 4556665554 5689999999954 6666 888899999877 9999999998864 357
Q ss_pred HHHHHHHHHHHHHhCC---CceEEEEEchhHHHHHHHHhhC------ccccccEEEecccCCCCchhhhHhhhhccchhh
Q 024228 96 SFQAECMAKGLRKLGV---EKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~---~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
...++|+.++++.+.. ++++|+|||+||.+++.+|.++ |++++++|+++|..............
T Consensus 110 ~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~~~~------- 182 (262)
T 2pbl_A 110 SEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNE------- 182 (262)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHH-------
T ss_pred HHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhhhhh-------
Confidence 7888898888887754 5999999999999999999988 88999999999876543211110000
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
.. ........ .. .+........+|+++++|++|..++.+.++.+.+.++ +++++++++||+.+.+
T Consensus 183 --~~-~~~~~~~~---~~-------~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~ 247 (262)
T 2pbl_A 183 --KF-KMDADAAI---AE-------SPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD--ADHVIAFEKHHFNVIE 247 (262)
T ss_dssp --HH-CCCHHHHH---HT-------CGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT--CEEEEETTCCTTTTTG
T ss_pred --hh-CCCHHHHH---hc-------CcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC--CeEEEeCCCCcchHHh
Confidence 00 00000000 00 0111123344899999999999999999999999996 9999999999999999
Q ss_pred chHhHHHHHHHHHH
Q 024228 247 RPFVYNRQLKTILA 260 (270)
Q Consensus 247 ~~~~~~~~i~~fl~ 260 (270)
+++.....+.+++.
T Consensus 248 ~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 248 PLADPESDLVAVIT 261 (262)
T ss_dssp GGGCTTCHHHHHHH
T ss_pred hcCCCCcHHHHHHh
Confidence 88887777777663
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=183.82 Aligned_cols=211 Identities=12% Similarity=-0.020 Sum_probs=143.5
Q ss_pred CCCceEEEeCCCCCcc--cccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHH-HHHHhCCCceEEEEE
Q 024228 43 TKKHAVVLLHPFGFDG--ILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK-GLRKLGVEKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~G~ 119 (270)
.++++|||+||++++. . .|..+...|...|.|+++|+||||.|... ..+++.+++++.+ +++.++.++++|+||
T Consensus 65 ~~~~~lvllhG~~~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~--~~~~~~~a~~~~~~l~~~~~~~~~~LvGh 141 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPH-EFTRLAGALRGIAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQGDKPFVVAGH 141 (300)
T ss_dssp SCSSEEEECCCSSTTCSTT-TTHHHHHHTSSSCCBCCCCCTTSSTTCCB--CSSHHHHHHHHHHHHHHHCSSCCEEEECC
T ss_pred CCCCeEEEECCCcccCcHH-HHHHHHHhcCCCceEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4579999999999987 7 99999999987899999999999998743 4689999999884 567778889999999
Q ss_pred chhHHHHHHHHhhCc---cccccEEEecccCCCCchhhhHhhhhccchhhhhhc-ccccHHHHHHHHHhhhhcCCCChhh
Q 024228 120 SYGGMVGFKMAEMYP---DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL-LPKTADALKVQFDIACYKLPTLPAF 195 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (270)
||||.+++.+|.++| ++++++|++++................. ....... ....................+
T Consensus 142 S~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 216 (300)
T 1kez_A 142 SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELT-ATLFDRETVRMDDTRLTALGAYDRLTGQW---- 216 (300)
T ss_dssp THHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHH-GGGCCCCSSCCCHHHHHHHHHHHHHTTTC----
T ss_pred CHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHH-HHHHhCcCCccchHHHHHHHHHHHHHhcC----
Confidence 999999999999988 4899999999876543311111111000 0000000 000001111110000000111
Q ss_pred hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHHHHhhhh
Q 024228 196 VYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 196 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
....+.+|+++++|+ |..+++.. ..+.+.++.+.+++++++ ||+.++ ++++++++.|.+||++...
T Consensus 217 ~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 217 RPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLGGGNS 283 (300)
T ss_dssp CCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTCC--
T ss_pred CCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHHHHHhccC
Confidence 124455999999995 55555433 334444444579999998 999987 8999999999999987654
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=178.20 Aligned_cols=181 Identities=18% Similarity=0.126 Sum_probs=135.9
Q ss_pred EEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEee--cCCCCCCCCCCC----CCCChH---HHHHHHHHH
Q 024228 35 NIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVP--DFLFFGSSVTDR----PDRTAS---FQAECMAKG 105 (270)
Q Consensus 35 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~--d~~g~G~s~~~~----~~~~~~---~~~~~~~~~ 105 (270)
+++.++. +++|+||++||++++.. .|..+++.|+++|.|+++ |++|+|.|.... ...... ..++++.++
T Consensus 53 ~~~~~~~-~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (251)
T 2r8b_A 53 HKSRAGV-AGAPLFVLLHGTGGDEN-QFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADF 130 (251)
T ss_dssp EEEECCC-TTSCEEEEECCTTCCHH-HHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHH
T ss_pred EEEeCCC-CCCcEEEEEeCCCCCHh-HHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHH
Confidence 3444443 56899999999999998 999999999988999999 899999775322 112322 335565555
Q ss_pred HHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHH
Q 024228 106 LRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQ 181 (270)
Q Consensus 106 l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (270)
++.+ +.++++++|||+||.+++.+|.++|++++++|++++......
T Consensus 131 l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------ 180 (251)
T 2r8b_A 131 IKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------ 180 (251)
T ss_dssp HHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------------
T ss_pred HHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc------------------------------
Confidence 5554 788999999999999999999999999999999998765321
Q ss_pred HHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEE-EecCCCcceeecchHhHHHHHHHHH
Q 024228 182 FDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NATME-SIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
.. ......+|+++++|++|.++|.+.++.+.+.++. +.++. .++++||.++.+.+ +.+.+||
T Consensus 181 -----~~-------~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~----~~~~~~l 244 (251)
T 2r8b_A 181 -----KI-------SPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIRSGEI----DAVRGFL 244 (251)
T ss_dssp -----CC-------CCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCHHHH----HHHHHHH
T ss_pred -----cc-------cccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHH----HHHHHHH
Confidence 00 0011238999999999999999999999988862 34554 77889999976655 4455666
Q ss_pred Hhhh
Q 024228 260 ASLV 263 (270)
Q Consensus 260 ~~~~ 263 (270)
++..
T Consensus 245 ~~~l 248 (251)
T 2r8b_A 245 AAYG 248 (251)
T ss_dssp GGGC
T ss_pred HHhc
Confidence 5543
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=178.81 Aligned_cols=176 Identities=13% Similarity=0.133 Sum_probs=139.6
Q ss_pred EEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-----
Q 024228 35 NIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK----- 108 (270)
Q Consensus 35 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~----- 108 (270)
.++.+....+.|+||++||++++.. .|..+++.|+++ |.|+++|+||+|.+... ..+|+.+.++.
T Consensus 86 ~~~~p~~~~~~p~vv~~HG~~~~~~-~~~~~~~~la~~G~~vv~~d~~g~g~s~~~--------~~~d~~~~~~~l~~~~ 156 (306)
T 3vis_A 86 TIYYPRENNTYGAIAISPGYTGTQS-SIAWLGERIASHGFVVIAIDTNTTLDQPDS--------RARQLNAALDYMLTDA 156 (306)
T ss_dssp EEEEESSCSCEEEEEEECCTTCCHH-HHHHHHHHHHTTTEEEEEECCSSTTCCHHH--------HHHHHHHHHHHHHHTS
T ss_pred EEEeeCCCCCCCEEEEeCCCcCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCcch--------HHHHHHHHHHHHHhhc
Confidence 3334443336789999999999998 999999999998 99999999999987531 12222222222
Q ss_pred -------hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHH
Q 024228 109 -------LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQ 181 (270)
Q Consensus 109 -------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (270)
++.++++++|||+||.+++.++.++|+ ++++|++++....
T Consensus 157 ~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~-------------------------------- 203 (306)
T 3vis_A 157 SSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLN-------------------------------- 203 (306)
T ss_dssp CHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC--------------------------------
T ss_pred chhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCc--------------------------------
Confidence 244689999999999999999999997 9999999875431
Q ss_pred HHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHhcC--CceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 182 FDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQVGQ--NATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
..+..+.+|+++++|++|.++|.+ ..+.+.+.++. ..++++++++||..+.+.++++.+.+.+|
T Consensus 204 -------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~f 270 (306)
T 3vis_A 204 -------------KSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAW 270 (306)
T ss_dssp -------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHH
T ss_pred -------------cccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHH
Confidence 012223389999999999999998 58999998874 57899999999999999999999999999
Q ss_pred HHhhhhh
Q 024228 259 LASLVHA 265 (270)
Q Consensus 259 l~~~~~~ 265 (270)
|++....
T Consensus 271 l~~~l~~ 277 (306)
T 3vis_A 271 LKRFVDE 277 (306)
T ss_dssp HHHHHSC
T ss_pred HHHHccC
Confidence 9987543
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-25 Score=172.73 Aligned_cols=232 Identities=11% Similarity=0.010 Sum_probs=149.4
Q ss_pred eeEEEeecCCeEEEEEe--cCCCCCCceEEEeCCCCCc-ccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-------
Q 024228 22 TQRTIEIEPGTILNIWV--PKKTTKKHAVVLLHPFGFD-GILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP------- 91 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~--~~~~~~~~~vv~~hG~~~~-~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~------- 91 (270)
+...+...+|..+.++. +...++.|+||++||++++ .. .|.........+|.|+++|+||+|.|.....
T Consensus 57 ~~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~ 135 (318)
T 1l7a_A 57 YRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG-EIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHAL 135 (318)
T ss_dssp EEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGG-GHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSS
T ss_pred EEEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCC-CcccccchhhCCcEEEEecCCCCCCCCCcccccCCccc
Confidence 34445555787776543 3333456899999999999 77 8877664444449999999999999875521
Q ss_pred -----------CCChHHHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh
Q 024228 92 -----------DRTASFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154 (270)
Q Consensus 92 -----------~~~~~~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~ 154 (270)
.+......+|+.++++.+. .++++++|||+||.+++.+|..+|+ +.++|+++|.........
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~~ 214 (318)
T 1l7a_A 136 GWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERAI 214 (318)
T ss_dssp SSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHHH
T ss_pred cceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHHH
Confidence 1123556777777777652 2689999999999999999999886 888888777543211110
Q ss_pred hHhhhhccchhhhhhcccc-cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceE
Q 024228 155 NAALERIGYESWVDFLLPK-TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATM 233 (270)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 233 (270)
. .............+... ............. ...+......+.+|+++++|++|.++|++.+..+.+.++..+++
T Consensus 215 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~ 290 (318)
T 1l7a_A 215 D-VALEQPYLEINSFFRRNGSPETEVQAMKTLS---YFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKEL 290 (318)
T ss_dssp H-HCCSTTTTHHHHHHHHSCCHHHHHHHHHHHH---TTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEE
T ss_pred h-cCCcCccHHHHHHHhccCCcccHHHHHHhhc---cccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeE
Confidence 0 00000000000000000 0000011111000 11233344555699999999999999999999999998755899
Q ss_pred EEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 234 ESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++++++||.. ..+..+.+.+||++..
T Consensus 291 ~~~~~~~H~~----~~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 291 KVYRYFGHEY----IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp EEETTCCSSC----CHHHHHHHHHHHHHHH
T ss_pred EEccCCCCCC----cchhHHHHHHHHHHHh
Confidence 9999999993 3456778888887654
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-26 Score=182.89 Aligned_cols=233 Identities=11% Similarity=0.023 Sum_probs=156.2
Q ss_pred ceeEEEeecCCeEEEEE--ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 21 MTQRTIEIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
++...+.. +|..+..+ .+....+.|+||++||++++....|..+...|.+. |.|+++|+||+|.|.......+.+.
T Consensus 168 ~~~v~i~~-~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~ 246 (415)
T 3mve_A 168 IKQLEIPF-EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSR 246 (415)
T ss_dssp EEEEEEEC-SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSCTTH
T ss_pred eEEEEEEE-CCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCCHHH
Confidence 45555666 67777543 34333457899999999988553666667888766 9999999999999987665566777
Q ss_pred HHHHHHHHHHHhC---CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc---hhhhhhc-
Q 024228 98 QAECMAKGLRKLG---VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY---ESWVDFL- 170 (270)
Q Consensus 98 ~~~~~~~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~- 170 (270)
+..++.+++.... .++++++|||+||.+++.+|..+|++|+++|+++|........ ......... .......
T Consensus 247 ~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 325 (415)
T 3mve_A 247 LHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFAS-PQKLQQMPKMYLDVLASRLG 325 (415)
T ss_dssp HHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHC-HHHHTTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccccccc-HHHHHHhHHHHHHHHHHHhC
Confidence 7778888777664 5689999999999999999999999999999999874321110 000000000 0000000
Q ss_pred -ccccHHHHHHHHHhhhhcCCCChhhh--hhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 171 -LPKTADALKVQFDIACYKLPTLPAFV--YKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 171 -~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
.......+...... +. ...... ...+.+|+|+++|++|.++|.+.+..+.+..+ +++++++++..+ .+.
T Consensus 326 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~-~~~l~~i~g~~~---h~~ 397 (415)
T 3mve_A 326 KSVVDIYSLSGQMAA--WS--LKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFST-YGKAKKISSKTI---TQG 397 (415)
T ss_dssp CSSBCHHHHHHHGGG--GC--TTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBT-TCEEEEECCCSH---HHH
T ss_pred CCccCHHHHHHHHhh--cC--cccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CceEEEecCCCc---ccc
Confidence 00111111111111 11 111111 23556999999999999999999999988776 899999998322 236
Q ss_pred hHhHHHHHHHHHHhhh
Q 024228 248 PFVYNRQLKTILASLV 263 (270)
Q Consensus 248 ~~~~~~~i~~fl~~~~ 263 (270)
++++.+.+.+||++..
T Consensus 398 ~~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 398 YEQSLDLAIKWLEDEL 413 (415)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh
Confidence 6778899999998764
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=185.81 Aligned_cols=231 Identities=11% Similarity=0.118 Sum_probs=143.6
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL 109 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~ 109 (270)
+....++.+....+.|+||++||++++.. . .++..|+++ |.|+++|+||+|.+.........+++.+.+..+.+..
T Consensus 144 ~l~~~l~~P~~~~~~P~Vv~~hG~~~~~~-~--~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~~ 220 (422)
T 3k2i_A 144 RVRATLFLPPGPGPFPGIIDIFGIGGGLL-E--YRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHP 220 (422)
T ss_dssp TEEEEEEECSSSCCBCEEEEECCTTCSCC-C--HHHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTST
T ss_pred cEEEEEEcCCCCCCcCEEEEEcCCCcchh-H--HHHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhCc
Confidence 45555566655456799999999987644 3 357888877 9999999999998876655555555555555444443
Q ss_pred --CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh---hhhccchhhhhhcccccHHHHHHHHHh
Q 024228 110 --GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA---LERIGYESWVDFLLPKTADALKVQFDI 184 (270)
Q Consensus 110 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (270)
+.++++|+||||||.+|+.+|.++|+ ++++|++++............ ....................+...+..
T Consensus 221 ~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (422)
T 3k2i_A 221 QVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNA 299 (422)
T ss_dssp TBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECTTSCEECTTCBCC
T ss_pred CcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCcchhHHHHHHHhh
Confidence 35799999999999999999999998 999999988763221110000 000000000000000000000000000
Q ss_pred hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHH-HHHHHHhc----CCceEEEecCCCcce----------------
Q 024228 185 ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA-RNLKEQVG----QNATMESIEKAGHLV---------------- 243 (270)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~----~~~~~~~~~~~gH~~---------------- 243 (270)
............+.++.+|+|+++|++|.++|.+.. +.+.+.+. .+.++++++++||.+
T Consensus 300 ~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~ 379 (422)
T 3k2i_A 300 LVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLL 379 (422)
T ss_dssp CTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTT
T ss_pred hhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhcccc
Confidence 000000000112445569999999999999998754 56666554 137999999999997
Q ss_pred ------------eecchHhHHHHHHHHHHhhhhh
Q 024228 244 ------------NLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 244 ------------~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
+.+.++++.+.+.+||+++...
T Consensus 380 ~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~ 413 (422)
T 3k2i_A 380 NKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGG 413 (422)
T ss_dssp TEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2245677899999999987654
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-26 Score=168.82 Aligned_cols=172 Identities=19% Similarity=0.254 Sum_probs=134.8
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhc--c-ceEEeecCC-------------------CCCCCCCCCCCCChHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAK--T-YEVYVPDFL-------------------FFGSSVTDRPDRTASFQAE 100 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--~-~~v~~~d~~-------------------g~G~s~~~~~~~~~~~~~~ 100 (270)
+++|+||++||++++.. .|..+++.|++ . |.|+++|+| |+|.+. .....+.++.++
T Consensus 22 ~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~~ 99 (226)
T 3cn9_A 22 NADACIIWLHGLGADRT-DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR-AIDEDQLNASAD 99 (226)
T ss_dssp TCCEEEEEECCTTCCGG-GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT-CBCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCChH-HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc-cccchhHHHHHH
Confidence 46789999999999998 99999999985 4 999998766 555332 223356677788
Q ss_pred HHHHHHHHh---CC--CceEEEEEchhHHHHHHHHh-hCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccccc
Q 024228 101 CMAKGLRKL---GV--EKCTLVGVSYGGMVGFKMAE-MYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (270)
Q Consensus 101 ~~~~~l~~~---~~--~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (270)
++.++++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++........ .
T Consensus 100 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~--------~------------ 159 (226)
T 3cn9_A 100 QVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL--------A------------ 159 (226)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC--------C------------
T ss_pred HHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh--------h------------
Confidence 898888887 54 58999999999999999999 9999999999999865432110 0
Q ss_pred HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCcceeecchHhH
Q 024228 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~ 251 (270)
. ......+|+++++|++|.++|.+.++.+.+.++. +.++++++ +||..+.+.++
T Consensus 160 -----------------~---~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~-- 216 (226)
T 3cn9_A 160 -----------------L---DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIH-- 216 (226)
T ss_dssp -----------------C---CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHH--
T ss_pred -----------------h---cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhHH--
Confidence 0 0123348999999999999999999999988873 58999999 99998766544
Q ss_pred HHHHHHHHHh
Q 024228 252 NRQLKTILAS 261 (270)
Q Consensus 252 ~~~i~~fl~~ 261 (270)
.+.+||++
T Consensus 217 --~i~~~l~~ 224 (226)
T 3cn9_A 217 --DIGAWLRK 224 (226)
T ss_dssp --HHHHHHHH
T ss_pred --HHHHHHHh
Confidence 46666654
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-26 Score=173.04 Aligned_cols=197 Identities=10% Similarity=0.106 Sum_probs=137.7
Q ss_pred CCCceEEEeCCCC-----CcccccHHHHHHHh----hcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC
Q 024228 43 TKKHAVVLLHPFG-----FDGILTWQFQVLAL----AKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE 112 (270)
Q Consensus 43 ~~~~~vv~~hG~~-----~~~~~~~~~~~~~l----~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~ 112 (270)
++.|+||++||++ ++.. .|..+++.| .+. |.|+++|+|+.+.... ....+++.+.+..+++.++.+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~-~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~---~~~~~d~~~~~~~l~~~~~~~ 114 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPN-DFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGLT 114 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGG-GGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTCC
T ss_pred CCCeEEEEECCCcccCCcCChH-HHHHHHHHHhhhhccCCcEEEEeecccCCCCCC---CcHHHHHHHHHHHHHHhCCcC
Confidence 4678999999966 3455 889999988 344 9999999998765432 234556666677777777889
Q ss_pred ceEEEEEchhHHHHHHHHhhC-----------------ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcc---c
Q 024228 113 KCTLVGVSYGGMVGFKMAEMY-----------------PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLL---P 172 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~-----------------p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 172 (270)
+++|+|||+||.+|+.++.++ |++++++|++++........... ........... .
T Consensus 115 ~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 190 (273)
T 1vkh_A 115 NINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEY----PEYDCFTRLAFPDGI 190 (273)
T ss_dssp CEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHC----GGGHHHHHHHCTTCG
T ss_pred cEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhc----ccHHHHHHHHhcccc
Confidence 999999999999999999986 78899999998875432211100 00000000000 0
Q ss_pred c----cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee
Q 024228 173 K----TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL 245 (270)
Q Consensus 173 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~ 245 (270)
. ......... ........+|+++++|++|.++|.+.++.+.+.++ .++++++++++||..+.
T Consensus 191 ~~~~~~~~~~~~~~-----------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~ 259 (273)
T 1vkh_A 191 QMYEEEPSRVMPYV-----------KKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVY 259 (273)
T ss_dssp GGCCCCHHHHHHHH-----------HHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGG
T ss_pred cchhhcccccChhh-----------hhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccc
Confidence 0 000000000 00122245899999999999999999999988876 24799999999999988
Q ss_pred cchHhHHHHHHHHH
Q 024228 246 ERPFVYNRQLKTIL 259 (270)
Q Consensus 246 ~~~~~~~~~i~~fl 259 (270)
++ +++.+.|.+||
T Consensus 260 ~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 260 KN-GKVAKYIFDNI 272 (273)
T ss_dssp GC-HHHHHHHHHTC
T ss_pred cC-hHHHHHHHHHc
Confidence 88 78889998886
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=178.95 Aligned_cols=235 Identities=15% Similarity=0.041 Sum_probs=144.5
Q ss_pred ceeEEEeecCCeEEEE--EecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCCC
Q 024228 21 MTQRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~ 93 (270)
.+...+...+| .+.+ +.+....+.|+||++||++ ++.. .|..++..|++ .|.|+++|+||+|.+..+....
T Consensus 48 ~~~~~i~~~~g-~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~ 125 (311)
T 2c7b_A 48 TRDVHIPVSGG-SIRARVYFPKKAAGLPAVLYYHGGGFVFGSIE-THDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVE 125 (311)
T ss_dssp EEEEEEEETTE-EEEEEEEESSSCSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHH
T ss_pred EEEEEecCCCC-cEEEEEEecCCCCCCcEEEEECCCcccCCChh-hhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHH
Confidence 34555566555 5544 4444333468999999998 7877 89999999987 4999999999999886443222
Q ss_pred ChHHHHHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccchhhh
Q 024228 94 TASFQAECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYESWV 167 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (270)
+....++++.+.++.++. ++++|+|||+||.+|+.++.++|+ +++++|+++|.................. .
T Consensus 126 d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~---~ 202 (311)
T 2c7b_A 126 DAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFGVA---E 202 (311)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHHHC---T
T ss_pred HHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHHHh---c
Confidence 333344444555555555 689999999999999999988776 4999999998876321100000000000 0
Q ss_pred hhcccccHHHHHHHHHhhhhcC----CCChhh---hhhhhheeeeEEEcCCCccCCHHHH--HHHHHHhcCCceEEEecC
Q 024228 168 DFLLPKTADALKVQFDIACYKL----PTLPAF---VYKHILEKIHLLWGENDKIFDMQVA--RNLKEQVGQNATMESIEK 238 (270)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~ 238 (270)
... ........+........ ...... .+..+ .|+++++|++|.+++.... +.+.+.. .++++++++|
T Consensus 203 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~~~~~~~~~l~~~g-~~~~~~~~~g 278 (311)
T 2c7b_A 203 TTS--LPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLRDEGELYAYKMKASG-SRAVAVRFAG 278 (311)
T ss_dssp TCS--SCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTC-CCEEEEEETTCTTHHHHHHHHHHHHHTT-CCEEEEEETT
T ss_pred cCC--CCHHHHHHHHHHhCCCCccccCcccCcccccccCC-CcceEEEcCCCCchHHHHHHHHHHHHCC-CCEEEEEeCC
Confidence 000 00011111111000000 000000 11222 4999999999999864322 3333332 3789999999
Q ss_pred CCccee-----ecchHhHHHHHHHHHHhhhh
Q 024228 239 AGHLVN-----LERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 239 ~gH~~~-----~~~~~~~~~~i~~fl~~~~~ 264 (270)
++|.+. .+.++++.+.+.+||++...
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 279 MVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 999886 35568889999999987653
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-27 Score=179.41 Aligned_cols=193 Identities=10% Similarity=0.085 Sum_probs=131.4
Q ss_pred CCCceEEEeCCCC---CcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH-------HHhCC
Q 024228 43 TKKHAVVLLHPFG---FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL-------RKLGV 111 (270)
Q Consensus 43 ~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l-------~~~~~ 111 (270)
.+.|+||++||++ ++.. .|..+++.|++. |.|+++|+||+|.+.. .......|+.+++ +.++.
T Consensus 48 ~~~p~vv~lHGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~ 121 (283)
T 3bjr_A 48 TNLPAIIIVPGGSYTHIPVA-QAESLAMAFAGHGYQAFYLEYTLLTDQQP-----LGLAPVLDLGRAVNLLRQHAAEWHI 121 (283)
T ss_dssp CCEEEEEEECCSTTTCCCHH-HHHHHHHHHHTTTCEEEEEECCCTTTCSS-----CBTHHHHHHHHHHHHHHHSHHHHTE
T ss_pred CCCcEEEEECCCccccCCcc-ccHHHHHHHHhCCcEEEEEeccCCCcccc-----CchhHHHHHHHHHHHHHHHHHHhCC
Confidence 4578999999955 3434 788899999887 9999999999988730 1112233333333 22233
Q ss_pred --CceEEEEEchhHHHHHHHHhhCccc-------------cccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHH
Q 024228 112 --EKCTLVGVSYGGMVGFKMAEMYPDL-------------VESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTAD 176 (270)
Q Consensus 112 --~~~~l~G~S~Gg~~a~~~a~~~p~~-------------v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
++++|+|||+||.+|+.+|.++|++ ++++++++|............ ...... ...
T Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~------~~~~~~-~~~--- 191 (283)
T 3bjr_A 122 DPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKDD------ATLATW-TPT--- 191 (283)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC--------------CC-CCC---
T ss_pred CcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcccccccccccc------chHHHH-HHH---
Confidence 4899999999999999999999976 999999988765322110000 000000 000
Q ss_pred HHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecch-----
Q 024228 177 ALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERP----- 248 (270)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~----- 248 (270)
.....+........+|+|+++|++|.++|++.++.+.+.++ .+++++++++++|.+..+.+
T Consensus 192 -----------~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~ 260 (283)
T 3bjr_A 192 -----------PNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWK 260 (283)
T ss_dssp -----------GGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC
T ss_pred -----------hHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCccccccccccccc
Confidence 00001111223344899999999999999999999988876 24699999999998777654
Q ss_pred --------HhHHHHHHHHHHhh
Q 024228 249 --------FVYNRQLKTILASL 262 (270)
Q Consensus 249 --------~~~~~~i~~fl~~~ 262 (270)
+++.+.+.+||++.
T Consensus 261 ~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 261 PDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp -------CCHHHHHHHHHHHHT
T ss_pred ccccchhHHHHHHHHHHHHhhc
Confidence 67888999999764
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=177.20 Aligned_cols=233 Identities=9% Similarity=0.038 Sum_probs=146.1
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCCh
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
+....++. +|..++++.+.. .+.|+||++||++ ++.. .|..++..|++. |.|+++|+||.+... .....
T Consensus 74 ~~~~~~~~-~~~~~~~~~p~~-~~~p~vv~lHGgg~~~~~~~-~~~~~~~~la~~~g~~vi~~D~r~~~~~~---~~~~~ 147 (326)
T 3d7r_A 74 ANLEKLSL-DDMQVFRFNFRH-QIDKKILYIHGGFNALQPSP-FHWRLLDKITLSTLYEVVLPIYPKTPEFH---IDDTF 147 (326)
T ss_dssp SEEEEEEE-TTEEEEEEESTT-CCSSEEEEECCSTTTSCCCH-HHHHHHHHHHHHHCSEEEEECCCCTTTSC---HHHHH
T ss_pred ceEEEEEE-CCEEEEEEeeCC-CCCeEEEEECCCcccCCCCH-HHHHHHHHHHHHhCCEEEEEeCCCCCCCC---chHHH
Confidence 34444455 688887777655 5678999999965 3555 788888888743 999999999865432 11334
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccc----cccEEEecccCCCCchhhhHhhhhccchhhhhhcc
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDL----VESMVVTCSVMGLTESVSNAALERIGYESWVDFLL 171 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (270)
++..+++..+++.++.++++|+|||+||.+|+.+|.++|++ ++++|+++|............ ... ........
T Consensus 148 ~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~-~~~--~~~~~~~~ 224 (326)
T 3d7r_A 148 QAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDIS-DAL--IEQDAVLS 224 (326)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCC-HHH--HHHCSSCC
T ss_pred HHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHH-hhh--cccCcccC
Confidence 55566666667777888999999999999999999988877 999999998765432111000 000 00000000
Q ss_pred cccHHHHHHHHHhhhhcCCCChhhhhhh--hheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-
Q 024228 172 PKTADALKVQFDIACYKLPTLPAFVYKH--ILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL- 245 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~- 245 (270)
......+...+................. ..+|+|+++|++|..++ ....+.+.+. .+++++++++++|.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~ 302 (326)
T 3d7r_A 225 QFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHP--DMKLFEQMMLQHHQYIEFYDYPKMVHDFPIY 302 (326)
T ss_dssp HHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGS
T ss_pred HHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccchH--HHHHHHHHHHHCCCcEEEEEeCCCccccccc
Confidence 0001111111110000000000001111 12699999999997543 3344444332 36899999999999988
Q ss_pred --cchHhHHHHHHHHHHhhhh
Q 024228 246 --ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 246 --~~~~~~~~~i~~fl~~~~~ 264 (270)
++++++.+.|.+||++...
T Consensus 303 ~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 303 PIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp SSHHHHHHHHHHHHHHTSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHhh
Confidence 7888999999999987653
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-27 Score=175.94 Aligned_cols=208 Identities=15% Similarity=0.149 Sum_probs=129.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC---CceEEEEE
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV---EKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~G~ 119 (270)
..+++|||+||++++.. .|..+++.|+++|+|+++|+||||.|... ..+++.+.+..+++.++. ++++|+||
T Consensus 11 ~~~~~lv~lhg~g~~~~-~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~----~~~~~~~~~~~~~~~l~~~~~~~~~lvGh 85 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA-SFRPLHAFLQGECEMLAAEPPGHGTNQTS----AIEDLEELTDLYKQELNLRPDRPFVLFGH 85 (242)
T ss_dssp TCCCEEESSCCCCHHHH-HHHHHHHHHCCSCCCEEEECCSSCCSCCC----TTTHHHHHHHHTTTTCCCCCCSSCEEECC
T ss_pred CCCceEEEECCCCCCHH-HHHHHHHhCCCCeEEEEEeCCCCCCCCCC----CcCCHHHHHHHHHHHHHhhcCCCEEEEeC
Confidence 45789999999999999 99999999988899999999999999743 233444445555555654 68999999
Q ss_pred chhHHHHHHHHhhCcc---ccccEEEecccCCC-Cch-----hhhHhhhhcc-chhhhh------hcccccHHHHHHHHH
Q 024228 120 SYGGMVGFKMAEMYPD---LVESMVVTCSVMGL-TES-----VSNAALERIG-YESWVD------FLLPKTADALKVQFD 183 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~-~~~-----~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~ 183 (270)
||||.+|+.+|.+.++ ..+++++.+..... ... .......... ...... .........+...+.
T Consensus 86 SmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (242)
T 2k2q_B 86 SMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSFFLPSFRSDYR 165 (242)
T ss_dssp SSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTTCCSCHHHHHH
T ss_pred CHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999987321 12334443321111 000 0001111000 000000 000000000111111
Q ss_pred hhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 184 IACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.. . ..... .+..+.+|+++++|++|..++ .....+.+..+ +.+++++++ ||+++.++|+++++.|.+||++.
T Consensus 166 ~~--~-~~~~~-~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~-~~~~~~~~~-gH~~~~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 166 AL--E-QFELY-DLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAK-DITFHQFDG-GHMFLLSQTEEVAERIFAILNQH 237 (242)
T ss_dssp HH--T-CCCCS-CCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCC-CSEEEEEEC-CCSHHHHHCHHHHHHHHHHHHTT
T ss_pred HH--H-hcccC-CCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhc-CCeEEEEeC-CceeEcCCHHHHHHHHHHHhhcc
Confidence 10 0 00011 144566999999999999865 44555555555 677888885 99999999999999999999764
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=164.82 Aligned_cols=184 Identities=13% Similarity=0.035 Sum_probs=122.8
Q ss_pred CceEEEeCCCCCcccccH--HHHHHHhhc---cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEE
Q 024228 45 KHAVVLLHPFGFDGILTW--QFQVLALAK---TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV 119 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~--~~~~~~l~~---~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~ 119 (270)
.|+||++||+.++.. .+ ..+.+.+.+ .|+|+++|+||+|. +..+++..+++....++++|+||
T Consensus 2 mptIl~lHGf~ss~~-s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-----------~~~~~l~~~~~~~~~~~i~l~G~ 69 (202)
T 4fle_A 2 MSTLLYIHGFNSSPS-SAKATTFKSWLQQHHPHIEMQIPQLPPYPA-----------EAAEMLESIVMDKAGQSIGIVGS 69 (202)
T ss_dssp -CEEEEECCTTCCTT-CHHHHHHHHHHHHHCTTSEEECCCCCSSHH-----------HHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CcEEEEeCCCCCCCC-ccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-----------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 389999999998877 55 334455554 38999999999974 45778888888899999999999
Q ss_pred chhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhh
Q 024228 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKH 199 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (270)
||||.+|+.+|.++|..+..++...+...... ...... ... ................... .....+
T Consensus 70 SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~ 135 (202)
T 4fle_A 70 SLGGYFATWLSQRFSIPAVVVNPAVRPFELLS----DYLGEN-QNP----YTGQKYVLESRHIYDLKAM-----QIEKLE 135 (202)
T ss_dssp THHHHHHHHHHHHTTCCEEEESCCSSHHHHGG----GGCEEE-ECT----TTCCEEEECHHHHHHHHTT-----CCSSCS
T ss_pred ChhhHHHHHHHHHhcccchheeeccchHHHHH----Hhhhhh-ccc----cccccccchHHHHHHHHhh-----hhhhhc
Confidence 99999999999999987666554433211100 000000 000 0000000000111111000 011223
Q ss_pred hheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 200 ILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 200 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
..+|+|+++|++|.+||++.+.++. + ++++.+++|+||.+ +..+++.+.|.+||+
T Consensus 136 ~~~P~LiihG~~D~~Vp~~~s~~l~---~-~~~l~i~~g~~H~~--~~~~~~~~~I~~FL~ 190 (202)
T 4fle_A 136 SPDLLWLLQQTGDEVLDYRQAVAYY---T-PCRQTVESGGNHAF--VGFDHYFSPIVTFLG 190 (202)
T ss_dssp CGGGEEEEEETTCSSSCHHHHHHHT---T-TSEEEEESSCCTTC--TTGGGGHHHHHHHHT
T ss_pred cCceEEEEEeCCCCCCCHHHHHHHh---h-CCEEEEECCCCcCC--CCHHHHHHHHHHHHh
Confidence 4489999999999999998887654 4 78999999999964 566778899999997
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.8e-26 Score=183.42 Aligned_cols=242 Identities=12% Similarity=0.127 Sum_probs=145.9
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
++++...+.. ++....++.+....+.|+||++||+++... .+ .+..|++. |.|+++|+||+|.+.........++
T Consensus 149 ~~v~~~~~~~-g~l~~~l~~P~~~~~~P~Vv~lhG~~~~~~-~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d 224 (446)
T 3hlk_A 149 PGVRREPVRV-GRVRGTLFLPPEPGPFPGIVDMFGTGGGLL-EY--RASLLAGKGFAVMALAYYNYEDLPKTMETLHLEY 224 (446)
T ss_dssp TTCEEEEEEE-TTEEEEEEECSSSCCBCEEEEECCSSCSCC-CH--HHHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHH
T ss_pred CCcEEEEecC-CeEEEEEEeCCCCCCCCEEEEECCCCcchh-hH--HHHHHHhCCCEEEEeccCCCCCCCcchhhCCHHH
Confidence 3444433333 345555666654456789999999988644 33 47888877 9999999999998876554445555
Q ss_pred HHHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh---hhhccchhhhhhccc
Q 024228 98 QAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA---LERIGYESWVDFLLP 172 (270)
Q Consensus 98 ~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 172 (270)
+.+.+..+.+..+ .++++|+||||||.+|+.+|.++|+ ++++|++++............ ...............
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTK 303 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccccc
Confidence 5555554444433 3689999999999999999999998 999999988653221110000 000000000000000
Q ss_pred ccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHHHHHhc---C-CceEEEecCCCccee---
Q 024228 173 KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNLKEQVG---Q-NATMESIEKAGHLVN--- 244 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~---~-~~~~~~~~~~gH~~~--- 244 (270)
.....+...+..............+.++.+|+|+++|++|.++|.+. ++.+.+.++ . ++++++++++||.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~ 383 (446)
T 3hlk_A 304 DGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPY 383 (446)
T ss_dssp SSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTT
T ss_pred chHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCC
Confidence 00000000000000000000001144555999999999999999844 356666554 1 379999999999982
Q ss_pred -------------------------ecchHhHHHHHHHHHHhhhhh
Q 024228 245 -------------------------LERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 245 -------------------------~~~~~~~~~~i~~fl~~~~~~ 265 (270)
.+.++++.+.+.+||+++...
T Consensus 384 ~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~ 429 (446)
T 3hlk_A 384 FPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGG 429 (446)
T ss_dssp CCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 233677889999999987643
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=164.26 Aligned_cols=183 Identities=14% Similarity=0.092 Sum_probs=130.9
Q ss_pred CeEEEE-EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeec-------------CCCCCCCCCCCCC-CCh
Q 024228 31 GTILNI-WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPD-------------FLFFGSSVTDRPD-RTA 95 (270)
Q Consensus 31 g~~l~~-~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d-------------~~g~G~s~~~~~~-~~~ 95 (270)
|..+.| +.++..++.| ||++||++++.. .|..+++.|.+.+.|+++| ++|+|.+...... ...
T Consensus 2 G~~~~~~~~~~~~~~~p-vv~lHG~g~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~ 79 (209)
T 3og9_A 2 GHMTDYVFKAGRKDLAP-LLLLHSTGGDEH-QLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESL 79 (209)
T ss_dssp --CCCEEEECCCTTSCC-EEEECCTTCCTT-TTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHH
T ss_pred CCcceEEEeCCCCCCCC-EEEEeCCCCCHH-HHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHH
Confidence 333433 3333334567 999999999999 9999999999779999999 6677665432211 233
Q ss_pred HHHHHHHHHHHHH----hCC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhh
Q 024228 96 SFQAECMAKGLRK----LGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDF 169 (270)
Q Consensus 96 ~~~~~~~~~~l~~----~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (270)
...++++.++++. .+. ++++++|||+||.+++.+|.++|++++++|++++.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~--------------- 144 (209)
T 3og9_A 80 DEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQT--------------- 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCCC---------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccccc---------------
Confidence 3444555555543 344 7899999999999999999999999999999998654221100
Q ss_pred cccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeec
Q 024228 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLE 246 (270)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~ 246 (270)
.....+|+++++|++|.++|.+.++.+.+.+. ...++++++ ++|.+..
T Consensus 145 ---------------------------~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~- 195 (209)
T 3og9_A 145 ---------------------------VQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLTQ- 195 (209)
T ss_dssp ---------------------------CCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCCH-
T ss_pred ---------------------------ccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCCH-
Confidence 00122899999999999999999988888776 136777787 6998743
Q ss_pred chHhHHHHHHHHHHhh
Q 024228 247 RPFVYNRQLKTILASL 262 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~~ 262 (270)
+..+.+.+||++.
T Consensus 196 ---~~~~~~~~~l~~~ 208 (209)
T 3og9_A 196 ---EEVLAAKKWLTET 208 (209)
T ss_dssp ---HHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhh
Confidence 3457778888764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-26 Score=191.66 Aligned_cols=232 Identities=19% Similarity=0.234 Sum_probs=156.9
Q ss_pred CCceeEEEeecCCeEEEEEecCC---CCCCceEEEeCCCCCc--ccccHHHHHHHhhcc-ceEEeecCCC---CCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKK---TTKKHAVVLLHPFGFD--GILTWQFQVLALAKT-YEVYVPDFLF---FGSSVTD 89 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~---~~~~~~vv~~hG~~~~--~~~~~~~~~~~l~~~-~~v~~~d~~g---~G~s~~~ 89 (270)
...+...+...+|..++++...+ .++.|+||++||++.. .. .|..+++.|+++ |.|+++|+|| +|.+...
T Consensus 331 ~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~ 409 (582)
T 3o4h_A 331 AGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSD-SWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRL 409 (582)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCS-SCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHH
T ss_pred CcceEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCccccccc-ccCHHHHHHHhCCCEEEEeccCCCCCCchhHHh
Confidence 34566667777898887654433 2357899999998766 55 888889999887 9999999999 5555221
Q ss_pred CC-CCChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 90 RP-DRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 90 ~~-~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
.. ........+|+.+.++.+ ..++++++|||+||.+++.+|.++|++++++|+++|........... .....
T Consensus 410 ~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~---~~~~~ 486 (582)
T 3o4h_A 410 KIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELS---DAAFR 486 (582)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTC---CHHHH
T ss_pred hhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcc---cchhH
Confidence 11 111123345555544443 33489999999999999999999999999999999865532111000 00000
Q ss_pred hhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCc
Q 024228 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGH 241 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH 241 (270)
.+...........+. ...+...+.++.+|+|+++|++|..+|++.++.+++.++. ++++++++++||
T Consensus 487 ~~~~~~~~~~~~~~~----------~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH 556 (582)
T 3o4h_A 487 NFIEQLTGGSREIMR----------SRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGH 556 (582)
T ss_dssp HHHHHHTTTCHHHHH----------HTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCS
T ss_pred HHHHHHcCcCHHHHH----------hcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 000000111111100 0112233455669999999999999999999999988862 489999999999
Q ss_pred cee-ecchHhHHHHHHHHHHhhhh
Q 024228 242 LVN-LERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 242 ~~~-~~~~~~~~~~i~~fl~~~~~ 264 (270)
.+. .++++++.+.+.+||++...
T Consensus 557 ~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 557 AINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp SCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHHHHHHcC
Confidence 987 47788899999999988754
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-25 Score=172.20 Aligned_cols=230 Identities=12% Similarity=0.022 Sum_probs=146.1
Q ss_pred eeEEEeecCCeEEEEEec--CC-CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC--C-----
Q 024228 22 TQRTIEIEPGTILNIWVP--KK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--P----- 91 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~--~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~----- 91 (270)
+...+...+|.++.++.. .. .++.|+||++||++++.. .+........+.|.|+++|+||+|.|.... .
T Consensus 69 ~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~-~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~ 147 (337)
T 1vlq_A 69 YDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEG 147 (337)
T ss_dssp EEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSS
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCC-CchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccc
Confidence 334444457888876543 22 245689999999998876 554433333445999999999999664321 0
Q ss_pred ------------------CCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccC
Q 024228 92 ------------------DRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (270)
Q Consensus 92 ------------------~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~ 147 (270)
.+......+|+.++++.+ +.++++++|||+||.+++.+|...| +++++|+.+|..
T Consensus 148 ~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~ 226 (337)
T 1vlq_A 148 PVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFL 226 (337)
T ss_dssp SBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCS
T ss_pred cCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcc
Confidence 112346678888888776 2358999999999999999999998 599999988865
Q ss_pred CCCchhhhHhhhhccchhhhhhc--ccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 148 GLTESVSNAALERIGYESWVDFL--LPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
........ .............+ .+.... ..+.... ...+.....++.+|+|+++|++|.++|++....+.+
T Consensus 227 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~ 299 (337)
T 1vlq_A 227 CHFRRAVQ-LVDTHPYAEITNFLKTHRDKEE---IVFRTLS---YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYN 299 (337)
T ss_dssp CCHHHHHH-HCCCTTHHHHHHHHHHCTTCHH---HHHHHHH---TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred cCHHHHHh-cCCCcchHHHHHHHHhCchhHH---HHHHhhh---hccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHH
Confidence 42111100 00000000000000 011111 1111000 112223345556999999999999999999999999
Q ss_pred HhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 226 QVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 226 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.++.++++++++++||.... .+..+.+.+||.+..
T Consensus 300 ~l~~~~~~~~~~~~gH~~~~---~~~~~~~~~fl~~~l 334 (337)
T 1vlq_A 300 YYAGPKEIRIYPYNNHEGGG---SFQAVEQVKFLKKLF 334 (337)
T ss_dssp HCCSSEEEEEETTCCTTTTH---HHHHHHHHHHHHHHH
T ss_pred hcCCCcEEEEcCCCCCCCcc---hhhHHHHHHHHHHHH
Confidence 99756899999999999632 234566777776554
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-24 Score=169.90 Aligned_cols=230 Identities=15% Similarity=0.168 Sum_probs=141.1
Q ss_pred CCceeEEEeec--CCeEEEEEecCCC----CCCceEEEeCCCCCcc---c-ccHHHHHHHhh-cc-ceEEeecCCCCCCC
Q 024228 19 VGMTQRTIEIE--PGTILNIWVPKKT----TKKHAVVLLHPFGFDG---I-LTWQFQVLALA-KT-YEVYVPDFLFFGSS 86 (270)
Q Consensus 19 ~~~~~~~i~~~--~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~---~-~~~~~~~~~l~-~~-~~v~~~d~~g~G~s 86 (270)
.++..+.+.+. ++..+.++.+... .+.|+||++||++... . ..|..++..|+ +. +.|+++|+||++.+
T Consensus 51 ~~v~~~~v~~~~~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~ 130 (338)
T 2o7r_A 51 SPVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH 130 (338)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTT
T ss_pred CCEEEEEEEecCCCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCC
Confidence 35666676665 3456666665432 4568999999987332 2 13888888887 44 99999999998765
Q ss_pred CCCCCCCChHHHHHHHHHHHHHh------------CCCceEEEEEchhHHHHHHHHhhCcc--------ccccEEEeccc
Q 024228 87 VTDRPDRTASFQAECMAKGLRKL------------GVEKCTLVGVSYGGMVGFKMAEMYPD--------LVESMVVTCSV 146 (270)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~------------~~~~~~l~G~S~Gg~~a~~~a~~~p~--------~v~~~i~~~~~ 146 (270)
.. ....+|+.+.++.+ +.++++|+|||+||.+|+.+|.++|+ +++++|+++|.
T Consensus 131 ~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~ 203 (338)
T 2o7r_A 131 RL-------PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPG 203 (338)
T ss_dssp CT-------THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCC
T ss_pred CC-------chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCc
Confidence 42 23345555555443 23689999999999999999999887 89999999987
Q ss_pred CCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhh----h-----cCCCC------hhhhhhhhheeeeEEEcCC
Q 024228 147 MGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC----Y-----KLPTL------PAFVYKHILEKIHLLWGEN 211 (270)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~------~~~~~~~~~~P~l~i~g~~ 211 (270)
............. ... ... ........+.... . ..... ....+..+.+|+|+++|++
T Consensus 204 ~~~~~~~~~~~~~-~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~ 275 (338)
T 2o7r_A 204 FGGSKRTGSELRL-AND-----SRL--PTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHG 275 (338)
T ss_dssp CCCSSCCHHHHHT-TTC-----SSS--CHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETT
T ss_pred cCCCcCChhhhcc-CCC-----ccc--CHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCC
Confidence 6543221111000 000 000 0000111111000 0 00000 0022233446999999999
Q ss_pred CccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecch---HhHHHHHHHHHHhhhhh
Q 024228 212 DKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERP---FVYNRQLKTILASLVHA 265 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~~~ 265 (270)
|.+++.. ..+.+.+. .++++++++++||.++.+++ +++.+.|.+||++....
T Consensus 276 D~~~~~~--~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 276 DPMIDRQ--MELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp STTHHHH--HHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC-----
T ss_pred CcchHHH--HHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhccc
Confidence 9998733 33333332 26799999999999887666 78999999999876543
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=176.49 Aligned_cols=230 Identities=14% Similarity=0.083 Sum_probs=142.8
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhc-c-ceEEeecCCCCCCCCCCCCCCCh
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAK-T-YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~-~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
++...+...+| .+.++......+.|+||++||++ ++.. .|..++..|++ . |.|+++|+||+|.+..+....+.
T Consensus 56 ~~~~~i~~~~g-~i~~~~y~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~ 133 (311)
T 1jji_A 56 VEDRTIKGRNG-DIRVRVYQQKPDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDC 133 (311)
T ss_dssp EEEEEEEETTE-EEEEEEEESSSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHH
T ss_pred EEEEEecCCCC-cEEEEEEcCCCCceEEEEECCcccccCChh-HhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHH
Confidence 45555666566 44433222234568999999998 7777 89999999983 3 99999999999998754332334
Q ss_pred HHHHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhCccc----cccEEEecccCCCCchhhhHhhhhccchhhhhh
Q 024228 96 SFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMYPDL----VESMVVTCSVMGLTESVSNAALERIGYESWVDF 169 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (270)
...++++.+.++.++.+ +++|+|||+||.+|+.++.+.+++ ++++|+++|........... .. ... ..
T Consensus 134 ~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-~~-~~~----~~ 207 (311)
T 1jji_A 134 YDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSL-LE-FGE----GL 207 (311)
T ss_dssp HHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHH-HH-TSS----SC
T ss_pred HHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccH-HH-hcC----CC
Confidence 44455555555666654 899999999999999999988776 99999999887643221110 00 000 00
Q ss_pred cccccHHHHHHHHHhhhh-----cCCC-Chh-hhhhhhheeeeEEEcCCCccCCHH--HHHHHHHHhcCCceEEEecCCC
Q 024228 170 LLPKTADALKVQFDIACY-----KLPT-LPA-FVYKHILEKIHLLWGENDKIFDMQ--VARNLKEQVGQNATMESIEKAG 240 (270)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~-----~~~~-~~~-~~~~~~~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~~g 240 (270)
. .........+...... .... .+. ..+..+ .|+++++|++|.+++.. ..+.+.+... ++++++++|++
T Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~~~~~~~~~~l~~~g~-~~~~~~~~g~~ 284 (311)
T 1jji_A 208 W-ILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENL-PPALIITAEYDPLRDEGEVFGQMLRRAGV-EASIVRYRGVL 284 (311)
T ss_dssp S-SCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTC-CEEEEEEEEEE
T ss_pred c-cCCHHHHHHHHHHhCCCCccCCCcccCcccccccCC-ChheEEEcCcCcchHHHHHHHHHHHHcCC-CEEEEEECCCC
Confidence 0 0000111111110000 0000 000 011121 69999999999998532 2233333333 78999999999
Q ss_pred cceeec-----chHhHHHHHHHHHHh
Q 024228 241 HLVNLE-----RPFVYNRQLKTILAS 261 (270)
Q Consensus 241 H~~~~~-----~~~~~~~~i~~fl~~ 261 (270)
|.+... ..+++.+.+.+||++
T Consensus 285 H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 285 HGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp TTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred eeccccCCcCHHHHHHHHHHHHHHhh
Confidence 988653 346788888899864
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=173.39 Aligned_cols=226 Identities=12% Similarity=0.029 Sum_probs=139.4
Q ss_pred eEEEeecCCeEEE--EEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCCCCh
Q 024228 23 QRTIEIEPGTILN--IWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 23 ~~~i~~~~g~~l~--~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
...+...+| .+. ++.+....+.|+||++||++ ++.. .|..++..|++ .|.|+++|+||+|.+..+. ..
T Consensus 67 ~~~i~~~~~-~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~---~~ 141 (323)
T 3ain_A 67 DITIPGSET-NIKARVYYPKTQGPYGVLVYYHGGGFVLGDIE-SYDPLCRAITNSCQCVTISVDYRLAPENKFPA---AV 141 (323)
T ss_dssp EEEEECSSS-EEEEEEEECSSCSCCCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH---HH
T ss_pred EEEecCCCC-eEEEEEEecCCCCCCcEEEEECCCccccCChH-HHHHHHHHHHHhcCCEEEEecCCCCCCCCCcc---hH
Confidence 334444455 444 44454445678999999954 6777 89999999986 4999999999999876432 22
Q ss_pred HHHHHHHHHHHHH---h-CCCceEEEEEchhHHHHHHHHhhCcccc---ccEEEecccCCCCchhhhHhhhhccchhhhh
Q 024228 96 SFQAECMAKGLRK---L-GVEKCTLVGVSYGGMVGFKMAEMYPDLV---ESMVVTCSVMGLTESVSNAALERIGYESWVD 168 (270)
Q Consensus 96 ~~~~~~~~~~l~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (270)
++..+.+..+.+. + +.++++|+|||+||.+|+.+|.+.|++. +++|+++|............ ..... .
T Consensus 142 ~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-~~~~~----~ 216 (323)
T 3ain_A 142 VDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLY-DNGEG----F 216 (323)
T ss_dssp HHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHH-HHSSS----S
T ss_pred HHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHH-HhccC----C
Confidence 2322333333322 3 4678999999999999999999988876 89999998765432211100 00000 0
Q ss_pred hcccccHHHHHHHHHhhh------hcCCCChhh-hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecC
Q 024228 169 FLLPKTADALKVQFDIAC------YKLPTLPAF-VYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEK 238 (270)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~ 238 (270)
.+ .......+..... ......+.. .+..+ .|+|+++|++|.+++ ....+.+.+. .+++++++++
T Consensus 217 ~l---~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~~--~~~~~a~~l~~ag~~~~~~~~~g 290 (323)
T 3ain_A 217 FL---TREHIDWFGQQYLRSFADLLDFRFSPILADLNDL-PPALIITAEHDPLRD--QGEAYANKLLQSGVQVTSVGFNN 290 (323)
T ss_dssp SS---CHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETT
T ss_pred CC---CHHHHHHHHHHhCCCCcccCCcccCcccCcccCC-CHHHEEECCCCccHH--HHHHHHHHHHHcCCCEEEEEECC
Confidence 00 0011111111000 000000000 11111 599999999999874 4444544443 2679999999
Q ss_pred CCcceee-----cchHhHHHHHHHHHHhhhh
Q 024228 239 AGHLVNL-----ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 239 ~gH~~~~-----~~~~~~~~~i~~fl~~~~~ 264 (270)
++|.+.. +.++++.+.+.+||++...
T Consensus 291 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 291 VIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 9999876 4457899999999987654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-25 Score=187.16 Aligned_cols=228 Identities=14% Similarity=0.087 Sum_probs=156.0
Q ss_pred cCCceeEEEeecCC-eEEEEEecCCC-----CCCceEEEeCCCCCccc--ccHHH----HHHHhhcc-ceEEeecCCCCC
Q 024228 18 LVGMTQRTIEIEPG-TILNIWVPKKT-----TKKHAVVLLHPFGFDGI--LTWQF----QVLALAKT-YEVYVPDFLFFG 84 (270)
Q Consensus 18 ~~~~~~~~i~~~~g-~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~--~~~~~----~~~~l~~~-~~v~~~d~~g~G 84 (270)
+...+...+...+| ..++++...+. ++.|+||++||++.+.. ..|.. +++.|++. |.|+++|+||+|
T Consensus 452 ~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g 531 (706)
T 2z3z_A 452 MPEIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSA 531 (706)
T ss_dssp CCCEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCS
T ss_pred CCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCc
Confidence 34456667777788 78887654432 23478999999877652 15654 67888776 999999999999
Q ss_pred CCCCCCC----CCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh
Q 024228 85 SSVTDRP----DRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154 (270)
Q Consensus 85 ~s~~~~~----~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~ 154 (270)
.+..... ........+|+.++++.+ +.++++++|||+||.+++.+|.++|++++++|+++|.........
T Consensus 532 ~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~ 611 (706)
T 2z3z_A 532 NRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYAI 611 (706)
T ss_dssp SSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSBH
T ss_pred ccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHHh
Confidence 8764311 111123356666666655 245899999999999999999999999999999998765321100
Q ss_pred hHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCc
Q 024228 155 NAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNA 231 (270)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~ 231 (270)
.... .... ........+.. . .+...+.++.+|+|+++|++|..+|++.++.+.+.++ ...
T Consensus 612 -~~~~-----~~~~-~~~~~~~~~~~----~------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~ 674 (706)
T 2z3z_A 612 -MYGE-----RYFD-APQENPEGYDA----A------NLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYP 674 (706)
T ss_dssp -HHHH-----HHHC-CTTTCHHHHHH----H------CGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCC
T ss_pred -hhhh-----hhcC-CcccChhhhhh----C------CHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCe
Confidence 0000 0000 00000111110 0 1122345556999999999999999999998888875 246
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++++++++||.+..++++++.+.+.+||+++
T Consensus 675 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 675 DYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp EEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 9999999999998888899999999999865
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-25 Score=165.04 Aligned_cols=171 Identities=12% Similarity=0.017 Sum_probs=130.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH--------HhCCCce
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR--------KLGVEKC 114 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~--------~~~~~~~ 114 (270)
+.|+||++||++++.. .|..+++.|++. |.|+++|+||.+. ..+.....+.+.+... .++.+++
T Consensus 48 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~s~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 120 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPS-TYAGLLSHWASHGFVVAAAETSNAGT------GREMLACLDYLVRENDTPYGTYSGKLNTGRV 120 (258)
T ss_dssp CEEEEEEECCTTCCGG-GGHHHHHHHHHHTCEEEEECCSCCTT------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEE
T ss_pred CceEEEEECCCCCCch-hHHHHHHHHHhCCeEEEEecCCCCcc------HHHHHHHHHHHHhcccccccccccccCccce
Confidence 5689999999999988 999999999887 9999999995311 1122233334433332 3345689
Q ss_pred EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChh
Q 024228 115 TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPA 194 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (270)
+++||||||.+++.++ .++++++++++++...... ...
T Consensus 121 ~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~~----------------------------------------~~~ 158 (258)
T 2fx5_A 121 GTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGLG----------------------------------------HDS 158 (258)
T ss_dssp EEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSSTT----------------------------------------CCG
T ss_pred EEEEEChHHHHHHHhc--cCcCeEEEEEecCcccccc----------------------------------------cch
Confidence 9999999999999988 4568999999987543100 001
Q ss_pred hhhhhhheeeeEEEcCCCccCCHHH-HHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 195 FVYKHILEKIHLLWGENDKIFDMQV-ARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 195 ~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
..+..+.+|+|+++|++|.++|.+. .+.+.+....+.+++++++++|..+.++++++.+.+.+||++..
T Consensus 159 ~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 159 ASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQL 228 (258)
T ss_dssp GGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHH
T ss_pred hhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHHh
Confidence 1233445899999999999999986 78887774346899999999999999999999999999998654
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-23 Score=160.27 Aligned_cols=227 Identities=12% Similarity=0.083 Sum_probs=145.7
Q ss_pred EEEeecCCeEEEEEecCCCCCCceEEEeCCCC---CcccccH-HHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG---FDGILTW-QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ 98 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~ 98 (270)
..+.+.+|..+.++.+.. .++|+||++||++ ++.. .| ..+...+.+. +.|+++|+|+.++ ......
T Consensus 7 ~~~~~~~~~~~~~y~p~~-~~~p~iv~~HGGg~~~g~~~-~~~~~~~~~l~~~g~~Vi~vdYrlaPe-------~~~p~~ 77 (274)
T 2qru_A 7 NNQTLANGATVTIYPTTT-EPTNYVVYLHGGGMIYGTKS-DLPEELKELFTSNGYTVLALDYLLAPN-------TKIDHI 77 (274)
T ss_dssp EEEECTTSCEEEEECCSS-SSCEEEEEECCSTTTSCCGG-GCCHHHHHHHHTTTEEEEEECCCCTTT-------SCHHHH
T ss_pred ccccccCCeeEEEEcCCC-CCCcEEEEEeCccccCCChh-hchHHHHHHHHHCCCEEEEeCCCCCCC-------CCCcHH
Confidence 356666899999887754 4578999999988 5544 44 5567778776 9999999997543 345666
Q ss_pred HHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHh---hCccccccEEEecccCCCCchhhhHh--hhhccchhhhh
Q 024228 99 AECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAE---MYPDLVESMVVTCSVMGLTESVSNAA--LERIGYESWVD 168 (270)
Q Consensus 99 ~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~---~~p~~v~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 168 (270)
.+|+.++++.+. .++++|+|+|+||.+|+.++. ..+.++++++++++............ ...........
T Consensus 78 ~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (274)
T 2qru_A 78 LRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKEIAA 157 (274)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGGGTT
T ss_pred HHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHHHhh
Confidence 777777776653 689999999999999999987 35678999998877554111000000 00000000000
Q ss_pred h-----cccccH-HHHH---------HHHHhhhhcC------CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHh
Q 024228 169 F-----LLPKTA-DALK---------VQFDIACYKL------PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQV 227 (270)
Q Consensus 169 ~-----~~~~~~-~~~~---------~~~~~~~~~~------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 227 (270)
. ...... ..+. .+........ .......+..+ +|+++++|+.|+.++...++.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~ 236 (274)
T 2qru_A 158 IDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIGRTI 236 (274)
T ss_dssp SCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHHHHS
T ss_pred hcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHHHhC
Confidence 0 000000 0000 0000000000 00111223444 79999999999999988999999998
Q ss_pred cCCceEEEecCCCcceeecchH----hHHHHHHHHHHh
Q 024228 228 GQNATMESIEKAGHLVNLERPF----VYNRQLKTILAS 261 (270)
Q Consensus 228 ~~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~ 261 (270)
+ +++++++++++|.++.+.+. ++.+.+.+||++
T Consensus 237 ~-~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 237 P-ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp T-TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred C-CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 7 89999999999998765433 457778888864
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-25 Score=162.72 Aligned_cols=179 Identities=12% Similarity=0.116 Sum_probs=132.3
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc------ceEEeecCCCCCCC-----------------CC-CCCCCChHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT------YEVYVPDFLFFGSS-----------------VT-DRPDRTASFQ 98 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~------~~v~~~d~~g~G~s-----------------~~-~~~~~~~~~~ 98 (270)
++.|+||++||++++.. .|..+.+.|.+. +.++++|.|+++.+ .. .....+.++.
T Consensus 21 ~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 99 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQ-GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVM 99 (239)
T ss_dssp CCCEEEEEECCTTCCHH-HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHH
T ss_pred CCCcEEEEEecCCCchh-hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHH
Confidence 56789999999999988 899888888754 88999887653211 10 1111356667
Q ss_pred HHHHHHHHHH-----hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 99 AECMAKGLRK-----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 99 ~~~~~~~l~~-----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
++++..+++. ++.++++|+|||+||.+++.++.++|++++++|++++...........
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~----------------- 162 (239)
T 3u0v_A 100 CQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQA----------------- 162 (239)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHHH-----------------
T ss_pred HHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHHH-----------------
Confidence 7788888876 356799999999999999999999999999999999876543211100
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhhee-eeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchH
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEK-IHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~ 249 (270)
.. .....+| +++++|++|.++|.+.++.+.+.+. .+++++++++++|.+..
T Consensus 163 --------~~-------------~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~---- 217 (239)
T 3u0v_A 163 --------LQ-------------KSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSK---- 217 (239)
T ss_dssp --------HH-------------HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH----
T ss_pred --------HH-------------hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCH----
Confidence 00 0011156 9999999999999988888888775 26899999999999873
Q ss_pred hHHHHHHHHHHhhhh
Q 024228 250 VYNRQLKTILASLVH 264 (270)
Q Consensus 250 ~~~~~i~~fl~~~~~ 264 (270)
+..+.+.+||++...
T Consensus 218 ~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 218 TELDILKLWILTKLP 232 (239)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCC
Confidence 345666677766543
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=190.43 Aligned_cols=229 Identities=15% Similarity=0.067 Sum_probs=157.8
Q ss_pred cCCceeEEEeecCC-eEEEEEecCCC-----CCCceEEEeCCCCCccc--ccHH-----HHHHHhhcc-ceEEeecCCCC
Q 024228 18 LVGMTQRTIEIEPG-TILNIWVPKKT-----TKKHAVVLLHPFGFDGI--LTWQ-----FQVLALAKT-YEVYVPDFLFF 83 (270)
Q Consensus 18 ~~~~~~~~i~~~~g-~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~--~~~~-----~~~~~l~~~-~~v~~~d~~g~ 83 (270)
+...+...+...+| ..++++...+. ++.|+||++||++++.. ..|. .+++.|++. |.|+++|+||+
T Consensus 484 ~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 563 (741)
T 2ecf_A 484 QRPVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGT 563 (741)
T ss_dssp CCCEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCC
Confidence 44566677777789 88887665432 23578999999987741 1454 578888777 99999999999
Q ss_pred CCCCCCCCC---CCh-HHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh
Q 024228 84 GSSVTDRPD---RTA-SFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV 153 (270)
Q Consensus 84 G~s~~~~~~---~~~-~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~ 153 (270)
|.+...... ... ....+|+.++++.+ +.++++++|||+||.+++.+|.++|++++++|+++|........
T Consensus 564 g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 643 (741)
T 2ecf_A 564 PRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYD 643 (741)
T ss_dssp SSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSB
T ss_pred CCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhc
Confidence 997642110 111 12355666655554 34589999999999999999999999999999999876532110
Q ss_pred hhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CC
Q 024228 154 SNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QN 230 (270)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~ 230 (270)
.... .......... ...+... .+...+.++.+|+|+++|++|..++++.++.+++.++ ..
T Consensus 644 -~~~~---------~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 706 (741)
T 2ecf_A 644 -SHYT---------ERYMDLPARN-DAGYREA------RVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQP 706 (741)
T ss_dssp -HHHH---------HHHHCCTGGG-HHHHHHH------CSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCC
T ss_pred -cccc---------hhhcCCcccC-hhhhhhc------CHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCc
Confidence 0000 0000000000 0111000 1122345566899999999999999999999988876 23
Q ss_pred ceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 231 ATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 231 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.+++++++++|.+..+.++++.+.+.+||++..
T Consensus 707 ~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 707 FELMTYPGAKHGLSGADALHRYRVAEAFLGRCL 739 (741)
T ss_dssp CEEEEETTCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCCCCCchhHHHHHHHHHHHHhc
Confidence 599999999999988777889999999998765
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-24 Score=166.14 Aligned_cols=231 Identities=13% Similarity=0.098 Sum_probs=146.4
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCce-EEEeCCCC---CcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHA-VVLLHPFG---FDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~-vv~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~ 92 (270)
.+++...+.+ +|..+ |+..+. .++++ ||++||++ ++.. .|..++..|++ .|.|+++|+|+++.+..+
T Consensus 56 ~~~~~~~~~~-~g~~~-~~p~~~-~~~~~~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~--- 128 (322)
T 3k6k_A 56 EGVELTLTDL-GGVPC-IRQATD-GAGAAHILYFHGGGYISGSPS-THLVLTTQLAKQSSATLWSLDYRLAPENPFP--- 128 (322)
T ss_dssp TTCEEEEEEE-TTEEE-EEEECT-TCCSCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTCEEEEECCCCTTTSCTT---
T ss_pred CCceEEEEEE-CCEeE-EecCCC-CCCCeEEEEEcCCcccCCChH-HHHHHHHHHHHhcCCEEEEeeCCCCCCCCCc---
Confidence 4566777777 78888 654443 44566 99999976 5666 88888888876 499999999998765422
Q ss_pred CChHHHHHHHHHHHHH-hCCCceEEEEEchhHHHHHHHHhhCccc----cccEEEecccCCCCchhhhHhhhhccchhhh
Q 024228 93 RTASFQAECMAKGLRK-LGVEKCTLVGVSYGGMVGFKMAEMYPDL----VESMVVTCSVMGLTESVSNAALERIGYESWV 167 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (270)
...++..+.+..+++. ++.++++|+|||+||.+|+.+|.+.+++ ++++|+++|............... .. .
T Consensus 129 ~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~-~~---~ 204 (322)
T 3k6k_A 129 AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLA-DR---D 204 (322)
T ss_dssp HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTG-GG---C
T ss_pred hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhcc-CC---C
Confidence 2334444444444444 4567999999999999999999988776 999999999876543221111000 00 0
Q ss_pred hhcccccHHHHHHHHHhhhhc---CCCChhhhhh--hhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCC
Q 024228 168 DFLLPKTADALKVQFDIACYK---LPTLPAFVYK--HILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKA 239 (270)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 239 (270)
.. .....+..+....... .......... ....|+|+++|++|.++ ..+..+.+.+. ..+++++++|+
T Consensus 205 ~~---~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~l~~~~g~ 279 (322)
T 3k6k_A 205 FL---AEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVELKIWPDM 279 (322)
T ss_dssp SS---SCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred Cc---CCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEEEEEECCC
Confidence 00 0011111111111100 0000000111 11279999999999884 45556655554 35799999999
Q ss_pred Ccceee-----cchHhHHHHHHHHHHhhhhh
Q 024228 240 GHLVNL-----ERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 240 gH~~~~-----~~~~~~~~~i~~fl~~~~~~ 265 (270)
+|.+.. +.++++.+.+.+||++....
T Consensus 280 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (322)
T 3k6k_A 280 PHVFQMYGKFVNAADISIKEICHWISARISK 310 (322)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHTTCC-
T ss_pred ccccccccccChHHHHHHHHHHHHHHHHHhc
Confidence 998764 44678899999999887543
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-24 Score=167.74 Aligned_cols=234 Identities=11% Similarity=0.020 Sum_probs=141.6
Q ss_pred CceeEEEe--ecCC---eEEEEEecCC-CCCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCCCCCCCCC
Q 024228 20 GMTQRTIE--IEPG---TILNIWVPKK-TTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVT 88 (270)
Q Consensus 20 ~~~~~~i~--~~~g---~~l~~~~~~~-~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~ 88 (270)
+++.+.+. ..+| ..+.++.+.. ..+.|+||++||++ ++.. .|..++..|++. |.|+++|+||+|.+..
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~ 126 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETTF 126 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred CceEEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChh-hhHHHHHHHHHhcCcEEEEecCCCCCCCCC
Confidence 44444444 4456 3445555542 34568999999998 7777 888888888863 9999999999998864
Q ss_pred CCCCCChHHHHHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhcc
Q 024228 89 DRPDRTASFQAECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
+....+....++.+.+.++.++. ++++|+|||+||.+++.++.+.++ .++++++++|........... ....
T Consensus 127 ~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~--~~~~ 204 (323)
T 1lzl_A 127 PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSM--TNFV 204 (323)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHH--HHCS
T ss_pred CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhH--HHhc
Confidence 32212222223333333334444 589999999999999999988766 499999999886543221110 0000
Q ss_pred chhhhhhcccccHHHHHHHHHhhhh---------cCC-CChhhhhhhh--heeeeEEEcCCCccCCHHHHHHHHHHhc--
Q 024228 163 YESWVDFLLPKTADALKVQFDIACY---------KLP-TLPAFVYKHI--LEKIHLLWGENDKIFDMQVARNLKEQVG-- 228 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 228 (270)
.. .. ............... ... ........++ .+|+++++|++|.+++ ....+.+.+.
T Consensus 205 ~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~ 276 (323)
T 1lzl_A 205 DT---PL---WHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLRD--EGIEYALRLLQA 276 (323)
T ss_dssp SC---SS---CCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTTHH--HHHHHHHHHHHT
T ss_pred cC---CC---CCHHHHHHHHHHhCCCCcccccccCCCcccCcccCcccCCCChhheEECCcCCchH--HHHHHHHHHHHc
Confidence 00 00 000111111111000 000 0000000111 2799999999999874 4445554443
Q ss_pred -CCceEEEecCCCcceee----cchHhHHHHHHHHHHhhhh
Q 024228 229 -QNATMESIEKAGHLVNL----ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 229 -~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~~~ 264 (270)
.++++++++|++|.+.. +.++++.+.+.+||++...
T Consensus 277 g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 277 GVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp TCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 26899999999998643 2357889999999987754
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-24 Score=179.74 Aligned_cols=235 Identities=15% Similarity=0.090 Sum_probs=157.3
Q ss_pred CceeEEEeecCCeEEEEEecCCC---------CCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCC---CCC
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKT---------TKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLF---FGS 85 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~---------~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g---~G~ 85 (270)
..+...+...+|..++++...+. ++.|+||++||++++.. ..|..+++.|+++ |.|+++|+|| +|.
T Consensus 390 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~ 469 (662)
T 3azo_A 390 EPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGR 469 (662)
T ss_dssp CCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCH
T ss_pred cceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccH
Confidence 34555666668888876554321 34688999999986554 3677788888887 9999999999 776
Q ss_pred CCCCC-----CCCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh
Q 024228 86 SVTDR-----PDRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL 158 (270)
Q Consensus 86 s~~~~-----~~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~ 158 (270)
+.... .....+++.+.+..+++. ++.++++|+|||+||.+++.++.. |++++++|+++|.......... ..
T Consensus 470 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~-~~ 547 (662)
T 3azo_A 470 AYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADG-GT 547 (662)
T ss_dssp HHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTT-CS
T ss_pred HHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcc-cc
Confidence 53221 123355666666666666 466799999999999999998886 8999999999887643211100 00
Q ss_pred hhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEE
Q 024228 159 ERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMES 235 (270)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~ 235 (270)
.... .................+.. ..+...+.++.+|+|+++|++|..+|++.++.+.+.++. .+++++
T Consensus 548 ~~~~-~~~~~~~~~~~~~~~~~~~~-------~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 619 (662)
T 3azo_A 548 HDFE-SRYLDFLIGSFEEFPERYRD-------RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLS 619 (662)
T ss_dssp CGGG-TTHHHHHTCCTTTCHHHHHH-------TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEE
T ss_pred cchh-hHhHHHHhCCCccchhHHHh-------hChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 0000 00000001000000111110 112233455668999999999999999999999999872 348999
Q ss_pred ecCCCcceee-cchHhHHHHHHHHHHhhhh
Q 024228 236 IEKAGHLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 236 ~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
++++||.+.. +++.++.+.+.+||.+...
T Consensus 620 ~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 649 (662)
T 3azo_A 620 FEGEGHGFRRKETMVRALEAELSLYAQVFG 649 (662)
T ss_dssp ETTCCSSCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCChHHHHHHHHHHHHHHHHHhC
Confidence 9999998754 6678899999999988764
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-24 Score=167.98 Aligned_cols=237 Identities=12% Similarity=0.022 Sum_probs=141.7
Q ss_pred eEEEeecCCeEE--EEEecCCCC-CCceEEEeCCCC---Cccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-C
Q 024228 23 QRTIEIEPGTIL--NIWVPKKTT-KKHAVVLLHPFG---FDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-R 93 (270)
Q Consensus 23 ~~~i~~~~g~~l--~~~~~~~~~-~~~~vv~~hG~~---~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~ 93 (270)
...+..++|..+ .++.+.... +.|+||++||++ ++.. ..|..+...|++. |.|+++|+||+|.++..... .
T Consensus 84 ~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~ 163 (361)
T 1jkm_A 84 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPS 163 (361)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTH
T ss_pred eeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCc
Confidence 334555577444 445554433 458999999987 3332 1567778888855 99999999999755422111 1
Q ss_pred ChHH---HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhh-----CccccccEEEecccCCCCchhhhHhhhhccchh
Q 024228 94 TASF---QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM-----YPDLVESMVVTCSVMGLTESVSNAALERIGYES 165 (270)
Q Consensus 94 ~~~~---~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 165 (270)
...+ ..+++.+.++.++.++++|+|||+||.+++.++.. .|++++++|++++................ ...
T Consensus 164 ~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~~-~~~ 242 (361)
T 1jkm_A 164 GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTE-LPS 242 (361)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHH-CTH
T ss_pred cHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccccccc-Ccc
Confidence 1222 23344444455576799999999999999999998 88889999999988764211000000000 000
Q ss_pred hhhhc-ccccHHHHHHHHHhhhhcC------CCCh----hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCc
Q 024228 166 WVDFL-LPKTADALKVQFDIACYKL------PTLP----AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNA 231 (270)
Q Consensus 166 ~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~ 231 (270)
..... ..........+........ ...+ ...+..+ .|+|+++|++|.+++ .++.+.+.+. .++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l-~P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~ 319 (361)
T 1jkm_A 243 LVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGL-PPFVVAVNELDPLRD--EGIAFARRLARAGVDV 319 (361)
T ss_dssp HHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTCCE
T ss_pred hhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCC-CceEEEEcCcCcchh--hHHHHHHHHHHcCCCE
Confidence 00000 0001111111111111000 0001 1223333 499999999999987 5556666554 256
Q ss_pred eEEEecCCCccee-e-----cch-HhHHHHHHHHHHhhh
Q 024228 232 TMESIEKAGHLVN-L-----ERP-FVYNRQLKTILASLV 263 (270)
Q Consensus 232 ~~~~~~~~gH~~~-~-----~~~-~~~~~~i~~fl~~~~ 263 (270)
+++++++++|.+. . +.+ +++.+.+.+||+++.
T Consensus 320 ~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 320 AARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp EEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9999999999987 3 344 778899999998764
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-23 Score=161.23 Aligned_cols=235 Identities=10% Similarity=0.030 Sum_probs=146.3
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~ 93 (270)
.+++...++. ++..+.++.+....+.|+||++||++ ++.. .|..++..|++ .|.|+++|+|+.+....+ .
T Consensus 55 ~~~~~~~~~~-~~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~---~ 129 (322)
T 3fak_A 55 DDIQVEQVTV-AGCAAEWVRAPGCQAGKAILYLHGGGYVMGSIN-THRSMVGEISRASQAAALLLDYRLAPEHPFP---A 129 (322)
T ss_dssp TTCEEEEEEE-TTEEEEEEECTTCCTTCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTSEEEEECCCCTTTSCTT---H
T ss_pred CCeeEEEEee-CCeEEEEEeCCCCCCccEEEEEcCCccccCChH-HHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC---c
Confidence 3455666666 58888888776656689999999976 4555 77778888876 399999999987654321 2
Q ss_pred ChHHHHHHHHHHHHH-hCCCceEEEEEchhHHHHHHHHhhCccc----cccEEEecccCCCCchhhhHhhhhccchhhhh
Q 024228 94 TASFQAECMAKGLRK-LGVEKCTLVGVSYGGMVGFKMAEMYPDL----VESMVVTCSVMGLTESVSNAALERIGYESWVD 168 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (270)
..++..+.+..+++. ++.++++|+|||+||.+|+.++.+.+++ ++++|+++|................ ...
T Consensus 130 ~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~----~~~ 205 (322)
T 3fak_A 130 AVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAE----ADP 205 (322)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTT----TCC
T ss_pred HHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCc----cCc
Confidence 234444444444444 4556899999999999999999887765 9999999998765332111110000 000
Q ss_pred hcccccHHHHHHHHHhhhhcCCCChhhhhhh--hheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcce
Q 024228 169 FLLPKTADALKVQFDIACYKLPTLPAFVYKH--ILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLV 243 (270)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~ 243 (270)
.+.......+...+................. -..|+|+++|+.|.++ .....+++.+. ..++++++++++|.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~ 283 (322)
T 3fak_A 206 MVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDDMIHVW 283 (322)
T ss_dssp SCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTG
T ss_pred ccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCCceeeh
Confidence 0111111111111111100001100111111 1169999999999885 35555655554 357999999999987
Q ss_pred ee-----cchHhHHHHHHHHHHhhhh
Q 024228 244 NL-----ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 244 ~~-----~~~~~~~~~i~~fl~~~~~ 264 (270)
.. +..+++.+.+.+||++...
T Consensus 284 ~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3fak_A 284 HAFHPMLPEGKQAIVRVGEFMREQWA 309 (322)
T ss_dssp GGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 63 3457788999999988754
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-23 Score=156.65 Aligned_cols=201 Identities=14% Similarity=0.095 Sum_probs=127.8
Q ss_pred ceeEEEeec-CCeEEEE--EecCCCCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCC--
Q 024228 21 MTQRTIEIE-PGTILNI--WVPKKTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR-- 93 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~--~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~-- 93 (270)
++++.+.++ ||.+|.. |.+....+.|.||++||++++.. ..+..+++.|+++ |.|+++|+||||.|.......
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~ 108 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREP 108 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------
T ss_pred ceEEEEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccccccc
Confidence 455555554 8999864 55555456788999999998754 2567788999988 999999999999886543211
Q ss_pred -----------------ChHHHHHHHHHHHHH----hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch
Q 024228 94 -----------------TASFQAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES 152 (270)
Q Consensus 94 -----------------~~~~~~~~~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~ 152 (270)
.......|....++. .+.+++.++|+|+||.+++.++...|. +++.++..+.......
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~~~ 187 (259)
T 4ao6_A 109 TDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGVNG 187 (259)
T ss_dssp CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTSTTH
T ss_pred chhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccccccc
Confidence 011122333333333 467899999999999999999999885 7777765443321110
Q ss_pred hhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCc
Q 024228 153 VSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNA 231 (270)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~ 231 (270)
. . ......++.+|+|+++|++|..+|++.+..+++.+. .+.
T Consensus 188 ~--------------------------~------------~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k 229 (259)
T 4ao6_A 188 E--------------------------D------------LVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQK 229 (259)
T ss_dssp H--------------------------H------------HHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSE
T ss_pred c--------------------------c------------hhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCe
Confidence 0 0 011123445899999999999999999999999986 356
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
+++++++ +|... ...+..+.+.+||+++.
T Consensus 230 ~l~~~~G-~H~~~--p~~e~~~~~~~fl~~hL 258 (259)
T 4ao6_A 230 TLHVNPG-KHSAV--PTWEMFAGTVDYLDQRL 258 (259)
T ss_dssp EEEEESS-CTTCC--CHHHHTHHHHHHHHHHC
T ss_pred EEEEeCC-CCCCc--CHHHHHHHHHHHHHHhc
Confidence 7888886 67542 12356677888998764
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-23 Score=162.71 Aligned_cols=230 Identities=13% Similarity=0.038 Sum_probs=141.7
Q ss_pred CCceeEEEeec--CCeEEEEEecCCC-----------------CCCceEEEeCCCCC---ccc-ccHHHHHHHhh-cc-c
Q 024228 19 VGMTQRTIEIE--PGTILNIWVPKKT-----------------TKKHAVVLLHPFGF---DGI-LTWQFQVLALA-KT-Y 73 (270)
Q Consensus 19 ~~~~~~~i~~~--~g~~l~~~~~~~~-----------------~~~~~vv~~hG~~~---~~~-~~~~~~~~~l~-~~-~ 73 (270)
.++..+.+.+. ++..+.++.+... .+.|+||++||++. +.. ..|..++..|+ +. |
T Consensus 68 ~~v~~~dv~~~~~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~ 147 (351)
T 2zsh_A 68 DGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKC 147 (351)
T ss_dssp TTEEEEEEEEETTTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTS
T ss_pred CCceEEEEEecCCCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCC
Confidence 45566666554 4556666665442 34689999999664 222 13888889998 44 9
Q ss_pred eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH------hCCC-ceEEEEEchhHHHHHHHHhhCcc---ccccEEEe
Q 024228 74 EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK------LGVE-KCTLVGVSYGGMVGFKMAEMYPD---LVESMVVT 143 (270)
Q Consensus 74 ~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~------~~~~-~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~ 143 (270)
.|+++|+||.+.+..+ ...++..+.+..+.+. ++.+ +++|+|||+||.+|+.+|.++|+ +++++|++
T Consensus 148 ~vv~~d~rg~~~~~~~---~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~ 224 (351)
T 2zsh_A 148 VVVSVNYRRAPENPYP---CAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILL 224 (351)
T ss_dssp EEEEECCCCTTTSCTT---HHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEE
T ss_pred EEEEecCCCCCCCCCc---hhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEE
Confidence 9999999998765422 1233333333333332 3456 99999999999999999999988 89999999
Q ss_pred cccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhh---cC------CC-Chhhhhhhhhe-eeeEEEcCCC
Q 024228 144 CSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACY---KL------PT-LPAFVYKHILE-KIHLLWGEND 212 (270)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~-~~~~~~~~~~~-P~l~i~g~~D 212 (270)
+|............. ... ... .........+..... .. .. .....+..+.+ |+|+++|++|
T Consensus 225 ~p~~~~~~~~~~~~~-~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D 296 (351)
T 2zsh_A 225 NPMFGGNERTESEKS-LDG-----KYF--VTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLD 296 (351)
T ss_dssp SCCCCCSSCCHHHHH-HTT-----TSS--CCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCEEEEEEETTS
T ss_pred CCccCCCcCChhhhh-cCC-----Ccc--cCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCCEEEEEcCCC
Confidence 987654321111000 000 000 000111111111100 00 00 00111222234 9999999999
Q ss_pred ccCCHHHHHHHHHHhc---CCceEEEecCCCcceee----cchHhHHHHHHHHHHh
Q 024228 213 KIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL----ERPFVYNRQLKTILAS 261 (270)
Q Consensus 213 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~ 261 (270)
.+++ ....+.+.+. .++++++++++||.++. ++++++.+.|.+||++
T Consensus 297 ~~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 297 LIRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp TTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred cchH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 9886 3344444443 37899999999999877 7889999999999974
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=156.88 Aligned_cols=175 Identities=10% Similarity=0.010 Sum_probs=125.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC------CCCChHHHHHHHHHHHHH---h--C
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR------PDRTASFQAECMAKGLRK---L--G 110 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~l~~---~--~ 110 (270)
+.+++||++||++++.. .|..+++.|... +.|+++|.+|++.-+... .....+...+.+..+++. . +
T Consensus 20 ~a~~~Vv~lHG~G~~~~-~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 98 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTAA-DIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIP 98 (210)
T ss_dssp TCSEEEEEECCTTCCHH-HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCcEEEEEeCCCCCHH-HHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45789999999999988 898888888866 999999999876322111 112233334444444443 2 3
Q ss_pred CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLP 190 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
.++++|+|+|+||.+++.++.++|+++.+++.+++............ ..
T Consensus 99 ~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~~~~-------------~~------------------ 147 (210)
T 4h0c_A 99 AEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAIGNY-------------KG------------------ 147 (210)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCGGGC-------------CB------------------
T ss_pred hhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhhhhh-------------hh------------------
Confidence 46899999999999999999999999999999987543221110000 00
Q ss_pred CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 191 TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 191 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
....+|++++||++|+++|.+.++++.+.+. .+++++++|+.||... ++++ +.+.+||.
T Consensus 148 -------~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~---~~el-~~i~~wL~ 209 (210)
T 4h0c_A 148 -------DFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS---GDEI-QLVNNTIL 209 (210)
T ss_dssp -------CCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC---HHHH-HHHHHTTT
T ss_pred -------hccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC---HHHH-HHHHHHHc
Confidence 0001799999999999999999888877765 3578999999999763 3433 66778875
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=159.47 Aligned_cols=191 Identities=12% Similarity=0.100 Sum_probs=138.2
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc----ceEEeecCCCCCCCC--C--------CC---------CCC-ChHHHH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT----YEVYVPDFLFFGSSV--T--------DR---------PDR-TASFQA 99 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~g~G~s~--~--------~~---------~~~-~~~~~~ 99 (270)
.+++|||+||++++.. .|..+++.|.+. ++|+.+|.+++|.+. + +. ..+ +.+..+
T Consensus 3 ~~~pvv~iHG~~~~~~-~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQN-RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp SCCCEEEECCCGGGHH-HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCCCEEEECCCCCCHH-HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 4678999999999999 999999999875 679988888877521 1 10 001 456778
Q ss_pred HHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhC-----ccccccEEEecccCCCCchhhhHhhhhccchhhhhhc
Q 024228 100 ECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMY-----PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL 170 (270)
Q Consensus 100 ~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (270)
+++.++++.+ +.+++.++||||||.+++.++.++ +++|+++|+++++........
T Consensus 82 ~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~---------------- 145 (250)
T 3lp5_A 82 VWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST---------------- 145 (250)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS----------------
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc----------------
Confidence 8888888877 788999999999999999999987 568999999998765432110
Q ss_pred ccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcC----CCccCCHHHHHHHHHHhcCC-ce--EEEec--CCCc
Q 024228 171 LPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGE----NDKIFDMQVARNLKEQVGQN-AT--MESIE--KAGH 241 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~----~D~~~~~~~~~~~~~~~~~~-~~--~~~~~--~~gH 241 (270)
......+..+..... ..+ . .+|+++|+|+ .|..||.+.++.+...++.. .. .+.+. +++|
T Consensus 146 -~~~~~~~~~l~~~~~----~lp-----~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H 214 (250)
T 3lp5_A 146 -TAKTSMFKELYRYRT----GLP-----E-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAH 214 (250)
T ss_dssp -SCCCHHHHHHHHTGG----GSC-----T-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSS
T ss_pred -cccCHHHHHHHhccc----cCC-----C-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCch
Confidence 001111222221110 011 1 2899999999 99999999998888887632 22 33443 4679
Q ss_pred ceeecchHhHHHHHHHHHHhhh
Q 024228 242 LVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
..+.++| ++.+.|.+||.+..
T Consensus 215 ~~l~e~~-~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 215 SDLPQNK-QIVSLIRQYLLAET 235 (250)
T ss_dssp CCHHHHH-HHHHHHHHHTSCCC
T ss_pred hcchhCH-HHHHHHHHHHhccc
Confidence 9999998 79999999997554
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=157.45 Aligned_cols=202 Identities=15% Similarity=0.091 Sum_probs=136.8
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceE----EeecCCCCC------C----CCCC-------CCCCChHHHHHHH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEV----YVPDFLFFG------S----SVTD-------RPDRTASFQAECM 102 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v----~~~d~~g~G------~----s~~~-------~~~~~~~~~~~~~ 102 (270)
.+++|||+||++++.. .|..+++.|.+.+.+ +.++..++| . +..+ ....+.+.+++++
T Consensus 2 ~~~pvvllHG~~~~~~-~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l 80 (254)
T 3ds8_A 2 DQIPIILIHGSGGNAS-SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWL 80 (254)
T ss_dssp CCCCEEEECCTTCCTT-TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHH
T ss_pred CCCCEEEECCCCCCcc-hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHH
Confidence 3678999999999999 999999999987443 333333222 1 2222 2335788888888
Q ss_pred H----HHHHHhCCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 103 A----KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 103 ~----~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
. .+.+.++.++++++||||||.+++.++.++|+ +|+++|+++++......... ...... ...+.
T Consensus 81 ~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--~~~~~~-----~~~p~ 153 (254)
T 3ds8_A 81 KIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDN--GMDLSF-----KKLPN 153 (254)
T ss_dssp HHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHH--CSCTTC-----SSCSS
T ss_pred HHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccc--cccccc-----ccCCc
Confidence 4 44455678899999999999999999999988 89999999987654432110 000000 00111
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcC------CCccCCHHHHHHHHHHhcCC---ceEEEecC--CCcc
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGE------NDKIFDMQVARNLKEQVGQN---ATMESIEK--AGHL 242 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~~--~gH~ 242 (270)
....+..+..... ..+. .+|++.|+|+ .|.+||...++.+...++.. .+.+++.+ ++|.
T Consensus 154 ~~~~~~~~~~~~~----~~~~------~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs 223 (254)
T 3ds8_A 154 STPQMDYFIKNQT----EVSP------DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQ 223 (254)
T ss_dssp CCHHHHHHHHTGG----GSCT------TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGG
T ss_pred chHHHHHHHHHHh----hCCC------CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchh
Confidence 1112222211111 0010 2899999999 99999999999888777632 34455655 7799
Q ss_pred eeecchHhHHHHHHHHHHhhhh
Q 024228 243 VNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 243 ~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.+.++|+ +.+.|..||++...
T Consensus 224 ~l~~~~~-v~~~i~~fL~~~~~ 244 (254)
T 3ds8_A 224 TLHETPK-SIEKTYWFLEKFKT 244 (254)
T ss_dssp GGGGSHH-HHHHHHHHHHTCCC
T ss_pred cccCCHH-HHHHHHHHHHHhcC
Confidence 9889886 88999999988653
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=170.90 Aligned_cols=215 Identities=15% Similarity=0.168 Sum_probs=143.5
Q ss_pred eEEEeec-CCeEEEEEecCC-CCCCceEEEeCCCC---CcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChH
Q 024228 23 QRTIEIE-PGTILNIWVPKK-TTKKHAVVLLHPFG---FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 23 ~~~i~~~-~g~~l~~~~~~~-~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
...+... ++..+.++.+.. ..+.|+||++||++ ++.. .|..+++.|+++ |.|+++|+||+|.+. ..
T Consensus 58 ~~~i~y~~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~r~~~~~~-------~~ 129 (303)
T 4e15_A 58 VDHLRYGEGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMS-MSCSIVGPLVRRGYRVAVMDYNLCPQVT-------LE 129 (303)
T ss_dssp EEEEECSSTTCEEEEEECTTCCTTCCEEEEECCSTTTSCCGG-GSCTTHHHHHHTTCEEEEECCCCTTTSC-------HH
T ss_pred eeeeccCCCCcEEEEEecCCCCCCCCEEEEECCCcCcCCChh-HHHHHHHHHHhCCCEEEEecCCCCCCCC-------hh
Confidence 3344443 445677776643 35679999999954 4444 677778888877 999999999998753 33
Q ss_pred HHHHHHHHHH-------HHhCCCceEEEEEchhHHHHHHHHhhCc-------cccccEEEecccCCCCchhhhHhhhhcc
Q 024228 97 FQAECMAKGL-------RKLGVEKCTLVGVSYGGMVGFKMAEMYP-------DLVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 97 ~~~~~~~~~l-------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-------~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
...+|+.+++ +.++.++++|+|||+||.+++.++.+.+ ++++++|++++........... ...
T Consensus 130 ~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~---~~~ 206 (303)
T 4e15_A 130 QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLE---SVN 206 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCT---TTS
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccc---ccc
Confidence 3344443333 3556789999999999999999998653 3799999999876643211100 000
Q ss_pred chhhhhhcccccHHHHHHHHHhhhhcCCCChh-hhhh----hhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPA-FVYK----HILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
. ...+ ........ ...+. .... ...+|+|+++|++|..++.+.++.+.+.++ .+++++
T Consensus 207 ~---~~~~-~~~~~~~~----------~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~ 272 (303)
T 4e15_A 207 P---KNIL-GLNERNIE----------SVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFT 272 (303)
T ss_dssp G---GGTT-CCCTTTTT----------TTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred h---hhhh-cCCHHHHH----------HcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEE
Confidence 0 0000 00000000 00000 0111 225899999999999999999999988875 257999
Q ss_pred EecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 235 SIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 235 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++++++|+.+++........+.+||.+.
T Consensus 273 ~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 273 LFKGYDHFDIIEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp EEEEEETTHHHHGGGSTTSHHHHHHHHH
T ss_pred EeCCCCchHHHHHHhCCCcHHHHHHHHh
Confidence 9999999999898888888888888654
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=165.65 Aligned_cols=224 Identities=15% Similarity=0.101 Sum_probs=138.7
Q ss_pred eeEEEeecCCeEEEE--EecCC-CCCCceEEEeCC---CCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCC
Q 024228 22 TQRTIEIEPGTILNI--WVPKK-TTKKHAVVLLHP---FGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~--~~~~~-~~~~~~vv~~hG---~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~ 93 (270)
+...+...+| .+.+ +.+.. ..+.|+||++|| ++++.. .|..+++.|+++ |.|+++|+||+|.+..+
T Consensus 49 ~~~~i~~~~g-~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~---- 122 (310)
T 2hm7_A 49 REFDMDLPGR-TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEHKFP---- 122 (310)
T ss_dssp EEEEEEETTE-EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTT----
T ss_pred EEEEeccCCC-eEEEEEEecCCCCCCCCEEEEECCCccccCChh-HhHHHHHHHHHhcCCEEEEeCCCCCCCCCCC----
Confidence 3444555555 6654 44433 345689999999 667777 899999999874 99999999999886532
Q ss_pred ChHHHHHHHHHHHHHh---------CCCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhh
Q 024228 94 TASFQAECMAKGLRKL---------GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~---------~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
...+|+.++++.+ +.++++|+|||+||.+|+.+|.++|+ +++++|+++|...............
T Consensus 123 ---~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~ 199 (310)
T 2hm7_A 123 ---AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEE 199 (310)
T ss_dssp ---HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCHHHHH
T ss_pred ---ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCcchhh
Confidence 2334444433322 23689999999999999999998876 6999999998865431110000000
Q ss_pred ccchhhhhhcccccHHHHHHHHHhhhh-----cCCCC-hh--hhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---C
Q 024228 161 IGYESWVDFLLPKTADALKVQFDIACY-----KLPTL-PA--FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---Q 229 (270)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~ 229 (270)
... .... .......+...... ..... +. ..+..+ .|+++++|++|.++ .....+.+.+. .
T Consensus 200 ~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~~~g~ 270 (310)
T 2hm7_A 200 NAE----GYLL--TGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALNKAGV 270 (310)
T ss_dssp TSS----SSSS--CHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTC
T ss_pred cCC----CCCC--CHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHHHHCCC
Confidence 000 0000 00111111110000 00000 00 011121 59999999999987 34555555554 2
Q ss_pred CceEEEecCCCcceee-----cchHhHHHHHHHHHHhhh
Q 024228 230 NATMESIEKAGHLVNL-----ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 263 (270)
+++++++++++|.+.. +.++++.+.+.+||++..
T Consensus 271 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 271 KVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp CEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 5799999999997653 556889999999998753
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=158.54 Aligned_cols=186 Identities=13% Similarity=0.099 Sum_probs=133.8
Q ss_pred CCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCC---CCCC------CCCCChHHHH
Q 024228 30 PGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGS---SVTD------RPDRTASFQA 99 (270)
Q Consensus 30 ~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~---s~~~------~~~~~~~~~~ 99 (270)
++..++|....+ ..++|+||++||++++.. .|..+.+.|++.|.|+++|.|++.. +... ....+....+
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 92 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDET-TLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAET 92 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCTT-TTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHH
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCHH-HHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHH
Confidence 345555544332 245699999999999998 9999999998789999999887421 1100 0112334456
Q ss_pred HHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 100 ECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 100 ~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
+++.++++.+ +.++++++|||+||.+++.++.++|++++++|++++.......
T Consensus 93 ~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~--------------------- 151 (223)
T 3b5e_A 93 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV--------------------- 151 (223)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC---------------------
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc---------------------
Confidence 6666666654 3468999999999999999999999999999999987543100
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCcceeecchHh
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGHLVNLERPFV 250 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~ 250 (270)
.. .....+|+++++|++|.++|.+.++ +.+.++. +.++++++ +||.+..+.
T Consensus 152 -------------~~--------~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~--- 205 (223)
T 3b5e_A 152 -------------PA--------TDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPD--- 205 (223)
T ss_dssp -------------CC--------CCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHH---
T ss_pred -------------cc--------ccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHH---
Confidence 00 0112389999999999999999888 8887762 47899999 999986443
Q ss_pred HHHHHHHHHHhhhh
Q 024228 251 YNRQLKTILASLVH 264 (270)
Q Consensus 251 ~~~~i~~fl~~~~~ 264 (270)
.+.+.+||++...
T Consensus 206 -~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 206 -AAIVRQWLAGPIA 218 (223)
T ss_dssp -HHHHHHHHHCC--
T ss_pred -HHHHHHHHHhhhh
Confidence 3577888876543
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-24 Score=182.44 Aligned_cols=228 Identities=14% Similarity=0.115 Sum_probs=150.5
Q ss_pred ccCCceeEEEeecCCeEEEEEecCC-----CCCCceEEEeCCCCCccc--ccHH--HHHHHhhcc-ceEEeecCCCCCCC
Q 024228 17 KLVGMTQRTIEIEPGTILNIWVPKK-----TTKKHAVVLLHPFGFDGI--LTWQ--FQVLALAKT-YEVYVPDFLFFGSS 86 (270)
Q Consensus 17 ~~~~~~~~~i~~~~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~--~~~~--~~~~~l~~~-~~v~~~d~~g~G~s 86 (270)
.+...+...+...+| ++.++...+ .++.|+||++||++++.. ..|. .....|++. |.|+++|+||+|.+
T Consensus 464 ~~~~~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~ 542 (723)
T 1xfd_A 464 QMPKVEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQ 542 (723)
T ss_dssp CCCBCCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSS
T ss_pred cCCCceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccc
Confidence 344566777778788 886544322 234588999999987631 1333 455677755 99999999999985
Q ss_pred CCC-----CCCCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhC----ccccccEEEecccCCCCc
Q 024228 87 VTD-----RPDRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMY----PDLVESMVVTCSVMGLTE 151 (270)
Q Consensus 87 ~~~-----~~~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~i~~~~~~~~~~ 151 (270)
... .... .....+|+.+.++.+ +.++++|+|||+||.+++.+|.++ |++++++|++++......
T Consensus 543 g~~~~~~~~~~~-~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~ 621 (723)
T 1xfd_A 543 GTKLLHEVRRRL-GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKL 621 (723)
T ss_dssp HHHHHHTTTTCT-TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTS
T ss_pred cHHHHHHHHhcc-CcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHH
Confidence 211 1111 112344444444443 245899999999999999999999 999999999998765331
Q ss_pred hhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhc--
Q 024228 152 SVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL-EKIHLLWGENDKIFDMQVARNLKEQVG-- 228 (270)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 228 (270)
.. ....... .. .+.... ..+ ....+...+.++. +|+|+++|++|..+|++.++.+.+.++
T Consensus 622 ~~-~~~~~~~-----~~--~~~~~~--------~~~-~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~ 684 (723)
T 1xfd_A 622 YA-SAFSERY-----LG--LHGLDN--------RAY-EMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRG 684 (723)
T ss_dssp SB-HHHHHHH-----HC--CCSSCC--------SST-TTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHT
T ss_pred hh-hhccHhh-----cC--CccCCh--------hHH-HhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHC
Confidence 10 0000000 00 000000 000 0111223445566 799999999999999999999888774
Q ss_pred -CCceEEEecCCCcce-eecchHhHHHHHHHHHHhhh
Q 024228 229 -QNATMESIEKAGHLV-NLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 229 -~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~ 263 (270)
.++++++++++||.+ ..+.++.+.+.+.+||+++.
T Consensus 685 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 685 KANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp TCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred CCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHh
Confidence 367999999999998 45788899999999998654
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-23 Score=160.37 Aligned_cols=228 Identities=17% Similarity=0.102 Sum_probs=137.9
Q ss_pred ceeEEEeecCCeEEEE--EecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCC
Q 024228 21 MTQRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~ 93 (270)
++...+...+|..+.+ +.+.. .+.|+||++||++ ++.. .|..++..|+.. +.|+++|+|+.+....+ .
T Consensus 60 ~~~~~i~~~~G~~i~~~~~~P~~-~~~p~vv~~HGgG~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p---~ 134 (317)
T 3qh4_A 60 VADDVVTGEAGRPVPVRIYRAAP-TPAPVVVYCHAGGFALGNLD-TDHRQCLELARRARCAVVSVDYRLAPEHPYP---A 134 (317)
T ss_dssp EEEEEEECTTSCEEEEEEEECSC-SSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTT---H
T ss_pred EEEEEecCCCCCeEEEEEEecCC-CCCcEEEEECCCcCccCChH-HHHHHHHHHHHHcCCEEEEecCCCCCCCCCc---h
Confidence 3445556667756654 44443 4678999999987 5555 788888888743 99999999987654322 1
Q ss_pred ChHHHHHHHHHHHH---HhC--CCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccch
Q 024228 94 TASFQAECMAKGLR---KLG--VEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 94 ~~~~~~~~~~~~l~---~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
..++..+.+..+.+ .++ .++++|+|||+||.+|+.++.+.++ .++++++++|................
T Consensus 135 ~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~--- 211 (317)
T 3qh4_A 135 ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSEFRAT--- 211 (317)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHHTTTC---
T ss_pred HHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCHHHhcCC---
Confidence 12222222222222 234 3489999999999999999987665 49999999998765411111100000
Q ss_pred hhhhhcccccHHHHHHHHHhhhhcC---CCChhhhhhhh--heeeeEEEcCCCccCC--HHHHHHHHHHhcCCceEEEec
Q 024228 165 SWVDFLLPKTADALKVQFDIACYKL---PTLPAFVYKHI--LEKIHLLWGENDKIFD--MQVARNLKEQVGQNATMESIE 237 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (270)
...........+....... .........++ ..|+++++|+.|.+++ ...++.+.+... ++++++++
T Consensus 212 ------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~~D~~~~~~~~~a~~l~~~g~-~~~l~~~~ 284 (317)
T 3qh4_A 212 ------PAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQRLLGAGV-STELHIFP 284 (317)
T ss_dssp ------SSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEESTTHHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred ------CCcCHHHHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecCcCCCchhHHHHHHHHHHcCC-CEEEEEeC
Confidence 0000111111111111100 00000001111 1599999999999987 334455544443 78999999
Q ss_pred CCCccee-----ecchHhHHHHHHHHHHhhh
Q 024228 238 KAGHLVN-----LERPFVYNRQLKTILASLV 263 (270)
Q Consensus 238 ~~gH~~~-----~~~~~~~~~~i~~fl~~~~ 263 (270)
|++|.+. .+.++++.+.+.+||++..
T Consensus 285 g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l 315 (317)
T 3qh4_A 285 RACHGFDSLLPEWTTSQRLFAMQGHALADAF 315 (317)
T ss_dssp EEETTHHHHCTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCccchhhhcCCchHHHHHHHHHHHHHHHHh
Confidence 9999854 3556788999999998764
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=157.38 Aligned_cols=212 Identities=13% Similarity=0.100 Sum_probs=133.6
Q ss_pred CCeEEEE--EecCC--CCCCceEEEeCCCCCcccccHHH---HHHHhhcc-ceEEeecCCCCCCCCCCCC----------
Q 024228 30 PGTILNI--WVPKK--TTKKHAVVLLHPFGFDGILTWQF---QVLALAKT-YEVYVPDFLFFGSSVTDRP---------- 91 (270)
Q Consensus 30 ~g~~l~~--~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~G~s~~~~~---------- 91 (270)
.|..+.+ +.+.. ..+.|+||++||++++.. .|.. +.+.+.+. +.|+++|+||+|.|.....
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~ 103 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHA-NVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAG 103 (278)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBC
T ss_pred cCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCcc
Confidence 5666654 44433 345689999999999988 7776 34555554 9999999999998854320
Q ss_pred ------------CCC-hHHHHHHHHHHHHHh-CC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh
Q 024228 92 ------------DRT-ASFQAECMAKGLRKL-GV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN 155 (270)
Q Consensus 92 ------------~~~-~~~~~~~~~~~l~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~ 155 (270)
... .+...+++..+++.. +. ++++|+|||+||.+|+.+|.++|++++++++++|..........
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~ 183 (278)
T 3e4d_A 104 FYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSADWS 183 (278)
T ss_dssp TTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGCTTT
T ss_pred ccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCCccc
Confidence 011 233456677777765 55 78999999999999999999999999999999987653321110
Q ss_pred HhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhh--heeeeEEEcCCCccCCHHH-HHHHHHHhc---C
Q 024228 156 AALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI--LEKIHLLWGENDKIFDMQV-ARNLKEQVG---Q 229 (270)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~-~~~~~~~~~---~ 229 (270)
.. .....+... ..... ...+....... .+|+++++|++|.+++... .+.+.+.+. .
T Consensus 184 ~~-------~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~ 245 (278)
T 3e4d_A 184 EP-------ALEKYLGAD-RAAWR----------RYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDI 245 (278)
T ss_dssp HH-------HHHHHHCSC-GGGGG----------GGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSC
T ss_pred hh-------hHHHhcCCc-HHHHH----------hcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCC
Confidence 00 000000000 00000 00011111111 2699999999999998532 466666665 2
Q ss_pred CceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 230 NATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++++++++|++|.... -+...+.+.+|+.+.
T Consensus 246 ~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~~ 276 (278)
T 3e4d_A 246 GLTLRMHDRYDHSYYF--ISTFMDDHLKWHAER 276 (278)
T ss_dssp EEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCcCHHH--HHHHHHHHHHHHHHh
Confidence 4689999999997643 123344455666543
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-22 Score=153.28 Aligned_cols=220 Identities=13% Similarity=0.126 Sum_probs=135.5
Q ss_pred eeEEEeec-CCeEEEE--EecCC---CCCCceEEEeCCCCCcccccHHHH---HHHhhcc-ceEEeecCCCCCCCCCCCC
Q 024228 22 TQRTIEIE-PGTILNI--WVPKK---TTKKHAVVLLHPFGFDGILTWQFQ---VLALAKT-YEVYVPDFLFFGSSVTDRP 91 (270)
Q Consensus 22 ~~~~i~~~-~g~~l~~--~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~~-~~v~~~d~~g~G~s~~~~~ 91 (270)
+...+..+ +|..+.+ +.+.. .++.|+||++||++++.. .|... ...+.+. +.|+++|.+++|.+.....
T Consensus 18 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~ 96 (280)
T 3i6y_A 18 KQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDE-NFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDE 96 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSS-HHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCS
T ss_pred EEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChh-HHhhcccHHHHHhhCCeEEEEeCCcccccccCccc
Confidence 33444433 5666654 44443 345689999999999888 77663 4555555 9999999997776432211
Q ss_pred C---------------------CC-hHHHHHHHHHHHHH-hCC-CceEEEEEchhHHHHHHHHhhCccccccEEEecccC
Q 024228 92 D---------------------RT-ASFQAECMAKGLRK-LGV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (270)
Q Consensus 92 ~---------------------~~-~~~~~~~~~~~l~~-~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~ 147 (270)
. .. .+...+++..+++. +.. ++++|+|||+||.+|+.+|.++|++++++++++|..
T Consensus 97 ~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 176 (280)
T 3i6y_A 97 GYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPIN 176 (280)
T ss_dssp STTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCC
T ss_pred ccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCcc
Confidence 0 01 23345677777754 344 789999999999999999999999999999999876
Q ss_pred CCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh--eeeeEEEcCCCccCCHHH-HHHHH
Q 024228 148 GLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL--EKIHLLWGENDKIFDMQV-ARNLK 224 (270)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~i~g~~D~~~~~~~-~~~~~ 224 (270)
........... ....+.. ..... ....+........ +|+++++|++|.+++.+. .+.+.
T Consensus 177 ~~~~~~~~~~~-------~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 238 (280)
T 3i6y_A 177 NPVNCPWGQKA-------FTAYLGK-DTDTW----------REYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLE 238 (280)
T ss_dssp CGGGSHHHHHH-------HHHHHCS-CGGGT----------GGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHH
T ss_pred ccccCchHHHH-------HHHhcCC-chHHH----------HhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHH
Confidence 54321110000 0000000 00000 0011111222222 799999999999998643 45555
Q ss_pred HHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 225 EQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 225 ~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+.+. .++++++++|++|.... -....+.+.+|+.+.
T Consensus 239 ~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~~ 277 (280)
T 3i6y_A 239 AAASSNNYPLELRSHEGYDHSYYF--IASFIEDHLRFHSNY 277 (280)
T ss_dssp HHHHHTTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCceEEEeCCCCccHHH--HHHhHHHHHHHHHhh
Confidence 5443 36799999999997632 223445555666554
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-23 Score=152.24 Aligned_cols=202 Identities=16% Similarity=0.112 Sum_probs=133.5
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-c--eEEeecCCCCCCCCCC---------C---------CCCChHHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-Y--EVYVPDFLFFGSSVTD---------R---------PDRTASFQAEC 101 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~--~v~~~d~~g~G~s~~~---------~---------~~~~~~~~~~~ 101 (270)
.+.++|||+||++++.. .|..+++.|.+. + +|+.+|.+++|.+... + ...+....+++
T Consensus 4 ~~~~pvvliHG~~~~~~-~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 4 IKTTATLFLHGYGGSER-SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp -CCEEEEEECCTTCCGG-GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCCCcEEEECCCCCChh-HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 34689999999999999 999999999987 4 6999999988874210 0 11244445555
Q ss_pred HHHHHHH----hCCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhccc
Q 024228 102 MAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (270)
Q Consensus 102 ~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (270)
+.++++. ++.+++.++||||||.+++.++.++|+ +|+++|+++++............ .........+
T Consensus 83 l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~----~~~~~~~g~p 158 (249)
T 3fle_A 83 IKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVN----EIIVDKQGKP 158 (249)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTT----TSCBCTTCCB
T ss_pred HHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcc----hhhhcccCCC
Confidence 5555544 478899999999999999999999874 79999999987654321110000 0000000001
Q ss_pred cc-HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcC------CCccCCHHHHHHHHHHhcCC---ceEEEecC--CC
Q 024228 173 KT-ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGE------NDKIFDMQVARNLKEQVGQN---ATMESIEK--AG 240 (270)
Q Consensus 173 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~~--~g 240 (270)
.. ...+..+... ...+....+|+|.|+|+ .|..||...++.+...+... .+.+++.| +.
T Consensus 159 ~~~~~~~~~l~~~---------~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~ 229 (249)
T 3fle_A 159 SRMNAAYRQLLSL---------YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQ 229 (249)
T ss_dssp SSCCHHHHHTGGG---------HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGS
T ss_pred cccCHHHHHHHHH---------HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCc
Confidence 11 1111111111 01111122799999998 79999999998877766622 34455655 89
Q ss_pred cceeecchHhHHHHHHHHH
Q 024228 241 HLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl 259 (270)
|....+++ ++.+.|.+||
T Consensus 230 Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 230 HSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp TGGGGGCH-HHHHHHHHHH
T ss_pred hhccccCH-HHHHHHHHHh
Confidence 99988887 5889999997
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.9e-23 Score=159.63 Aligned_cols=224 Identities=17% Similarity=0.084 Sum_probs=139.6
Q ss_pred eeEEEeecCCeEEE--EEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCCCC
Q 024228 22 TQRTIEIEPGTILN--IWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDRT 94 (270)
Q Consensus 22 ~~~~i~~~~g~~l~--~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~ 94 (270)
+...+...+| .+. ++.+.. .++|+||++||++ ++.. .|..++..|++ +|.|+++|+|+.+....
T Consensus 64 ~~~~~~~~~g-~i~~~~~~p~~-~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~V~~~dyr~~p~~~~------ 134 (326)
T 3ga7_A 64 RTCAVPTPYG-DVTTRLYSPQP-TSQATLYYLHGGGFILGNLD-THDRIMRLLARYTGCTVIGIDYSLSPQARY------ 134 (326)
T ss_dssp EEEEECCTTS-CEEEEEEESSS-SCSCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHCSEEEEECCCCTTTSCT------
T ss_pred EEEEeecCCC-CeEEEEEeCCC-CCCcEEEEECCCCcccCChh-hhHHHHHHHHHHcCCEEEEeeCCCCCCCCC------
Confidence 3444555566 454 444443 3459999999988 7777 89999999988 49999999998765432
Q ss_pred hHHHHHHHHHHHHHh---------CCCceEEEEEchhHHHHHHHHhhCccc------cccEEEecccCCCCchhhhHhhh
Q 024228 95 ASFQAECMAKGLRKL---------GVEKCTLVGVSYGGMVGFKMAEMYPDL------VESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~---------~~~~~~l~G~S~Gg~~a~~~a~~~p~~------v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
....+|+.+.++.+ +.++++|+|+|+||.+|+.++.+.+++ +++++++++..............
T Consensus 135 -~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~ 213 (326)
T 3ga7_A 135 -PQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLFG 213 (326)
T ss_dssp -THHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHHHCC
T ss_pred -CcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHhhhc
Confidence 22234444333332 346899999999999999999988764 89999998876543322111100
Q ss_pred hccchhhhhhcccccHHHHHHHHHhhhh----cCCCCh---hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---C
Q 024228 160 RIGYESWVDFLLPKTADALKVQFDIACY----KLPTLP---AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---Q 229 (270)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~ 229 (270)
.. . .. ........+...... ...... ...+....+|+++++|+.|.+++ ....+++.+. .
T Consensus 214 ~~-~----~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~ 283 (326)
T 3ga7_A 214 GA-W----DG---LTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQ 283 (326)
T ss_dssp CT-T----TT---CCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTC
T ss_pred CC-C----CC---CCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCC
Confidence 00 0 00 001111111111000 000000 01111233699999999999984 5555555554 2
Q ss_pred CceEEEecCCCcceee-----cchHhHHHHHHHHHHhhhhh
Q 024228 230 NATMESIEKAGHLVNL-----ERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~~~ 265 (270)
.+++++++|++|.+.. +..+++.+.+.+||++....
T Consensus 284 ~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 284 PCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 5799999999998854 34578889999999887643
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=162.41 Aligned_cols=213 Identities=9% Similarity=0.041 Sum_probs=141.1
Q ss_pred eEEEeCC--CCCcccccHHHHHHHhhccceEEeecCCCCCCCCC---CCCCCChHHHHHHHHHHHHHh-CCCceEEEEEc
Q 024228 47 AVVLLHP--FGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVT---DRPDRTASFQAECMAKGLRKL-GVEKCTLVGVS 120 (270)
Q Consensus 47 ~vv~~hG--~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~l~G~S 120 (270)
+++++|| .+++.. .|..+++.|...+.|+++|+||+|.+.. .....+++.+++++.+.++.+ ..++++|+|||
T Consensus 91 ~l~~~hg~g~~~~~~-~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~S 169 (319)
T 2hfk_A 91 VLVGCTGTAANGGPH-EFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLLGHA 169 (319)
T ss_dssp EEEEECCCCTTCSTT-TTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEEEEET
T ss_pred cEEEeCCCCCCCcHH-HHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 8999998 667777 9999999998779999999999999721 223478999999999999877 46789999999
Q ss_pred hhHHHHHHHHhhCc----cccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhh
Q 024228 121 YGGMVGFKMAEMYP----DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFV 196 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p----~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (270)
+||.+|+.+|.+.+ ++|++++++++...............+..........+.....+............+.
T Consensus 170 ~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 245 (319)
T 2hfk_A 170 GGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPR---- 245 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCC----
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHHHHhCC----
Confidence 99999999999874 4699999999875433221111110000000000011111111111000000000010
Q ss_pred hhhhheeeeEEEcCCCccCCHHH-HHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHHHHhhhhhc
Q 024228 197 YKHILEKIHLLWGENDKIFDMQV-ARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTILASLVHAN 266 (270)
Q Consensus 197 ~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~~~ 266 (270)
...+.+|+++++| +|..++... ...+.+..+.+.+++.++ ++|+.++ ++++.+++.|.+||++.....
T Consensus 246 ~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~~~~~~ 315 (319)
T 2hfk_A 246 PGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDAIEGIE 315 (319)
T ss_dssp CCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHHHHC--
T ss_pred CCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHhcCCCC
Confidence 1344589999999 999887655 444444444467899999 5999765 799999999999998776543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=173.81 Aligned_cols=230 Identities=13% Similarity=0.076 Sum_probs=150.2
Q ss_pred cCCceeEEEeecCCeEEEEEecCC-----CCCCceEEEeCCCCCccc--ccHH-HHHHHhh-cc-ceEEeecCCCCCCCC
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPKK-----TTKKHAVVLLHPFGFDGI--LTWQ-FQVLALA-KT-YEVYVPDFLFFGSSV 87 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~--~~~~-~~~~~l~-~~-~~v~~~d~~g~G~s~ 87 (270)
+...+...+...+ ..++++...+ ..+.|+||++||++++.. ..|. .+...|. +. |.|+++|+||+|.+.
T Consensus 465 ~~~~~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~ 543 (719)
T 1z68_A 465 LPKEEIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQG 543 (719)
T ss_dssp CCEEEEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSC
T ss_pred CCceEEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCc
Confidence 3445666677755 8887654332 234578999999987742 1332 3444553 44 999999999999876
Q ss_pred CCCC----CCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh
Q 024228 88 TDRP----DRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 88 ~~~~----~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
.... ........+|+.++++.+ +.++++++|||+||.+++.+|.++|++++++|+++|........ ...
T Consensus 544 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-~~~ 622 (719)
T 1z68_A 544 DKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYA-SVY 622 (719)
T ss_dssp HHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSB-HHH
T ss_pred hhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhc-ccc
Confidence 3211 011123455555555544 23589999999999999999999999999999999876543210 000
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhe-eeeEEEcCCCccCCHHHHHHHHHHhc---CCceE
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE-KIHLLWGENDKIFDMQVARNLKEQVG---QNATM 233 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~ 233 (270)
... ... .+...... ..+.. ..+...+.++.+ |+|+++|++|..+|++.++.+.+.++ ...++
T Consensus 623 ~~~-----~~g--~~~~~~~~-~~~~~------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 688 (719)
T 1z68_A 623 TER-----FMG--LPTKDDNL-EHYKN------STVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQA 688 (719)
T ss_dssp HHH-----HHC--CSSTTTTH-HHHHH------TCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEE
T ss_pred chh-----hcC--Ccccccch-hhhhh------CCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEE
Confidence 000 000 00000000 01110 011123444556 99999999999999999999988775 24679
Q ss_pred EEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 234 ESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++++++||.+..++++.+.+.+.+||+++.
T Consensus 689 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 689 MWYSDQNHGLSGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp EEETTCCTTCCTHHHHHHHHHHHHHHHHHH
T ss_pred EEECcCCCCCCcccHHHHHHHHHHHHHHhh
Confidence 999999999966778999999999998764
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-24 Score=165.07 Aligned_cols=208 Identities=10% Similarity=-0.012 Sum_probs=142.3
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-CCCceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-GVEKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~l~G~S~G 122 (270)
++++|+++||++++.. .|..+++.|...+.|+++|+||+|.+.. ...+.+.+++++.+.+..+ +.++++|+|||||
T Consensus 100 ~~~~l~~lhg~~~~~~-~~~~l~~~L~~~~~v~~~d~~g~~~~~~--~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~G 176 (329)
T 3tej_A 100 NGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIIGIQSPRPNGPMQ--TAANLDEVCEAHLATLLEQQPHGPYYLLGYSLG 176 (329)
T ss_dssp SSCEEEEECCTTSCCG-GGGGGGGTSCTTCEEEEECCCTTTSHHH--HCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHH
T ss_pred CCCcEEEEeCCcccch-HHHHHHHhcCCCCeEEEeeCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEccC
Confidence 4789999999999999 9999999997779999999999987653 2357899999988888776 4569999999999
Q ss_pred HHHHHHHHhh---CccccccEEEecccCCCCchhhhHhhhhcc-----------chhhhhhc---ccccHHHHHHHHHhh
Q 024228 123 GMVGFKMAEM---YPDLVESMVVTCSVMGLTESVSNAALERIG-----------YESWVDFL---LPKTADALKVQFDIA 185 (270)
Q Consensus 123 g~~a~~~a~~---~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~~~~~~~~~~~~~ 185 (270)
|.+|+.+|.+ +|++|.+++++++................. ........ .......+...+...
T Consensus 177 g~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (329)
T 3tej_A 177 GTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADA 256 (329)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHH
Confidence 9999999999 999999999999876532111000000000 00000000 000011111111110
Q ss_pred -hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch--HhHHHHHHHHHH
Q 024228 186 -CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP--FVYNRQLKTILA 260 (270)
Q Consensus 186 -~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~ 260 (270)
....... ...+.+|++++.|++|...+.+....+.+..+ +.+++.++ +||+.+++.+ +.+.+.|.+||.
T Consensus 257 ~~~~~~~~----~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~-~~~~~~v~-g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 257 VRLLTTAH----SVPFDGKATLFVAERTLQEGMSPERAWSPWIA-ELDIYRQD-CAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp HHHHTTCC----CCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEE-EEEEEEES-SCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred HHHHhcCC----CCCcCCCeEEEEeccCCCCCCCchhhHHHhcC-CcEEEEec-CChHHhCCChHHHHHHHHHHHHhc
Confidence 0000000 12344899999999998877665566666665 78999998 6999888776 778888988874
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.6e-22 Score=168.92 Aligned_cols=232 Identities=13% Similarity=0.081 Sum_probs=149.2
Q ss_pred eeEEEeecCCeEEEEEec--CC---CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC---CC
Q 024228 22 TQRTIEIEPGTILNIWVP--KK---TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD---RP 91 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~--~~---~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~---~~ 91 (270)
+...+...||.++.++.. .. ..+.|+||++||+++... ..|......|.++ |.|+++|+||+|.+... ..
T Consensus 418 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~ 497 (695)
T 2bkl_A 418 EQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAG 497 (695)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTT
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhh
Confidence 445556668988876543 21 235789999999765543 2455555555555 99999999998876422 11
Q ss_pred C-CChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 92 D-RTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 92 ~-~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
. .......+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|+.+|........... ....
T Consensus 498 ~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~----~~~~ 573 (695)
T 2bkl_A 498 RLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFG----SGRT 573 (695)
T ss_dssp SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST----TGGG
T ss_pred HhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccC----CCcc
Confidence 1 12233456666666655 35689999999999999999999999999999999876543211000 0000
Q ss_pred hhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh--eeeeEEEcCCCccCCHHHHHHHHHHhcC------CceEEEe
Q 024228 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL--EKIHLLWGENDKIFDMQVARNLKEQVGQ------NATMESI 236 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~ 236 (270)
....+..+........+...... ..+..+. +|+|+++|++|..+++..+..+.+.++. .++++++
T Consensus 574 ~~~~~g~~~~~~~~~~~~~~sp~-------~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 646 (695)
T 2bkl_A 574 WIPEYGTAEKPEDFKTLHAYSPY-------HHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIE 646 (695)
T ss_dssp GHHHHCCTTSHHHHHHHHHHCGG-------GCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEE
T ss_pred hHHHhCCCCCHHHHHHHHhcChH-------hhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEe
Confidence 00011111111111111111111 1112222 5999999999999999999999988762 3789999
Q ss_pred cCCCcceee--cchHhHHHHHHHHHHhhhh
Q 024228 237 EKAGHLVNL--ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 237 ~~~gH~~~~--~~~~~~~~~i~~fl~~~~~ 264 (270)
+++||.... +++.+....+.+||.+...
T Consensus 647 ~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 647 ANAGHGGADQVAKAIESSVDLYSFLFQVLD 676 (695)
T ss_dssp TTCBTTBCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 999999843 4566677889999987653
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=174.43 Aligned_cols=231 Identities=14% Similarity=0.049 Sum_probs=148.9
Q ss_pred CCceeEEEeecCCeEEEEEecCC-----CCCCceEEEeCCCCCccc--ccHH-HHHHHhh-cc-ceEEeecCCCCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKK-----TTKKHAVVLLHPFGFDGI--LTWQ-FQVLALA-KT-YEVYVPDFLFFGSSVT 88 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~--~~~~-~~~~~l~-~~-~~v~~~d~~g~G~s~~ 88 (270)
...+...+ ..+|..+.++...+ ..+.|+||++||++++.. ..|. .+...+. +. |.|+++|+||+|.+..
T Consensus 472 ~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~ 550 (740)
T 4a5s_A 472 PSKKLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGD 550 (740)
T ss_dssp CEEEEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCH
T ss_pred CccEEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCCh
Confidence 44455556 45899888754433 234589999999987731 1332 2334454 34 9999999999997643
Q ss_pred CCC----CCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh
Q 024228 89 DRP----DRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL 158 (270)
Q Consensus 89 ~~~----~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~ 158 (270)
... ........+|+.++++.+ +.++++|+|||+||.+|+.+|.++|++++++|+++|......... ...
T Consensus 551 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-~~~ 629 (740)
T 4a5s_A 551 KIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS-VYT 629 (740)
T ss_dssp HHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH-HHH
T ss_pred hHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhh-HHH
Confidence 210 011112245555555544 236899999999999999999999999999999998765321110 000
Q ss_pred hhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhe-eeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 159 ERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE-KIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
.. .. -.+...... ..+.. ..+...+.++.+ |+|+++|++|..+|++.+..+.+.+. ...+++
T Consensus 630 ~~-----~~--~~p~~~~~~-~~~~~------~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~ 695 (740)
T 4a5s_A 630 ER-----YM--GLPTPEDNL-DHYRN------STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAM 695 (740)
T ss_dssp HH-----HH--CCSSTTTTH-HHHHH------SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEE
T ss_pred HH-----Hc--CCCCccccH-HHHHh------CCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEE
Confidence 00 00 000000000 00100 011223444555 99999999999999999998888875 356899
Q ss_pred EecCCCcce-eecchHhHHHHHHHHHHhhhhh
Q 024228 235 SIEKAGHLV-NLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 235 ~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
++++++|.+ ..+.++.+.+.+.+||+++...
T Consensus 696 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~ 727 (740)
T 4a5s_A 696 WYTDEDHGIASSTAHQHIYTHMSHFIKQCFSL 727 (740)
T ss_dssp EETTCCTTCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred EECCCCCcCCCCccHHHHHHHHHHHHHHHcCC
Confidence 999999998 4577888999999999987643
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-21 Score=154.70 Aligned_cols=232 Identities=13% Similarity=0.038 Sum_probs=138.9
Q ss_pred CCceeEEEee--cCCeEEEEEe-cCCC-----------------------CCCceEEEeCCCCCc---cc-ccHHHHHHH
Q 024228 19 VGMTQRTIEI--EPGTILNIWV-PKKT-----------------------TKKHAVVLLHPFGFD---GI-LTWQFQVLA 68 (270)
Q Consensus 19 ~~~~~~~i~~--~~g~~l~~~~-~~~~-----------------------~~~~~vv~~hG~~~~---~~-~~~~~~~~~ 68 (270)
.++..+.+.+ .+|..+..+. +... .+.|+||++||++.. .. ..|..++..
T Consensus 60 ~~v~~~dv~~~~~~gl~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~ 139 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRR 139 (365)
T ss_dssp TTEEEEEEEEETTTTEEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHH
T ss_pred CCCceeeEEecCCCCceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHH
Confidence 4555555554 4787777776 5431 346899999998642 22 136778888
Q ss_pred hhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----------CCC-ceEEEEEchhHHHHHHHHhhCcc
Q 024228 69 LAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----------GVE-KCTLVGVSYGGMVGFKMAEMYPD 135 (270)
Q Consensus 69 l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----------~~~-~~~l~G~S~Gg~~a~~~a~~~p~ 135 (270)
|++. +.|+++|+|+.+... .....+|+.+.++.+ +.+ +++|+|+|+||.+|+.++.+.++
T Consensus 140 la~~~g~~Vv~~dyR~~p~~~-------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~ 212 (365)
T 3ebl_A 140 FVKLSKGVVVSVNYRRAPEHR-------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD 212 (365)
T ss_dssp HHHHHTSEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEeeCCCCCCCC-------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHh
Confidence 8763 999999999765432 223345555444433 344 89999999999999999998766
Q ss_pred ---ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC-----CCC-hh-hhhhhhh----
Q 024228 136 ---LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL-----PTL-PA-FVYKHIL---- 201 (270)
Q Consensus 136 ---~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~-~~~~~~~---- 201 (270)
+++++|+++|................. .. ........+........ ... +. .....+.
T Consensus 213 ~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~ 284 (365)
T 3ebl_A 213 EGVKVCGNILLNAMFGGTERTESERRLDGK-----YF---VTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPF 284 (365)
T ss_dssp TTCCCCEEEEESCCCCCSSCCHHHHHHTTT-----SS---CCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCTTSCC
T ss_pred cCCceeeEEEEccccCCCcCChhhhhcCCC-----cc---cCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhccCCC
Confidence 799999999987643322111100000 00 00011111111110000 000 00 0011111
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCccee----ecchHhHHHHHHHHHHhhhhhcc
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVN----LERPFVYNRQLKTILASLVHANG 267 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~~~~~~~~ 267 (270)
.|+|+++|++|.+++. ...+.+.+. ..+++++++|++|.++ .++.+++.+.|.+||+++.....
T Consensus 285 pP~Li~~G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 285 AKSLIIVSGLDLTCDR--QLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp CCEEEEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC---
T ss_pred CCEEEEEcCcccchhH--HHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 5899999999987653 344444433 3679999999999876 35667899999999998765443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.7e-22 Score=169.00 Aligned_cols=232 Identities=11% Similarity=0.021 Sum_probs=141.1
Q ss_pred eeEEEeecCCeEEEEEecCC---CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC---CC-
Q 024228 22 TQRTIEIEPGTILNIWVPKK---TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR---PD- 92 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~---~~- 92 (270)
+...+...||.++.++...+ .++.|+||++||+++... ..|......|.++ |.|+++|+||+|.+.... ..
T Consensus 462 ~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~ 541 (741)
T 1yr2_A 462 EQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRR 541 (741)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSG
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhh
Confidence 44455566898887755332 245799999999886654 2455555666666 999999999998763211 11
Q ss_pred CChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhh
Q 024228 93 RTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
.......+|+.+.++.+ +.++++++|||+||.+++.++.++|++++++|+.+|........... ......
T Consensus 542 ~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~----~~~~~~ 617 (741)
T 1yr2_A 542 DKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFT----AGRYWV 617 (741)
T ss_dssp GGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGST----TGGGGH
T ss_pred hcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCC----CCchhH
Confidence 11122344555444443 45689999999999999999999999999999999876543211000 000000
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCCChhhhhhh-hh-eeeeEEEcCCCccCCHHHHHHHHHHhcC------CceEEEecC
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKH-IL-EKIHLLWGENDKIFDMQVARNLKEQVGQ------NATMESIEK 238 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~ 238 (270)
.....+........+... .+...+.. +. .|+|+++|++|..+++..+.++.+.++. .++++++++
T Consensus 618 ~~~g~~~~~~~~~~~~~~-------sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~ 690 (741)
T 1yr2_A 618 DDYGYPEKEADWRVLRRY-------SPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETR 690 (741)
T ss_dssp HHHCCTTSHHHHHHHHTT-------CGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC--
T ss_pred HHcCCCCCHHHHHHHHHc-------CchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCC
Confidence 011111111111111111 11112222 33 3999999999999999999998887762 378999999
Q ss_pred CCcceeec--chHhHHHHHHHHHHhhhh
Q 024228 239 AGHLVNLE--RPFVYNRQLKTILASLVH 264 (270)
Q Consensus 239 ~gH~~~~~--~~~~~~~~i~~fl~~~~~ 264 (270)
+||..... +..++...+.+||.+...
T Consensus 691 ~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 691 AGHGSGKPIDKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99998663 335788889999987654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.1e-22 Score=168.50 Aligned_cols=232 Identities=15% Similarity=0.065 Sum_probs=146.4
Q ss_pred eeEEEeecCCeEEEEEec--CC---CCCCceEEEeCCCCCccc-ccHHHHHHHhhc-c-ceEEeecCCCCCCCCCCC---
Q 024228 22 TQRTIEIEPGTILNIWVP--KK---TTKKHAVVLLHPFGFDGI-LTWQFQVLALAK-T-YEVYVPDFLFFGSSVTDR--- 90 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~--~~---~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~-~-~~v~~~d~~g~G~s~~~~--- 90 (270)
+...+...||.++.++.. .. ..+.|+||++||+++... ..|......|.+ + |.|+++|+||+|.+....
T Consensus 438 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~ 517 (710)
T 2xdw_A 438 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKG 517 (710)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHT
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHh
Confidence 444555568988876543 22 235789999999876654 234444444544 4 999999999998763211
Q ss_pred C-CCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 91 P-DRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 91 ~-~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
. ........+|+.+.++.+ +.++++++|||+||.+++.++.++|++++++|+.+|........... ...
T Consensus 518 ~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~----~~~ 593 (710)
T 2xdw_A 518 GILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT----IGH 593 (710)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST----TGG
T ss_pred hhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccC----CCh
Confidence 0 011122344555554444 44689999999999999999999999999999999876543221100 000
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhh-----hhhe-eeeEEEcCCCccCCHHHHHHHHHHhc---------
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYK-----HILE-KIHLLWGENDKIFDMQVARNLKEQVG--------- 228 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~--------- 228 (270)
......-.+........+...... ..+. .+.+ |+|+++|++|..+++..+.++.+.++
T Consensus 594 ~~~~~~g~~~~~~~~~~~~~~sp~-------~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 666 (710)
T 2xdw_A 594 AWTTDYGCSDSKQHFEWLIKYSPL-------HNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQ 666 (710)
T ss_dssp GGHHHHCCTTSHHHHHHHHHHCGG-------GCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTC
T ss_pred hHHHhCCCCCCHHHHHHHHHhCcH-------hhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCC
Confidence 000011111111211111111111 1122 3344 99999999999999998888887764
Q ss_pred -CCceEEEecCCCcceeec--chHhHHHHHHHHHHhhhh
Q 024228 229 -QNATMESIEKAGHLVNLE--RPFVYNRQLKTILASLVH 264 (270)
Q Consensus 229 -~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~ 264 (270)
..+++++++++||..... ++.+....+.+||.+...
T Consensus 667 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 667 NNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp CSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 134899999999998663 346788899999987654
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=148.50 Aligned_cols=192 Identities=13% Similarity=0.062 Sum_probs=128.5
Q ss_pred CCceEEEeCCCCCcccccHH----HHHHHhhc-cceEEeecCC---------------------CCCCCCCCC------C
Q 024228 44 KKHAVVLLHPFGFDGILTWQ----FQVLALAK-TYEVYVPDFL---------------------FFGSSVTDR------P 91 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~----~~~~~l~~-~~~v~~~d~~---------------------g~G~s~~~~------~ 91 (270)
.+|+||++||++++.. .|. .+.+.|.+ .|+|+++|+| |+|.+.... .
T Consensus 4 ~~~~vl~lHG~g~~~~-~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGK-VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCEEEEECCTTCCHH-HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred cCceEEEeCCCCccHH-HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 4689999999999988 776 46677777 4999999999 445442111 1
Q ss_pred CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc------cccccEEEecccCCCCchhhhHhhhhccchh
Q 024228 92 DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP------DLVESMVVTCSVMGLTESVSNAALERIGYES 165 (270)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 165 (270)
..+....++.+.+.++..+ ++++|+||||||.+|+.+|.+.+ ..++.++++++........ . ...
T Consensus 83 ~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~--~------~~~ 153 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP--E------HPG 153 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT--T------STT
T ss_pred hhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc--c------ccc
Confidence 1455666777777666544 67999999999999999998753 2467777777654321110 0 000
Q ss_pred hhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC------ceEEEecCC
Q 024228 166 WVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN------ATMESIEKA 239 (270)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 239 (270)
.. .+. . .+ .... .....+.+|+++++|++|.++|++.++.+.+.++.. ...++++++
T Consensus 154 ~~-~~~-~---~~---------~~~~---~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 216 (243)
T 1ycd_A 154 EL-RIT-E---KF---------RDSF---AVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPG 216 (243)
T ss_dssp CE-EEC-G---GG---------TTTT---CCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESS
T ss_pred cc-ccc-h---hH---------HHhc---cCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCC
Confidence 00 000 0 00 0000 012334589999999999999999999998887621 356677788
Q ss_pred CcceeecchHhHHHHHHHHHHhhhh
Q 024228 240 GHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 240 gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
||....+ +.+.+.+.+||++...
T Consensus 217 gH~~~~~--~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 217 GHMVPNK--KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp SSSCCCC--HHHHHHHHHHHHHHHC
T ss_pred CCcCCch--HHHHHHHHHHHHHhhh
Confidence 9987654 3588999999987654
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-21 Score=146.51 Aligned_cols=206 Identities=16% Similarity=0.081 Sum_probs=133.9
Q ss_pred CCCceEEEeCCCCCcccccHHH--HHHHhhc-c-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CCC
Q 024228 43 TKKHAVVLLHPFGFDGILTWQF--QVLALAK-T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------GVE 112 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~-~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~------~~~ 112 (270)
.+.|+||++||++++.. .|.. ....+.+ . +.|+++|+++++.+.........+.+++++..+++.. +.+
T Consensus 39 ~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 117 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHN-SWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKRE 117 (263)
T ss_dssp CCBCEEEEECCTTCCTT-HHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGG
T ss_pred CCCCEEEEECCCCCCHH-HHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCC
Confidence 35689999999999988 8887 4555554 3 8888999998887765433334566778888888875 236
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhh--hcCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC--YKLP 190 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 190 (270)
+++++|||+||.+|+.++. +|+++++++++++......... .... . .........+.... ....
T Consensus 118 ~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~-~~~~-~-----------~~~~~~~~~~~~~~~~~~~~ 183 (263)
T 2uz0_A 118 KTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSP-ESQN-L-----------GSPAYWRGVFGEIRDWTTSP 183 (263)
T ss_dssp GEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCG-GGTT-C-----------SCHHHHHHHHCCCSCTTTST
T ss_pred ceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccc-cccc-c-----------ccchhHHHHcCChhhhcccc
Confidence 8999999999999999999 9999999999998875443110 0000 0 00000111111000 0001
Q ss_pred CChhhhhhhhh--eeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhh
Q 024228 191 TLPAFVYKHIL--EKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 191 ~~~~~~~~~~~--~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
..+......+. +|+++++|++|.+++ ..+.+.+.+. .+.++++++| +|.... .++..+.+.+||.+....
T Consensus 184 ~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~g-~H~~~~--~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 184 YSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSAG-THEWYY--WEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp TSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEESC-CSSHHH--HHHHHHHHHHHSSSCCCC
T ss_pred CCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEECCC-CcCHHH--HHHHHHHHHHHHHhhccc
Confidence 11222233332 799999999999885 3455555554 2468999998 997632 234557788888776554
Q ss_pred ccC
Q 024228 266 NGQ 268 (270)
Q Consensus 266 ~~~ 268 (270)
+++
T Consensus 259 ~~~ 261 (263)
T 2uz0_A 259 EER 261 (263)
T ss_dssp CCC
T ss_pred hhc
Confidence 443
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-21 Score=147.12 Aligned_cols=219 Identities=12% Similarity=0.079 Sum_probs=131.8
Q ss_pred eeEEEeec-CCeEEEE--EecCC---CCCCceEEEeCCCCCcccccHHH---HHHHhhcc-ceEEeecCCCCCCCCCCCC
Q 024228 22 TQRTIEIE-PGTILNI--WVPKK---TTKKHAVVLLHPFGFDGILTWQF---QVLALAKT-YEVYVPDFLFFGSSVTDRP 91 (270)
Q Consensus 22 ~~~~i~~~-~g~~l~~--~~~~~---~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~G~s~~~~~ 91 (270)
+...+... .|..+.+ +.+.. .++.|+||++||++++.. .|.. +...+.+. +.|+++|.+++|.+.....
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~ 94 (280)
T 3ls2_A 16 KQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDE-NFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNED 94 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCS
T ss_pred EEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChh-hhhcchhHHHHHhhCCeEEEEeCCccccccccccc
Confidence 33344432 5666655 44443 235689999999999888 7765 34555555 9999999987765532110
Q ss_pred ---------------------CCC-hHHHHHHHHHHHHHh-C-CCceEEEEEchhHHHHHHHHhhCccccccEEEecccC
Q 024228 92 ---------------------DRT-ASFQAECMAKGLRKL-G-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (270)
Q Consensus 92 ---------------------~~~-~~~~~~~~~~~l~~~-~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~ 147 (270)
... .+...+++..+++.. . .++++|+|||+||.+|+.++.++|++++++++++|..
T Consensus 95 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~ 174 (280)
T 3ls2_A 95 SYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIV 174 (280)
T ss_dssp CTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCS
T ss_pred ccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCcc
Confidence 001 233455666777654 2 2689999999999999999999999999999999876
Q ss_pred CCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhh----heeeeEEEcCCCccCCHH-----
Q 024228 148 GLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI----LEKIHLLWGENDKIFDMQ----- 218 (270)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~P~l~i~g~~D~~~~~~----- 218 (270)
........... ....+.. ...... ...+.....+. .+|+++++|++|.+++.+
T Consensus 175 ~~~~~~~~~~~-------~~~~~g~-~~~~~~----------~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~ 236 (280)
T 3ls2_A 175 NPINCPWGVKA-------FTGYLGA-DKTTWA----------QYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQN 236 (280)
T ss_dssp CGGGSHHHHHH-------HHHHHCS-CGGGTG----------GGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHH
T ss_pred CcccCcchhhH-------HHhhcCc-hHHHHH----------hcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHH
Confidence 54321110000 0000000 000000 00011111111 369999999999999862
Q ss_pred HHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 219 VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
..+.+.+.- .++++++++|++|.... -........+|+.+.
T Consensus 237 ~~~~l~~~g-~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~~ 277 (280)
T 3ls2_A 237 LVAVAKQKD-YPLTLEMQTGYDHSYFF--ISSFIDQHLVFHHQY 277 (280)
T ss_dssp HHHHHHHHT-CCEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-CCceEEEeCCCCCchhh--HHHHHHHHHHHHHHH
Confidence 233333333 37899999999998643 222344455666554
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=151.94 Aligned_cols=194 Identities=13% Similarity=0.083 Sum_probs=118.4
Q ss_pred CCeEEEE--EecCC--CCCCceEEEeCCCCCcccccHHHH---HHHhhcc-ceEEeecC--CCCCCCCCC----------
Q 024228 30 PGTILNI--WVPKK--TTKKHAVVLLHPFGFDGILTWQFQ---VLALAKT-YEVYVPDF--LFFGSSVTD---------- 89 (270)
Q Consensus 30 ~g~~l~~--~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~~-~~v~~~d~--~g~G~s~~~---------- 89 (270)
.|..+.+ +.+.. .++.|+||++||++++.. .|... .+.+++. |.|+++|+ ||+|.+...
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~ 104 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQ-NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAG 104 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCC
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcc
Confidence 5665554 44433 245689999999999988 77665 5667666 99999999 766543211
Q ss_pred ---CCC-C-------ChHHHHHHHHHHHH-HhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh
Q 024228 90 ---RPD-R-------TASFQAECMAKGLR-KLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN 155 (270)
Q Consensus 90 ---~~~-~-------~~~~~~~~~~~~l~-~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~ 155 (270)
... . ......+++..+++ .++ .++++++|||+||.+|+.+|.++|++++++++++|..........
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~~ 184 (282)
T 3fcx_A 105 FYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWG 184 (282)
T ss_dssp TTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGSHHH
T ss_pred cccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccCchh
Confidence 000 0 11234456666666 444 368999999999999999999999999999999987653321110
Q ss_pred Hhhhhccchhhhhhccc--ccHHHHHHHHHhhhhcCCCChhhhh---hhhheeeeEEEcCCCccCCHHH--HHHHHHHhc
Q 024228 156 AALERIGYESWVDFLLP--KTADALKVQFDIACYKLPTLPAFVY---KHILEKIHLLWGENDKIFDMQV--ARNLKEQVG 228 (270)
Q Consensus 156 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~ 228 (270)
... ....+.. .... ...+.... ....+|+++++|++|.++|... .+.+.+.+.
T Consensus 185 ~~~-------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~ 244 (282)
T 3fcx_A 185 KKA-------FSGYLGTDQSKWK-------------AYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACT 244 (282)
T ss_dssp HHH-------HHHHHC---CCGG-------------GGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHH
T ss_pred HHH-------HHHhcCCchhhhh-------------hcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHH
Confidence 000 0000000 0000 00011111 1224899999999999985433 223333322
Q ss_pred ---CCceEEEecCCCccee
Q 024228 229 ---QNATMESIEKAGHLVN 244 (270)
Q Consensus 229 ---~~~~~~~~~~~gH~~~ 244 (270)
.++++++++|++|...
T Consensus 245 ~~g~~~~~~~~~g~~H~~~ 263 (282)
T 3fcx_A 245 EKKIPVVFRLQEDYDHSYY 263 (282)
T ss_dssp HTTCCEEEEEETTCCSSHH
T ss_pred HcCCceEEEECCCCCcCHH
Confidence 3679999999999864
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-20 Score=157.18 Aligned_cols=233 Identities=12% Similarity=0.005 Sum_probs=147.1
Q ss_pred ceeEEEeecCCeEEEEEe--cCC---CCCCceEEEeCCCCCccc-ccHHHHH-HHhhcc-ceEEeecCCCCCCCCCCC--
Q 024228 21 MTQRTIEIEPGTILNIWV--PKK---TTKKHAVVLLHPFGFDGI-LTWQFQV-LALAKT-YEVYVPDFLFFGSSVTDR-- 90 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~--~~~---~~~~~~vv~~hG~~~~~~-~~~~~~~-~~l~~~-~~v~~~d~~g~G~s~~~~-- 90 (270)
.+...++..||.++.++. +.. .++.|+||++||+++... ..|.... +.|.++ |.|+.+|+||+|......
T Consensus 449 ~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~ 528 (711)
T 4hvt_A 449 LEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHK 528 (711)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHH
T ss_pred eEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHH
Confidence 345556667998887643 322 245799999999866544 2343333 466666 999999999998764211
Q ss_pred --CCCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc
Q 024228 91 --PDRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 91 --~~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
.........+|+.+.++.+ +.++++++|+|+||.+++.++.++|++++++|..+|............ .
T Consensus 529 ~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~----~ 604 (711)
T 4hvt_A 529 SAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGA----G 604 (711)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT----G
T ss_pred hhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhcccc----c
Confidence 1111223344555555443 336899999999999999999999999999999998776432111000 0
Q ss_pred chhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhe--eeeEEEcCCCccCCHHHHHHHHHHh-c---CCceEEEe
Q 024228 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE--KIHLLWGENDKIFDMQVARNLKEQV-G---QNATMESI 236 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~l~i~g~~D~~~~~~~~~~~~~~~-~---~~~~~~~~ 236 (270)
.......-.+........+.... +.....++.+ |+|+++|++|..||+..+.++.+.+ . ..++++++
T Consensus 605 ~~~~~~~G~p~~~~~~~~l~~~S-------P~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~ 677 (711)
T 4hvt_A 605 HSWVTEYGDPEIPNDLLHIKKYA-------PLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLES 677 (711)
T ss_dssp GGGHHHHCCTTSHHHHHHHHHHC-------GGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred hHHHHHhCCCcCHHHHHHHHHcC-------HHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEE
Confidence 00000111111111111111111 1111223334 9999999999999999999999988 4 35789999
Q ss_pred cCCCcceeec--chHhHHHHHHHHHHhhhh
Q 024228 237 EKAGHLVNLE--RPFVYNRQLKTILASLVH 264 (270)
Q Consensus 237 ~~~gH~~~~~--~~~~~~~~i~~fl~~~~~ 264 (270)
+++||.+... +.......+.+||.+...
T Consensus 678 p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 678 KDSGHGSGSDLKESANYFINLYTFFANALK 707 (711)
T ss_dssp SSCCSSSCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcCcCCcchHHHHHHHHHHHHHHHhC
Confidence 9999987542 334556678899987754
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-22 Score=154.02 Aligned_cols=197 Identities=15% Similarity=0.069 Sum_probs=128.2
Q ss_pred CCceEEEeCCCCCccccc-HH-HHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc
Q 024228 44 KKHAVVLLHPFGFDGILT-WQ-FQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~-~~-~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S 120 (270)
.+++|||+||++++.. . |. .+.+.|.+. |.|+++|+||+|.++.. .+.+++.+.+..+++..+.++++|+|||
T Consensus 30 ~~~~VvllHG~~~~~~-~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~---~~~~~l~~~i~~~~~~~g~~~v~lVGhS 105 (317)
T 1tca_A 30 VSKPILLVPGTGTTGP-QSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ---VNTEYMVNAITALYAGSGNNKLPVLTWS 105 (317)
T ss_dssp CSSEEEEECCTTCCHH-HHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH---HHHHHHHHHHHHHHHHTTSCCEEEEEET
T ss_pred CCCeEEEECCCCCCcc-hhhHHHHHHHHHhCCCEEEEECCCCCCCCcHH---HHHHHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 4678999999999987 6 88 889999886 99999999999876421 2234555666666667777899999999
Q ss_pred hhHHHHHHHHhhCc---cccccEEEecccCCCCchhhhHhhhhcc--chhhhhhcccccHHHHHHHHHhhhhcCCCChhh
Q 024228 121 YGGMVGFKMAEMYP---DLVESMVVTCSVMGLTESVSNAALERIG--YESWVDFLLPKTADALKVQFDIACYKLPTLPAF 195 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (270)
|||.++..++..+| ++|+++|+++++....... ....... .......... ..+...+.. ....
T Consensus 106 ~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~---s~f~~~L~~---~~~~---- 173 (317)
T 1tca_A 106 QGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLA--GPLDALAVSAPSVWQQTTG---SALTTALRN---AGGL---- 173 (317)
T ss_dssp HHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGG--HHHHHTTCBCHHHHHTBTT---CHHHHHHHH---TTTT----
T ss_pred hhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcch--hhhhhhhhcCchHHhhCcC---cHHHHHHHh---cCCC----
Confidence 99999999988876 7899999999875432211 1100000 0000000000 001111110 0000
Q ss_pred hhhhhheeeeEEEcCCCccCCHHH--HHHHHHHhcCCceEEEe-------cCCCcceeecchHhHHHHHHHHHHh
Q 024228 196 VYKHILEKIHLLWGENDKIFDMQV--ARNLKEQVGQNATMESI-------EKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 196 ~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
...+|+++|+|+.|.++++.. .+.....++ +.+.+.+ ++.+|..+.++|+. ...|.+||+.
T Consensus 174 ---~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~-~a~~~~~~~~~~~~~~~gH~~~l~~p~~-~~~v~~~L~~ 243 (317)
T 1tca_A 174 ---TQIVPTTNLYSATDEIVQPQVSNSPLDSSYLF-NGKNVQAQAVCGPLFVIDHAGSLTSQFS-YVVGRSALRS 243 (317)
T ss_dssp ---BCSSCEEEEECTTCSSSCCCCSSSTTSTTCCB-TSEEEEHHHHHCTTCCCCTTHHHHBHHH-HHHHHHHHHC
T ss_pred ---CCCCCEEEEEeCCCCeECCccccccchhhhcc-CCccEEeeeccCCCCccCcccccCCHHH-HHHHHHHhcC
Confidence 013899999999999998655 222122233 3444443 47899999999885 5778999986
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=144.65 Aligned_cols=196 Identities=13% Similarity=0.119 Sum_probs=130.0
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~G 122 (270)
++++|+++||++++.. .|..+++.|.+.+.|+++|+||++ .+++++.+.++.+. .++++++|||||
T Consensus 21 ~~~~l~~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~~------------~~~~~~~~~i~~~~~~~~~~l~GhS~G 87 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGI-YFKDLALQLNHKAAVYGFHFIEED------------SRIEQYVSRITEIQPEGPYVLLGYSAG 87 (244)
T ss_dssp CSSEEEEECCTTCCGG-GGHHHHHHTTTTSEEEEECCCCST------------THHHHHHHHHHHHCSSSCEEEEEETHH
T ss_pred CCCCEEEECCCCCCHH-HHHHHHHHhCCCceEEEEcCCCHH------------HHHHHHHHHHHHhCCCCCEEEEEECHh
Confidence 4789999999999998 999999999877999999999873 34677788888875 568999999999
Q ss_pred HHHHHHHHhhC---ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHH---HHHHhhhhcCCCChhhh
Q 024228 123 GMVGFKMAEMY---PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALK---VQFDIACYKLPTLPAFV 196 (270)
Q Consensus 123 g~~a~~~a~~~---p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 196 (270)
|.+|+.+|.+. ++++.+++++++............. ......+.+.....+. ..+....... ..
T Consensus 88 g~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 157 (244)
T 2cb9_A 88 GNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTEN-----DDSAAYLPEAVRETVMQKKRCYQEYWAQL-----IN 157 (244)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC------------CCSCHHHHHHHTHHHHHHHHHHHHC-----CC
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccH-----HHHHHHhHHHHHHHHHHHHHHHHHHHHhh-----cc
Confidence 99999999876 4679999999876542110000000 0000000000000000 0000000000 01
Q ss_pred hhhhheeeeEEEcC--CCccCCHHHHHHHHHHhcCCceEEEecCCCc--ceeecchHhHHHHHHHHHHhhhh
Q 024228 197 YKHILEKIHLLWGE--NDKIFDMQVARNLKEQVGQNATMESIEKAGH--LVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 197 ~~~~~~P~l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
...+.+|+++++|+ +|.. +++....+.+..+.+.+++++++ || ++..++++.+.+.|.+||.+...
T Consensus 158 ~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~~~~~ 227 (244)
T 2cb9_A 158 EGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIILNILDKINS 227 (244)
T ss_dssp CSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHHTC--
T ss_pred CCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHhcCcc
Confidence 23455999999999 8874 44444445544444689999996 99 66557899999999999986643
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-21 Score=163.55 Aligned_cols=232 Identities=11% Similarity=0.034 Sum_probs=140.4
Q ss_pred eeEEEeecCCeEEEEEe--cCC---CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC---C
Q 024228 22 TQRTIEIEPGTILNIWV--PKK---TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR---P 91 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~--~~~---~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~---~ 91 (270)
+...+...+|.++.++. +.. ..+.|+||++||+.+... ..|......|.++ |.|+++|+||.|...... .
T Consensus 426 ~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 505 (693)
T 3iuj_A 426 EQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAG 505 (693)
T ss_dssp EEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTT
T ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhh
Confidence 44555666898886643 322 235789999999866444 3555555666666 999999999988654211 0
Q ss_pred -CCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 92 -DRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 92 -~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
........+|+.+.++.+ +.++++++|||+||++++.++.++|++++++|+.+|........... ....
T Consensus 506 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~----~~~~ 581 (693)
T 3iuj_A 506 TQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFT----AGTG 581 (693)
T ss_dssp SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSG----GGGG
T ss_pred hhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCC----Cchh
Confidence 011112234444444443 33689999999999999999999999999999999877643221100 0000
Q ss_pred hhhhhcccccHHH-HHHHHHhhhhcCCCChhhhhhh-hhee-eeEEEcCCCccCCHHHHHHHHHHhc------CCceEEE
Q 024228 165 SWVDFLLPKTADA-LKVQFDIACYKLPTLPAFVYKH-ILEK-IHLLWGENDKIFDMQVARNLKEQVG------QNATMES 235 (270)
Q Consensus 165 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~ 235 (270)
.....-.+..... +..+.... +...+.. +.+| +|+++|++|..||+..+.++.+.+. ..+++++
T Consensus 582 ~~~~~g~p~~~~~~~~~~~~~s-------p~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 654 (693)
T 3iuj_A 582 WAYDYGTSADSEAMFDYLKGYS-------PLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRI 654 (693)
T ss_dssp CHHHHCCTTSCHHHHHHHHHHC-------HHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEE
T ss_pred HHHHcCCccCHHHHHHHHHhcC-------HHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEE
Confidence 0000111111111 11111111 1112222 3465 9999999999999999988888775 1457899
Q ss_pred ecCCCcceee--cchHhHHHHHHHHHHhhhh
Q 024228 236 IEKAGHLVNL--ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 236 ~~~~gH~~~~--~~~~~~~~~i~~fl~~~~~ 264 (270)
++++||.+.. ++..+....+.+||.+...
T Consensus 655 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 655 ETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 685 (693)
T ss_dssp EC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCCCcccHHHHHHHHHHHHHHHHHHcC
Confidence 9999999865 4566777889999987754
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-21 Score=146.21 Aligned_cols=212 Identities=11% Similarity=0.076 Sum_probs=127.3
Q ss_pred CCeEEEE--EecCC--CCCCceEEEeCCCCCcccccHHH---HHHHhhcc-ceEEeecCCCCC--------------CCC
Q 024228 30 PGTILNI--WVPKK--TTKKHAVVLLHPFGFDGILTWQF---QVLALAKT-YEVYVPDFLFFG--------------SSV 87 (270)
Q Consensus 30 ~g~~l~~--~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~G--------------~s~ 87 (270)
.|..+.+ +.+.. ..+.|+||++||++++.. .|.. +...+.+. +.|+++|.+++| .+.
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~ 110 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQ-NFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGF 110 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSH-HHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCT
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcc
Confidence 5666554 44443 345689999999999888 7743 34555555 999999986433 221
Q ss_pred CCCCC-------CC-hHHHHHHHHHHHHHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh
Q 024228 88 TDRPD-------RT-ASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 88 ~~~~~-------~~-~~~~~~~~~~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
..... .. .+...+++..+++.. ..++++|+|||+||.+|+.+|.++|++++++++++|............
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~~~~ 190 (283)
T 4b6g_A 111 YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVPWGEK 190 (283)
T ss_dssp TSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSHHHHH
T ss_pred cccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCcchhh
Confidence 11110 11 334456777777776 336899999999999999999999999999999998765332111000
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhh--heeeeEEEcCCCccCCHHH-HHHHHHHh---cCCc
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI--LEKIHLLWGENDKIFDMQV-ARNLKEQV---GQNA 231 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~-~~~~~~~~---~~~~ 231 (270)
. ....+.. ...... ...+.....+. .+|+++++|+.|.+++... .+.+.+.+ ..++
T Consensus 191 ~-------~~~~~g~-~~~~~~----------~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~ 252 (283)
T 4b6g_A 191 A-------FTAYLGK-DREKWQ----------QYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPV 252 (283)
T ss_dssp H-------HHHHHCS-CGGGGG----------GGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCC
T ss_pred h-------HHhhcCC-chHHHH----------hcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCc
Confidence 0 0000000 000000 00011111111 1599999999999987621 33433333 2368
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++++++|++|.... -........+|+.+.
T Consensus 253 ~~~~~~g~~H~~~~--~~~~l~~~l~~~~~~ 281 (283)
T 4b6g_A 253 DVRFHKGYDHSYYF--IASFIGEHIAYHAAF 281 (283)
T ss_dssp EEEEETTCCSSHHH--HHHHHHHHHHHHHTT
T ss_pred eEEEeCCCCcCHhH--HHHHHHHHHHHHHHh
Confidence 99999999998632 223445556666543
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-20 Score=148.85 Aligned_cols=192 Identities=17% Similarity=0.137 Sum_probs=130.0
Q ss_pred ceeEEEeec-CCeEEEEEecCC-----CCCCceEEEeCCCCCcccccH--HHH----------HHHhhcc-ceEEeecCC
Q 024228 21 MTQRTIEIE-PGTILNIWVPKK-----TTKKHAVVLLHPFGFDGILTW--QFQ----------VLALAKT-YEVYVPDFL 81 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~~~~--~~~----------~~~l~~~-~~v~~~d~~ 81 (270)
++...+... +|..+.++...+ ..+.|+||++||++++.. .+ ..+ ....... +.++++|.+
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~ 222 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGT-DNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCP 222 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSS-SSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCC
T ss_pred ccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCC-chhhhhhccccceeecCccccccCCEEEEEecCC
Confidence 445556666 788887754433 234589999999987654 21 111 1112233 789999999
Q ss_pred CCCCCCCCCC--------CCChHHHHHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc
Q 024228 82 FFGSSVTDRP--------DRTASFQAECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE 151 (270)
Q Consensus 82 g~G~s~~~~~--------~~~~~~~~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~ 151 (270)
|.+....... ....++..+.+..+++..+. ++++|+|||+||.+++.++.++|+++++++++++....
T Consensus 223 g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~-- 300 (380)
T 3doh_A 223 PNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV-- 300 (380)
T ss_dssp TTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG--
T ss_pred CCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh--
Confidence 8664332111 12334445555555566554 37999999999999999999999999999999987410
Q ss_pred hhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhc--
Q 024228 152 SVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL-EKIHLLWGENDKIFDMQVARNLKEQVG-- 228 (270)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 228 (270)
.....+. +|+|+++|++|..+|++.++.+.+.+.
T Consensus 301 -------------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 337 (380)
T 3doh_A 301 -------------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEI 337 (380)
T ss_dssp -------------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHT
T ss_pred -------------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHC
Confidence 0011122 799999999999999999888888775
Q ss_pred -CCceEEEecCC--------CcceeecchHhHH--HHHHHHHHhh
Q 024228 229 -QNATMESIEKA--------GHLVNLERPFVYN--RQLKTILASL 262 (270)
Q Consensus 229 -~~~~~~~~~~~--------gH~~~~~~~~~~~--~~i~~fl~~~ 262 (270)
.+.++++++++ +|.... ... +.+.+||.+.
T Consensus 338 g~~~~~~~~~~~~h~~h~~~~H~~~~----~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 338 GGKVRYTEYEKGFMEKHGWDPHGSWI----PTYENQEAIEWLFEQ 378 (380)
T ss_dssp TCCEEEEEECTTHHHHTTCCTTCTHH----HHHTCHHHHHHHHTC
T ss_pred CCceEEEEecCCcccCCCCCCchhHH----HhcCCHHHHHHHHhh
Confidence 35789999999 665322 222 3788888764
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-22 Score=145.59 Aligned_cols=199 Identities=17% Similarity=0.118 Sum_probs=128.0
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~G 122 (270)
++++|+++||++++.. .|..+.+.|.+ ++|+++|+||+|. .++++.+.++.+.. ++++++|||+|
T Consensus 16 ~~~~l~~~hg~~~~~~-~~~~~~~~l~~-~~v~~~d~~g~~~------------~~~~~~~~i~~~~~~~~~~l~G~S~G 81 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGL-MYQNLSSRLPS-YKLCAFDFIEEED------------RLDRYADLIQKLQPEGPLTLFGYSAG 81 (230)
T ss_dssp CSEEEEEECCTTCCGG-GGHHHHHHCTT-EEEEEECCCCSTT------------HHHHHHHHHHHHCCSSCEEEEEETHH
T ss_pred CCCCEEEECCCCCchH-HHHHHHHhcCC-CeEEEecCCCHHH------------HHHHHHHHHHHhCCCCCeEEEEECHh
Confidence 4689999999999998 99999999988 9999999998763 35677777777764 58999999999
Q ss_pred HHHHHHHHhhCc---cccccEEEecccCCCCchh-hhH----hhhhcc--chhhhhhcccccHHHHHHHHH-hhhhcCCC
Q 024228 123 GMVGFKMAEMYP---DLVESMVVTCSVMGLTESV-SNA----ALERIG--YESWVDFLLPKTADALKVQFD-IACYKLPT 191 (270)
Q Consensus 123 g~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~-~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 191 (270)
|.+|+.+|.+.+ +++++++++++........ ... ...... .........+.....+..... ...+...
T Consensus 82 g~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (230)
T 1jmk_C 82 CSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYVN- 160 (230)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhhhhhHHHHHHHHHHHHHHHHHhhh-
Confidence 999999998764 5799999998764321100 000 000000 000000000000001110000 0000000
Q ss_pred ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCc--ceeecchHhHHHHHHHHHHh
Q 024228 192 LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH--LVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 192 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~~~~~~~~~~~~i~~fl~~ 261 (270)
......+.+|+++++|++|..++ .....+.+....+.+++.+++ || ++..++++.+.+.|.+||.+
T Consensus 161 --~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 161 --LISTGQVKADIDLLTSGADFDIP-EWLASWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp --CCCCSCBSSEEEEEECSSCCCCC-TTEECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred --ccccccccccEEEEEeCCCCCCc-cccchHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHHHHHHHHHhh
Confidence 00123455899999999999887 233334444434678999997 99 77668889999999999864
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=147.50 Aligned_cols=97 Identities=16% Similarity=0.190 Sum_probs=84.4
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEch
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSY 121 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~ 121 (270)
.++++|||+||++++.. .|..+++.|. +.|+++|+++. ....+++++++++.+.++.+.. ++++|+||||
T Consensus 22 ~~~~~l~~~hg~~~~~~-~~~~~~~~L~--~~v~~~d~~~~------~~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS~ 92 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTT-VFHSLASRLS--IPTYGLQCTRA------APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSY 92 (283)
T ss_dssp SSSCCEEEECCTTCCSG-GGHHHHHHCS--SCEEEECCCTT------SCCSCHHHHHHHHHHHHTTTCCSSCCEEEEETH
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC--ceEEEEecCCC------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 35789999999999999 9999999997 99999999742 2346899999999999998864 7999999999
Q ss_pred hHHHHHHHHhhC---ccccc---cEEEecccCC
Q 024228 122 GGMVGFKMAEMY---PDLVE---SMVVTCSVMG 148 (270)
Q Consensus 122 Gg~~a~~~a~~~---p~~v~---~~i~~~~~~~ 148 (270)
||.+|+.+|.+. |+++. +++++++...
T Consensus 93 Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 93 GACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 999999999876 77888 9999988654
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-20 Score=142.75 Aligned_cols=118 Identities=18% Similarity=0.184 Sum_probs=82.5
Q ss_pred cCCeEEEEE--ecCC-CCCCceEEEeCCCCCcccccH-HHHHHHhhcc-ceEEeecCC------------CC--CCCCCC
Q 024228 29 EPGTILNIW--VPKK-TTKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFL------------FF--GSSVTD 89 (270)
Q Consensus 29 ~~g~~l~~~--~~~~-~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~------------g~--G~s~~~ 89 (270)
.+|..+.++ .+.. ..+.|+||++||++++.. .| ..+.+.+.+. |.|+++|+| |+ |.|...
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~ 113 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGA-DYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNP 113 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHH-HHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCB
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCC
Confidence 356666554 4443 245789999999999988 77 6677888776 999999999 55 666433
Q ss_pred CC--CCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCcc-ccccEEEecccC
Q 024228 90 RP--DRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVM 147 (270)
Q Consensus 90 ~~--~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~ 147 (270)
.. ....+++.+.+..+.+. ++.++++|+|||+||.+++.++.++|+ +++++|+.++..
T Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 114 RHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp CCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred CcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 21 12333332223333332 245789999999999999999999995 799999877443
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=165.88 Aligned_cols=235 Identities=11% Similarity=0.050 Sum_probs=142.8
Q ss_pred eeEEEeecCCeEEEEEe--cCC---CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC----C
Q 024228 22 TQRTIEIEPGTILNIWV--PKK---TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD----R 90 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~--~~~---~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~----~ 90 (270)
+...+...||..+.++. +.. .++.|+||++||+++... ..|......|+++ |.|+++|+||+|.+... .
T Consensus 481 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~ 560 (751)
T 2xe4_A 481 ERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIG 560 (751)
T ss_dssp EEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTT
T ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhcc
Confidence 44555666898887543 222 235689999999876544 2455566677766 99999999999875421 1
Q ss_pred CC-----CChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 91 PD-----RTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 91 ~~-----~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
.. ...+++.+.+..+++. .+.++++++|+|+||.+++.++.++|++++++|+.+|............. ....
T Consensus 561 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~-~~~~ 639 (751)
T 2xe4_A 561 AKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSI-PLTT 639 (751)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTS-TTHH
T ss_pred ccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccCc-ccch
Confidence 11 2233334444444443 24468999999999999999999999999999999887653211100000 0000
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee-eeEEEcCCCccCCHHHHHHHHHHhcC---Cc---eEEEe
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK-IHLLWGENDKIFDMQVARNLKEQVGQ---NA---TMESI 236 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~---~~---~~~~~ 236 (270)
..+...-.+........+.... +...+..+.+| +|+++|++|..||+..+.++.+.+.. .. .+.++
T Consensus 640 ~~~~~~g~p~~~~~~~~~~~~s-------p~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~ 712 (751)
T 2xe4_A 640 GEWEEWGNPNEYKYYDYMLSYS-------PMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNID 712 (751)
T ss_dssp HHTTTTCCTTSHHHHHHHHHHC-------TGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEE
T ss_pred hhHHHcCCCCCHHHHHHHHhcC-------hhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEEC
Confidence 0000000111111111111111 11122233465 99999999999999999888887751 12 34455
Q ss_pred cCCCcceeecchH--hHHHHHHHHHHhhhh
Q 024228 237 EKAGHLVNLERPF--VYNRQLKTILASLVH 264 (270)
Q Consensus 237 ~~~gH~~~~~~~~--~~~~~i~~fl~~~~~ 264 (270)
+++||....+.++ .....+.+||.+...
T Consensus 713 ~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 713 MESGHFSAKDRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp TTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCChhHHHHHHHHHHHHHHHHhC
Confidence 9999998765443 345578899987654
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=148.01 Aligned_cols=177 Identities=19% Similarity=0.156 Sum_probs=122.4
Q ss_pred CCCCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCC------CCCCCCCCC---CCC-------ChHHHHHH
Q 024228 41 KTTKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFL------FFGSSVTDR---PDR-------TASFQAEC 101 (270)
Q Consensus 41 ~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~------g~G~s~~~~---~~~-------~~~~~~~~ 101 (270)
+.+..|.||++||+|++.. .|..+++.|... +.+++++-| |.|.+-... ... ......++
T Consensus 62 ~~~~~plVI~LHG~G~~~~-~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~ 140 (285)
T 4fhz_A 62 PGEATSLVVFLHGYGADGA-DLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARD 140 (285)
T ss_dssp TTCCSEEEEEECCTTBCHH-HHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEEcCCCCCHH-HHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHH
Confidence 3345688999999999988 898888888765 677777643 334321110 000 11122334
Q ss_pred HHHHHHH----hC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccH
Q 024228 102 MAKGLRK----LG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (270)
Q Consensus 102 ~~~~l~~----~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
+.++++. .+ .++++++|+|+||.+++.++.++|+++.++|.+++........
T Consensus 141 l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~---------------------- 198 (285)
T 4fhz_A 141 LDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERL---------------------- 198 (285)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHH----------------------
T ss_pred HHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhh----------------------
Confidence 4444443 33 4689999999999999999999999999999988654321100
Q ss_pred HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHH
Q 024228 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYN 252 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~ 252 (270)
... ....+|++++||++|++||.+.++++.+.+. .+++++++++.||... +++ .
T Consensus 199 -------~~~------------~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~-l 255 (285)
T 4fhz_A 199 -------AEE------------ARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDG-L 255 (285)
T ss_dssp -------HHH------------CCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHH-H
T ss_pred -------hhh------------hhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHH-H
Confidence 000 0011799999999999999999888877765 3578999999999863 333 4
Q ss_pred HHHHHHHHhhh
Q 024228 253 RQLKTILASLV 263 (270)
Q Consensus 253 ~~i~~fl~~~~ 263 (270)
+.+.+||++..
T Consensus 256 ~~~~~fL~~~L 266 (285)
T 4fhz_A 256 SVALAFLKERL 266 (285)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHC
Confidence 67889998765
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-21 Score=148.54 Aligned_cols=102 Identities=14% Similarity=0.042 Sum_probs=81.3
Q ss_pred CCceEEEeCCCCCcc---cccHHHHHHHhhccc---eEEeecCCCCCCCCCCCC--CCChHHHHHHHHHHHHHhC--CCc
Q 024228 44 KKHAVVLLHPFGFDG---ILTWQFQVLALAKTY---EVYVPDFLFFGSSVTDRP--DRTASFQAECMAKGLRKLG--VEK 113 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~---~~~~~~~~~~l~~~~---~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~l~~~~--~~~ 113 (270)
..++||++||++++. . .|..+.+.|++.+ .|+++|+ |||.|..... ..+....++++.+.++.+. .++
T Consensus 4 ~~~pvVllHG~~~~~~~~~-~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 81 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPL-SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQG 81 (279)
T ss_dssp SSCCEEEECCTTCCSCCTT-TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTC
T ss_pred CCCcEEEECCCCCCCCCcc-cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCC
Confidence 356799999999987 6 8999999998754 9999998 9998752211 1356666777776666532 168
Q ss_pred eEEEEEchhHHHHHHHHhhCcc-ccccEEEecccC
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVM 147 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~ 147 (270)
+.++||||||.++..++.++|+ +|+++|+++++.
T Consensus 82 ~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 82 YNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 9999999999999999999998 499999998754
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7e-20 Score=138.71 Aligned_cols=202 Identities=14% Similarity=0.120 Sum_probs=126.0
Q ss_pred ceeEEEeec-CCeEEEE--EecCC---CCCCceEEEeCCCCCcccccHHH-------HHHHhhc-----cceEEeecCCC
Q 024228 21 MTQRTIEIE-PGTILNI--WVPKK---TTKKHAVVLLHPFGFDGILTWQF-------QVLALAK-----TYEVYVPDFLF 82 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~--~~~~~---~~~~~~vv~~hG~~~~~~~~~~~-------~~~~l~~-----~~~v~~~d~~g 82 (270)
++...+... +|..+.+ +.+.. ..+.|+||++||++++.. .|.. +++.|.+ .+.|+++|+++
T Consensus 32 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~ 110 (268)
T 1jjf_A 32 VVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSEN-DWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA 110 (268)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTT-TTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC
T ss_pred EEEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcc-hhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCC
Confidence 334444433 4555544 44443 245689999999998776 5543 3566654 39999999998
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHH-hC----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh
Q 024228 83 FGSSVTDRPDRTASFQAECMAKGLRK-LG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 83 ~G~s~~~~~~~~~~~~~~~~~~~l~~-~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
++.+.........++.++++..+++. ++ .++++++|||+||.+++.++.++|+++++++++++........ .
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~--~- 187 (268)
T 1jjf_A 111 AGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNE--R- 187 (268)
T ss_dssp CCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHH--H-
T ss_pred CCccccccHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCchh--h-
Confidence 87542110000112224455555553 33 3689999999999999999999999999999999865432100 0
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhe-eeeEEEcCCCccCCHHHHHHHHHHhc---CCceE
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE-KIHLLWGENDKIFDMQVARNLKEQVG---QNATM 233 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~ 233 (270)
.+ ..... ...... |+++++|++|.+++. .+.+.+.+. .++++
T Consensus 188 -----------~~-~~~~~--------------------~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~ 233 (268)
T 1jjf_A 188 -----------LF-PDGGK--------------------AAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVY 233 (268)
T ss_dssp -----------HC-TTTTH--------------------HHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEE
T ss_pred -----------hc-Ccchh--------------------hhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEE
Confidence 00 00000 001114 599999999999874 444554443 36799
Q ss_pred EEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 234 ESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+++++++|..... ......+.+||.+.
T Consensus 234 ~~~~g~~H~~~~~--~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 234 WLIQGGGHDFNVW--KPGLWNFLQMADEA 260 (268)
T ss_dssp EEETTCCSSHHHH--HHHHHHHHHHHHHH
T ss_pred EEcCCCCcCHhHH--HHHHHHHHHHHHhc
Confidence 9999999987422 23345677777665
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-19 Score=152.99 Aligned_cols=198 Identities=10% Similarity=0.034 Sum_probs=125.8
Q ss_pred HHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC--------------------CceEEEEEchhHH
Q 024228 66 VLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV--------------------EKCTLVGVSYGGM 124 (270)
Q Consensus 66 ~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~--------------------~~~~l~G~S~Gg~ 124 (270)
...|+++ |.|+++|+||+|.|++....... ..++|+.++++.+.. ++++++|||+||.
T Consensus 274 ~~~la~~GYaVv~~D~RG~G~S~G~~~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ 352 (763)
T 1lns_A 274 NDYFLTRGFASIYVAGVGTRSSDGFQTSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGT 352 (763)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSCCCTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHH
T ss_pred HHHHHHCCCEEEEECCCcCCCCCCcCCCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHH
Confidence 4667777 99999999999999876544443 567888888888762 3799999999999
Q ss_pred HHHHHHhhCccccccEEEecccCCCCchhhhH-------hhhhccch-----hhhhhcccccH----HHHHHHHHhh---
Q 024228 125 VGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-------ALERIGYE-----SWVDFLLPKTA----DALKVQFDIA--- 185 (270)
Q Consensus 125 ~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~-------~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~--- 185 (270)
+++.+|...|++++++|..++........... ........ ........... ..........
T Consensus 353 ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 432 (763)
T 1lns_A 353 MAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAA 432 (763)
T ss_dssp HHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999998875321100000 00000000 00000000000 0000000000
Q ss_pred hh-cC--------CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEEEecCCCcceeec-chHhHHHH
Q 024228 186 CY-KL--------PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLE-RPFVYNRQ 254 (270)
Q Consensus 186 ~~-~~--------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~-~~~~~~~~ 254 (270)
.. .. ...+...+.++.+|+|+++|.+|..+|+..+.++++.++. .....++.+++|..+.+ .+..+.+.
T Consensus 433 ~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~~gH~~~~~~~~~~~~~~ 512 (763)
T 1lns_A 433 LDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFSET 512 (763)
T ss_dssp HCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHHHH
T ss_pred hhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeCCcccCccccchHHHHHH
Confidence 00 00 1112334556679999999999999999999999999872 23344556789998654 45567888
Q ss_pred HHHHHHhhhh
Q 024228 255 LKTILASLVH 264 (270)
Q Consensus 255 i~~fl~~~~~ 264 (270)
+.+||++...
T Consensus 513 i~~Ffd~~Lk 522 (763)
T 1lns_A 513 INAYFVAKLL 522 (763)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 8888887654
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.4e-20 Score=135.50 Aligned_cols=178 Identities=14% Similarity=0.140 Sum_probs=120.9
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCCC--------------CCCCCCC-------CCCChHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFF--------------GSSVTDR-------PDRTASFQ 98 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~--------------G~s~~~~-------~~~~~~~~ 98 (270)
+.+.+|||+||+|++.. .|..+++.|... +.+++++-|-. ....... ........
T Consensus 35 ~~~~~VI~LHG~G~~~~-dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~ 113 (246)
T 4f21_A 35 QARFCVIWLHGLGADGH-DFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSS 113 (246)
T ss_dssp CCCEEEEEEEC--CCCC-CGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHH
T ss_pred cCCeEEEEEcCCCCCHH-HHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHH
Confidence 45679999999999998 888888887653 77888765421 1110000 01223334
Q ss_pred HHHHHHHHHH-----hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 99 AECMAKGLRK-----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 99 ~~~~~~~l~~-----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
++.+..+++. ++.++++++|+|+||.+++.++.++|+++.+++.+++..+........ . .
T Consensus 114 ~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~~~~----~---------~-- 178 (246)
T 4f21_A 114 IAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFKGK----I---------T-- 178 (246)
T ss_dssp HHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHHSTT----C---------C--
T ss_pred HHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcccccccc----c---------c--
Confidence 4445555543 245689999999999999999999999999999998765422111000 0 0
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHh
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFV 250 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~ 250 (270)
.....+|++++||++|++||.+.+++..+.+. .+.++++++|.||... +++
T Consensus 179 -----------------------~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~ 232 (246)
T 4f21_A 179 -----------------------SINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEE 232 (246)
T ss_dssp -----------------------GGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHH
T ss_pred -----------------------ccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHH
Confidence 00011799999999999999999988888775 2568899999999764 333
Q ss_pred HHHHHHHHHHhhh
Q 024228 251 YNRQLKTILASLV 263 (270)
Q Consensus 251 ~~~~i~~fl~~~~ 263 (270)
.+.+.+||++..
T Consensus 233 -l~~~~~fL~k~l 244 (246)
T 4f21_A 233 -IKDISNFIAKTF 244 (246)
T ss_dssp -HHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHh
Confidence 467889998764
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=8.1e-21 Score=151.08 Aligned_cols=175 Identities=17% Similarity=0.092 Sum_probs=121.5
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-----------------C---C--------CC
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-----------------P---D--------RT 94 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-----------------~---~--------~~ 94 (270)
+.|+||++||++++.. .|..+++.|+++ |.|+++|+||+|.|.... . . ..
T Consensus 97 ~~P~Vv~~HG~~~~~~-~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 175 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRT-LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQ 175 (383)
T ss_dssp CEEEEEEECCTTCCTT-TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCch-HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHH
Confidence 5688999999999988 999999999988 999999999998874210 0 0 01
Q ss_pred hHHHHHHHHHHHHHh--------------------------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 95 ASFQAECMAKGLRKL--------------------------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.+..++|+..+++.+ +.++++++|||+||.+++.++...+ +++++|++++...
T Consensus 176 ~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~~ 254 (383)
T 3d59_A 176 VRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWMF 254 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCT
T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCccC
Confidence 112245665555443 2347999999999999999988876 5999999987542
Q ss_pred CCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 149 LTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
... ...+..+.+|+|+++|++|..++ ..+.+.+...
T Consensus 255 p~~------------------------------------------~~~~~~i~~P~Lii~g~~D~~~~--~~~~~~~l~~ 290 (383)
T 3d59_A 255 PLG------------------------------------------DEVYSRIPQPLFFINSEYFQYPA--NIIKMKKCYS 290 (383)
T ss_dssp TCC------------------------------------------GGGGGSCCSCEEEEEETTTCCHH--HHHHHHTTCC
T ss_pred CCc------------------------------------------hhhhccCCCCEEEEecccccchh--hHHHHHHHHh
Confidence 100 00112333899999999998542 2333322211
Q ss_pred --CCceEEEecCCCcceeec-------------------ch----HhHHHHHHHHHHhhhh
Q 024228 229 --QNATMESIEKAGHLVNLE-------------------RP----FVYNRQLKTILASLVH 264 (270)
Q Consensus 229 --~~~~~~~~~~~gH~~~~~-------------------~~----~~~~~~i~~fl~~~~~ 264 (270)
...+++++++++|..+.+ ++ +.+.+.+.+||++...
T Consensus 291 ~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~ 351 (383)
T 3d59_A 291 PDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLG 351 (383)
T ss_dssp TTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence 367899999999987432 23 3344578899988764
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.6e-20 Score=145.57 Aligned_cols=105 Identities=18% Similarity=0.056 Sum_probs=74.8
Q ss_pred CCCceEEEeCCCCCccccc-----------HHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCC--------ChHHHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILT-----------WQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR--------TASFQAECM 102 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~-----------~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~--------~~~~~~~~~ 102 (270)
++.|+||++||++++.. . |..++..|.++ |.|+++|+||+|.|......+ ...+.+.++
T Consensus 77 ~~~P~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~ 155 (397)
T 3h2g_A 77 GPYPLLGWGHPTEALRA-QEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAA 155 (397)
T ss_dssp SCEEEEEEECCCCCBTT-CCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCCC-cccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHH
Confidence 34688999999998765 4 55677788777 999999999999986443222 233445555
Q ss_pred HHHHHHhCC---CceEEEEEchhHHHHHHHHhh-Ccc-----ccccEEEecccCC
Q 024228 103 AKGLRKLGV---EKCTLVGVSYGGMVGFKMAEM-YPD-----LVESMVVTCSVMG 148 (270)
Q Consensus 103 ~~~l~~~~~---~~~~l~G~S~Gg~~a~~~a~~-~p~-----~v~~~i~~~~~~~ 148 (270)
..+++.++. ++++++|||+||.+++.++.. .++ .+.+++..+++..
T Consensus 156 ~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 156 RSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp HHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred HHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 666777766 689999999999999888733 221 4566666555443
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-18 Score=135.41 Aligned_cols=231 Identities=13% Similarity=0.090 Sum_probs=131.2
Q ss_pred EEecCCC-CCCceEEEeCCCCCccc--cc-----HHHHHHHhh-cc-ceEEeecCCCCCCCCCCCCCC-ChHH----H--
Q 024228 36 IWVPKKT-TKKHAVVLLHPFGFDGI--LT-----WQFQVLALA-KT-YEVYVPDFLFFGSSVTDRPDR-TASF----Q-- 98 (270)
Q Consensus 36 ~~~~~~~-~~~~~vv~~hG~~~~~~--~~-----~~~~~~~l~-~~-~~v~~~d~~g~G~s~~~~~~~-~~~~----~-- 98 (270)
++.+... .+.|.|++.||...... .. -..++..|+ ++ |.|+++|+||+|.|......+ .... +
T Consensus 64 l~~P~~~~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D 143 (377)
T 4ezi_A 64 VAMPIHPVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSID 143 (377)
T ss_dssp EEEESSCSSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHH
T ss_pred EEECCCCCCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHH
Confidence 4555543 45688999999985322 00 012344555 55 999999999999998632222 2211 1
Q ss_pred -HHHHHHHHHHhCC---CceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHh------------
Q 024228 99 -AECMAKGLRKLGV---EKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAA------------ 157 (270)
Q Consensus 99 -~~~~~~~l~~~~~---~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~------------ 157 (270)
+.++..+++.++. ++++++|||+||.+++.+|...|+ .+.+.+..+++...........
T Consensus 144 ~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g 223 (377)
T 4ezi_A 144 MLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLA 223 (377)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHH
T ss_pred HHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHH
Confidence 2222334444443 689999999999999999987654 4778888877765432110000
Q ss_pred hhhcc-------chhhhhhcccccHHHHHHHHH---------------------hh----hhc-CCCChhhhhh------
Q 024228 158 LERIG-------YESWVDFLLPKTADALKVQFD---------------------IA----CYK-LPTLPAFVYK------ 198 (270)
Q Consensus 158 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~---------------------~~----~~~-~~~~~~~~~~------ 198 (270)
+.... .......+.+.....+..... .. ... ....-...++
T Consensus 224 ~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~ 303 (377)
T 4ezi_A 224 YFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINFNHYD 303 (377)
T ss_dssp HHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchHHHHHHHHhcccC
Confidence 00000 000111111111111111100 00 000 0000000111
Q ss_pred -hhheeeeEEEcCCCccCCHHHHHHHHHHhcC-C-ceEEEecC--CCcceeecchHhHHHHHHHHHHhhhhhccCC
Q 024228 199 -HILEKIHLLWGENDKIFDMQVARNLKEQVGQ-N-ATMESIEK--AGHLVNLERPFVYNRQLKTILASLVHANGQH 269 (270)
Q Consensus 199 -~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~-~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~~~~~~~~~~ 269 (270)
...+|+++++|++|.++|.+.++.+.+.+.. + ++++.+++ .+|... .......+.+||++...++.-|
T Consensus 304 ~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~~~~~~~H~~~---~~~~~~~~~~wl~~~~~~~~~~ 376 (377)
T 4ezi_A 304 FKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKSVSDALDHVQA---HPFVLKEQVDFFKQFERQEAMN 376 (377)
T ss_dssp SCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEESCSSCCTTTT---HHHHHHHHHHHHHHHHTSSCCC
T ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEcCCCCCCccCh---HHHHHHHHHHHHHHhhcchhcc
Confidence 1128999999999999999999999888751 1 78999998 788653 3446677888998877655443
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.3e-20 Score=140.07 Aligned_cols=199 Identities=14% Similarity=0.050 Sum_probs=125.3
Q ss_pred CCCceEEEeCCCCCcc-cccHH-HHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEE
Q 024228 43 TKKHAVVLLHPFGFDG-ILTWQ-FQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~-~~~~~-~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~ 119 (270)
..+++||++||++++. . .|. .+.+.|.+. |.|+++|+||||.++. ..+.+++.+.+.++++..+.++++|+||
T Consensus 63 ~~~~pVVLvHG~~~~~~~-~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~---~~~~~~la~~I~~l~~~~g~~~v~LVGH 138 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGPQ-SFDSNWIPLSAQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITTLYAGSGNNKLPVLTW 138 (316)
T ss_dssp BCSSEEEEECCTTCCHHH-HHTTTHHHHHHHTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCCeEEEECCCCCCcHH-HHHHHHHHHHHHCCCeEEEecCCCCCCCcH---HHHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 3578999999999987 5 887 899999887 9999999999997642 1234556666777777778899999999
Q ss_pred chhHHHHHHHHhhC---ccccccEEEecccCCCCchhhhHhhhhcc--chhhhhhcccccHHHHHHHHHhhhhcCCCChh
Q 024228 120 SYGGMVGFKMAEMY---PDLVESMVVTCSVMGLTESVSNAALERIG--YESWVDFLLPKTADALKVQFDIACYKLPTLPA 194 (270)
Q Consensus 120 S~Gg~~a~~~a~~~---p~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (270)
||||.++..++..+ +++|+++|+++++....... .....+. .....+. ... . .++..........+
T Consensus 139 SmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt~~a--~l~~~~~~~~~a~~q~-~~g--S---~fl~~Ln~~~~~~~- 209 (316)
T 3icv_A 139 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLA--GPLDALAVSAPSVWQQ-TTG--S---ALTTALRNAGGLTQ- 209 (316)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBSCC--------CCCCHHHHHT-BTT--C---HHHHHHHHTTTTBC-
T ss_pred CHHHHHHHHHHHhccccchhhceEEEECCCCCCchhh--hhhhhccccChhHHhh-CCC--C---HHHHHHhhcCCCCC-
Confidence 99999998777765 47999999999876533211 1100000 0000010 000 0 11111100000000
Q ss_pred hhhhhhheeeeEEEcCCCccCCHHH--HHHHHHHhcCCceEEEec-------CCCcceeecchHhHHHHHHHHHHhh
Q 024228 195 FVYKHILEKIHLLWGENDKIFDMQV--ARNLKEQVGQNATMESIE-------KAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 195 ~~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.+|+..|++..|.+|.+.. ...-...++ ..+-+.+. ..+|..+.-+|. +...+.+.|...
T Consensus 210 ------~v~~tsI~S~~D~iV~P~~~~g~~as~~L~-g~~Ni~vqd~Cp~~~~~~H~~~~~dp~-v~~~V~~aL~~~ 278 (316)
T 3icv_A 210 ------IVPTTNLYSATDEIVQPQVSNSPLDSSYLF-NGKNVQAQAVCGPLFVIDHAGSLTSQF-SYVVGRSALRST 278 (316)
T ss_dssp ------SSCEEEEECTTCSSSCCCCSSSTTSTTCCB-TSEEEEHHHHHCTTCCCCTTHHHHBHH-HHHHHHHHHHCT
T ss_pred ------CCcEEEEEcCCCCCccCCcccCcccceecC-CCceEEEeccCCCCCccCCcCccCCHH-HHHHHHHHhccC
Confidence 1789999999999985543 000011233 34555552 578999887776 456667777644
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-17 Score=128.25 Aligned_cols=233 Identities=12% Similarity=0.034 Sum_probs=134.1
Q ss_pred CceeEEEeec-CCeEEEEEecCCCCCCceEEEeCCC--CCcccccHHHH---HHHhhcc-ceEEeecCCCC-CCCCCCCC
Q 024228 20 GMTQRTIEIE-PGTILNIWVPKKTTKKHAVVLLHPF--GFDGILTWQFQ---VLALAKT-YEVYVPDFLFF-GSSVTDRP 91 (270)
Q Consensus 20 ~~~~~~i~~~-~g~~l~~~~~~~~~~~~~vv~~hG~--~~~~~~~~~~~---~~~l~~~-~~v~~~d~~g~-G~s~~~~~ 91 (270)
.++...+..+ .|..+.++.+....+.|+||++||+ +++.. .|... .+.+.+. +.|+++|.++. +.++....
T Consensus 8 ~v~~~~~~S~~~~~~i~v~~~p~~~~~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~ 86 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFS-GWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQP 86 (304)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCSTTBCEEEEECCTTCCSSSC-HHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSC
T ss_pred eEEEEEEECccCCCceEEEECCCCCCCCEEEEeCCCCCCCCcc-hhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCc
Confidence 4556666654 4667776644332567899999999 55666 77654 3556665 99999998764 22221111
Q ss_pred --------CCChHHH-HHHHHHHHHH-hCCC--ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh
Q 024228 92 --------DRTASFQ-AECMAKGLRK-LGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 92 --------~~~~~~~-~~~~~~~l~~-~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
....+.+ ++++..++++ ++.. +++|+|+||||.+|+.++.++|+++++++++++..............
T Consensus 87 ~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~ 166 (304)
T 1sfr_A 87 ACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIG 166 (304)
T ss_dssp EEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchhhhhh
Confidence 2344444 4788888876 5544 89999999999999999999999999999999876543211000000
Q ss_pred h----ccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCc--------------cCCHHHHH
Q 024228 160 R----IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDK--------------IFDMQVAR 221 (270)
Q Consensus 160 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~--------------~~~~~~~~ 221 (270)
. .........+..... ..+.. .........+..-..|+++.+|++|. .++.+..+
T Consensus 167 ~~~~~~~~~~~~~~~g~~~~---~~~~~----~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~ 239 (304)
T 1sfr_A 167 LAMGDAGGYKASDMWGPKED---PAWQR----NDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNI 239 (304)
T ss_dssp HHHHHTTSCCHHHHHCSTTS---THHHH----SCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHH
T ss_pred HhhhhccccchHHhcCCcch---hhhHh----cCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHH
Confidence 0 000000000000000 00000 00000000110113799999999998 55677777
Q ss_pred HHHHHhc----CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 222 NLKEQVG----QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 222 ~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.+.+.+. .++++.++++++|.... -......+..||.+.
T Consensus 240 ~~~~~L~~~G~~~v~~~~~~~g~H~~~~--w~~~l~~~l~~l~~~ 282 (304)
T 1sfr_A 240 KFQDAYNAGGGHNGVFDFPDSGTHSWEY--WGAQLNAMKPDLQRA 282 (304)
T ss_dssp HHHHHHHHTTCCSEEEECCSCCCSSHHH--HHHHHHHTHHHHHHH
T ss_pred HHHHHHHhCCCCceEEEecCCCccCHHH--HHHHHHHHHHHHHHh
Confidence 7777654 24667777667997532 112223445555544
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.8e-19 Score=118.45 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=84.4
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
...+.. +|.+++|...++ +|+||++| ++.. .|..+ |++.|+|+++|+||||.|...... .+++++++
T Consensus 4 ~~~~~~-~g~~~~~~~~g~---~~~vv~~H---~~~~-~~~~~---l~~~~~v~~~d~~G~G~s~~~~~~--~~~~~~~~ 70 (131)
T 2dst_A 4 AGYLHL-YGLNLVFDRVGK---GPPVLLVA---EEAS-RWPEA---LPEGYAFYLLDLPGYGRTEGPRMA--PEELAHFV 70 (131)
T ss_dssp EEEEEE-TTEEEEEEEECC---SSEEEEES---SSGG-GCCSC---CCTTSEEEEECCTTSTTCCCCCCC--HHHHHHHH
T ss_pred eEEEEE-CCEEEEEEEcCC---CCeEEEEc---CCHH-HHHHH---HhCCcEEEEECCCCCCCCCCCCCC--HHHHHHHH
Confidence 345555 799999987765 68999999 4445 66655 766699999999999999876544 88999999
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhCcc
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD 135 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 135 (270)
.++++.++.++++++|||+||.+++.+|.++|.
T Consensus 71 ~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 71 AGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999884
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-20 Score=149.78 Aligned_cols=155 Identities=12% Similarity=0.114 Sum_probs=113.8
Q ss_pred CCCceEEEeCCCCCcc-cccHHH-HHHHhhc--cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----C--CC
Q 024228 43 TKKHAVVLLHPFGFDG-ILTWQF-QVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----G--VE 112 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~-~~~~~~-~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~--~~ 112 (270)
+++|+||++||++++. . .|.. +.+.|.+ .|+|+++|+||+|.|.......+.+.+++|+.++++.+ + .+
T Consensus 68 ~~~~~vvllHG~~~s~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~ 146 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGEN-SWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPE 146 (432)
T ss_dssp TTSEEEEEECCTTCCTTS-HHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCc-hHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999988 5 7877 7788875 49999999999999873322344566778888888776 4 57
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL 192 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (270)
+++|+||||||.+|+.+|.++|++++++++++|..+....... ... +
T Consensus 147 ~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~~~--~~~---------l---------------------- 193 (432)
T 1gpl_A 147 NVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDTPE--EVR---------L---------------------- 193 (432)
T ss_dssp GEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTCCT--TTS---------C----------------------
T ss_pred cEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCCCh--hhc---------c----------------------
Confidence 9999999999999999999999999999999887553211100 000 0
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCH---HHHHHHHHHhcCCceEEEecCCCcc
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDM---QVARNLKEQVGQNATMESIEKAGHL 242 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~ 242 (270)
......++.+||++.|.++|. ...+ .-..+..++++||.
T Consensus 194 ----~~~da~~V~vIHt~~d~lVP~~~~g~~~-------~lg~~dfypngg~~ 235 (432)
T 1gpl_A 194 ----DPSDAKFVDVIHTDISPILPSLGFGMSQ-------KVGHMDFFPNGGKD 235 (432)
T ss_dssp ----CGGGSSEEEEECSCCSCHHHHCCCBCSS-------CCSSEEEEEGGGSS
T ss_pred ----CcCCCceEEEEEcCCccccccccccccc-------cccceEEccCCCCC
Confidence 001115899999999999875 2111 13466778888884
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-20 Score=147.62 Aligned_cols=164 Identities=18% Similarity=0.186 Sum_probs=119.6
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-c---eEEeecCCCCCCC-----CCC------------------------
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-Y---EVYVPDFLFFGSS-----VTD------------------------ 89 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~---~v~~~d~~g~G~s-----~~~------------------------ 89 (270)
.++++|||+||++++.. .|..+++.|.+. | +|+++|+||+|.| +..
T Consensus 20 ~~~ppVVLlHG~g~s~~-~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAG-QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 45789999999999999 999999999987 8 7999999999976 110
Q ss_pred -------CCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc---cccccEEEecccCCCCchhhhHhhh
Q 024228 90 -------RPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 90 -------~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
....+.+++.+++.+++++++.++++++||||||.+++.++.++| ++|+++|+++++....
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d--------- 169 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD--------- 169 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE---------
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc---------
Confidence 001234455667778888888899999999999999999999998 4899999999875410
Q ss_pred hccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCcc----CCHHHHHHHHHHhcCCceEEE
Q 024228 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKI----FDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~----~~~~~~~~~~~~~~~~~~~~~ 235 (270)
. + ...+++.+.|+.|.. .+.. .++.+.+.++
T Consensus 170 ---------------------------~-----p------~g~~~L~ilG~~d~~p~V~~pss-------~L~~ga~~v~ 204 (484)
T 2zyr_A 170 ---------------------------A-----P------EGIPTLAVFGNPKALPALGLPEE-------KVVYNATNVY 204 (484)
T ss_dssp ---------------------------C-----C------TTSCEEEEEECGGGSCCSSCCSS-------CCEETSEEEE
T ss_pred ---------------------------c-----C------cCCHHHHHhCCCCcCCcccChhH-------hcCCCceEEE
Confidence 0 0 003455555544421 1100 1211557778
Q ss_pred ecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 236 IEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 236 ~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+++++|..+.++++.+ +.+.+||...
T Consensus 205 i~~a~H~~ll~dp~v~-~~Vl~fL~~~ 230 (484)
T 2zyr_A 205 FNNMTHVQLCTSPETF-AVMFEFINGY 230 (484)
T ss_dssp ETTCCHHHHHHCHHHH-HHHHHHHHSS
T ss_pred ECCCCccccccCHHHH-HHHHHHhccc
Confidence 8999999998888755 5689999754
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.3e-17 Score=122.77 Aligned_cols=213 Identities=15% Similarity=0.108 Sum_probs=125.9
Q ss_pred CceeEEEeec-CCeEEEEEecCCCCCCceEEEeCCCC--CcccccHHH---HHHHhhcc-ceEEeecCCCCC-CCCCCCC
Q 024228 20 GMTQRTIEIE-PGTILNIWVPKKTTKKHAVVLLHPFG--FDGILTWQF---QVLALAKT-YEVYVPDFLFFG-SSVTDRP 91 (270)
Q Consensus 20 ~~~~~~i~~~-~g~~l~~~~~~~~~~~~~vv~~hG~~--~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~G-~s~~~~~ 91 (270)
.++...+..+ .|..+.++. .+.. .|+||++||++ ++.. .|.. +.+.+.+. +.|+++|.++.+ .++....
T Consensus 10 ~~~~~~~~S~~~~~~~~~~~-~P~~-~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~ 86 (280)
T 1r88_A 10 PYENLMVPSPSMGRDIPVAF-LAGG-PHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQD 86 (280)
T ss_dssp CCEEEEEEETTTTEEEEEEE-ECCS-SSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSC
T ss_pred CEEEEEEECcccCCcceEEE-eCCC-CCEEEEECCCCCCCChh-hhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCC
Confidence 3555566654 577776652 2212 48999999995 4555 6765 45667666 999999997642 2221111
Q ss_pred -CCCh-HHHHHHHHHHHHH-hCCC--ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhh
Q 024228 92 -DRTA-SFQAECMAKGLRK-LGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (270)
Q Consensus 92 -~~~~-~~~~~~~~~~l~~-~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
.... +.+++++..+++. ++.+ +++|+|+||||.+|+.+|.++|+++++++++++................ ....
T Consensus 87 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~-~~~~ 165 (280)
T 1r88_A 87 GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAG-MQQF 165 (280)
T ss_dssp TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHH-HHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHH-hhhc
Confidence 1233 4456788888887 6654 8999999999999999999999999999999988654321110000000 0000
Q ss_pred hhhcccccHHHHHHHHHhhh--hcCCCChhhhhhhh---heeeeEEE----cCCCcc-------CCHHHHHHHHHHhc-C
Q 024228 167 VDFLLPKTADALKVQFDIAC--YKLPTLPAFVYKHI---LEKIHLLW----GENDKI-------FDMQVARNLKEQVG-Q 229 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~P~l~i~----g~~D~~-------~~~~~~~~~~~~~~-~ 229 (270)
.. + . ....+.... ......+.....++ ..|+++.+ |++|.. ++.+..+++.+.+. .
T Consensus 166 ~~-~---~---~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~ 238 (280)
T 1r88_A 166 GG-V---D---TNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSV 238 (280)
T ss_dssp HC-C---C---THHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHT
T ss_pred cc-c---c---hhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHC
Confidence 00 0 0 000000000 00000011111122 37999999 999983 57778888877764 2
Q ss_pred ---CceEEEecCCCcce
Q 024228 230 ---NATMESIEKAGHLV 243 (270)
Q Consensus 230 ---~~~~~~~~~~gH~~ 243 (270)
+.++.++++++|..
T Consensus 239 g~~~~~~~~~~~g~H~~ 255 (280)
T 1r88_A 239 GGHNGHFDFPASGDNGW 255 (280)
T ss_dssp TCCSEEEECCSSCCSSH
T ss_pred CCcceEEEecCCCCcCh
Confidence 35677767789965
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.79 E-value=7.4e-18 Score=141.31 Aligned_cols=126 Identities=14% Similarity=0.049 Sum_probs=90.7
Q ss_pred eEEEeecCCeEEEEEecCC--CCCCceEEEeCCCCCcc-----c-ccHHH-HH---HHhhcc-ceEEeecCCCCCCCCCC
Q 024228 23 QRTIEIEPGTILNIWVPKK--TTKKHAVVLLHPFGFDG-----I-LTWQF-QV---LALAKT-YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~--~~~~~~vv~~hG~~~~~-----~-~~~~~-~~---~~l~~~-~~v~~~d~~g~G~s~~~ 89 (270)
...+...||.+|+.+...+ ..+.|+||++||++... . ..|.. +. +.|+++ |.|+.+|+||+|.|...
T Consensus 27 ~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~ 106 (615)
T 1mpx_A 27 EVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 106 (615)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCc
Confidence 3445566999987654433 23457888899988753 1 13432 22 677777 99999999999999865
Q ss_pred CCCCC------hH---HHHHHHHHHHHHhCC------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 90 RPDRT------AS---FQAECMAKGLRKLGV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 90 ~~~~~------~~---~~~~~~~~~l~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
..... .. ...+|+.++++.+.. .+++++|||+||.+++.+|...|++++++|.+++...
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 107 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 43321 11 446666666665422 3899999999999999999988999999999998876
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.5e-17 Score=122.50 Aligned_cols=213 Identities=14% Similarity=0.049 Sum_probs=126.5
Q ss_pred ceeEEEeec-CCeEEEEEecCCCCCCceEEEeCCCC--CcccccHHHH---HHHhhcc-ceEEeecCCCC-CCCCCCC--
Q 024228 21 MTQRTIEIE-PGTILNIWVPKKTTKKHAVVLLHPFG--FDGILTWQFQ---VLALAKT-YEVYVPDFLFF-GSSVTDR-- 90 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~~~~~~~~~~~vv~~hG~~--~~~~~~~~~~---~~~l~~~-~~v~~~d~~g~-G~s~~~~-- 90 (270)
++...+..+ .|..+.++.+... +++|+++||++ .+.. .|... .+.+.+. +.|+++|.+|. +.++...
T Consensus 6 ~~~~~~~s~~~~~~~~v~~~p~~--~~~v~llHG~~~~~~~~-~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~ 82 (280)
T 1dqz_A 6 VEYLQVPSASMGRDIKVQFQGGG--PHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPS 82 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEECCS--SSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSC
T ss_pred EEEEEEECcccCceeEEEEcCCC--CCEEEEECCCCCCCCcc-cccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCC
Confidence 444555544 5677777766432 46899999995 3666 77654 3556666 99999998754 2222111
Q ss_pred ------CCCChHH-HHHHHHHHHHH-hCC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh
Q 024228 91 ------PDRTASF-QAECMAKGLRK-LGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 91 ------~~~~~~~-~~~~~~~~l~~-~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
.....+. +++++..++++ ++. ++++|+||||||.+|+.++.++|+++++++++++...............
T Consensus 83 ~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~ 162 (280)
T 1dqz_A 83 QSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGL 162 (280)
T ss_dssp TTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhhhHHH
Confidence 1234444 35788888887 665 4899999999999999999999999999999998865433110000000
Q ss_pred c----cchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCc--------------cCCHHHHHH
Q 024228 161 I----GYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDK--------------IFDMQVARN 222 (270)
Q Consensus 161 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~--------------~~~~~~~~~ 222 (270)
. ........+..... ..+.. ....... ..+.....|+++.+|+.|. .++.+..+.
T Consensus 163 ~~~~~~~~~~~~~~g~~~~---~~~~~---~~p~~~~-~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~ 235 (280)
T 1dqz_A 163 AMNDSGGYNANSMWGPSSD---PAWKR---NDPMVQI-PRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQT 235 (280)
T ss_dssp HHHHTTSCCHHHHHCSTTS---HHHHH---TCTTTTH-HHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHH
T ss_pred HhhhccCcCHHHhcCCCCc---hhhhh---cCHHHHH-HHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHH
Confidence 0 00000000000000 00000 0000001 1110113799999999997 456777777
Q ss_pred HHHHhc-C---CceEEEecCCCcce
Q 024228 223 LKEQVG-Q---NATMESIEKAGHLV 243 (270)
Q Consensus 223 ~~~~~~-~---~~~~~~~~~~gH~~ 243 (270)
+.+.+. . ++++.++++++|..
T Consensus 236 ~~~~L~~~g~~~~~~~~~~~g~H~~ 260 (280)
T 1dqz_A 236 FRDTYAADGGRNGVFNFPPNGTHSW 260 (280)
T ss_dssp HHHHHHHTTCCSEEEECCSCCCSSH
T ss_pred HHHHHHhCCCCceEEEecCCCccCh
Confidence 777664 2 35666677789975
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=132.27 Aligned_cols=103 Identities=23% Similarity=0.259 Sum_probs=93.0
Q ss_pred CCCceEEEeCCCCCcc------cccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceE
Q 024228 43 TKKHAVVLLHPFGFDG------ILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCT 115 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~------~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (270)
+++++|||+||++++. . .|..+.+.|.++ |.|+++|+||+|.+..+ ..+.+++++++.++++.++.++++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~-~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~--~~~~~~l~~~i~~~l~~~~~~~v~ 82 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLE-YWYGIQEDLQQRGATVYVANLSGFQSDDGP--NGRGEQLLAYVKTVLAATGATKVN 82 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEE-SSTTHHHHHHHTTCCEEECCCCSSCCSSST--TSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCEEEEECCCCCCccccchHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4578999999999888 6 899999999988 99999999999998643 356788999999999999989999
Q ss_pred EEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 116 LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|+||||||.++..++.++|++|+++|+++++..
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~ 115 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCCC
Confidence 999999999999999999999999999998654
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-19 Score=143.83 Aligned_cols=130 Identities=12% Similarity=0.043 Sum_probs=90.1
Q ss_pred CCceeEEEee--cCCeEEEEE--ecCC-CCCCceEEEeCCCCCcccc-------------cHH----HHHHHhhcc-ceE
Q 024228 19 VGMTQRTIEI--EPGTILNIW--VPKK-TTKKHAVVLLHPFGFDGIL-------------TWQ----FQVLALAKT-YEV 75 (270)
Q Consensus 19 ~~~~~~~i~~--~~g~~l~~~--~~~~-~~~~~~vv~~hG~~~~~~~-------------~~~----~~~~~l~~~-~~v 75 (270)
.+++.+.+.+ .+|..+..+ .+.. .++.|+||++||.+++... .|. .++..|+++ |.|
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~V 162 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVA 162 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEE
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEE
Confidence 4444444444 477777554 3433 3456899999999876540 113 577888888 999
Q ss_pred EeecCCCCCCCCCCCCC-----CChHHH---------------HHHHHHHHHHh------CCCceEEEEEchhHHHHHHH
Q 024228 76 YVPDFLFFGSSVTDRPD-----RTASFQ---------------AECMAKGLRKL------GVEKCTLVGVSYGGMVGFKM 129 (270)
Q Consensus 76 ~~~d~~g~G~s~~~~~~-----~~~~~~---------------~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~ 129 (270)
+++|+||+|.+...... .....+ +.|+.++++.+ +.++++++||||||.+++.+
T Consensus 163 l~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~ 242 (391)
T 3g8y_A 163 VAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVL 242 (391)
T ss_dssp EECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHH
Confidence 99999999998754211 233232 25666667665 23579999999999999988
Q ss_pred HhhCccccccEEEecccCCC
Q 024228 130 AEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 130 a~~~p~~v~~~i~~~~~~~~ 149 (270)
|... ++|+++|+.++....
T Consensus 243 a~~~-~~i~a~v~~~~~~~~ 261 (391)
T 3g8y_A 243 GVLD-KDIYAFVYNDFLCQT 261 (391)
T ss_dssp HHHC-TTCCEEEEESCBCCH
T ss_pred HHcC-CceeEEEEccCCCCc
Confidence 8875 469999988876553
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.6e-19 Score=141.35 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=88.3
Q ss_pred CCCceEEEeCCCCCcc-cccHHH-HHHHhhc--cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----C--CC
Q 024228 43 TKKHAVVLLHPFGFDG-ILTWQF-QVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----G--VE 112 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~-~~~~~~-~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~--~~ 112 (270)
+++|+||++||++++. . .|.. +++.|.+ +|+|+++|+||+|.|.......+.+.+++|+.++++.+ + .+
T Consensus 68 ~~~p~vvliHG~~~~~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~ 146 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGED-SWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPE 146 (452)
T ss_dssp TTSCEEEEECCTTCCSSS-SHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEEcCCCCCCCc-hHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999988 5 8887 7777765 49999999999999874322345566788888888887 5 67
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+++|+||||||.+|+.+|.++|++|+++++++|..+
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 147 NVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 999999999999999999999999999999998754
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.4e-18 Score=134.45 Aligned_cols=122 Identities=12% Similarity=0.076 Sum_probs=85.4
Q ss_pred EEeecCCeEEEEE--ecCC-CCCCceEEEeCCCCCcccccHH------------------HHHHHhhcc-ceEEeecCCC
Q 024228 25 TIEIEPGTILNIW--VPKK-TTKKHAVVLLHPFGFDGILTWQ------------------FQVLALAKT-YEVYVPDFLF 82 (270)
Q Consensus 25 ~i~~~~g~~l~~~--~~~~-~~~~~~vv~~hG~~~~~~~~~~------------------~~~~~l~~~-~~v~~~d~~g 82 (270)
.+...+|..+..+ .+.. .++.|+||++||.+++.. .+. .++..|+++ |.|+++|+||
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~-~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG 174 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKE-GLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPA 174 (398)
T ss_dssp EECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHH-HHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTT
T ss_pred EEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcc-cccccccccccccccccchHHHHHHHHHHCCCEEEEecCCC
Confidence 3444578777654 3443 345689999999988644 221 577888888 9999999999
Q ss_pred CCCCCCCCC-------------------C-CChHHHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccc
Q 024228 83 FGSSVTDRP-------------------D-RTASFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDL 136 (270)
Q Consensus 83 ~G~s~~~~~-------------------~-~~~~~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~ 136 (270)
+|.+..... . ......+.|+.++++.+. .+++.++||||||.+++.+++..+ +
T Consensus 175 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~~-~ 253 (398)
T 3nuz_A 175 AGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDT-S 253 (398)
T ss_dssp SGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHCT-T
T ss_pred CCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcCC-c
Confidence 999874331 0 111123456667777663 347999999999999998888764 6
Q ss_pred cccEEEecccCC
Q 024228 137 VESMVVTCSVMG 148 (270)
Q Consensus 137 v~~~i~~~~~~~ 148 (270)
|+++|.+++...
T Consensus 254 i~a~v~~~~~~~ 265 (398)
T 3nuz_A 254 IYAFVYNDFLCQ 265 (398)
T ss_dssp CCEEEEESCBCC
T ss_pred EEEEEEeccccc
Confidence 999988765443
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-19 Score=141.03 Aligned_cols=105 Identities=14% Similarity=0.105 Sum_probs=88.2
Q ss_pred CCCceEEEeCCCCCcc-cccHHH-HHHHhhc--cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CC--C
Q 024228 43 TKKHAVVLLHPFGFDG-ILTWQF-QVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GV--E 112 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~-~~~~~~-~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~--~ 112 (270)
+++|+||++||++++. . .|.. +++.|.+ +|+|+++|+||+|.|.......+...+++|+.++++.+ +. +
T Consensus 68 ~~~p~vvliHG~~~~~~~-~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGED-GWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp TTSEEEEEECCSCCTTCT-THHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCc-hHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4578999999999988 6 8887 6677765 49999999999999873322345566788888888887 53 7
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+++|+||||||.+|+.+|.++|++|+++++++|..+
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 999999999999999999999999999999998754
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-18 Score=138.95 Aligned_cols=106 Identities=11% Similarity=0.087 Sum_probs=84.8
Q ss_pred CCCceEEEeCCCCCcccccHHH-HHHHh-h-ccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CCCc
Q 024228 43 TKKHAVVLLHPFGFDGILTWQF-QVLAL-A-KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------GVEK 113 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l-~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~------~~~~ 113 (270)
.++|+||++||++++....|.. +++.| . ++|+|+++|+||+|.|.......+.+.+++++.++++.+ +.++
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~ 146 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSN 146 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 4578999999999885327876 66666 3 349999999999998863222244556677787777766 4679
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
++|+||||||.+|..+|.++|++|+++++++|..+
T Consensus 147 v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 147 VHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 99999999999999999999999999999998754
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.73 E-value=9.4e-18 Score=127.74 Aligned_cols=101 Identities=23% Similarity=0.156 Sum_probs=89.3
Q ss_pred CCCceEEEeCCCCCccc----ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEE
Q 024228 43 TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 117 (270)
+++++|||+||++++.. ..|..+.+.|.+. |.|+++|+||+|.+. .+.+++++++.++++.++.++++|+
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-----~~~~~~~~~i~~~~~~~~~~~v~lv 79 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNLI 79 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-----hhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 35789999999988741 2888899999888 999999999999875 4578889999999999988999999
Q ss_pred EEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
||||||.++..++.++|++|+++|+++++..
T Consensus 80 GhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 80 GHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EECHhHHHHHHHHHhChhheeEEEEECCCCC
Confidence 9999999999999999999999999998543
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=134.04 Aligned_cols=128 Identities=13% Similarity=0.046 Sum_probs=90.5
Q ss_pred eeEEEeecCCeEEEEEe--cCCCCCCceEEEeCCCCCcc-----c--ccHHHH---H-HHhhcc-ceEEeecCCCCCCCC
Q 024228 22 TQRTIEIEPGTILNIWV--PKKTTKKHAVVLLHPFGFDG-----I--LTWQFQ---V-LALAKT-YEVYVPDFLFFGSSV 87 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~--~~~~~~~~~vv~~hG~~~~~-----~--~~~~~~---~-~~l~~~-~~v~~~d~~g~G~s~ 87 (270)
+...++..||.+|+.+. +....+.|+||++||++... . ..|... . +.|+++ |.|+.+|+||+|.|.
T Consensus 38 ~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 38 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 44556677999887644 33323457888899877541 1 022222 2 667776 999999999999998
Q ss_pred CCCCCCC-----hH----HHHHHHHHHHHHhCC------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 88 TDRPDRT-----AS----FQAECMAKGLRKLGV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 88 ~~~~~~~-----~~----~~~~~~~~~l~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
....... .. ...+|+.++++.+.. .++.++|+|+||.+++.+|.+.|++++++|.+++....
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 6543321 11 456666666665421 38999999999999999999899999999999988764
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.72 E-value=4.9e-18 Score=131.33 Aligned_cols=105 Identities=13% Similarity=0.158 Sum_probs=87.8
Q ss_pred CCCceEEEeCCCCCc----------ccccH----HHHHHHhhcc-ce---EEeecCCCCCCCCCCC----CCCChHHHHH
Q 024228 43 TKKHAVVLLHPFGFD----------GILTW----QFQVLALAKT-YE---VYVPDFLFFGSSVTDR----PDRTASFQAE 100 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~----------~~~~~----~~~~~~l~~~-~~---v~~~d~~g~G~s~~~~----~~~~~~~~~~ 100 (270)
..+++|||+||++++ .. .| ..+++.|.++ |. |+++|+||+|.|..+. .....+++.+
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~-~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~ 116 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVS-GYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKT 116 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCT-TTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHH
T ss_pred CCCCeEEEECCcCCCcccccccccccc-cccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHH
Confidence 456789999999994 45 88 8899999886 87 9999999999876442 2244566677
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccCC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMG 148 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~ 148 (270)
++.++++.++.++++|+||||||.+++.++.++ |++|+++|+++++..
T Consensus 117 ~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 117 FIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 777888888889999999999999999999998 899999999998754
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-17 Score=136.15 Aligned_cols=124 Identities=13% Similarity=0.070 Sum_probs=93.9
Q ss_pred eeEEEeecCCeEEEEE--ecCCCCCCceEEEeCCCCCcccccHHH---HH-HHhhcc-ceEEeecCCCCCCCCCCCCCCC
Q 024228 22 TQRTIEIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGILTWQF---QV-LALAKT-YEVYVPDFLFFGSSVTDRPDRT 94 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~---~~-~~l~~~-~~v~~~d~~g~G~s~~~~~~~~ 94 (270)
+...|+..||.+|++. .+....+.|+||+.||++.... .+.. .+ ..|+++ |.|+++|+||+|.|.......
T Consensus 10 ~~v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~-~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~~- 87 (587)
T 3i2k_A 10 SNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDV-FAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPH- 87 (587)
T ss_dssp EEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCH-HHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCTT-
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCcc-ccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccccc-
Confidence 3456777799998764 3433345688999999887754 3332 23 677777 999999999999998765432
Q ss_pred hHHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEeccc-CC
Q 024228 95 ASFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV-MG 148 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~-~~ 148 (270)
....+|+.++++.+. ..+++++|+|+||.+++.+|...|++++++|.+++. ..
T Consensus 88 -~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d 146 (587)
T 3i2k_A 88 -VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 146 (587)
T ss_dssp -TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred -cchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccc
Confidence 345677777777653 258999999999999999999999999999999887 44
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.71 E-value=8.2e-18 Score=134.69 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=84.2
Q ss_pred CCCceEEEeCCCCCcccccHHH-HHHHhh-c-cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CCCc
Q 024228 43 TKKHAVVLLHPFGFDGILTWQF-QVLALA-K-TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------GVEK 113 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~-~~~~l~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~------~~~~ 113 (270)
.++|+||++||++++....|.. +.+.|. . +|+|+++|+||+|.+.......+.+.+++++.++++.+ +.++
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~ 147 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 4578999999999876436766 556554 3 39999999999998753222345666788888888876 4679
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
++|+||||||.+|..+|.++|+ |.++++++|..+
T Consensus 148 v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 148 VQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp EEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred EEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 9999999999999999999999 999999998764
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-15 Score=123.92 Aligned_cols=126 Identities=18% Similarity=0.089 Sum_probs=93.7
Q ss_pred eeEEEeecCCeEEEEE--ecCCCCCCceEEEeCCCCCcccccHH----------------------HHHHHhhcc-ceEE
Q 024228 22 TQRTIEIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGILTWQ----------------------FQVLALAKT-YEVY 76 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~----------------------~~~~~l~~~-~~v~ 76 (270)
+...|+..||.+|+.. .+...++.|+||+.||++......+. .....|+++ |.|+
T Consensus 42 ~~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv 121 (560)
T 3iii_A 42 KDGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVV 121 (560)
T ss_dssp EEEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEE
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEE
Confidence 4455666799998764 44433456899999999886421111 125678877 9999
Q ss_pred eecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-----CceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 77 VPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 77 ~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
++|+||+|.|........ ....+|+.++++.+.. .+++++|+|+||.+++.+|+..|++++++|..++...
T Consensus 122 ~~D~RG~G~S~G~~~~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 122 KVALRGSDKSKGVLSPWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp EEECTTSTTCCSCBCTTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred EEcCCCCCCCCCccccCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 999999999987644322 3556777777776532 4799999999999999999999999999999988765
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-15 Score=118.56 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=80.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEch
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSY 121 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~ 121 (270)
..+++++|+||++++.. .|..+.+.|. +.|+.+|+|+ . ....+++.+++++.+.++.+. .++++++||||
T Consensus 44 ~~~~~l~~~hg~~g~~~-~~~~~~~~l~--~~v~~~~~~~--~----~~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~ 114 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTT-VFHSLASRLS--IPTYGLQCTR--A----APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSY 114 (316)
T ss_dssp CSSCCEEEECCTTCCSG-GGHHHHHHCS--SCEEEECCCT--T----SCTTCHHHHHHHHHHHHTTTCSSCCCEEEEETH
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC--CCEEEEECCC--C----CCcCCHHHHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 35789999999999999 9999998886 9999999993 1 234689999999999998886 36899999999
Q ss_pred hHHHHHHHHhhCc---cc---cccEEEecccC
Q 024228 122 GGMVGFKMAEMYP---DL---VESMVVTCSVM 147 (270)
Q Consensus 122 Gg~~a~~~a~~~p---~~---v~~~i~~~~~~ 147 (270)
||.+|..+|.+.+ ++ +++++++++..
T Consensus 115 Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 115 GACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 9999999998764 45 89999988754
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-14 Score=109.12 Aligned_cols=201 Identities=13% Similarity=0.035 Sum_probs=120.1
Q ss_pred ceeEEEeecCCeEEE--EEecCC---CCCCceEEEeCCCCCcccccH-------HHHHHHhhc-----cceEEeecCCCC
Q 024228 21 MTQRTIEIEPGTILN--IWVPKK---TTKKHAVVLLHPFGFDGILTW-------QFQVLALAK-----TYEVYVPDFLFF 83 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~--~~~~~~---~~~~~~vv~~hG~~~~~~~~~-------~~~~~~l~~-----~~~v~~~d~~g~ 83 (270)
++...+...+| .+. ++.+.. ..+.|+|+++||++++.. .| ..++..|.+ .+.|+++|.+|-
T Consensus 41 ~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~ 118 (297)
T 1gkl_A 41 IVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENEN-TIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG 118 (297)
T ss_dssp EEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTT-STTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST
T ss_pred EEEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcc-hhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC
Confidence 44455555454 444 444443 134578889999987655 44 344555543 288999998752
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHh-C--------------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 84 GSSVTDRPDRTASFQAECMAKGLRKL-G--------------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 84 G~s~~~~~~~~~~~~~~~~~~~l~~~-~--------------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+.. .....+.+++++..+++.. . ..+++|+|+||||.+|+.++.++|+++++++.+++...
T Consensus 119 --~~~--~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 119 --NCT--AQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 194 (297)
T ss_dssp --TCC--TTTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred --ccc--hHHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccccc
Confidence 211 1112344567777777764 2 24689999999999999999999999999999998754
Q ss_pred CCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 149 LTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
..... . .....+...+.... +....+++++.+|++|..+ ...+++.+.+.
T Consensus 195 ~~~~~---------~---------~~~~~~~~~~~~~~----------~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L~ 244 (297)
T 1gkl_A 195 YGNSP---------Q---------DKANSIAEAINRSG----------LSKREYFVFAATGSEDIAY--ANMNPQIEAMK 244 (297)
T ss_dssp BSSSH---------H---------HHHHHHHHHHHHHT----------CCTTSCEEEEEEETTCTTH--HHHHHHHHHHH
T ss_pred cCCcc---------c---------hhhhHHHHHHhhcc----------CCcCcEEEEEEeCCCcccc--hhHHHHHHHHH
Confidence 32110 0 00001111111100 1111156777789999864 35555665554
Q ss_pred --C-----------CceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 229 --Q-----------NATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 229 --~-----------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+ +.++.+++|++|... .....+.++|..+
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~~~g~gH~~~-----~w~~~l~~~l~~l 286 (297)
T 1gkl_A 245 ALPHFDYTSDFSKGNFYFLVAPGATHWWG-----YVRHYIYDALPYF 286 (297)
T ss_dssp TSTTCCBBSCTTTCCEEEEEETTCCSSHH-----HHHHHHHHHGGGS
T ss_pred HcCCccccccccCCceEEEECCCCCcCHH-----HHHHHHHHHHHHH
Confidence 2 568899999999642 2334455555444
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.5e-16 Score=123.80 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=86.5
Q ss_pred EEEEEecCC--CCCCceEEEeCCCCCcccccHH--HHHHHhhcc--ceEEeecCCCCCCCCCCC----------CCCChH
Q 024228 33 ILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQ--FQVLALAKT--YEVYVPDFLFFGSSVTDR----------PDRTAS 96 (270)
Q Consensus 33 ~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~--~~v~~~d~~g~G~s~~~~----------~~~~~~ 96 (270)
+.+|+.... .+++.|||++||+.++....+. .+...+++. +.|+++|+||||+|.+.. ...+.+
T Consensus 24 ~qRy~~~~~~~~~~g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~ 103 (446)
T 3n2z_B 24 NQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSE 103 (446)
T ss_dssp EEEEEEECTTCCTTTCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHH
T ss_pred EEEEEEehhhcCCCCCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHH
Confidence 445655443 1235568888998887651221 234555554 699999999999996421 124678
Q ss_pred HHHHHHHHHHHHhCC-------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 97 FQAECMAKGLRKLGV-------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~-------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+.++|+..++++++. .+++++||||||.+|+.++.++|++|.++|+.+++..
T Consensus 104 q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 104 QALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 899999999988753 3899999999999999999999999999999876643
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-13 Score=109.89 Aligned_cols=225 Identities=13% Similarity=-0.017 Sum_probs=121.5
Q ss_pred EEecCCCCC-CceEEEeCCCCCccc---c----------------cHH-HHH-HH-hhccceEEeecCCCCCCCCCCCCC
Q 024228 36 IWVPKKTTK-KHAVVLLHPFGFDGI---L----------------TWQ-FQV-LA-LAKTYEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 36 ~~~~~~~~~-~~~vv~~hG~~~~~~---~----------------~~~-~~~-~~-l~~~~~v~~~d~~g~G~s~~~~~~ 92 (270)
+..+....+ .|.|.+-||..+... . .++ .++ .. +.+.|.|+++|++|+|.+... ..
T Consensus 96 v~~P~~~~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~-~~ 174 (462)
T 3guu_A 96 VWIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIA-GY 174 (462)
T ss_dssp EEECSSCCSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTC-HH
T ss_pred EEecCCCCCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccC-Cc
Confidence 345544333 688899999876432 0 112 223 34 555599999999999963211 11
Q ss_pred CChHHHHHHHHHHHHHhC---CCceEEEEEchhHHHHHHHHhhCc----c-ccccEEEecccCCCCchhhh-------Hh
Q 024228 93 RTASFQAECMAKGLRKLG---VEKCTLVGVSYGGMVGFKMAEMYP----D-LVESMVVTCSVMGLTESVSN-------AA 157 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p----~-~v~~~i~~~~~~~~~~~~~~-------~~ 157 (270)
.......+.+.+..+..+ ..++.++|||+||..++.+|...| + .+.+.+..+++......... ..
T Consensus 175 ~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~ 254 (462)
T 3guu_A 175 EEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGF 254 (462)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHH
T ss_pred chhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCHHHHHHHhccchhHHH
Confidence 111222344444333323 268999999999999988877654 3 58888888877654321100 00
Q ss_pred -------hhhcc--chh-hhhhcccccHHHHHHHHHh----------------h-hhc-CC----CChhhhh--------
Q 024228 158 -------LERIG--YES-WVDFLLPKTADALKVQFDI----------------A-CYK-LP----TLPAFVY-------- 197 (270)
Q Consensus 158 -------~~~~~--~~~-~~~~~~~~~~~~~~~~~~~----------------~-~~~-~~----~~~~~~~-------- 197 (270)
..... ... ....+.+.....+...... . ... .. ......+
T Consensus 255 ~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~ 334 (462)
T 3guu_A 255 ALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVFSLVNDTNLLNEAPIASILKQETVVQA 334 (462)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTT
T ss_pred HHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHHHHcCCCccccCHHHHHHHHhhccccc
Confidence 00000 000 0000110000000000000 0 000 00 0000111
Q ss_pred ------hhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 198 ------KHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 198 ------~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
....+|++++||++|.++|.+.++++.+.+. .+++++++++.+|....+. -...+.+||++...
T Consensus 335 ~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~---~~~d~l~WL~~r~~ 407 (462)
T 3guu_A 335 EASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIF---GLVPSLWFIKQAFD 407 (462)
T ss_dssp TCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHH---THHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhh---hHHHHHHHHHHHhC
Confidence 1223899999999999999999999988774 3578999999999886422 14556666665543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.7e-17 Score=129.28 Aligned_cols=105 Identities=17% Similarity=0.156 Sum_probs=77.4
Q ss_pred CCCceEEEeCCCCCc--------ccccHH----HHHHHhhcc-ceEEeecCCCCCCCCCCCC------------------
Q 024228 43 TKKHAVVLLHPFGFD--------GILTWQ----FQVLALAKT-YEVYVPDFLFFGSSVTDRP------------------ 91 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~--------~~~~~~----~~~~~l~~~-~~v~~~d~~g~G~s~~~~~------------------ 91 (270)
.++++|||+||++++ .. .|. .+++.|.+. |+|+++|+||+|.|.....
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~-~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~ 128 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGEN-YWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHS 128 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCC-TTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchh-hhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccc
Confidence 457899999999874 23 674 588899776 9999999999998752100
Q ss_pred -CCChHHHHHHHHHHHHHhC-CCceEEEEEchhHHHHHHHHhh--------------------------CccccccEEEe
Q 024228 92 -DRTASFQAECMAKGLRKLG-VEKCTLVGVSYGGMVGFKMAEM--------------------------YPDLVESMVVT 143 (270)
Q Consensus 92 -~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~--------------------------~p~~v~~~i~~ 143 (270)
.++.+.+++|+.+++++++ .++++|+||||||.++..+|.. +|++|.++|++
T Consensus 129 ~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i 208 (431)
T 2hih_A 129 EKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTI 208 (431)
T ss_dssp HHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEE
Confidence 0112222334444555555 3799999999999999998876 68899999999
Q ss_pred cccCC
Q 024228 144 CSVMG 148 (270)
Q Consensus 144 ~~~~~ 148 (270)
+++..
T Consensus 209 ~tP~~ 213 (431)
T 2hih_A 209 ATPHN 213 (431)
T ss_dssp SCCTT
T ss_pred CCCCC
Confidence 98654
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.57 E-value=4e-14 Score=107.38 Aligned_cols=200 Identities=13% Similarity=0.078 Sum_probs=118.7
Q ss_pred hcccCCceeEEEeec-CCeEEEE--EecCCC---CCCceEEEeCCCCCccc-ccHHHHHHHhhc--c---ceEEeecCCC
Q 024228 15 LLKLVGMTQRTIEIE-PGTILNI--WVPKKT---TKKHAVVLLHPFGFDGI-LTWQFQVLALAK--T---YEVYVPDFLF 82 (270)
Q Consensus 15 ~~~~~~~~~~~i~~~-~g~~l~~--~~~~~~---~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~--~---~~v~~~d~~g 82 (270)
.......+...+... .|..+.+ +.+..- .+-|+|+++||.+.... ..+..+...+.+ . +.|+++|+|+
T Consensus 12 ~~~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~ 91 (275)
T 2qm0_A 12 QIITSNTEQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPI 91 (275)
T ss_dssp CCCCTTEEEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSC
T ss_pred ceecCCceEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCC
Confidence 334455666666665 5666555 444321 23588999999764211 133333333321 2 8899999986
Q ss_pred CC----------CCCCC--------------CCCC---Ch-HHHHHHHHHHHHH-hC--CCceEEEEEchhHHHHHHHHh
Q 024228 83 FG----------SSVTD--------------RPDR---TA-SFQAECMAKGLRK-LG--VEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 83 ~G----------~s~~~--------------~~~~---~~-~~~~~~~~~~l~~-~~--~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
.+ .+... .... .. +.+.+++..+++. ++ .++++++|||+||.+++.++.
T Consensus 92 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~ 171 (275)
T 2qm0_A 92 EGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILF 171 (275)
T ss_dssp SSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHH
Confidence 31 11100 0011 11 1223455555554 23 358999999999999999999
Q ss_pred hCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCC
Q 024228 132 MYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGEN 211 (270)
Q Consensus 132 ~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 211 (270)
++|+.++++++++|........ . . .... .+..... ......|+++++|+.
T Consensus 172 ~~p~~f~~~~~~s~~~~~~~~~---~-------------~-~~~~---~~~~~~~----------~~~~~~~~~l~~G~~ 221 (275)
T 2qm0_A 172 TNLNAFQNYFISSPSIWWNNKS---V-------------L-EKEE---NLIIELN----------NAKFETGVFLTVGSL 221 (275)
T ss_dssp HCGGGCSEEEEESCCTTHHHHG---G-------------G-GGTT---HHHHHHH----------TCSSCEEEEEEEETT
T ss_pred hCchhhceeEEeCceeeeChHH---H-------------H-HHHH---HHHhhhc----------ccCCCceEEEEeCCc
Confidence 9999999999998875321100 0 0 0000 0000000 011227999999999
Q ss_pred CccCCHHHHHHHHHHh---c-C--CceEEEecCCCccee
Q 024228 212 DKIFDMQVARNLKEQV---G-Q--NATMESIEKAGHLVN 244 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~---~-~--~~~~~~~~~~gH~~~ 244 (270)
|..++...++++.+.+ . . +.++.++++++|+..
T Consensus 222 D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 222 EREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp SCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH
T ss_pred ccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCcccc
Confidence 9888888888888888 3 1 357889999999754
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.4e-14 Score=112.56 Aligned_cols=193 Identities=11% Similarity=0.074 Sum_probs=112.8
Q ss_pred ceeEEEeec-CCe--EEEEEecCC--CCCCceEEEeCCCCCcccccHHHHHHHhhcc-c----eEEeecCCCCC-CCCCC
Q 024228 21 MTQRTIEIE-PGT--ILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-Y----EVYVPDFLFFG-SSVTD 89 (270)
Q Consensus 21 ~~~~~i~~~-~g~--~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~----~v~~~d~~g~G-~s~~~ 89 (270)
++...+... .|. .+.++.+.. ..+.|+|+++||.+......+..++..|.+. + .|+++|++|++ ++...
T Consensus 168 v~~~~~~S~~~g~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~ 247 (403)
T 3c8d_A 168 AKEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHEL 247 (403)
T ss_dssp CEEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHS
T ss_pred eEEEEEEccccCCcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccC
Confidence 444455443 343 444455543 2456899999995431111233455666554 4 49999998632 12111
Q ss_pred CCCC-ChHHHHHHHHHHHHHh-C----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 90 RPDR-TASFQAECMAKGLRKL-G----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 90 ~~~~-~~~~~~~~~~~~l~~~-~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
.... ..+.+++++..+++.. . .++++|+|+||||.+++.++.++|+++++++++++.........
T Consensus 248 ~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~~--------- 318 (403)
T 3c8d_A 248 PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGG--------- 318 (403)
T ss_dssp SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTS---------
T ss_pred CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCCC---------
Confidence 1111 1223345666666653 2 35899999999999999999999999999999988764322100
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCC
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAG 240 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~g 240 (270)
. .. ..+...+... . ......|+++.+|+.|..+ .+..+.+.+.+. .++++.+++| +
T Consensus 319 ~-------~~--~~~~~~~~~~--~--------~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-g 377 (403)
T 3c8d_A 319 Q-------QE--GVLLEKLKAG--E--------VSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-G 377 (403)
T ss_dssp S-------SC--CHHHHHHHTT--S--------SCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-C
T ss_pred C-------cH--HHHHHHHHhc--c--------ccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-C
Confidence 0 00 0111111100 0 0112278999999988654 567777877775 2578999998 6
Q ss_pred cce
Q 024228 241 HLV 243 (270)
Q Consensus 241 H~~ 243 (270)
|..
T Consensus 378 H~~ 380 (403)
T 3c8d_A 378 HDA 380 (403)
T ss_dssp SCH
T ss_pred CCH
Confidence 874
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.8e-14 Score=111.14 Aligned_cols=101 Identities=19% Similarity=0.157 Sum_probs=72.2
Q ss_pred CCCceEEEeCCCCCccc------ccHHH----HHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHH-------
Q 024228 43 TKKHAVVLLHPFGFDGI------LTWQF----QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAK------- 104 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~------~~~~~----~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~------- 104 (270)
.++++|||+||++++.. ..|.. +++.|.+. |+|+++|+||+|.+... ...+.+.+..
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~~-----a~~l~~~i~~~~vDy~~ 78 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDR-----ACEAYAQLVGGTVDYGA 78 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHHH-----HHHHHHHHHCEEEECCH
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcccc-----HHHHHHHHHhhhhhhhh
Confidence 35788999999988642 14763 44889876 99999999999976421 1122222210
Q ss_pred -----------------HHHH-hCCCceEEEEEchhHHHHHHHHhh-------------------Cc------cccccEE
Q 024228 105 -----------------GLRK-LGVEKCTLVGVSYGGMVGFKMAEM-------------------YP------DLVESMV 141 (270)
Q Consensus 105 -----------------~l~~-~~~~~~~l~G~S~Gg~~a~~~a~~-------------------~p------~~v~~~i 141 (270)
++++ .+.++++|+||||||.++..++.. +| ++|.++|
T Consensus 79 ~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV 158 (387)
T 2dsn_A 79 AHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVT 158 (387)
T ss_dssp HHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEE
T ss_pred hhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEE
Confidence 1122 467899999999999999999972 35 6899999
Q ss_pred EecccCC
Q 024228 142 VTCSVMG 148 (270)
Q Consensus 142 ~~~~~~~ 148 (270)
+++++..
T Consensus 159 ~i~tP~~ 165 (387)
T 2dsn_A 159 TIATPHD 165 (387)
T ss_dssp EESCCTT
T ss_pred EECCCCC
Confidence 9998654
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.1e-11 Score=92.40 Aligned_cols=210 Identities=11% Similarity=0.028 Sum_probs=111.0
Q ss_pred ccCCceeEEEeecC-CeEE--EEEecCCC---CCCceEEEeCCCCCcccccHHHHHHHhhc-c-ceEEeecCCCCC----
Q 024228 17 KLVGMTQRTIEIEP-GTIL--NIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLALAK-T-YEVYVPDFLFFG---- 84 (270)
Q Consensus 17 ~~~~~~~~~i~~~~-g~~l--~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~-~~v~~~d~~g~G---- 84 (270)
....++...+..+. |..+ .++.+..- .+-|+|+++||...... ....+...+.+ . .-|+.+++++-.
T Consensus 9 ~~~~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~-~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~ 87 (278)
T 2gzs_A 9 VFYHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR-LDDELLKQLSEKTPPVIVAVGYQTNLPFDL 87 (278)
T ss_dssp SSEEEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH-CCHHHHHHHTTSCCCEEEEEEESSSSSCCH
T ss_pred CCCceEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH-HHHHHHHHhccCCCeEEEEEcCCCCCcCcc
Confidence 34455666666653 4444 44555431 22355656666443222 22234455655 3 667778876421
Q ss_pred ------CCCCC-------------CCCCChHHHHH----HHHHHHHH-hC--CCceEEEEEchhHHHHHHHHhhCccccc
Q 024228 85 ------SSVTD-------------RPDRTASFQAE----CMAKGLRK-LG--VEKCTLVGVSYGGMVGFKMAEMYPDLVE 138 (270)
Q Consensus 85 ------~s~~~-------------~~~~~~~~~~~----~~~~~l~~-~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~ 138 (270)
.+... ........+.+ ++...++. +. .++++++||||||.+++.++.+ |+.++
T Consensus 88 ~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~ 166 (278)
T 2gzs_A 88 NSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFR 166 (278)
T ss_dssp HHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCS
T ss_pred cccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccC
Confidence 11110 00011222222 23333332 12 2468999999999999999999 99999
Q ss_pred cEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccC---
Q 024228 139 SMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIF--- 215 (270)
Q Consensus 139 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~--- 215 (270)
++++++|.......... .... ..... .....|+++.+|+.|...
T Consensus 167 ~~~~~s~~~~~~~~~~~------------------------~~~~--~~~~~-------~~~~~~i~l~~G~~d~~~~~~ 213 (278)
T 2gzs_A 167 SYYSASPSLGRGYDALL------------------------SRVT--AVEPL-------QFCTKHLAIMEGSATQGDNRE 213 (278)
T ss_dssp EEEEESGGGSTTHHHHH------------------------HHHH--TSCTT-------TTTTCEEEEEECCC-------
T ss_pred eEEEeCcchhcCcchHH------------------------HHHH--Hhhcc-------CCCCCcEEEEecCcccccccc
Confidence 99999876432210000 0000 00000 001268999999999764
Q ss_pred -----CHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 216 -----DMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 216 -----~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
+....+++.+.+. -+.++.+++|.+|.... ...+.+.+. ||.+...
T Consensus 214 ~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~--~~~~~~~l~-fl~~~~~ 267 (278)
T 2gzs_A 214 THAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF--NASFRQALL-DISGENA 267 (278)
T ss_dssp ----CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH--HHHHHHHHH-HHTTC--
T ss_pred chhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccchh--HHHHHHHHH-HHhhCCC
Confidence 3566667766654 35788999998897532 233445444 7765544
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-10 Score=91.26 Aligned_cols=126 Identities=14% Similarity=0.022 Sum_probs=86.1
Q ss_pred eeEEEeecCCeEEEEEecCCC---CCCceEEEeCCCCCcccccHHHHHH------------------HhhccceEEeecC
Q 024228 22 TQRTIEIEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVL------------------ALAKTYEVYVPDF 80 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~------------------~l~~~~~v~~~d~ 80 (270)
...++++.++..+.||..... ..+|.+|++||++|++. .+..+.+ .+.+..+++.+|.
T Consensus 22 ~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss-~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDq 100 (452)
T 1ivy_A 22 YSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEec
Confidence 456788877888988765432 35799999999999887 6533321 0124488999996
Q ss_pred -CCCCCCCCCCCC--CChHHHHHHHH----HHHHH---hCCCceEEEEEchhHHHHHHHHhh----CccccccEEEeccc
Q 024228 81 -LFFGSSVTDRPD--RTASFQAECMA----KGLRK---LGVEKCTLVGVSYGGMVGFKMAEM----YPDLVESMVVTCSV 146 (270)
Q Consensus 81 -~g~G~s~~~~~~--~~~~~~~~~~~----~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~i~~~~~ 146 (270)
.|.|.|...... .+.+..++|+. .+++. +...+++|.|+|+||..+..+|.. .+-.++++++.++.
T Consensus 101 P~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~ 180 (452)
T 1ivy_A 101 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCc
Confidence 699999744322 23344455543 34443 345789999999999966665553 34578999999987
Q ss_pred CC
Q 024228 147 MG 148 (270)
Q Consensus 147 ~~ 148 (270)
..
T Consensus 181 ~d 182 (452)
T 1ivy_A 181 SS 182 (452)
T ss_dssp SB
T ss_pred cC
Confidence 65
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4.7e-11 Score=91.50 Aligned_cols=126 Identities=16% Similarity=0.100 Sum_probs=76.6
Q ss_pred CCceEEEEEchhHHHHHHHHhhCccccc-cEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPDLVE-SMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (270)
.++|+|.|+|+||++++.++..+|+.++ +++++++.......... ....... . .........+...... .
T Consensus 10 ~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~-~~~~~~~--~--~~~~~~~~~~~~~~~~----~ 80 (318)
T 2d81_A 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY-YTSCMYN--G--YPSITTPTANMKSWSG----N 80 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC-GGGGSTT--C--CCCCHHHHHHHHHHBT----T
T ss_pred cceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH-HHHHhhc--c--CCCCCCHHHHHHHhhc----c
Confidence 4589999999999999999999999998 88777654321110000 0000000 0 0000011111111110 0
Q ss_pred CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-----CceEEEecCCCcceeecc
Q 024228 190 PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-----NATMESIEKAGHLVNLER 247 (270)
Q Consensus 190 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~ 247 (270)
...+...+. ..|++++||++|.+||++.++++.+.+.. ++++++++++||....+.
T Consensus 81 ~i~~~~~l~--~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~ 141 (318)
T 2d81_A 81 QIASVANLG--QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDF 141 (318)
T ss_dssp TBCCGGGGG--GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESS
T ss_pred cCChhHcCC--CCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCC
Confidence 000111111 26999999999999999999999988751 368899999999986644
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-10 Score=86.24 Aligned_cols=130 Identities=9% Similarity=0.116 Sum_probs=82.3
Q ss_pred HHHHHHHHHHh-CC-CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHH
Q 024228 99 AECMAKGLRKL-GV-EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTAD 176 (270)
Q Consensus 99 ~~~~~~~l~~~-~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
.+++...++.. .. ...+++||||||..++.++.++|+.+++++.++|......... ..
T Consensus 122 ~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~~~~--------------------~~ 181 (331)
T 3gff_A 122 EKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDSPHY--------------------LT 181 (331)
T ss_dssp HHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTTTHH--------------------HH
T ss_pred HHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCChHHH--------------------HH
Confidence 34455555542 21 2347899999999999999999999999999998754321110 00
Q ss_pred HHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCc-------cCCHHHHHHHHHHhc----C--CceEEEecCCCcce
Q 024228 177 ALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDK-------IFDMQVARNLKEQVG----Q--NATMESIEKAGHLV 243 (270)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-------~~~~~~~~~~~~~~~----~--~~~~~~~~~~gH~~ 243 (270)
......... .. ...|+++.+|+.|. .++.+.++++.+.+. . +.++.++++.+|..
T Consensus 182 ~~~~~~~~~----~~--------~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~s 249 (331)
T 3gff_A 182 LLEERVVKG----DF--------KQKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQS 249 (331)
T ss_dssp HHHHHHHHC----CC--------SSEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTT
T ss_pred HHHHHhhcc----cC--------CCCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCccc
Confidence 111111100 00 11799999999998 355556666666554 1 46788999999987
Q ss_pred eecchHhHHHHHHHHHHhh
Q 024228 244 NLERPFVYNRQLKTILASL 262 (270)
Q Consensus 244 ~~~~~~~~~~~i~~fl~~~ 262 (270)
.. +..+.+.+..++...
T Consensus 250 v~--~~~~~~~l~~lf~~~ 266 (331)
T 3gff_A 250 VS--HIGLYDGIRHLFKDF 266 (331)
T ss_dssp HH--HHHHHHHHHHHHGGG
T ss_pred cH--HHHHHHHHHHHHhhc
Confidence 54 455666666665544
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.7e-09 Score=81.28 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=65.6
Q ss_pred CCceEEEeCCCCCcccccHHHH--HHHhh-cc-ceEEeecCCCCC-------CCC---------CCC-------CCCC-h
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQ--VLALA-KT-YEVYVPDFLFFG-------SSV---------TDR-------PDRT-A 95 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~--~~~l~-~~-~~v~~~d~~g~G-------~s~---------~~~-------~~~~-~ 95 (270)
+-|+|.++||.+++.. .|... +..++ +. ..++++|..-.+ .+. ... ..+. .
T Consensus 48 ~~PVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~ 126 (299)
T 4fol_A 48 RIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMY 126 (299)
T ss_dssp CBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHH
T ss_pred CcCEEEEECCCCCChH-HHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHH
Confidence 3588999999999888 77653 23333 33 677777642111 000 000 0011 2
Q ss_pred HHHHHHHHHHHHH-hC---------CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccCC
Q 024228 96 SFQAECMAKGLRK-LG---------VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMG 148 (270)
Q Consensus 96 ~~~~~~~~~~l~~-~~---------~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~ 148 (270)
+.+.+++..+++. +. .++..|.||||||.-|+.+|.++ |++..++...++...
T Consensus 127 ~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 127 DYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 3456777777764 22 24689999999999999999986 456667666666554
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.18 E-value=7.6e-09 Score=83.79 Aligned_cols=117 Identities=14% Similarity=0.012 Sum_probs=80.6
Q ss_pred CeEEEEEecCC-----CCCCceEEEeCCCCCcccccHHHHHH-----------------HhhccceEEeecC-CCCCCCC
Q 024228 31 GTILNIWVPKK-----TTKKHAVVLLHPFGFDGILTWQFQVL-----------------ALAKTYEVYVPDF-LFFGSSV 87 (270)
Q Consensus 31 g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~~~~~~~~~-----------------~l~~~~~v~~~d~-~g~G~s~ 87 (270)
+..+.||.... +...|.+|+++|++|++. .+..+.+ .+.+..+++.+|. .|.|.|.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy 126 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSV 126 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHh-hhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccC
Confidence 56787764332 245799999999999887 6543321 1223378999997 6999986
Q ss_pred CCCC----------CCChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhC------------ccccc
Q 024228 88 TDRP----------DRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY------------PDLVE 138 (270)
Q Consensus 88 ~~~~----------~~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~------------p~~v~ 138 (270)
.... ..+.+..++++..+++.. ...+++|.|+|+||..+..+|... +-.++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLk 206 (483)
T 1ac5_A 127 EQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLK 206 (483)
T ss_dssp SCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEE
T ss_pred CcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCccccee
Confidence 5432 135667788877776653 346899999999999888776531 12478
Q ss_pred cEEEecccCC
Q 024228 139 SMVVTCSVMG 148 (270)
Q Consensus 139 ~~i~~~~~~~ 148 (270)
++++-++...
T Consensus 207 Gi~IGNg~~d 216 (483)
T 1ac5_A 207 ALLIGNGWID 216 (483)
T ss_dssp EEEEEEECCC
T ss_pred eeEecCCccc
Confidence 8888777654
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.2e-08 Score=79.43 Aligned_cols=127 Identities=12% Similarity=0.032 Sum_probs=86.0
Q ss_pred ceeEEEeec-CCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHH---H--------------HhhccceEEeec
Q 024228 21 MTQRTIEIE-PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQV---L--------------ALAKTYEVYVPD 79 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~---~--------------~l~~~~~v~~~d 79 (270)
...-++++. .+..+.||.... +...|.+|+++|++|++. .+..+. + .+.+..+++.+|
T Consensus 16 ~ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiD 94 (421)
T 1cpy_A 16 QYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLD 94 (421)
T ss_dssp CCEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCC
T ss_pred eeEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHh-HHHHHHccCCcEECCCCceeECCcccccccCEEEec
Confidence 345677775 478888765433 245799999999999887 553321 1 122337899999
Q ss_pred C-CCCCCCCCCCC-CCChHHHHHHHHHHHHHh-------CC--CceEEEEEchhHHHHHHHHhhCc------cccccEEE
Q 024228 80 F-LFFGSSVTDRP-DRTASFQAECMAKGLRKL-------GV--EKCTLVGVSYGGMVGFKMAEMYP------DLVESMVV 142 (270)
Q Consensus 80 ~-~g~G~s~~~~~-~~~~~~~~~~~~~~l~~~-------~~--~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~i~ 142 (270)
. .|.|.|..... ..+.+..++|+.++++.+ .. .+++|.|.|+||..+..+|...- -.++++++
T Consensus 95 qPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~I 174 (421)
T 1cpy_A 95 QPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLI 174 (421)
T ss_dssp CSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEE
T ss_pred CCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEe
Confidence 5 59999865443 345556677777766543 33 68999999999998877775421 24788877
Q ss_pred ecccCC
Q 024228 143 TCSVMG 148 (270)
Q Consensus 143 ~~~~~~ 148 (270)
-++...
T Consensus 175 GNg~~d 180 (421)
T 1cpy_A 175 GNGLTD 180 (421)
T ss_dssp ESCCCC
T ss_pred cCcccC
Confidence 766544
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.07 E-value=7.2e-10 Score=90.44 Aligned_cols=118 Identities=17% Similarity=0.106 Sum_probs=74.3
Q ss_pred cCCeEEEEEecCCC-CCCceEEEeCCCC---CcccccHHHHHHHhhc-c-ceEEeecCC----CCCCCCCCC----CCCC
Q 024228 29 EPGTILNIWVPKKT-TKKHAVVLLHPFG---FDGILTWQFQVLALAK-T-YEVYVPDFL----FFGSSVTDR----PDRT 94 (270)
Q Consensus 29 ~~g~~l~~~~~~~~-~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~-~-~~v~~~d~~----g~G~s~~~~----~~~~ 94 (270)
.|+..+.++.+... .+.|+||++||++ ++.. .+......|++ . +.|+.+|+| |++.+.... ....
T Consensus 80 edcL~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~-~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~g 158 (489)
T 1qe3_A 80 EDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGS-EPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 158 (489)
T ss_dssp SCCCEEEEEEECSSCCSEEEEEEECCSTTTSCCTT-SGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHH
T ss_pred CCCCEEEEEeCCCCCCCCCEEEEECCCccccCCCC-CcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcc
Confidence 36778888877542 3368999999976 3333 32223444544 3 999999999 565553321 1112
Q ss_pred hHHHHHHHHHHHH---Hh--CCCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 95 ASFQAECMAKGLR---KL--GVEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 95 ~~~~~~~~~~~l~---~~--~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
..+....+..+.+ .+ +.++++|+|+|+||.+++.++... ++.++++|+.++..
T Consensus 159 l~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 159 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 2232222222222 22 345899999999999988777653 46799999998876
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.06 E-value=3e-10 Score=103.32 Aligned_cols=198 Identities=16% Similarity=0.074 Sum_probs=117.5
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~G 122 (270)
..++++++|+.++... .|..+...|. .+.++.++.++ .+..++.+.+.++.+.. .++.++|||+|
T Consensus 1057 ~~~~L~~l~~~~g~~~-~y~~la~~L~-~~~v~~l~~~~------------~~~~~~~~~~~i~~~~~~gp~~l~G~S~G 1122 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGL-MYQNLSSRLP-SYKLCAFDFIE------------EEDRLDRYADLIQKLQPEGPLTLFGYSAG 1122 (1304)
T ss_dssp SCCEEECCCCTTCBGG-GGHHHHTTCC-SCEEEECBCCC------------STTHHHHHHHHHHHHCCSSCEEEEEETTH
T ss_pred cCCcceeecccccchH-HHHHHHhccc-ccceEeecccC------------HHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 4678999999999888 8888888887 78888887632 23445556666666653 58999999999
Q ss_pred HHHHHHHHhhCc---cccccEEEecccCCCCchhhh---------Hhhhhccch--hhhhhcccccHHHHHHHHHhhhhc
Q 024228 123 GMVGFKMAEMYP---DLVESMVVTCSVMGLTESVSN---------AALERIGYE--SWVDFLLPKTADALKVQFDIACYK 188 (270)
Q Consensus 123 g~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
|.+|..+|.+.. ..+..++++++.......... ......... .....+.......+...+....
T Consensus 1123 g~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 1200 (1304)
T 2vsq_A 1123 CSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYV-- 1200 (1304)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-----CHHHHHHHHHTTCC-------CTTTGGGHHHHHHHHHHHH--
T ss_pred chHHHHHHHHHHhCCCceeEEEEecCcccccccccccccchhhHHHHHHhhhhhhhhcchhcchHHHHHHHHHHHHHH--
Confidence 999999987643 458888888865432211000 000000000 0000011111111111111110
Q ss_pred CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch--HhHHHHHHHHHHhhh
Q 024228 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP--FVYNRQLKTILASLV 263 (270)
Q Consensus 189 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~~~~ 263 (270)
.... ...+.+|++++.|+.|.. +.+....+.+......+++.++| +|+.+++.+ +.+++.|.+||.+..
T Consensus 1201 -~~~~---~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~G-~H~~ml~~~~~~~~a~~l~~~L~~~~ 1271 (1304)
T 2vsq_A 1201 -NLIS---TGQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGFG-THAEMLQGETLDRNAEILLEFLNTQT 1271 (1304)
T ss_dssp -C--------CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECSS-CTTGGGSHHHHHHHHHHHHHHHHCCC
T ss_pred -HHhc---cCCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeCC-CHHHHCCCHHHHHHHHHHHHHHhccc
Confidence 1100 034458999999998863 22222233333434678899985 999888654 588899999998654
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-09 Score=88.72 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=78.7
Q ss_pred ecCCeEEEEEecCCC-CCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCC----CCCCCCCCCC---C--
Q 024228 28 IEPGTILNIWVPKKT-TKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFL----FFGSSVTDRP---D-- 92 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~-~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~----g~G~s~~~~~---~-- 92 (270)
.+|+..+.++.+... .+.|+||++||++ ++.. .+......|+++ +.|+++|+| |++.+..... .
T Consensus 81 ~edcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~ 159 (498)
T 2ogt_A 81 SEDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGS-SPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQA 159 (498)
T ss_dssp BSCCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTT-CGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTG
T ss_pred CCCCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCC-CCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCC
Confidence 347888888887532 3468999999988 4444 322334555543 999999999 8887764321 1
Q ss_pred --CChHHHHHHHHHHHHH---hC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccCC
Q 024228 93 --RTASFQAECMAKGLRK---LG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMG 148 (270)
Q Consensus 93 --~~~~~~~~~~~~~l~~---~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~ 148 (270)
..+.+....+..+.+. ++ .++|+|+|+|.||.+++.++... +..++++|+.++...
T Consensus 160 ~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 160 GNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 1122333333222232 23 45799999999999998877653 346999999998654
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.1e-08 Score=73.64 Aligned_cols=127 Identities=15% Similarity=0.023 Sum_probs=90.3
Q ss_pred eeEEEeec--CCeEEEEEecCCC---CCCceEEEeCCCCCcccccH-HHHHH------------------HhhccceEEe
Q 024228 22 TQRTIEIE--PGTILNIWVPKKT---TKKHAVVLLHPFGFDGILTW-QFQVL------------------ALAKTYEVYV 77 (270)
Q Consensus 22 ~~~~i~~~--~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~-~~~~~------------------~l~~~~~v~~ 77 (270)
..-++.+. .|..+.||..... ..+|.+|+++|+++++. .+ ..+.+ .+.+..+++.
T Consensus 20 ~sGy~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlf 98 (255)
T 1whs_A 20 YSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSS-VAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLF 98 (255)
T ss_dssp EEEEEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCT-TTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEE
T ss_pred EEEEEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHH-HHHHHHhccCCeEecCCCCeeeeCcccccccCCEEE
Confidence 44566665 5788888755432 46799999999999888 65 43321 1233488999
Q ss_pred ecC-CCCCCCCCCCC----CCChHHHHHHHHHHHHH-------hCCCceEEEEEchhHHHHHHHHhhC------cccccc
Q 024228 78 PDF-LFFGSSVTDRP----DRTASFQAECMAKGLRK-------LGVEKCTLVGVSYGGMVGFKMAEMY------PDLVES 139 (270)
Q Consensus 78 ~d~-~g~G~s~~~~~----~~~~~~~~~~~~~~l~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~ 139 (270)
+|. .|.|.|..... ..+.+..++|+.++++. +...+++|.|+|+||..+..+|... .-.+++
T Consensus 99 iDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkG 178 (255)
T 1whs_A 99 LDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKG 178 (255)
T ss_dssp ECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred EecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccce
Confidence 996 59999865432 24667778888777764 3456899999999999988777642 135789
Q ss_pred EEEecccCCC
Q 024228 140 MVVTCSVMGL 149 (270)
Q Consensus 140 ~i~~~~~~~~ 149 (270)
+++.++....
T Consensus 179 i~ign~~~d~ 188 (255)
T 1whs_A 179 FMVGNGLIDD 188 (255)
T ss_dssp EEEEEECCBH
T ss_pred EEecCCccCH
Confidence 9999887653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.7e-08 Score=77.57 Aligned_cols=146 Identities=11% Similarity=0.078 Sum_probs=76.5
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-Hhhhhccc--hhh------hhhcccccHHHHHH
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-AALERIGY--ESW------VDFLLPKTADALKV 180 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-~~~~~~~~--~~~------~~~~~~~~~~~~~~ 180 (270)
+.++|.++|||+||..++.+++..+ ||+.+|..++.......... ......+. ... ..++.+. +..
T Consensus 217 D~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~----f~~ 291 (433)
T 4g4g_A 217 DTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGGAACWRISDQQKAAGANIQTAAQIITENPWFSRN----FDP 291 (433)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCTT----TGG
T ss_pred ChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCchhhhhhchhhcccCcchhhhhcccCCccccchh----hHh
Confidence 3468999999999999999999875 79999998865432221110 00000000 000 0011110 000
Q ss_pred HHHhhhhcCCCChhhhhhhhh-eeeeEEEcCCCccCCHHHH-------HHHHHHhc--CCceEEEecCCCccee-ecchH
Q 024228 181 QFDIACYKLPTLPAFVYKHIL-EKIHLLWGENDKIFDMQVA-------RNLKEQVG--QNATMESIEKAGHLVN-LERPF 249 (270)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~ 249 (270)
+.. ...........+..-+. .|+|++.| +|...+++.. +..++.+. .+..+....+.+|+.+ .++.+
T Consensus 292 y~~-~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~~r~ 369 (433)
T 4g4g_A 292 HVN-SITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPVSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSSQNQ 369 (433)
T ss_dssp GTT-CGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGGGHH
T ss_pred hcc-ccccCCcCHHHHHHhhCCceEEEecC-CCCcCCcHHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHHHHH
Confidence 000 00000111111111111 68999999 8888876533 23344443 3456655555577653 35567
Q ss_pred hHHHHHHHHHHhh
Q 024228 250 VYNRQLKTILASL 262 (270)
Q Consensus 250 ~~~~~i~~fl~~~ 262 (270)
++.+.+.+||+..
T Consensus 370 ~~~~F~~k~Lkg~ 382 (433)
T 4g4g_A 370 DLNSYINYFLLGQ 382 (433)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCC
Confidence 7777888887654
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.1e-07 Score=73.14 Aligned_cols=160 Identities=12% Similarity=0.048 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHh--------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh-hhhcc--c
Q 024228 95 ASFQAECMAKGLRKL--------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-LERIG--Y 163 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~--------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-~~~~~--~ 163 (270)
+..++-++..+++.+ +.++|.++|||+||..++.+++..+ ||+.+|..++............ ....+ .
T Consensus 160 l~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G~~~~R~~~~~~~~Ge~v 238 (375)
T 3pic_A 160 MTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGGSACWRISDYLKSQGANI 238 (375)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTTSCHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCchhhhhhhhhhcccCccc
Confidence 334444565555554 2358999999999999999999875 7999999876543221111000 00000 0
Q ss_pred hhh------hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh-eeeeEEEcCCCccCCHHHH-------HHHHHHhc-
Q 024228 164 ESW------VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL-EKIHLLWGENDKIFDMQVA-------RNLKEQVG- 228 (270)
Q Consensus 164 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~-------~~~~~~~~- 228 (270)
... ..++.+ .+..+.. ...........++.-+. .|+|++.| +|..++++-. +..++.+.
T Consensus 239 ~~~~~~~~e~~Wf~~----~~~~y~~-~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g~~~~~~~a~~VY~~lG~ 312 (375)
T 3pic_A 239 QTASEIIGEDPWFST----TFNSYVN-QVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQSCFGCMTAAHMAWQALGV 312 (375)
T ss_dssp CCHHHHTTTCSCSCG----GGGGTTT-CGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccccCccccccc----chhhhcc-cccccCcCHHHHHHHhCCceEEEecC-CCcccCcHHHHHHHHHHHHHHHHcCC
Confidence 000 000100 0000000 00000111111111111 68999999 9988887543 33344443
Q ss_pred -CCceEEEecCCCcce-eecchHhHHHHHHHHHHh
Q 024228 229 -QNATMESIEKAGHLV-NLERPFVYNRQLKTILAS 261 (270)
Q Consensus 229 -~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~ 261 (270)
.+..+....+.+|+. ..+..+++.+.+.+||+.
T Consensus 313 ~d~~~~~~~ggH~Hc~fp~~~~~~~~~F~~k~L~~ 347 (375)
T 3pic_A 313 SDHMGYSQIGAHAHCAFPSNQQSQLTAFVQKFLLG 347 (375)
T ss_dssp GGGEEEECCSCCSTTCCCGGGHHHHHHHHHHHTSC
T ss_pred ccceEEEeeCCCccccCCHHHHHHHHHHHHHHhCC
Confidence 345565434446644 345556777777777765
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.81 E-value=2e-08 Score=83.03 Aligned_cols=120 Identities=16% Similarity=0.047 Sum_probs=73.9
Q ss_pred ecCCeEEEEEecCCC--CCCceEEEeCCCCCccc--ccHHHHHHHhhc-c-ceEEeecCC----CCCCCC---CCCCCCC
Q 024228 28 IEPGTILNIWVPKKT--TKKHAVVLLHPFGFDGI--LTWQFQVLALAK-T-YEVYVPDFL----FFGSSV---TDRPDRT 94 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~-~-~~v~~~d~~----g~G~s~---~~~~~~~ 94 (270)
.+|+..+.++.+... .+.|+||++||++.... .........|++ . +.|+.+|+| |++.+. .......
T Consensus 93 ~edcl~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g 172 (543)
T 2ha2_A 93 SEDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG 172 (543)
T ss_dssp ESCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH
T ss_pred CCcCCeEEEeecCCCCCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCccc
Confidence 458888998887643 23489999999773322 011222345554 3 999999999 444432 1111222
Q ss_pred hHHHHHHHHHHHHH---hC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 95 ASFQAECMAKGLRK---LG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 95 ~~~~~~~~~~~l~~---~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
+.+....+..+.+. ++ .++|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 173 l~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 33333333222222 33 45899999999999987766543 45799999998854
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.80 E-value=2.2e-08 Score=82.52 Aligned_cols=120 Identities=16% Similarity=0.097 Sum_probs=75.0
Q ss_pred ecCCeEEEEEecCCC-CCCceEEEeCCCCCccc--ccHHHHHHHhhc-c-ceEEeecCC----CCCCCCC-C--CCCCCh
Q 024228 28 IEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGI--LTWQFQVLALAK-T-YEVYVPDFL----FFGSSVT-D--RPDRTA 95 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~-~-~~v~~~d~~----g~G~s~~-~--~~~~~~ 95 (270)
.+|...+.++.+... .+.|+||++||++.... .........|++ . +.|+++|+| |++.+.. + .....+
T Consensus 89 ~edcl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl 168 (529)
T 1p0i_A 89 SEDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGL 168 (529)
T ss_dssp CSCCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHH
T ss_pred CCcCCeEEEeeCCCCCCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccH
Confidence 347888888887653 45689999999763222 021122345554 3 999999999 4444411 1 112223
Q ss_pred HHHHHHHHHHHH---HhC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 96 SFQAECMAKGLR---KLG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 96 ~~~~~~~~~~l~---~~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
.+....+..+.+ .++ .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 169 ~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 333333332222 233 34799999999999998877653 35799999998865
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.74 E-value=2.9e-08 Score=81.90 Aligned_cols=121 Identities=18% Similarity=0.091 Sum_probs=75.0
Q ss_pred ecCCeEEEEEecCCC-CCCceEEEeCCCCCccc--ccHHHHHHHhh-cc-ceEEeecCC----CCCCCC-C--CCCCCCh
Q 024228 28 IEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGI--LTWQFQVLALA-KT-YEVYVPDFL----FFGSSV-T--DRPDRTA 95 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~--~~~~~~~~~l~-~~-~~v~~~d~~----g~G~s~-~--~~~~~~~ 95 (270)
.+|...+.++.+... .+.|+||++||++.... .........|+ +. +.|+++++| |+..+. . ......+
T Consensus 91 sedcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl 170 (537)
T 1ea5_A 91 SEDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170 (537)
T ss_dssp CSCCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHH
T ss_pred CCcCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCcccc
Confidence 347888888887653 45689999999763322 02112234555 44 999999999 444331 1 1122223
Q ss_pred HHHHHHHHHHHHH---hC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 96 SFQAECMAKGLRK---LG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 96 ~~~~~~~~~~l~~---~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
.+....+..+.+. ++ .++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 171 ~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 171 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 3333333333232 33 4589999999999998877664 2357999999988653
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=7.1e-08 Score=79.78 Aligned_cols=119 Identities=21% Similarity=0.131 Sum_probs=74.3
Q ss_pred ecCCeEEEEEecCCC---CCCceEEEeCCCCCccc--ccHHHHHHHhhc--cceEEeecCC----CCCCCCCCC--CCCC
Q 024228 28 IEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGI--LTWQFQVLALAK--TYEVYVPDFL----FFGSSVTDR--PDRT 94 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~--~~~v~~~d~~----g~G~s~~~~--~~~~ 94 (270)
.+|+..+.++.+... .+.|+||++||++.... ..|.. ..|+. .+.|+.+|+| |++.+.... ....
T Consensus 95 ~edcl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~g 172 (542)
T 2h7c_A 95 SEDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWG 172 (542)
T ss_dssp ESCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHH
T ss_pred CCCCcEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCccchh
Confidence 458888988887542 34689999999763322 12322 22433 3999999999 454443221 1222
Q ss_pred hHHHHHHHHHHHH---HhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 95 ASFQAECMAKGLR---KLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 95 ~~~~~~~~~~~l~---~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
..+....+..+.+ .++ .++|.|+|+|.||..+..++.. .++.++++|+.++...
T Consensus 173 l~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 173 HLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 3333222222222 233 3589999999999999888775 2567999999987654
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.64 E-value=1e-07 Score=78.42 Aligned_cols=121 Identities=15% Similarity=0.102 Sum_probs=71.8
Q ss_pred ecCCeEEEEEecCCC---CCCceEEEeCCCCCccc--ccHHH--HHHHhhccceEEeecCC----CCCCCCCC----CCC
Q 024228 28 IEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGI--LTWQF--QVLALAKTYEVYVPDFL----FFGSSVTD----RPD 92 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~--~~~~~--~~~~l~~~~~v~~~d~~----g~G~s~~~----~~~ 92 (270)
.+|...+.++.+... .+.|+||++||++.... ..|.. ++......+.|+++|+| |++.+... ...
T Consensus 82 ~edcl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n 161 (522)
T 1ukc_A 82 SEDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLN 161 (522)
T ss_dssp ESCCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTT
T ss_pred CCcCCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCC
Confidence 347788888887532 34589999999864322 12322 22222234999999999 44443311 112
Q ss_pred CChHHHHHHHHHHHH---HhC--CCceEEEEEchhHHHHHHHHhhC----ccccccEEEecccCC
Q 024228 93 RTASFQAECMAKGLR---KLG--VEKCTLVGVSYGGMVGFKMAEMY----PDLVESMVVTCSVMG 148 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~---~~~--~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~i~~~~~~~ 148 (270)
..+.+....+..+.+ .++ .++|.|+|+|.||..+...+... +..++++|+.++...
T Consensus 162 ~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 162 AGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 223333333322222 223 35899999999998776655543 457899999887643
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.62 E-value=5.2e-08 Score=80.66 Aligned_cols=120 Identities=18% Similarity=0.111 Sum_probs=72.7
Q ss_pred ecCCeEEEEEec-----CCC--CC----CceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCCC----CCCCCCC
Q 024228 28 IEPGTILNIWVP-----KKT--TK----KHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLF----FGSSVTD 89 (270)
Q Consensus 28 ~~~g~~l~~~~~-----~~~--~~----~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g----~G~s~~~ 89 (270)
.+|...+.++.+ ... .+ .|+||++||++.... .........|++. +.|+++|+|. +..+...
T Consensus 87 ~edcL~lnv~~P~~~~~~~~~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~ 166 (551)
T 2fj0_A 87 SEACIHANIHVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNST 166 (551)
T ss_dssp CSCCCEEEEEEEGGGCCCC--------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSS
T ss_pred CCCCeEEEEEecCccccccccccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCccc
Confidence 347788888887 321 23 589999999653222 0212233455555 9999999994 2322211
Q ss_pred --CCCCChHHHHHHHHHHHHH---hC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccC
Q 024228 90 --RPDRTASFQAECMAKGLRK---LG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVM 147 (270)
Q Consensus 90 --~~~~~~~~~~~~~~~~l~~---~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~ 147 (270)
.....+.+....+..+.+. ++ .++|+|+|+|.||.+++.++.. .+..++++|+.++..
T Consensus 167 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 167 SVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 1122233333333322222 33 4579999999999999888765 345799999998864
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=3.1e-06 Score=63.63 Aligned_cols=127 Identities=14% Similarity=0.042 Sum_probs=90.0
Q ss_pred eeEEEeecCCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHHH------------------hhccceEEeecC
Q 024228 22 TQRTIEIEPGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVLA------------------LAKTYEVYVPDF 80 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~------------------l~~~~~v~~~d~ 80 (270)
..-+|++.++..+.||...+ +...|.+|++.|+++.+. .+..+.+. +.+..+++.+|.
T Consensus 24 ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS-~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~ 102 (300)
T 4az3_A 24 YSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 102 (300)
T ss_dssp EEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHhcCCCceecCCCccccccCccHHhhhcchhhcC
Confidence 45568887889998876543 245799999999999887 66443321 112378999997
Q ss_pred C-CCCCCCCCCC--CCChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhCc----cccccEEEeccc
Q 024228 81 L-FFGSSVTDRP--DRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMYP----DLVESMVVTCSV 146 (270)
Q Consensus 81 ~-g~G~s~~~~~--~~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~i~~~~~ 146 (270)
| |.|.|..... ..+..+.++|+..++... ...+++|.|.|+||..+-.+|...- -.++++++-++.
T Consensus 103 PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 103 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp STTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 7 8888865443 245666777777766542 4568999999999999888776422 247888888877
Q ss_pred CCC
Q 024228 147 MGL 149 (270)
Q Consensus 147 ~~~ 149 (270)
...
T Consensus 183 ~d~ 185 (300)
T 4az3_A 183 SSY 185 (300)
T ss_dssp SBH
T ss_pred cCH
Confidence 653
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=4.4e-07 Score=74.86 Aligned_cols=120 Identities=15% Similarity=0.052 Sum_probs=70.8
Q ss_pred ecCCeEEEEEecCCC---CCCceEEEeCCCCCccc--ccH--HHHH-HHhhc--cceEEeecCCCC----CCCC----CC
Q 024228 28 IEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGI--LTW--QFQV-LALAK--TYEVYVPDFLFF----GSSV----TD 89 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~--~~~--~~~~-~~l~~--~~~v~~~d~~g~----G~s~----~~ 89 (270)
.+|...+.++.+... .+.|+||++||++.... ..| ..++ ..++. .+.|+++|+|.- ..+. ..
T Consensus 94 sedcl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~ 173 (534)
T 1llf_A 94 SEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG 173 (534)
T ss_dssp CSCCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT
T ss_pred CCCCeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccC
Confidence 347788888887542 34589999999874333 122 2233 33333 399999999942 1111 00
Q ss_pred CCCCChHHHHHHHHHHHH---HhC--CCceEEEEEchhHHHHHHHHhhC--------ccccccEEEecccC
Q 024228 90 RPDRTASFQAECMAKGLR---KLG--VEKCTLVGVSYGGMVGFKMAEMY--------PDLVESMVVTCSVM 147 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~---~~~--~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~i~~~~~~ 147 (270)
.....+.+....+..+.+ .++ .++|.|+|+|.||..+...+... +..++++|+.++..
T Consensus 174 ~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 174 SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 111223333333332322 233 45899999999998776655543 45789999998753
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.51 E-value=6.4e-07 Score=74.07 Aligned_cols=120 Identities=16% Similarity=0.062 Sum_probs=72.2
Q ss_pred ecCCeEEEEEecCCC---CCCceEEEeCCCCCccc--ccH--HHHH-HHhhcc--ceEEeecCCCC----CCCCC----C
Q 024228 28 IEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGI--LTW--QFQV-LALAKT--YEVYVPDFLFF----GSSVT----D 89 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~--~~~--~~~~-~~l~~~--~~v~~~d~~g~----G~s~~----~ 89 (270)
.+|...+.++.+... .+.|+||++||++.... ..| ..++ +.++.. +.|+.+|+|.- ..+.. .
T Consensus 102 sedcl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~ 181 (544)
T 1thg_A 102 NEDCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEG 181 (544)
T ss_dssp CSCCCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT
T ss_pred CCCCeEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccC
Confidence 347888888887542 34589999999764333 122 2233 334433 99999999942 11100 0
Q ss_pred CCCCChHHHHHHHHHHHHH---hC--CCceEEEEEchhHHHHHHHHhhC--------ccccccEEEecccC
Q 024228 90 RPDRTASFQAECMAKGLRK---LG--VEKCTLVGVSYGGMVGFKMAEMY--------PDLVESMVVTCSVM 147 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~---~~--~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~i~~~~~~ 147 (270)
.....+.+....+..+.+. ++ .++|.|+|+|.||..++..+... +..++++|+.++..
T Consensus 182 ~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 182 NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 1112233333333333232 23 45899999999999887766642 45789999998753
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.2e-08 Score=97.20 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=0.0
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~G 122 (270)
.+++++|+|+.++... .|..+.+.|. ..++.+.+|| .....+++.+++++.+.++.+. ..++.++|||+|
T Consensus 2241 ~~~~Lfc~~~agG~~~-~y~~l~~~l~--~~v~~lq~pg------~~~~~~i~~la~~~~~~i~~~~p~gpy~L~G~S~G 2311 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSIT-VFHGLAAKLS--IPTYGLQCTG------AAPLDSIQSLASYYIECIRQVQPEGPYRIAGYSYG 2311 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHH-HHHHHHHhhC--CcEEEEecCC------CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHh
Confidence 3578999999999888 8888888875 6788888886 1223466777777777666654 458999999999
Q ss_pred HHHHHHHHhhCcc---ccc---cEEEecc
Q 024228 123 GMVGFKMAEMYPD---LVE---SMVVTCS 145 (270)
Q Consensus 123 g~~a~~~a~~~p~---~v~---~~i~~~~ 145 (270)
|.+|..+|.+... .+. .++++++
T Consensus 2312 g~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2312 ACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp -----------------------------
T ss_pred HHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 9999999876432 343 5666665
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=5.2e-06 Score=67.37 Aligned_cols=115 Identities=19% Similarity=0.135 Sum_probs=81.2
Q ss_pred EEEEEecCC---CCCCceEEEeCCCCCcccccHH--HHHHHhhcc--ceEEeecCCCCCCCCCC---------CCCCChH
Q 024228 33 ILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQ--FQVLALAKT--YEVYVPDFLFFGSSVTD---------RPDRTAS 96 (270)
Q Consensus 33 ~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~--~~v~~~d~~g~G~s~~~---------~~~~~~~ 96 (270)
+.+|+.... .+++|.+|++-| -++....+. .+...+++. -.++.+++|-+|.|.+- ....+.+
T Consensus 28 ~QRY~~n~~~~~~~~gPIfl~~gG-Eg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~e 106 (472)
T 4ebb_A 28 PQRFLVSDRFWVRGEGPIFFYTGN-EGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVE 106 (472)
T ss_dssp EEEEEEECTTCCTTTCCEEEEECC-SSCHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHH
T ss_pred EEEEEEecceeCCCCCcEEEEECC-CccccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHH
Confidence 456766543 123566666654 333331221 134455655 78999999999999752 1226788
Q ss_pred HHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 97 FQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 97 ~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+...|+..+++.+. ..+++++|-|+||++|..+-.++|+.|.+.+..+++..
T Consensus 107 QALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 107 QALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 88899988888762 24899999999999999999999999999998877643
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=5.9e-07 Score=74.94 Aligned_cols=104 Identities=16% Similarity=-0.047 Sum_probs=60.6
Q ss_pred CCceEEEeCCCCCccc--ccHHHHHHHhhc-c-ceEEeecCC----CCCCCCC---------CCCCCChHHHHHHHHHHH
Q 024228 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAK-T-YEVYVPDFL----FFGSSVT---------DRPDRTASFQAECMAKGL 106 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~-~-~~v~~~d~~----g~G~s~~---------~~~~~~~~~~~~~~~~~l 106 (270)
+.|+||++||++.... .........|++ . +.|+.+|+| |+..... ......+.+....+..+.
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~ 219 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLK 219 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHH
Confidence 4589999999763322 022222345544 3 999999999 4433211 111122233322222222
Q ss_pred H---HhC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 107 R---KLG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 107 ~---~~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
+ .++ .++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 220 ~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 220 DNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 2 223 35899999999999887666542 35689999988764
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.45 E-value=7.6e-07 Score=74.01 Aligned_cols=119 Identities=20% Similarity=0.112 Sum_probs=71.7
Q ss_pred ecCCeEEEEEecCCC----CCCceEEEeCCCCCcccccH---------HHHHHHhhc-c-ceEEeecCC----CCCCCCC
Q 024228 28 IEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTW---------QFQVLALAK-T-YEVYVPDFL----FFGSSVT 88 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~---------~~~~~~l~~-~-~~v~~~d~~----g~G~s~~ 88 (270)
.+|...+.++.+... .+.|+||++||++.... .- ......|+. . +.|+.+|+| |++.+..
T Consensus 77 sedcl~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~G-s~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~ 155 (579)
T 2bce_A 77 NEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMG-ASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD 155 (579)
T ss_dssp CSCCCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC--------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSS
T ss_pred CCCCCEEEEEECCCCCCCCCCCeEEEEECCCcccCC-CCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCC
Confidence 347788888877532 34589999999874332 11 111234443 3 999999999 4443321
Q ss_pred CC--CCCChHHHHHHHHHHHH---HhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccC
Q 024228 89 DR--PDRTASFQAECMAKGLR---KLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVM 147 (270)
Q Consensus 89 ~~--~~~~~~~~~~~~~~~l~---~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~ 147 (270)
.. ....+.+....+..+.+ .++ .++|.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 156 ~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 156 SNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 11 11224444333333323 333 3589999999999998877654 245688999887643
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=9.2e-07 Score=73.61 Aligned_cols=116 Identities=17% Similarity=0.118 Sum_probs=70.9
Q ss_pred cCCeEEEEEecCCC------CCCceEEEeCCCCCccc--ccHHHHHHHhhc-c-ceEEeecCC----CCCCCCCC--CCC
Q 024228 29 EPGTILNIWVPKKT------TKKHAVVLLHPFGFDGI--LTWQFQVLALAK-T-YEVYVPDFL----FFGSSVTD--RPD 92 (270)
Q Consensus 29 ~~g~~l~~~~~~~~------~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~-~-~~v~~~d~~----g~G~s~~~--~~~ 92 (270)
+|...+.++.+... .+.|+||++||++.... ..+.. ..|++ . +.|+++|+| |+..+... ...
T Consensus 109 EdcL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n 186 (574)
T 3bix_A 109 EDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGN 186 (574)
T ss_dssp SCCCEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCC
T ss_pred CcCCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCc
Confidence 47788888877542 24689999999774433 12222 33444 3 999999999 33332211 122
Q ss_pred CChHHHHHHHHHHHHH---hC--CCceEEEEEchhHHHHHHHHhhCc---cccccEEEeccc
Q 024228 93 RTASFQAECMAKGLRK---LG--VEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSV 146 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~---~~--~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~ 146 (270)
..+.+....+..+.+. ++ .++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 187 ~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 187 YGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 2333433333333332 33 357999999999999988776543 457888888754
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.14 E-value=7e-05 Score=55.50 Aligned_cols=126 Identities=13% Similarity=0.022 Sum_probs=80.5
Q ss_pred eeEEEeec--CCeEEEEEecCC----CCCCceEEEeCCCCCcccccH-HHHHH-----------H-------hhccceEE
Q 024228 22 TQRTIEIE--PGTILNIWVPKK----TTKKHAVVLLHPFGFDGILTW-QFQVL-----------A-------LAKTYEVY 76 (270)
Q Consensus 22 ~~~~i~~~--~g~~l~~~~~~~----~~~~~~vv~~hG~~~~~~~~~-~~~~~-----------~-------l~~~~~v~ 76 (270)
..-++.+. .|..+.||.... +..+|.+|+++|++|++. .+ ..+.+ . +.+..+++
T Consensus 25 ~sGyv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anll 103 (270)
T 1gxs_A 25 YGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSS-IGLGAMQELGAFRVHTNGESLLLNEYAWNKAANIL 103 (270)
T ss_dssp EEEEEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCT-TTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEE
T ss_pred EEEEEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccc-hhhhhHHhccCceecCCCCcceeCccchhccccEE
Confidence 34566664 467888865443 245799999999999888 64 43321 0 22337899
Q ss_pred eecC-CCCCCCCCCCC---CCChHHHHHHHHHHHHH-------hCCCceEEEEEchhHHHHHHHH---hhC----ccccc
Q 024228 77 VPDF-LFFGSSVTDRP---DRTASFQAECMAKGLRK-------LGVEKCTLVGVSYGGMVGFKMA---EMY----PDLVE 138 (270)
Q Consensus 77 ~~d~-~g~G~s~~~~~---~~~~~~~~~~~~~~l~~-------~~~~~~~l~G~S~Gg~~a~~~a---~~~----p~~v~ 138 (270)
.+|. .|.|.|..... ..+.+..++|+.++++. +...+++|.|.| |-++...+. ... .-.++
T Consensus 104 fiDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLk 182 (270)
T 1gxs_A 104 FAESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQ 182 (270)
T ss_dssp EECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEE
T ss_pred EEeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeee
Confidence 9995 59999865432 23445567777666654 344689999999 644433322 111 12478
Q ss_pred cEEEecccCCC
Q 024228 139 SMVVTCSVMGL 149 (270)
Q Consensus 139 ~~i~~~~~~~~ 149 (270)
++++.++....
T Consensus 183 Gi~ign~~~d~ 193 (270)
T 1gxs_A 183 GLLVSSGLTND 193 (270)
T ss_dssp EEEEESCCCBH
T ss_pred eEEEeCCccCh
Confidence 99998887653
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.2e-05 Score=60.17 Aligned_cols=82 Identities=11% Similarity=-0.012 Sum_probs=49.7
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEe-ecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHh----CCCceE
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYV-PDFLFFGSSVTDRPD-RTASFQAECMAKGLRKL----GVEKCT 115 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~-~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~----~~~~~~ 115 (270)
..+..||.+||... +.+.+.+. +.+.. .|.++.+ ....+. .....+.+++.+.++.+ ...+++
T Consensus 72 ~~~~iVva~RGT~~--------~~d~l~d~~~~~~~~~~~~~~~--~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 141 (269)
T 1tib_A 72 TNKLIVLSFRGSRS--------IENWIGNLNFDLKEINDICSGC--RGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVV 141 (269)
T ss_dssp TTTEEEEEECCCSC--------THHHHTCCCCCEEECTTTSTTC--EEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCEEEEEEeCCCC--------HHHHHHhcCeeeeecCCCCCCC--EecHHHHHHHHHHHHHHHHHHHHHHHHCCCceEE
Confidence 35678889999753 23344554 66655 4555311 000000 12334455666655544 345899
Q ss_pred EEEEchhHHHHHHHHhhCc
Q 024228 116 LVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p 134 (270)
+.||||||.+|..++....
T Consensus 142 l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 142 FTGHSLGGALATVAGADLR 160 (269)
T ss_dssp EEEETHHHHHHHHHHHHHT
T ss_pred EecCChHHHHHHHHHHHHH
Confidence 9999999999999998754
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.92 E-value=4.9e-05 Score=57.00 Aligned_cols=62 Identities=10% Similarity=0.004 Sum_probs=36.3
Q ss_pred cceEEeecCCCCCCCCCCCC-CCChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhC
Q 024228 72 TYEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 72 ~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
...+...++||........+ ......+.+++.+.++.+ ...+++++||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 45666677776311110000 123334455555544443 334699999999999999888765
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.91 E-value=3e-05 Score=52.65 Aligned_cols=61 Identities=25% Similarity=0.337 Sum_probs=54.4
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc-----------------------CCceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG-----------------------QNATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
+++||.+|+.|.+++.--.+.+.+.+. .+.++..+.+|||+...++|++..+.+..|
T Consensus 65 irvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~f 144 (153)
T 1whs_B 65 LRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQYF 144 (153)
T ss_dssp CEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHHH
T ss_pred ceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHHH
Confidence 799999999999999988888888774 257788999999999999999999999999
Q ss_pred HHhh
Q 024228 259 LASL 262 (270)
Q Consensus 259 l~~~ 262 (270)
|...
T Consensus 145 l~~~ 148 (153)
T 1whs_B 145 LQGK 148 (153)
T ss_dssp HHTC
T ss_pred HCCC
Confidence 9754
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00011 Score=53.82 Aligned_cols=101 Identities=9% Similarity=-0.045 Sum_probs=62.5
Q ss_pred CCceEEEeCCCCCccc---ccHHHHHHHhhccceEEee-cCCCCCCCCCCCCCCChHHHHHHHHHHHHH----hCCCceE
Q 024228 44 KKHAVVLLHPFGFDGI---LTWQFQVLALAKTYEVYVP-DFLFFGSSVTDRPDRTASFQAECMAKGLRK----LGVEKCT 115 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~~~v~~~-d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~ 115 (270)
++|+|++.+|.+.... .....+++.|.+.+..-.+ +||-.... ...+..+-+.++...++. -...+++
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~~----y~~S~~~G~~~~~~~i~~~~~~CP~tkiV 77 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAFP----MWPSVEKGVAELILQIELKLDADPYADFA 77 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSSS----CHHHHHHHHHHHHHHHHHHHHHCTTCCEE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCcccC----ccchHHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 4799999999877422 1245666777655655555 36533211 001223334444444443 3456899
Q ss_pred EEEEchhHHHHHHHHhh-----------CccccccEEEecccCC
Q 024228 116 LVGVSYGGMVGFKMAEM-----------YPDLVESMVVTCSVMG 148 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~-----------~p~~v~~~i~~~~~~~ 148 (270)
|.|+|.||.++-.++.. ..++|.++++++-+..
T Consensus 78 L~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 78 MAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp EEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred EEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 99999999999887755 2357888888875543
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00021 Score=53.81 Aligned_cols=82 Identities=15% Similarity=-0.023 Sum_probs=45.3
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHh----CCCceEE
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKL----GVEKCTL 116 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~----~~~~~~l 116 (270)
..+..||.+||.... . ..+.+- +.....|....|... .+. .....+.+++.+.++.+ ...++++
T Consensus 72 ~~~~iVvafRGT~~~-~-------d~~~d~~~~~~~~~~~~~~~vh--~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~v 141 (279)
T 1tia_A 72 TNSAVVLAFRGSYSV-R-------NWVADATFVHTNPGLCDGCLAE--LGFWSSWKLVRDDIIKELKEVVAQNPNYELVV 141 (279)
T ss_pred CCCEEEEEEeCcCCH-H-------HHHHhCCcEeecCCCCCCCccC--hhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEE
Confidence 457788999997632 1 222322 444444432111111 010 12223344444444433 3458999
Q ss_pred EEEchhHHHHHHHHhhCc
Q 024228 117 VGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p 134 (270)
.|||+||.+|..++....
T Consensus 142 tGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 142 VGHSLGAAVATLAATDLR 159 (279)
T ss_pred EecCHHHHHHHHHHHHHH
Confidence 999999999999888753
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00047 Score=46.89 Aligned_cols=60 Identities=18% Similarity=0.287 Sum_probs=51.2
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc----------------------------CCceEEEecCCCcceeecchHhHHH
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG----------------------------QNATMESIEKAGHLVNLERPFVYNR 253 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~gH~~~~~~~~~~~~ 253 (270)
+++|+.+|+.|.+++.--.+.+.+.+. .+.++..+.+|||+...++|+...+
T Consensus 64 irVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 143 (155)
T 4az3_B 64 YQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAFT 143 (155)
T ss_dssp CEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHHH
T ss_pred ceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHHH
Confidence 799999999999999888887777653 1234677889999999999999999
Q ss_pred HHHHHHHh
Q 024228 254 QLKTILAS 261 (270)
Q Consensus 254 ~i~~fl~~ 261 (270)
.+.+||..
T Consensus 144 m~~~fl~g 151 (155)
T 4az3_B 144 MFSRFLNK 151 (155)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999975
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00086 Score=50.18 Aligned_cols=36 Identities=14% Similarity=0.054 Sum_probs=25.9
Q ss_pred HHHHHHHHHHH----hCCCceEEEEEchhHHHHHHHHhhC
Q 024228 98 QAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 98 ~~~~~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
+.+++...++. ....++++.|||+||.+|..++...
T Consensus 119 ~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 119 VVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 34444444443 3446899999999999999888765
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0018 Score=44.05 Aligned_cols=61 Identities=21% Similarity=0.310 Sum_probs=51.6
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc--------------------------CCceEEEecCCCcceeecchHhHHHHH
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG--------------------------QNATMESIEKAGHLVNLERPFVYNRQL 255 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~i 255 (270)
.++||.+|+.|.+++.--.+.+.+.+. .+.++..+.+|||+...++|+...+.+
T Consensus 67 irVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m~ 146 (158)
T 1gxs_B 67 LRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLLF 146 (158)
T ss_dssp CEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHHH
T ss_pred CeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHHH
Confidence 799999999999999887777776652 124567889999999999999999999
Q ss_pred HHHHHhh
Q 024228 256 KTILASL 262 (270)
Q Consensus 256 ~~fl~~~ 262 (270)
.+||...
T Consensus 147 ~~fl~g~ 153 (158)
T 1gxs_B 147 KQFLKGE 153 (158)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 9999764
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0073 Score=42.42 Aligned_cols=81 Identities=15% Similarity=-0.032 Sum_probs=50.1
Q ss_pred HHHhhcc-ceEEee--cCCCCCCCCCCCCCCChHHHHHHHHHHH----HHhCCCceEEEEEchhHHHHHHHHhhCc----
Q 024228 66 VLALAKT-YEVYVP--DFLFFGSSVTDRPDRTASFQAECMAKGL----RKLGVEKCTLVGVSYGGMVGFKMAEMYP---- 134 (270)
Q Consensus 66 ~~~l~~~-~~v~~~--d~~g~G~s~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---- 134 (270)
...+... ..+..+ +||-.-..... ...+...-+.++...+ ..-...+++|+|+|.|+.++-.++...|
T Consensus 45 ~~~~g~~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~ 123 (197)
T 3qpa_A 45 ESAFGKDGVWIQGVGGAYRATLGDNAL-PRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIR 123 (197)
T ss_dssp HHHHCTTTEEEEECCTTCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHH
T ss_pred HHhcCCCceEEEeeCCCCcCCCCcccC-ccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHH
Confidence 3444323 778888 78754211100 1122333344444444 4445679999999999999988877655
Q ss_pred cccccEEEecccC
Q 024228 135 DLVESMVVTCSVM 147 (270)
Q Consensus 135 ~~v~~~i~~~~~~ 147 (270)
++|.++++++-+.
T Consensus 124 ~~V~avvlfGdP~ 136 (197)
T 3qpa_A 124 DKIAGTVLFGYTK 136 (197)
T ss_dssp TTEEEEEEESCTT
T ss_pred hheEEEEEeeCCc
Confidence 5789999987543
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0026 Score=45.37 Aligned_cols=102 Identities=10% Similarity=-0.072 Sum_probs=56.3
Q ss_pred eEEEeCCCCCccc-ccHHHHHHHhhcc---ceEEeecCCCCC-CCCCCCCCC--ChHHHHHHHHHHHHH----hCCCceE
Q 024228 47 AVVLLHPFGFDGI-LTWQFQVLALAKT---YEVYVPDFLFFG-SSVTDRPDR--TASFQAECMAKGLRK----LGVEKCT 115 (270)
Q Consensus 47 ~vv~~hG~~~~~~-~~~~~~~~~l~~~---~~v~~~d~~g~G-~s~~~~~~~--~~~~~~~~~~~~l~~----~~~~~~~ 115 (270)
.||+..|.+.... .....+...|.+. -.+..++||-.. .+......+ +..+=++++...++. -...+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 4566666554432 1223455555544 267778888642 211101111 122223444444443 3457899
Q ss_pred EEEEchhHHHHHHHHhh--------------Cc----cccccEEEecccCC
Q 024228 116 LVGVSYGGMVGFKMAEM--------------YP----DLVESMVVTCSVMG 148 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~--------------~p----~~v~~~i~~~~~~~ 148 (270)
|.|+|.|+.++..++.. .| ++|.++++++-+..
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred EEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCcc
Confidence 99999999999887641 12 46888888875543
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0029 Score=46.90 Aligned_cols=31 Identities=19% Similarity=0.070 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+..+++.....++++.|||+||.+|..++..
T Consensus 114 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 114 VKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3344444455689999999999999888765
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0026 Score=45.36 Aligned_cols=102 Identities=14% Similarity=0.005 Sum_probs=56.0
Q ss_pred eEEEeCCCCCccc-ccHHHHHHHhhcc---ceEEeecCCCCC-CCCCCCCCC--ChHHHHHHHHHHHHH----hCCCceE
Q 024228 47 AVVLLHPFGFDGI-LTWQFQVLALAKT---YEVYVPDFLFFG-SSVTDRPDR--TASFQAECMAKGLRK----LGVEKCT 115 (270)
Q Consensus 47 ~vv~~hG~~~~~~-~~~~~~~~~l~~~---~~v~~~d~~g~G-~s~~~~~~~--~~~~~~~~~~~~l~~----~~~~~~~ 115 (270)
.||+..|.+.... .....+...|.+. -.+..++||-.. .+......+ +..+-++++...++. -...+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 4556666554321 0222444455443 367788888642 211101111 222234444444443 3457899
Q ss_pred EEEEchhHHHHHHHHhh--------------Cc----cccccEEEecccCC
Q 024228 116 LVGVSYGGMVGFKMAEM--------------YP----DLVESMVVTCSVMG 148 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~--------------~p----~~v~~~i~~~~~~~ 148 (270)
|.|+|.|+.++..++.. .| ++|.++++++-+..
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 86 LVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred EEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCCc
Confidence 99999999999887641 22 46888888875543
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0031 Score=47.34 Aligned_cols=47 Identities=15% Similarity=0.087 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC----ccccccEEEecccC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY----PDLVESMVVTCSVM 147 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~i~~~~~~ 147 (270)
.+..+++.....++.+.|||+||.+|..+|... |.....++..+++.
T Consensus 127 ~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~Pr 177 (279)
T 3uue_A 127 AVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPR 177 (279)
T ss_dssp HHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCC
T ss_pred HHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 344444445567899999999999999887653 33344455555443
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0016 Score=48.48 Aligned_cols=39 Identities=18% Similarity=0.082 Sum_probs=26.8
Q ss_pred HHhCCCceEEEEEchhHHHHHHHHhhCc---cccccEEEeccc
Q 024228 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSV 146 (270)
Q Consensus 107 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~ 146 (270)
+.....++++.|||+||.+|..++.... .++. ++..+++
T Consensus 120 ~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 120 SQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 3334568999999999999998887632 2455 4444443
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.011 Score=41.67 Aligned_cols=74 Identities=18% Similarity=-0.036 Sum_probs=46.7
Q ss_pred ceEEee--cCCCCCCCCCCCCCCChHHHHHHHHH----HHHHhCCCceEEEEEchhHHHHHHHHhhCc----cccccEEE
Q 024228 73 YEVYVP--DFLFFGSSVTDRPDRTASFQAECMAK----GLRKLGVEKCTLVGVSYGGMVGFKMAEMYP----DLVESMVV 142 (270)
Q Consensus 73 ~~v~~~--d~~g~G~s~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~i~ 142 (270)
..+..+ +||-.-..... ...+...-+.++.. ....-...+++|.|+|.|+.++-.++...| ++|.++++
T Consensus 61 v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvl 139 (201)
T 3dcn_A 61 VWVQGVGGPYLADLASNFL-PDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVL 139 (201)
T ss_dssp EEEEECCTTCCCCSGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEE
T ss_pred eEEEEeCCCccccCCcccc-cCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEE
Confidence 678888 68743211100 11233333444444 444445679999999999999988776655 57889998
Q ss_pred ecccC
Q 024228 143 TCSVM 147 (270)
Q Consensus 143 ~~~~~ 147 (270)
++-+.
T Consensus 140 fGdP~ 144 (201)
T 3dcn_A 140 FGYTK 144 (201)
T ss_dssp ETCTT
T ss_pred eeCcc
Confidence 87543
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0034 Score=47.69 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.+..+++.....++.+.|||+||.+|..+|...
T Consensus 143 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 143 KLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 344444444556899999999999999888754
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0027 Score=48.53 Aligned_cols=23 Identities=30% Similarity=0.212 Sum_probs=19.6
Q ss_pred CCCceEEEEEchhHHHHHHHHhh
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
...++++.|||+||.+|..+|..
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHH
Confidence 44589999999999999887765
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.02 Score=39.90 Aligned_cols=82 Identities=15% Similarity=-0.042 Sum_probs=49.4
Q ss_pred HHHHhhccceEEeec--CCCCCCCCCCCCCCChHHHHHHHHHH----HHHhCCCceEEEEEchhHHHHHHHHhhCc----
Q 024228 65 QVLALAKTYEVYVPD--FLFFGSSVTDRPDRTASFQAECMAKG----LRKLGVEKCTLVGVSYGGMVGFKMAEMYP---- 134 (270)
Q Consensus 65 ~~~~l~~~~~v~~~d--~~g~G~s~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---- 134 (270)
+...+.....+..++ ||-.-..... ...+...-.+++..+ ...-...+++|+|+|.|+.++-.++...|
T Consensus 41 L~~~~~~~v~v~~V~~~YpA~~~~~~~-~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~ 119 (187)
T 3qpd_A 41 LKLARSGDVACQGVGPRYTADLPSNAL-PEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQ 119 (187)
T ss_dssp HHHHSTTCEEEEECCSSCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHH
T ss_pred HHHHcCCCceEEeeCCcccCcCccccc-cccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhh
Confidence 344443336788888 8743211000 011222223444433 34445679999999999999988876655
Q ss_pred cccccEEEecccC
Q 024228 135 DLVESMVVTCSVM 147 (270)
Q Consensus 135 ~~v~~~i~~~~~~ 147 (270)
++|.++++++-+.
T Consensus 120 ~~V~avvlfGdP~ 132 (187)
T 3qpd_A 120 DKIKGVVLFGYTR 132 (187)
T ss_dssp HHEEEEEEESCTT
T ss_pred hhEEEEEEeeCCc
Confidence 4788999887543
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.02 Score=40.63 Aligned_cols=94 Identities=10% Similarity=-0.030 Sum_probs=56.9
Q ss_pred ceEEEeCCCCCccc--ccHHHHHHH-hhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEE
Q 024228 46 HAVVLLHPFGFDGI--LTWQFQVLA-LAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTL 116 (270)
Q Consensus 46 ~~vv~~hG~~~~~~--~~~~~~~~~-l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l 116 (270)
-.||+..|.+.... .....++.. |.+. -....++||-.-. .. + ..-+.++...|+.. ...+++|
T Consensus 9 v~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~~-----y~-S-~~G~~~~~~~i~~~~~~CP~tkivl 81 (205)
T 2czq_A 9 YVLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADFS-----QN-S-AAGTADIIRRINSGLAANPNVCYIL 81 (205)
T ss_dssp EEEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCTT-----CC-C-HHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccCC-----Cc-C-HHHHHHHHHHHHHHHhhCCCCcEEE
Confidence 34556666544332 123455555 5544 2447777774211 11 3 44455555555543 4568999
Q ss_pred EEEchhHHHHHHHHhhC--c----cccccEEEeccc
Q 024228 117 VGVSYGGMVGFKMAEMY--P----DLVESMVVTCSV 146 (270)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~--p----~~v~~~i~~~~~ 146 (270)
+|+|.|+.++-.++... + ++|.++++++-+
T Consensus 82 ~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 82 QGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp EEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred EeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 99999999988876554 3 478999998844
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.023 Score=42.94 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=45.8
Q ss_pred ceEEeecCCCCCCCCCC-CCC----CChHHHHHHHHHHHHH----hCCCceEEEEEchhHHHHHHHHhh--------Ccc
Q 024228 73 YEVYVPDFLFFGSSVTD-RPD----RTASFQAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEM--------YPD 135 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~-~~~----~~~~~~~~~~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~--------~p~ 135 (270)
..++.++|+-.-..... ... .+..+=+.++...++. -...+++|+|+|.|+.++-.++.. .++
T Consensus 85 v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~ 164 (302)
T 3aja_A 85 LQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDED 164 (302)
T ss_dssp EEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGG
T ss_pred ceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChH
Confidence 66788898855321100 001 1222223444444433 345699999999999998887643 346
Q ss_pred ccccEEEecccC
Q 024228 136 LVESMVVTCSVM 147 (270)
Q Consensus 136 ~v~~~i~~~~~~ 147 (270)
+|.++++++-+.
T Consensus 165 ~V~aVvLfGdP~ 176 (302)
T 3aja_A 165 LVLGVTLIADGR 176 (302)
T ss_dssp GEEEEEEESCTT
T ss_pred HEEEEEEEeCCC
Confidence 899999987554
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.036 Score=42.91 Aligned_cols=22 Identities=27% Similarity=0.302 Sum_probs=19.0
Q ss_pred CCceEEEEEchhHHHHHHHHhh
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
..++++.|||+||.+|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 3589999999999999888765
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=92.94 E-value=0.011 Score=46.78 Aligned_cols=35 Identities=20% Similarity=0.107 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhC
Q 024228 99 AECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 99 ~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 213 l~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 213 LREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3444455554432 4799999999999999887654
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=87.67 E-value=0.63 Score=36.93 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.++++..++++-.++|||+|=+.|+.+|..
T Consensus 158 l~~ll~~~Gv~P~~v~GHS~GE~aAa~~AG~ 188 (401)
T 4amm_A 158 GIRWLDRLGARPVGALGHSLGELAALSWAGA 188 (401)
T ss_dssp HHHHHHHHTCCCSEEEECTTHHHHHHHHTTS
T ss_pred HHHHHHHcCCCCCEEEECCHHHHHHHHHhCC
Confidence 4566778899999999999999888876543
|
| >3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=80.24 E-value=1.4 Score=33.54 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
+.++++..+.++-.++|||+|=+.|+.+|.
T Consensus 72 l~~~l~~~Gi~P~~v~GHSlGE~aAa~~aG 101 (307)
T 3im8_A 72 IYRLLQEKGYQPDMVAGLSLGEYSALVASG 101 (307)
T ss_dssp HHHHHHHTTCCCSEEEESTTHHHHHHHHTT
T ss_pred HHHHHHHcCCCceEEEccCHHHHHHHHHcC
Confidence 445667788999999999999988876654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 270 | ||||
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 2e-14 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 1e-13 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 2e-13 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 4e-13 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 1e-12 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 5e-12 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 8e-12 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 4e-11 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 1e-10 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 2e-10 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 2e-10 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 3e-10 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 2e-09 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 8e-09 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 9e-09 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 2e-08 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 2e-08 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 2e-08 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 3e-08 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 2e-04 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 4e-08 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 4e-08 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 5e-08 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 6e-08 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 7e-08 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 1e-07 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 3e-07 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 3e-07 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 4e-07 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 2e-06 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 0.003 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 2e-06 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 5e-06 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 0.001 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 8e-06 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 9e-06 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 1e-05 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 2e-04 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 3e-04 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 5e-04 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 5e-04 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 6e-04 | |
| d1ju3a2 | 347 | c.69.1.21 (A:5-351) Bacterial cocaine esterase N-t | 0.001 |
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 69.1 bits (167), Expect = 2e-14
Identities = 42/245 (17%), Positives = 89/245 (36%), Gaps = 33/245 (13%)
Query: 47 AVVLLHPFGFDG--ILTWQFQVLALAKTYEVYVPDFLFFG-SSVTDRPDRTASFQAECMA 103
V+L+H G W+ + AL+K Y V PD + FG + + + + + +
Sbjct: 25 PVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHII 84
Query: 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS------------------ 145
+ L +EK +VG ++GG + A Y + V+ MV+ +
Sbjct: 85 GIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYT 144
Query: 146 -----------VMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPA 194
+ S+ L R+ YE+ + ++ ++ +
Sbjct: 145 PSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSD 204
Query: 195 FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254
K + + ++ G D++ + + L E + A + + GH +E+ +NR
Sbjct: 205 EDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRL 263
Query: 255 LKTIL 259
+
Sbjct: 264 VVEFF 268
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 67.6 bits (164), Expect = 1e-13
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 8/110 (7%)
Query: 42 TTKKHAVVLLHPFG-----FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95
++ V+L+H + + W L +VYV + F S D P+
Sbjct: 5 AATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSD--DGPNGRG 62
Query: 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145
+ + L G K L+G S GG+ +A + P LV S+ +
Sbjct: 63 EQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 66.4 bits (160), Expect = 2e-13
Identities = 36/262 (13%), Positives = 69/262 (26%), Gaps = 48/262 (18%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
V+ LH W+ + +A ++ PD + G S D + +
Sbjct: 31 PVLFLHGNPTSS-YLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFI 89
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166
LG+E+ LV +G +GF A+ P+ V+ + + + R ++++
Sbjct: 90 EALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAF 149
Query: 167 VDFLLPKTADALKVQFDIA----------------------------------------- 185
+ + + F
Sbjct: 150 RTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIA 209
Query: 186 -----CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240
L L WG + A L E + N I
Sbjct: 210 GEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL-PNCKTVDIGPGL 268
Query: 241 HLVNLERPFVYNRQLKTILASL 262
H + + P + ++ L L
Sbjct: 269 HYLQEDNPDLIGSEIARWLPGL 290
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 65.6 bits (159), Expect = 4e-13
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 42 TTKKHAVVLLHPFG----FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTAS 96
T K+ +VL H G+ W AL + +VYV + +S +
Sbjct: 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTS-----EVRGE 58
Query: 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV 141
+ + + + G K L+G S+GG +A + PDL+ S
Sbjct: 59 QLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASAT 103
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 64.1 bits (154), Expect = 1e-12
Identities = 40/244 (16%), Positives = 88/244 (36%), Gaps = 31/244 (12%)
Query: 47 AVVLLHPFGFDG--ILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104
V+L+H G W+ + LA+ Y V D L FG + + T + +
Sbjct: 24 PVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHD 83
Query: 105 GLRKL-GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS------------------ 145
++ + K ++VG S GG G ++ ++ +LV ++V+ S
Sbjct: 84 FIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYD 143
Query: 146 -----VMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200
++ L ++++N + + K + F
Sbjct: 144 FTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEF 203
Query: 201 LEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256
+ K+ ++ G++DK+ ++ A + + ++ I GH +E P +
Sbjct: 204 IRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATL 262
Query: 257 TILA 260
+ L+
Sbjct: 263 SFLS 266
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (150), Expect = 5e-12
Identities = 30/269 (11%), Positives = 65/269 (24%), Gaps = 57/269 (21%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAEC 101
V+++H D +++ + + +T V V D S+ E
Sbjct: 2 YKPVIVVHGLF-DSSYSFRHLLEYINETHPGTVVTVLDLFDGRESL-RPLWEQVQGFREA 59
Query: 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM------------GL 149
+ + K + L+ S GG+V + + D ++ S L
Sbjct: 60 VVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWL 118
Query: 150 TESVSNAALERIGYESWVDFLLPK---------------------------TADALKVQF 182
+ + L RI Y W +A +
Sbjct: 119 FPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRK 178
Query: 183 DIACYKLPTLPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQ--------N 230
+ L ++ + N+ + +M+
Sbjct: 179 NFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGA 238
Query: 231 ATMESIEKAGHLVNLERPFVYNRQLKTIL 259
+ H +Y ++ L
Sbjct: 239 IVRCPMAGISHTAWHSNRTLYETCIEPWL 267
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 61.8 bits (148), Expect = 8e-12
Identities = 42/261 (16%), Positives = 83/261 (31%), Gaps = 40/261 (15%)
Query: 35 NIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRT 94
NIW K +VLLH +G + W+ L+ + +++ D FG S
Sbjct: 1 NIWWQTKGQGNVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSL 59
Query: 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154
A + + K +G S GG+V ++A +P+ V ++V S +
Sbjct: 60 ADMAEAVLQQAPD-----KAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDE 114
Query: 155 NAALERIGYESWVDFLLPKTADALK-----------------------------VQFDIA 185
++ + L ++ + D+
Sbjct: 115 WPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVL 174
Query: 186 CYKLPTLPAFVYKHILEKIHL----LWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 241
L L + L+ + + L+G D + +V L + ++ KA H
Sbjct: 175 NGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAH 233
Query: 242 LVNLERPFVYNRQLKTILASL 262
+ P + L + +
Sbjct: 234 APFISHPAEFCHLLVALKQRV 254
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 59.5 bits (142), Expect = 4e-11
Identities = 38/271 (14%), Positives = 74/271 (27%), Gaps = 47/271 (17%)
Query: 32 TILN--IWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVT 88
++L+ + K T + VVL+H G WQ + LA+T D G++
Sbjct: 1 SLLSNQLHFAKPTARTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPGHGTNPE 59
Query: 89 DRP-DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147
+ + + LVG S GG + ++
Sbjct: 60 RHCDNFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEG 119
Query: 148 GL-------------------------------TESVSNAALERIGYESWVDFLLPKTAD 176
G A+ L+ + +
Sbjct: 120 GHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSA 179
Query: 177 ALKVQFDIACYKLPTLPAFVYKHILEKI----HLLWGENDKIFDMQVARNLKEQVGQNAT 232
L L+ + H + GE D F +
Sbjct: 180 NLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQLAES-------SGLS 232
Query: 233 MESIEKAGHLVNLERPFVYNRQLKTILASLV 263
+ +AGH V+ E+P + + ++ ++ S++
Sbjct: 233 YSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 58.0 bits (138), Expect = 1e-10
Identities = 34/252 (13%), Positives = 73/252 (28%), Gaps = 40/252 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
+V H + + +W+ Q++ LA + Y V D G S A+ +A+
Sbjct: 21 PIVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQL 79
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES 165
+ L + L G S GG + + + S + + A + E
Sbjct: 80 IEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEV 139
Query: 166 WVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKI--------------------- 204
+ AD ++ D+A K +
Sbjct: 140 FDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKA 199
Query: 205 -----------------HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247
++ G+ D++ ++ + + + +T++ A H +
Sbjct: 200 FSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTH 259
Query: 248 PFVYNRQLKTIL 259
N L +
Sbjct: 260 KDQLNADLLAFI 271
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 58.0 bits (139), Expect = 2e-10
Identities = 28/258 (10%), Positives = 81/258 (31%), Gaps = 21/258 (8%)
Query: 23 QRTIEIEPGTILNIW--VPKKTT--KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVP 78
+ + G L++W PK+ K + +++ F + V+
Sbjct: 6 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRY 65
Query: 79 DFL-FFGSSVTDRPDRTASFQAECM---AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134
D L G S + T + + L+ G + L+ S V +++
Sbjct: 66 DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVIS--D 123
Query: 135 DLVESMVVTCSVMGLTESVSNAA--------LERIGYESWVDFLLPKTADALKVQFDIAC 186
+ ++ V+ L +++ A ++ + + + + ++ F+
Sbjct: 124 LELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEH-H 182
Query: 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQV-GQNATMESIEKAGHLVNL 245
+ + + ND + ++ + + + S+ + H +
Sbjct: 183 WDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG- 241
Query: 246 ERPFVYNRQLKTILASLV 263
E V +++ + +
Sbjct: 242 ENLVVLRNFYQSVTKAAI 259
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 57.2 bits (136), Expect = 2e-10
Identities = 36/231 (15%), Positives = 77/231 (33%), Gaps = 14/231 (6%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103
+ AV+LLH F + L Y + P + G + + +
Sbjct: 11 ERAVLLLHGFT-GNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVM 69
Query: 104 ---KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160
+ L+ G EK + G+S GG+ K+ P + + E++ LE
Sbjct: 70 NGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEY 129
Query: 161 I-------GYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDK 213
G + ++ A +L I ++ +D+
Sbjct: 130 AREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDE 189
Query: 214 IFDMQVARNLKEQV-GQNATMESIEKAGHLVNLER-PFVYNRQLKTILASL 262
+ + A + ++ ++ E++GH++ L++ + + L SL
Sbjct: 190 MINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 57.2 bits (136), Expect = 3e-10
Identities = 39/255 (15%), Positives = 70/255 (27%), Gaps = 41/255 (16%)
Query: 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFG-SSVTDRPDRTASFQAECM 102
H VL+H W L ++V D G + +E +
Sbjct: 3 AH-FVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPL 60
Query: 103 AKGL-RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161
L EK LVG S GG+ A+ Y + + + V SV+ TE + ++++
Sbjct: 61 LTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKL 120
Query: 162 ----------GYESWVDFLLPKTADALKVQF-------------------------DIAC 186
Y ++ T L
Sbjct: 121 MEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQN 180
Query: 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246
+ K +W + D+IF + E + +E H + L
Sbjct: 181 ILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK-PDKVYKVEGGDHKLQLT 239
Query: 247 RPFVYNRQLKTILAS 261
+ L+ + +
Sbjct: 240 KTKEIAEILQEVADT 254
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 54.9 bits (130), Expect = 2e-09
Identities = 49/277 (17%), Positives = 77/277 (27%), Gaps = 43/277 (15%)
Query: 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLAL-AKTYEVYVPDFLFF 83
T+ E T + ++ + VVL+H + DG +W+ Q L A+ Y V D F
Sbjct: 4 TVGNENSTPIELYY-EDQGSGQPVVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRGF 61
Query: 84 GSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVT 143
G S A + L L + LVG S G + Y + +
Sbjct: 62 GGSSKVNTGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAF 121
Query: 144 CSVMGLTESVSNAALERIGYE---------------------SWVDFLLPKTADALKVQF 182
+ + + E + E L + Q
Sbjct: 122 LASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQA 181
Query: 183 DIACYKLPTLPAFVYKHILEKIH-------------------LLWGENDKIFDMQVARNL 223
+ + A V + + +L G D I +
Sbjct: 182 VTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARR 241
Query: 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260
Q A +E A H + N LKT LA
Sbjct: 242 FHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLA 278
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 53.0 bits (125), Expect = 8e-09
Identities = 44/254 (17%), Positives = 70/254 (27%), Gaps = 42/254 (16%)
Query: 48 VVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSS--VTDRPDRTASFQAECMAK 104
VL+H G +W L ++V D G+ + + M
Sbjct: 5 FVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMEL 63
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164
EK LVG S GGM E YP + + V + M + S+ LE+
Sbjct: 64 MESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNER 123
Query: 165 SWVDF------------------------LLPKTADALKVQFDIACYKLPTLPAFVY--- 197
+ + L L D+A P+ ++
Sbjct: 124 TPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMED 183
Query: 198 ----------KHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247
+ K + DK + R + +G I+ A H+ L
Sbjct: 184 LSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG-VTEAIEIKGADHMAMLCE 242
Query: 248 PFVYNRQLKTILAS 261
P L I
Sbjct: 243 PQKLCASLLEIAHK 256
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 52.6 bits (124), Expect = 9e-09
Identities = 43/250 (17%), Positives = 77/250 (30%), Gaps = 38/250 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
V+ H + D W++Q+ L+ + Y D FG S A+ +A+
Sbjct: 21 PVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQL 79
Query: 106 LRKLGVEKCTLV-GVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--------- 155
+ L +++ TLV GG V +A V +V+ +V L +
Sbjct: 80 IEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDV 139
Query: 156 -----AALERIGYESWVDFLLPKTADA---------------------LKVQFDIACYKL 189
L + + DF P LK D
Sbjct: 140 FARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFA 199
Query: 190 PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 249
T I ++ G+ D+I + + ++ + A ++ + A H +
Sbjct: 200 ETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQ 259
Query: 250 VYNRQLKTIL 259
N L L
Sbjct: 260 QLNEDLLAFL 269
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 52.2 bits (123), Expect = 2e-08
Identities = 42/255 (16%), Positives = 83/255 (32%), Gaps = 41/255 (16%)
Query: 47 AVVLLHPFGFDG--ILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRT-----ASFQA 99
AVVLLH G W+ + LA+ + V PD + FG S +
Sbjct: 28 AVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRV 87
Query: 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159
E + + G+EK +VG S GG V ++ P+ + + + SV +
Sbjct: 88 EQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELAR 147
Query: 160 RIGYESW---------------------------------VDFLLPKTADALKVQFDIAC 186
+ + + + + + + A
Sbjct: 148 LLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAG 207
Query: 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246
+ +P + + + G D+I + + L + + ++A + +++ GH LE
Sbjct: 208 MESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLE 266
Query: 247 RPFVYNRQLKTILAS 261
R L +
Sbjct: 267 RWDAMGPMLMEHFRA 281
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 52.0 bits (124), Expect = 2e-08
Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 7/116 (6%)
Query: 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLAL--AKTYEVYVPDFLFFGSSVTDRP 91
L ++ ++L+ G G ++ + L Y F + D
Sbjct: 20 LTCQGASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN--DTQ 77
Query: 92 DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESM--VVTCS 145
T + G K ++ S GG+V +P + + ++ +
Sbjct: 78 VNTEYM-VNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFA 132
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 51.8 bits (122), Expect = 2e-08
Identities = 34/253 (13%), Positives = 70/253 (27%), Gaps = 43/253 (16%)
Query: 37 WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLA--------LAKTYEVYVPDFLFFGSSVT 88
+P++ K++ + L+H G+ TW+ L K Y YV D G S T
Sbjct: 51 QIPQRA-KRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSAT 108
Query: 89 DRPDRTASFQAECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146
D A + A L L + +G + + + +
Sbjct: 109 DISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQM 168
Query: 147 MGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK--- 203
+ + S + L T Q I ++ + I+
Sbjct: 169 VPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPG 228
Query: 204 ---------------IHLLWGENDKIFDMQVAR--------NLKEQVGQNATM-----ES 235
+ +++G++ + F R + G +
Sbjct: 229 ECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALG 288
Query: 236 IEKAGHLVNLERP 248
+ H++ +R
Sbjct: 289 VHGNSHMMMQDRN 301
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 51.6 bits (122), Expect = 3e-08
Identities = 31/258 (12%), Positives = 66/258 (25%), Gaps = 30/258 (11%)
Query: 25 TIEIEPGTILNIW-------VPKKTTKKHAVVLLHPFG-----FDGILTWQFQVLALAKT 72
+ E G IL I + ++ L H + L LA
Sbjct: 31 EVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADA 90
Query: 73 -YEVYVPDFLFFGS--------------SVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117
Y+V++ + + + L+K G +K V
Sbjct: 91 GYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYV 150
Query: 118 GVSYGGMVGFKMAEMYPDLVESMVVTCS---VMGLTESVSNAALERIGYESWVDFLLPKT 174
G S G +GF P L + + + V + + + + +
Sbjct: 151 GHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNK 210
Query: 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME 234
FD V + ++ G + +M +++
Sbjct: 211 IFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQ 270
Query: 235 SIEKAGHLVNLERPFVYN 252
++ V + ++
Sbjct: 271 NVLHWSQAVKSGKFQAFD 288
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 40.1 bits (92), Expect = 2e-04
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235
D ++ Y P + + I + G ND + D L ++
Sbjct: 288 DWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRK 347
Query: 236 IEKAGHL 242
I HL
Sbjct: 348 IPPYNHL 354
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 51.1 bits (120), Expect = 4e-08
Identities = 41/253 (16%), Positives = 71/253 (28%), Gaps = 40/253 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
VVL+H F G +W+ Q AL Y V D FG S A +
Sbjct: 25 PVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTV 83
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES 165
L L ++ LVG S G + Y + V + + ++ + +
Sbjct: 84 LETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQE 143
Query: 166 WVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI------------------------- 200
+ D ++ + L + I
Sbjct: 144 FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPT 203
Query: 201 ---------LEKIHL----LWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247
+ +I + L G D+ ++ + + +A +E A H +
Sbjct: 204 TWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTH 263
Query: 248 PFVYNRQLKTILA 260
N L LA
Sbjct: 264 AEEVNTALLAFLA 276
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 48.6 bits (115), Expect = 4e-08
Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 9/96 (9%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
V+L+ Y Y+ D +G + + P A +A
Sbjct: 23 PVLLVAEEASRWPEALPEG-------YAFYLLDLPGYGRT--EGPRMAPEELAHFVAGFA 73
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142
+ + ++ G +G + + + + V
Sbjct: 74 VMMNLGAPWVLLRGLGLALGPHLEALGLRALPAEGV 109
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 50.6 bits (119), Expect = 5e-08
Identities = 39/250 (15%), Positives = 76/250 (30%), Gaps = 38/250 (15%)
Query: 47 AVVLLHPFGFD-GILTWQFQVLA--LAKTYEVYVPDFL-FFGSSVTDRPDRTASFQAECM 102
V++LH G G + ++ + + Y V + D F S ++ A +
Sbjct: 32 TVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 91
Query: 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI- 161
+ L +++ LVG + GG A YPD + +++ + +E I
Sbjct: 92 KGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIK 151
Query: 162 ----------------------------GYESWVDFLLPKTADALKVQFDIACYKLPTLP 193
E ++ + + L
Sbjct: 152 LLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLS 211
Query: 194 AFVYKHILEKI----HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 249
+ L +I + WG +D+ + L + +A + K GH E
Sbjct: 212 TWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGHWAQWEHAD 270
Query: 250 VYNRQLKTIL 259
+NR + L
Sbjct: 271 EFNRLVIDFL 280
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 50.6 bits (119), Expect = 6e-08
Identities = 35/275 (12%), Positives = 72/275 (26%), Gaps = 57/275 (20%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD-----RTASFQAEC 101
++ H W+ + A + D + G S P A +
Sbjct: 30 PILFQHGNPTSS-YLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYL 88
Query: 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161
A ++ LV +G +GF A + + V+ + ++ E +R
Sbjct: 89 DALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRD 148
Query: 162 GYESW---------------VDFLLPKTADALKVQFDIACYKLPTLPA------------ 194
++++ V+ +LP + ++A Y+ P L A
Sbjct: 149 LFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPR 208
Query: 195 -------------------FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235
+ E + R+ N T
Sbjct: 209 QIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTW-PNQTEI- 265
Query: 236 IEKAGHLVNLERPFVYNRQLKTILASLVHANGQHN 270
H + + P + + L A+ H+
Sbjct: 266 TVAGAHFIQEDSPDEIGAAIAAFVRRLRPAH--HH 298
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (117), Expect = 7e-08
Identities = 38/252 (15%), Positives = 72/252 (28%), Gaps = 55/252 (21%)
Query: 19 VGMTQRTIEIEPGTI-LNIWVPKKTTKKHAVVLLHPFGFDGILTWQF--QVLALAKT-YE 74
V + TI+++ + +P + +V+LLH F TWQ + LA+ Y
Sbjct: 4 VEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSS-ETWQNLGTLHRLAQAGYR 62
Query: 75 VYVPDFLFFGSSVTDRPDRTAS--FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132
D G S +A + L + ++ S GM
Sbjct: 63 AVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTA 122
Query: 133 YPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL 192
+ V + +
Sbjct: 123 PGSQLPGFVPVAPIC-----------------------------------------TDKI 141
Query: 193 PAFVYKHILEKIHLLWGENDKIF--DMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 250
A Y + +++G+ D + + + L N + ++ AGH L++P
Sbjct: 142 NAANYASVKTPALIVYGDQDPMGQTSFEHLKQLP-----NHRVLIMKGAGHPCYLDKPEE 196
Query: 251 YNRQLKTILASL 262
++ L L L
Sbjct: 197 WHTGLLDFLQGL 208
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 49.2 bits (115), Expect = 1e-07
Identities = 39/254 (15%), Positives = 65/254 (25%), Gaps = 40/254 (15%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALA-KTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
VV H + W Q+L Y V D G S A +A
Sbjct: 23 PVVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAAL 81
Query: 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA--------- 156
L + +G S GG + + V S + S+
Sbjct: 82 TEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEV 141
Query: 157 -------------------------ALERIGYESWVDFLLPKTADALKVQFDIACYKLPT 191
R G + + + +
Sbjct: 142 FDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAA 201
Query: 192 LPAFVYKHILEKIH----LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247
+ L++I + G +D++ A ++ NAT++S E H +
Sbjct: 202 FSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTH 261
Query: 248 PFVYNRQLKTILAS 261
P V N L + S
Sbjct: 262 PEVLNPDLLAFVKS 275
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 48.4 bits (113), Expect = 3e-07
Identities = 39/253 (15%), Positives = 75/253 (29%), Gaps = 41/253 (16%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105
VV +H + +G WQ Q+ A+ Y D G S A+ +
Sbjct: 21 PVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDL 79
Query: 106 LRKLGVEKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-------- 156
L L + TLV S GG + + + S V+ ++ +
Sbjct: 80 LTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEV 139
Query: 157 ------------------------ALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL 192
+ R G + A+ + +
Sbjct: 140 FDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAF 199
Query: 193 PAFVYKHILEK----IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL--E 246
+ L+K ++ G++D++ + Q+ NA ++ E + H + +
Sbjct: 200 GYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPG 259
Query: 247 RPFVYNRQLKTIL 259
+NR L L
Sbjct: 260 DKEKFNRDLLEFL 272
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (113), Expect = 3e-07
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 198 KHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKT 257
+ IL ++ E D + Q+++++++ + + IE GH +++P N+ L
Sbjct: 256 RKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPTEVNQILIK 314
Query: 258 ILAS 261
L S
Sbjct: 315 WLDS 318
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 48.3 bits (113), Expect = 4e-07
Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 6/148 (4%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAEC--MAK 104
VV+LH G + + Y + + D G S + + +
Sbjct: 36 PVVMLHGGPGGG-CNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIER 94
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL---TESVSNAALERI 161
LGV++ + G S+G + A+ +P V +V+ + E R+
Sbjct: 95 LRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRL 154
Query: 162 GYESWVDFLLPKTADALKVQFDIACYKL 189
++W +L +L
Sbjct: 155 FPDAWEHYLNAIPPVERADLMSAFHRRL 182
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 45.7 bits (106), Expect = 2e-06
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 197 YKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256
+ + ++WG D + N TME+IE GH + +E+P + ++K
Sbjct: 230 HTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK 289
Query: 257 T 257
T
Sbjct: 290 T 290
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 36.4 bits (82), Expect = 0.003
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103
++LLH + W + LA+ Y+V VPD FG S + + + + A
Sbjct: 30 TLLLLHGWPGFW-WEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAA 85
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 45.7 bits (106), Expect = 2e-06
Identities = 30/262 (11%), Positives = 61/262 (23%), Gaps = 13/262 (4%)
Query: 10 LLLHGLLKLVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLAL 69
L LHG + ++ I + + + P + + + F + +
Sbjct: 51 LCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALI 110
Query: 70 AKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV----------EKCTLVGV 119
+ + + T K L + V
Sbjct: 111 ---ERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQ 167
Query: 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALK 179
G +K + P + +A ++ + K +
Sbjct: 168 PADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVA 227
Query: 180 VQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 239
+ +F + + G DK+ V +K + I A
Sbjct: 228 QRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADA 287
Query: 240 GHLVNLERPFVYNRQLKTILAS 261
GH V V LK +
Sbjct: 288 GHFVQEFGEQVAREALKHFAET 309
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 44.5 bits (103), Expect = 5e-06
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF--QAECMAK 104
V +H G ++ + L + Y+V + D G S + + +
Sbjct: 36 PAVFIHGGPGGG-ISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIER 94
Query: 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147
GVE+ + G S+G + A+ +P+ V MV+
Sbjct: 95 LREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 137
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 37.2 bits (84), Expect = 0.001
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 204 IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTI 258
++ G D +Q A +L + A + +E AGH + P + ++ +
Sbjct: 257 AVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHS--YDEPGILHQLMIAT 308
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 44.2 bits (103), Expect = 8e-06
Identities = 35/226 (15%), Positives = 69/226 (30%), Gaps = 21/226 (9%)
Query: 36 IWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTA 95
+ +P+ AV++L ++Q + L L + D G +
Sbjct: 122 VRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGD 181
Query: 96 SFQ----AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV-TCSVMGLT 150
+ + L + + ++G S GG K A P L + S +
Sbjct: 182 YEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDYW 241
Query: 151 ESVSNAALERIGYESWVDFLLP---KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLL 207
+ + E Y S VD L AL+ + ++ PT +L
Sbjct: 242 DLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTY-------------IL 288
Query: 208 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253
G +D++ V L+ ++ + + H +
Sbjct: 289 HGVHDEVPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLE 334
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 43.8 bits (101), Expect = 9e-06
Identities = 41/279 (14%), Positives = 79/279 (28%), Gaps = 51/279 (18%)
Query: 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR 90
G + + K +K ++ +H + V D G S
Sbjct: 11 GIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD 70
Query: 91 PDRTASFQAECMAKG--LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148
+ A+ + G EK L+G SYGG + A Y D ++ ++V+ +
Sbjct: 71 QSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 130
Query: 149 LTESVSNAALERIGYESWV-----------DFLLPKTADALKVQFDIACYKLPTLPAFVY 197
+ +V + + P+ +A+ + + P V
Sbjct: 131 VPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVL 190
Query: 198 KHILE------------------------------------KIHLLWGENDKIFDMQVAR 221
K + + GE D++ VAR
Sbjct: 191 KSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVAR 249
Query: 222 NLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260
+ E++ + + HL E YN+ L +
Sbjct: 250 VIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDFIL 287
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 43.7 bits (101), Expect = 1e-05
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Query: 197 YKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256
+ + ++ E+D I ++L + A + I GH + +
Sbjct: 232 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVIL 290
Query: 257 TILAS 261
S
Sbjct: 291 AHTRS 295
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 39.7 bits (92), Expect = 2e-04
Identities = 16/141 (11%), Positives = 36/141 (25%), Gaps = 15/141 (10%)
Query: 106 LRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163
L V ++ G++ GG + ++ Y D+ + + + +
Sbjct: 3 LPAFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYN 62
Query: 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNL 223
+ + L ++ G +D V L
Sbjct: 63 GYPSITTPTANMKSWSGNQIASVANLGQRKIYM-------WT---GSSDTTVGPNVMNQL 112
Query: 224 KEQ---VGQNATMESIEKAGH 241
K Q +A + + G
Sbjct: 113 KAQLGNFDNSANVSYVTTTGA 133
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 39.3 bits (90), Expect = 3e-04
Identities = 19/159 (11%), Positives = 48/159 (30%), Gaps = 10/159 (6%)
Query: 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK-------TYEV 75
Q T EIE TI + + + LLH + + + + + + +
Sbjct: 84 QFTTEIEGLTIHFAALFSEREDAVPIALLHGW-PGSFVEFYPILQLFREEYTPETLPFHL 142
Query: 76 YVPDFLFFGSSVTDRPDRTASFQAEC--MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133
VP + S D+ + + ++ LG ++ G ++ +
Sbjct: 143 VVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVG 202
Query: 134 PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172
D +++ + M + + + +
Sbjct: 203 FDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEK 241
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 38.2 bits (88), Expect = 5e-04
Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 8/96 (8%)
Query: 47 AVVLLHPFGFDGILTWQFQVLA--LAKTYEVYVPDF--LFFGSSVTDRPDRTASFQAECM 102
V+ +F LA L V G + A+ QA+ +
Sbjct: 44 TVICCAGTAAISG-PHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAV 102
Query: 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVE 138
+R G + + G S G ++ + +A D
Sbjct: 103 ---IRTQGDKPFVVAGHSAGALMAYALATELLDRGH 135
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 38.6 bits (88), Expect = 5e-04
Identities = 22/243 (9%), Positives = 56/243 (23%), Gaps = 30/243 (12%)
Query: 25 TIEIEPGTILNIWVPK-KTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLF 82
T + + W H ++ + +++ A Y +
Sbjct: 60 TYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRG 119
Query: 83 FGSSVTDRPD---------------------RTASFQAECMAKGLRKLGV---EKCTLVG 118
S R A + + + + G
Sbjct: 120 QQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTG 179
Query: 119 VSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADAL 178
S GG + A + ++ + ++ A + + +
Sbjct: 180 GSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEV 239
Query: 179 KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK 238
+ ++ + + L V +L + G DK+ + ++
Sbjct: 240 QAMKTLSYFDIMNLADRVKVPVL----MSIGLIDKVTPPSTVFAAYNHLETKKELKVYRY 295
Query: 239 AGH 241
GH
Sbjct: 296 FGH 298
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 37.6 bits (86), Expect = 6e-04
Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 5/97 (5%)
Query: 48 VVLLHPFGFDGILTWQFQVLALAK-TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106
VV++H G + L + T + + K L
Sbjct: 5 VVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLY-AVDFWDKTGTNYNNGPVLSRFVQKVL 62
Query: 107 RKLGVEKCTLVGVSYGGMVGFKMAEMY--PDLVESMV 141
+ G +K +V S GG + + V ++V
Sbjct: 63 DETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 99
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Score = 37.5 bits (85), Expect = 0.001
Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 11/129 (8%)
Query: 31 GTIL--NIWVPKKTTKKHAVVLLHPFGFDGILTW-----QFQVLALAKTYEVYVPDFLFF 83
G L +++ P +++ +P+ + W + Y V + D
Sbjct: 15 GVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFV-RDGYAVVIQDTRGL 73
Query: 84 GSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV---SYGGMVGFKMAEMYPDLVESM 140
+S + VG+ SY G+ ++ A ++++
Sbjct: 74 FASEGEFVPHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAI 133
Query: 141 VVTCSVMGL 149
+ + L
Sbjct: 134 APSMASADL 142
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 270 | |||
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 100.0 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.98 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.98 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.97 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.97 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.96 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.95 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.95 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.95 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.95 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.94 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.93 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.92 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.91 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.9 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.9 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.89 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.89 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.89 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.89 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.89 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.89 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.88 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.87 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.87 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.87 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.87 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.87 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.86 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.86 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.82 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.81 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.79 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.79 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.77 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.77 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.75 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.72 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.72 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.7 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.68 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.68 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.64 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.63 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.6 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.57 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.49 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.48 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.48 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.44 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.43 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.38 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.37 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.32 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.31 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.25 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.25 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.22 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.19 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.16 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 99.13 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.13 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.64 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.21 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.16 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.1 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.06 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.05 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.97 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 97.92 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.9 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.81 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.62 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.83 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.82 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.8 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.74 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.7 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 96.07 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 95.9 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 95.85 |
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=8.1e-40 Score=249.33 Aligned_cols=239 Identities=15% Similarity=0.165 Sum_probs=179.8
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
.++.+++++ +|.+++|...++ +++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+....+.++++
T Consensus 6 p~~~~~i~~-~g~~i~y~~~G~-~~~p~lvllHG~~~~~~-~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~ 82 (291)
T d1bn7a_ 6 PFDPHYVEV-LGERMHYVDVGP-RDGTPVLFLHGNPTSSY-LWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHV 82 (291)
T ss_dssp CCCCEEEEE-TTEEEEEEEESC-SSSSCEEEECCTTCCGG-GGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHH
T ss_pred CCCCeEEEE-CCEEEEEEEeCC-CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHH
Confidence 356788888 799999999886 45789999999999999 999999999888999999999999999887889999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-----Hhhhhccch----------
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-----AALERIGYE---------- 164 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-----~~~~~~~~~---------- 164 (270)
+|+.+++++++.++++++||||||.+++.++.++|+++++++++++.......... .........
T Consensus 83 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
T d1bn7a_ 83 RYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQ 162 (291)
T ss_dssp HHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHTTS
T ss_pred HHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhhhhh
Confidence 99999999999999999999999999999999999999999998876543221110 000000000
Q ss_pred -h----h-hhhc-ccccHHHHHH-------------HHHhhh--hcCCCC---------hhhhhhhhheeeeEEEcCCCc
Q 024228 165 -S----W-VDFL-LPKTADALKV-------------QFDIAC--YKLPTL---------PAFVYKHILEKIHLLWGENDK 213 (270)
Q Consensus 165 -~----~-~~~~-~~~~~~~~~~-------------~~~~~~--~~~~~~---------~~~~~~~~~~P~l~i~g~~D~ 213 (270)
. . .... .......... ...... ...... ....+.++.+|+++++|++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 242 (291)
T d1bn7a_ 163 NAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGV 242 (291)
T ss_dssp CHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECS
T ss_pred hhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCC
Confidence 0 0 0000 0000000000 000000 000000 011233445999999999999
Q ss_pred cCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 214 IFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
++|++.++.+.+.++ ++++++++++||+++.|+|+++++.|.+||+++
T Consensus 243 ~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 243 LIPPAEAARLAESLP-NCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp SSCHHHHHHHHHHST-TEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred CcCHHHHHHHHHHCC-CCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 999999999999998 999999999999999999999999999999875
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=1.9e-38 Score=239.03 Aligned_cols=236 Identities=18% Similarity=0.230 Sum_probs=175.8
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCccc--ccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGI--LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQ 98 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~ 98 (270)
...+++++ ||.+++|...|+ +|+|||+||++++.. ..|..+++.|+++|+|+++|+||||.|+.+....+.+.+
T Consensus 2 ~~~~~~~~-dg~~l~y~~~G~---g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~ 77 (268)
T d1j1ia_ 2 YVERFVNA-GGVETRYLEAGK---GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRR 77 (268)
T ss_dssp CEEEEEEE-TTEEEEEEEECC---SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHH
T ss_pred CcCeEEEE-CCEEEEEEEEcC---CCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCccccccccc
Confidence 35677887 899999998886 688999999987655 246778889988899999999999999988888999999
Q ss_pred HHHHHHHHHHhCCC-ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH--hhhh-cc---chhhhhhc-
Q 024228 99 AECMAKGLRKLGVE-KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA--ALER-IG---YESWVDFL- 170 (270)
Q Consensus 99 ~~~~~~~l~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~--~~~~-~~---~~~~~~~~- 170 (270)
++++.+++++++.+ +++++|||+||.+++.+|.++|++|+++|++++........... .... .. ........
T Consensus 78 ~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (268)
T d1j1ia_ 78 IRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALT 157 (268)
T ss_dssp HHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHHHS
T ss_pred cccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhhhHHHHHHHh
Confidence 99999999999874 78999999999999999999999999999999865432111000 0000 00 00000000
Q ss_pred ---cccc----------------HHHHHHHHHhh-hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC
Q 024228 171 ---LPKT----------------ADALKVQFDIA-CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN 230 (270)
Q Consensus 171 ---~~~~----------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 230 (270)
.... ........... ...........+.++.+|+++++|++|.++|++.++.+.+.++ +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~ 236 (268)
T d1j1ia_ 158 NDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLID-D 236 (268)
T ss_dssp CTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT-T
T ss_pred hhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-C
Confidence 0000 00000001100 1111223344566677999999999999999999999999998 9
Q ss_pred ceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 231 ATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 231 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+++++++++||+++.|+|+++++.|.+||.+
T Consensus 237 ~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 237 SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999975
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=4.1e-38 Score=237.52 Aligned_cols=233 Identities=19% Similarity=0.292 Sum_probs=170.2
Q ss_pred EEEeecCCeEEEEEecCCCCCCceEEEeCCCCCccc--ccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGI--LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAE 100 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~ 100 (270)
++|.+ +|.+++|...|+ +|+|||+||++++.. ..|..+++.|++.|+|+++|+||||.|..+.. ..+.+.+++
T Consensus 6 ~~i~~-~G~~~~Y~~~G~---G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 81 (271)
T d1uk8a_ 6 KSILA-AGVLTNYHDVGE---GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVD 81 (271)
T ss_dssp EEEEE-TTEEEEEEEECC---SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHH
T ss_pred CEEEE-CCEEEEEEEEee---CCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccccch
Confidence 35655 899999999886 789999999987765 23556788888789999999999999987543 467889999
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--Hhhhhcc-c---hhhhhh-----
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERIG-Y---ESWVDF----- 169 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~~~~~~~-~---~~~~~~----- 169 (270)
++..++++++.++++|+||||||.+++.+|.++|++++++|++++.......... ....... . ......
T Consensus 82 ~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (271)
T d1uk8a_ 82 HIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDR 161 (271)
T ss_dssp HHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSCG
T ss_pred hhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999887543221110 0000000 0 000000
Q ss_pred -cccccHHH----------HHHHHHhhhhc-------CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCc
Q 024228 170 -LLPKTADA----------LKVQFDIACYK-------LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNA 231 (270)
Q Consensus 170 -~~~~~~~~----------~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 231 (270)
........ ....+...... ........+..+.+|+++++|++|.++|.+..+.+.+.++ ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~ 240 (271)
T d1uk8a_ 162 SLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELID-RA 240 (271)
T ss_dssp GGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT-TE
T ss_pred ccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCC-CC
Confidence 00000000 00000000000 0011123345556999999999999999999999999998 89
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++++++||+++.++|+++++.|.+||++
T Consensus 241 ~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 241 QLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp EEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999985
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=3.4e-38 Score=240.41 Aligned_cols=236 Identities=21% Similarity=0.267 Sum_probs=168.9
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC----CC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD----RT 94 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----~~ 94 (270)
..++..++++ +|.+++|...|. +|+|||+||+++++. .|..+++.|+++|+|+++|+||||.|...... .+
T Consensus 6 ~~~~~~~~~~-~~~~l~y~~~G~---gp~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~ 80 (293)
T d1ehya_ 6 EDFKHYEVQL-PDVKIHYVREGA---GPTLLLLHGWPGFWW-EWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYS 80 (293)
T ss_dssp GGSCEEEEEC-SSCEEEEEEEEC---SSEEEEECCSSCCGG-GGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGC
T ss_pred CCCcceEEEE-CCEEEEEEEECC---CCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEecCCcccCCcccccccccccc
Confidence 4567788888 688999998875 789999999999999 99999999988899999999999999865432 57
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH-------hhhhc-c----
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-------ALERI-G---- 162 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~-------~~~~~-~---- 162 (270)
.+++++|+.+++++++.++++++||||||.+|+.+|.++|+++.+++++++........... ..... .
T Consensus 81 ~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (293)
T d1ehya_ 81 LDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMA 160 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHH
T ss_pred chhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccchh
Confidence 78999999999999999999999999999999999999999999999999865321110000 00000 0
Q ss_pred --------------chhhhh-hc-ccc--cHHHHHHHH----------------Hhhh-hcCCCChhhhhhhhheeeeEE
Q 024228 163 --------------YESWVD-FL-LPK--TADALKVQF----------------DIAC-YKLPTLPAFVYKHILEKIHLL 207 (270)
Q Consensus 163 --------------~~~~~~-~~-~~~--~~~~~~~~~----------------~~~~-~~~~~~~~~~~~~~~~P~l~i 207 (270)
...... .. ... ......... .... ...............+|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii 240 (293)
T d1ehya_ 161 VEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMI 240 (293)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEE
T ss_pred hhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCCceEEE
Confidence 000000 00 000 000000000 0000 000111111122334899999
Q ss_pred EcCCCccCCHHHHHHHH-HHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 208 WGENDKIFDMQVARNLK-EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 208 ~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+|++|.++|.+...++. +..+ +.++++++++||++++|+|+++++.|.+||+
T Consensus 241 ~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 241 WGLGDTCVPYAPLIEFVPKYYS-NYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp EECCSSCCTTHHHHHHHHHHBS-SEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred EeCCCCCcCHHHHHHHHHHhCC-CCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 99999999987765544 4455 9999999999999999999999999999974
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=3.7e-38 Score=239.16 Aligned_cols=236 Identities=19% Similarity=0.275 Sum_probs=171.0
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCccc--ccHHHHHHHhhccceEEeecCCCCCCCCCCCCC-----CCh
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGI--LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD-----RTA 95 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~-----~~~ 95 (270)
+++++. ++.+++|...|+ +++|+|||+||++++.. ..|..+++.|+++|+|+++|+||||.|+..... .+.
T Consensus 6 ~~~~~~-~~~~~h~~~~G~-~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (281)
T d1c4xa_ 6 EKRFPS-GTLASHALVAGD-PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWV 83 (281)
T ss_dssp EEEECC-TTSCEEEEEESC-TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHH
T ss_pred EEEEcc-CCEEEEEEEEec-CCCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhH
Confidence 344444 568999999987 56899999999987654 257788999998899999999999999865532 245
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH---hhhhccc------hhh
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA---ALERIGY------ESW 166 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~---~~~~~~~------~~~ 166 (270)
+++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++........... ....... ...
T Consensus 84 ~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (281)
T d1c4xa_ 84 GMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYREL 163 (281)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHH
T ss_pred HHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccchhhhh
Confidence 6778899999999999999999999999999999999999999999999865432211111 1110000 000
Q ss_pred hhh-c-c----cccHHHHHH------------HHHh---hh---hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHH
Q 024228 167 VDF-L-L----PKTADALKV------------QFDI---AC---YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARN 222 (270)
Q Consensus 167 ~~~-~-~----~~~~~~~~~------------~~~~---~~---~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 222 (270)
... . . ......... .... .. ..........+.++.+|+|+++|++|.++|++..+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~ 243 (281)
T d1c4xa_ 164 IHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLY 243 (281)
T ss_dssp HHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHHH
T ss_pred hhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHHHH
Confidence 000 0 0 000000000 0000 00 001122334456666999999999999999999999
Q ss_pred HHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 223 LKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 223 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+.+.++ ++++++++++||++++|+|+++++.|.+||+.
T Consensus 244 ~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 244 LTKHLK-HAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp HHHHCS-SEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHCC-CCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 999998 99999999999999999999999999999973
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=9.2e-38 Score=238.69 Aligned_cols=235 Identities=16% Similarity=0.042 Sum_probs=172.9
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccH-HHHHHHhhcc-ceEEeecCCCCCCCCCCCC---CCChHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFLFFGSSVTDRP---DRTASF 97 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~---~~~~~~ 97 (270)
++.+.+ +|.+++|...|+ +++|+|||+||++++.. .| ..+.+.|.+. |+|+++|+||||.|+.... .++.++
T Consensus 2 e~~~~~-g~~~i~y~~~G~-~~~p~vvl~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 78 (297)
T d1q0ra_ 2 ERIVPS-GDVELWSDDFGD-PADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGE 78 (297)
T ss_dssp EEEEEE-TTEEEEEEEESC-TTSCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHH
T ss_pred CeEEEE-CCEEEEEEEecC-CCCCEEEEECCCCcChh-HHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccch
Confidence 456666 799999999986 45799999999999988 77 4567777766 9999999999999975442 368999
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh--hhc-c-----------c
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL--ERI-G-----------Y 163 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~--~~~-~-----------~ 163 (270)
+++|+..++++++.++++++||||||.+++.+|.++|++|+++|++++............. ... . .
T Consensus 79 ~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (297)
T d1q0ra_ 79 LAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFL 158 (297)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHH
T ss_pred hhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999999999999877543321111000 000 0 0
Q ss_pred hhh------------------------hhhcccccHHHHHHHHHhhhhc-----C-----------CCChhhhhhhhhee
Q 024228 164 ESW------------------------VDFLLPKTADALKVQFDIACYK-----L-----------PTLPAFVYKHILEK 203 (270)
Q Consensus 164 ~~~------------------------~~~~~~~~~~~~~~~~~~~~~~-----~-----------~~~~~~~~~~~~~P 203 (270)
... .....+................ . .......+.++.+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 238 (297)
T d1q0ra_ 159 DALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVP 238 (297)
T ss_dssp HHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSC
T ss_pred HHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhhhhccCCc
Confidence 000 0000001111111111100000 0 01112234555699
Q ss_pred eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 204 IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 204 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+++|+|++|.++|++.++.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 239 vlvi~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 239 TLVIQAEHDPIAPAPHGKHLAGLIP-TARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp EEEEEETTCSSSCTTHHHHHHHTST-TEEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 9999999999999999999999998 99999999999999999999999999999975
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=2.9e-38 Score=240.18 Aligned_cols=238 Identities=18% Similarity=0.207 Sum_probs=171.0
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQ 98 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~ 98 (270)
..+.++++ ||.+++|...+++.++|+||++||++++.. .|...+..+.+. |+|+++|+||||.|+.+. ..++.+.+
T Consensus 2 ~~~~~~~~-~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~-~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 79 (290)
T d1mtza_ 2 CIENYAKV-NGIYIYYKLCKAPEEKAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYG 79 (290)
T ss_dssp CEEEEEEE-TTEEEEEEEECCSSCSEEEEEECCTTTCCS-GGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHH
T ss_pred CccCeEEE-CCEEEEEEEcCCCCCCCeEEEECCCCCchH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccch
Confidence 34678888 899999999888777889999999988877 776666666555 999999999999998654 34789999
Q ss_pred HHHHHHHHHHh-CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--Hhhhhcc-------------
Q 024228 99 AECMAKGLRKL-GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERIG------------- 162 (270)
Q Consensus 99 ~~~~~~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~~~~~~~------------- 162 (270)
++|+.++++++ +.++++++||||||.+++.+|.++|++|++++++++.......... .......
T Consensus 80 ~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (290)
T d1mtza_ 80 VEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSS 159 (290)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHHHHhhhh
Confidence 99999999997 6889999999999999999999999999999999877543221100 0000000
Q ss_pred --c--hhh--------h-hhc-ccccHHHHHHHHHhhhh----------c--------CCCChhhhhhhhheeeeEEEcC
Q 024228 163 --Y--ESW--------V-DFL-LPKTADALKVQFDIACY----------K--------LPTLPAFVYKHILEKIHLLWGE 210 (270)
Q Consensus 163 --~--~~~--------~-~~~-~~~~~~~~~~~~~~~~~----------~--------~~~~~~~~~~~~~~P~l~i~g~ 210 (270)
. ... . ... ................. . ..........++.+|+++++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~ 239 (290)
T d1mtza_ 160 GSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGE 239 (290)
T ss_dssp TCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEET
T ss_pred ccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEEEeC
Confidence 0 000 0 000 00000000000000000 0 0011122344455999999999
Q ss_pred CCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 211 NDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 211 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+|.++| +.++.+.+.++ ++++++++++||++++|+|+++++.|.+||.++
T Consensus 240 ~D~~~~-~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 240 YDEVTP-NVARVIHEKIA-GSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp TCSSCH-HHHHHHHHHST-TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCCCH-HHHHHHHHHCC-CCEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 998765 67888888887 899999999999999999999999999999875
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-38 Score=245.61 Aligned_cols=241 Identities=21% Similarity=0.295 Sum_probs=177.9
Q ss_pred cCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC--CCC
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP--DRT 94 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~~ 94 (270)
..++...+|+++||.+++|...|. +|+|||+||+++++. .|..+++.|+++ |+|+++|+||||.|..+.. .++
T Consensus 8 p~~~~~~~v~~~~g~~i~y~~~G~---gp~vlllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 83 (322)
T d1zd3a2 8 PSDMSHGYVTVKPRVRLHFVELGS---GPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYC 83 (322)
T ss_dssp GGGSEEEEEEEETTEEEEEEEECC---SSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGS
T ss_pred CCCCceeEEEECCCCEEEEEEEcC---CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEecccccccccccccccccc
Confidence 347888999999999999998875 689999999999999 999999999877 9999999999999987653 368
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh---hHhh-------------
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS---NAAL------------- 158 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---~~~~------------- 158 (270)
.+++++++.+++++++.++++++||||||.+++.+|.++|++++++|+++++........ ....
T Consensus 84 ~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (322)
T d1zd3a2 84 MEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQE 163 (322)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTS
T ss_pred ccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhc
Confidence 899999999999999999999999999999999999999999999999986543221100 0000
Q ss_pred --------hhccchhhhhhc----------------------------ccc--cHHHHHHHH---Hhhh-------hcC-
Q 024228 159 --------ERIGYESWVDFL----------------------------LPK--TADALKVQF---DIAC-------YKL- 189 (270)
Q Consensus 159 --------~~~~~~~~~~~~----------------------------~~~--~~~~~~~~~---~~~~-------~~~- 189 (270)
............ ... ......... .... +..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1zd3a2 164 PGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNM 243 (322)
T ss_dssp TTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCH
T ss_pred cchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhccccccccccccc
Confidence 000000000000 000 000000000 0000 000
Q ss_pred ----CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 190 ----PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 190 ----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.........++.+|+++++|++|.+++++..+.+.+.++ +.++++++++||++++|+|+++++.|.+||++..
T Consensus 244 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~~~~ 320 (322)
T d1zd3a2 244 ERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP-HLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDA 320 (322)
T ss_dssp HHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT-TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHT
T ss_pred ccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCCchHHhCHHHHHHHHHHHHhhcC
Confidence 000011123344899999999999999999888888887 8999999999999999999999999999998764
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1.4e-37 Score=234.85 Aligned_cols=234 Identities=20% Similarity=0.140 Sum_probs=169.8
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+|+++||.+|+|...|+ +++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+...++.+.+++|+.
T Consensus 2 ~i~~~dG~~l~y~~~G~-~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 79 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGP-RDGLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVA 79 (275)
T ss_dssp EEECTTSCEEEEEEESC-TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred EEEecCCCEEEEEEecC-CCCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccccccccccccccc
Confidence 68899999999999886 45789999999999999 999999988766 9999999999999998777899999999999
Q ss_pred HHHHHhCCCceEEEEEch-hHHHHHHHHhhCccccccEEEecccCCCCchhh-------hHhhh----hc---cch----
Q 024228 104 KGLRKLGVEKCTLVGVSY-GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------NAALE----RI---GYE---- 164 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~-Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------~~~~~----~~---~~~---- 164 (270)
+++++++.++++++|||+ ||.+++.+|.++|++|+++|++++......... ..... .. ...
T Consensus 80 ~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (275)
T d1a88a_ 80 ALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYID 159 (275)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHH
T ss_pred cccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhHHHHHh
Confidence 999999999999999997 666777788999999999999987643221100 00000 00 000
Q ss_pred ----hhhhh--cccc-cHHHHHHHHH------------hhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHHH
Q 024228 165 ----SWVDF--LLPK-TADALKVQFD------------IACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNLK 224 (270)
Q Consensus 165 ----~~~~~--~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~ 224 (270)
..... .... .......... .............+.++.+|+++++|++|.++|.+. .+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~ 239 (275)
T d1a88a_ 160 VPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSA 239 (275)
T ss_dssp HHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHH
T ss_pred hhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHHH
Confidence 00000 0000 0000000000 000000111123345566999999999999998765 45566
Q ss_pred HHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 225 EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 225 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+.++ ++++++++++||+++.|+|+++++.|.+||+.
T Consensus 240 ~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 240 ELLA-NATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp HHST-TEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred HhCC-CCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 6666 89999999999999999999999999999973
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=1.4e-37 Score=239.24 Aligned_cols=240 Identities=17% Similarity=0.210 Sum_probs=173.6
Q ss_pred ceeEEEee---cCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC--CCCC
Q 024228 21 MTQRTIEI---EPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PDRT 94 (270)
Q Consensus 21 ~~~~~i~~---~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~ 94 (270)
++.+++.. .+|.+++|...|+.++.|+|||+||+++++. .|..++..|.+. |+|+++|+||||.|+.+. ..++
T Consensus 20 ~~~~~~~~~~~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 98 (310)
T d1b6ga_ 20 FSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYT 98 (310)
T ss_dssp CCCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCC
T ss_pred CCCceeccccCCCCEEEEEEEecCCCCCCEEEEECCCCCchH-HHHHHHHHhhccCceEEEeeecCcccccccccccccc
Confidence 44555542 2899999999988777889999999999999 999999999877 999999999999998654 3379
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc------------
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG------------ 162 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~------------ 162 (270)
.+.+++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.................
T Consensus 99 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T d1b6ga_ 99 FEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred ccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999998875432211110000000
Q ss_pred --------chhhhhhcccccHHH-----------------HHHHHHhhhhcCCC-------ChhhhhhhhheeeeEEEcC
Q 024228 163 --------YESWVDFLLPKTADA-----------------LKVQFDIACYKLPT-------LPAFVYKHILEKIHLLWGE 210 (270)
Q Consensus 163 --------~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~-------~~~~~~~~~~~P~l~i~g~ 210 (270)
.........+..... ...+.......... ........+.+|+++++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~ 258 (310)
T d1b6ga_ 179 LVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGM 258 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEET
T ss_pred hccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeC
Confidence 000000000000000 00000000000000 0001122334899999999
Q ss_pred CCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 211 NDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 211 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+|.+++++..+.+.+.++...++++++++||+++.++|+.+++.|.+||++
T Consensus 259 ~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 259 KDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp TCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 999999999999999887335789999999999989999999999999975
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=5.5e-37 Score=232.81 Aligned_cols=227 Identities=19% Similarity=0.218 Sum_probs=164.0
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHH----HHhhccceEEeecCCCCCCCCCCCCC-CChHHHHHHHHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQV----LALAKTYEVYVPDFLFFGSSVTDRPD-RTASFQAECMAK 104 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~----~~l~~~~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~ 104 (270)
++.+|+|...|+ +|+|||+||++++.. .|..+. ..+.++|+|+++|+||||.|...... .+...+++|+.+
T Consensus 18 ~~~~i~y~~~G~---G~~ivllHG~~~~~~-~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~ 93 (283)
T d2rhwa1 18 SDFNIHYNEAGN---GETVIMLHGGGPGAG-GWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG 93 (283)
T ss_dssp EEEEEEEEEECC---SSEEEEECCCSTTCC-HHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHH
T ss_pred CCEEEEEEEEcC---CCeEEEECCCCCChh-HHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhccc
Confidence 356899998885 789999999999988 886653 34455599999999999999876544 566677899999
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh---h----Hh---hhhccchh---hh-hhc
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS---N----AA---LERIGYES---WV-DFL 170 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---~----~~---~~~~~~~~---~~-~~~ 170 (270)
++++++.++++++||||||.+++.+|.++|++|+++|++++....+.... . .. ........ .. ...
T Consensus 94 li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (283)
T d2rhwa1 94 LMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFL 173 (283)
T ss_dssp HHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHC
T ss_pred ccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhh
Confidence 99999999999999999999999999999999999999998643221110 0 00 00000000 00 000
Q ss_pred -----cccc-H-----------HHHHHHHHhhhh--cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCc
Q 024228 171 -----LPKT-A-----------DALKVQFDIACY--KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNA 231 (270)
Q Consensus 171 -----~~~~-~-----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 231 (270)
.... . ............ ...+.....+.++.+|+++++|++|.++|++.++.+.+.++ ++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~ 252 (283)
T d2rhwa1 174 YDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID-DA 252 (283)
T ss_dssp SCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS-SE
T ss_pred cccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCC-CC
Confidence 0000 0 000000000000 01112233455566999999999999999999999999997 99
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++++++||+++.++|+++++.|.+||++
T Consensus 253 ~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 253 RLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp EEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999975
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=4.4e-37 Score=232.13 Aligned_cols=232 Identities=17% Similarity=0.153 Sum_probs=167.0
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+++++||.+++|...|+ +|+|||+||+++++. .|..+++.|.+. |+|+++|+||||.|+.+....+...+++|+.
T Consensus 2 ~~~t~dG~~l~y~~~G~---g~~ivlvHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~ 77 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWGQ---GRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLN 77 (274)
T ss_dssp EEECTTSCEEEEEEECS---SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEECcCCCEEEEEEECC---CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHHHH
Confidence 57889999999998885 689999999999999 999999988766 9999999999999998877889999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCchh-------hhHhhhhc----------cchh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTESV-------SNAALERI----------GYES 165 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~~~-------~~~~~~~~----------~~~~ 165 (270)
+++++++.++++++||||||.+++.++++ .|++|++++++++........ ........ ....
T Consensus 78 ~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (274)
T d1a8qa_ 78 DLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKD 157 (274)
T ss_dssp HHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhHHHhhh
Confidence 99999999999999999999998887655 588999999998764322110 00000000 0000
Q ss_pred hh-hhccc-----ccHHH-HHHHHHhhhh------------cCCCChhhhhhhhheeeeEEEcCCCccCCHHHH-HHHHH
Q 024228 166 WV-DFLLP-----KTADA-LKVQFDIACY------------KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA-RNLKE 225 (270)
Q Consensus 166 ~~-~~~~~-----~~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~ 225 (270)
.. ..... ..... .......... .........+.++.+|+++++|++|.++|.+.. +.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~ 237 (274)
T d1a8qa_ 158 TAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQ 237 (274)
T ss_dssp HHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHH
T ss_pred hhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHHHHHHHHH
Confidence 00 00000 00000 0000000000 000111223445569999999999999997654 56667
Q ss_pred HhcCCceEEEecCCCcceee--cchHhHHHHHHHHHHh
Q 024228 226 QVGQNATMESIEKAGHLVNL--ERPFVYNRQLKTILAS 261 (270)
Q Consensus 226 ~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~ 261 (270)
.++ ++++++++++||+.++ ++|+++++.|.+||++
T Consensus 238 ~~~-~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 238 IIP-NAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HST-TCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred hCC-CCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 777 8999999999999876 6789999999999974
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.3e-36 Score=229.32 Aligned_cols=232 Identities=16% Similarity=0.123 Sum_probs=167.9
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
++.++||.+++|...|+ +|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.|+.+...++.+.+++|+.
T Consensus 2 ~f~~~dG~~i~y~~~G~---g~pvvllHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 77 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWGS---GQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLA 77 (273)
T ss_dssp EEECTTSCEEEEEEESC---SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred EEEeeCCcEEEEEEECC---CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEechhcCccccccccccccchHHHHH
Confidence 56778999999998876 788999999999999 999999999766 9999999999999998877899999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHH-HHhhCccccccEEEecccCCCCchh-------hhHhhh---hcc-------chh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFK-MAEMYPDLVESMVVTCSVMGLTESV-------SNAALE---RIG-------YES 165 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~-~a~~~p~~v~~~i~~~~~~~~~~~~-------~~~~~~---~~~-------~~~ 165 (270)
+++++++.++.+++|||+||.+++. ++..+|++|++++++++........ ...... ... ...
T Consensus 78 ~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
T d1a8sa_ 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKD 157 (273)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999998865555 5566799999999998765422110 000000 000 000
Q ss_pred hhh-h----c---ccccHHHHHHHHHhhh------------hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 166 WVD-F----L---LPKTADALKVQFDIAC------------YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 166 ~~~-~----~---~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
... . . ................ ..........+.++.+|+++++|++|.++|.+..+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~~ 237 (273)
T d1a8sa_ 158 LASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASA 237 (273)
T ss_dssp HHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHH
T ss_pred HhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHHHHHHHHH
Confidence 000 0 0 0000000000000000 000111223345556999999999999999888777776
Q ss_pred HhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 226 QVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 226 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+.+++++++++++||++++++|+++++.|.+||+
T Consensus 238 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 238 ALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 66448999999999999999999999999999997
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=8.6e-37 Score=230.77 Aligned_cols=226 Identities=20% Similarity=0.195 Sum_probs=162.4
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL 109 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~ 109 (270)
+.+|+|...|+ +|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.|+.....++.+.+++|+.++++++
T Consensus 12 ~v~i~y~~~G~---G~~ivllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l 87 (277)
T d1brta_ 12 SIDLYYEDHGT---GQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL 87 (277)
T ss_dssp EEEEEEEEECS---SSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEEcc---CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhcc
Confidence 45678887775 789999999999999 999999888766 9999999999999997777789999999999999999
Q ss_pred CCCceEEEEEchhH-HHHHHHHhhCccccccEEEecccCCCCchhh--------hH----hhhhcc------chhh----
Q 024228 110 GVEKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGLTESVS--------NA----ALERIG------YESW---- 166 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~--------~~----~~~~~~------~~~~---- 166 (270)
+.++++++|||||| .++..++..+|++|+++|++++..+...... .. ...... ....
T Consensus 88 ~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (277)
T d1brta_ 88 DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDF 167 (277)
T ss_dssp TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhccccc
Confidence 99999999999996 5566677888999999999987653321100 00 000000 0000
Q ss_pred ---hhhcccc-cHHHHHHHHHh---------hh--hcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHHHHHhcCC
Q 024228 167 ---VDFLLPK-TADALKVQFDI---------AC--YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNLKEQVGQN 230 (270)
Q Consensus 167 ---~~~~~~~-~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~ 230 (270)
....... ........... .. ..........+.++.+|+++++|++|.+++.+. .+.+.+.++ +
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~ 246 (277)
T d1brta_ 168 YNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP-S 246 (277)
T ss_dssp TTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCT-T
T ss_pred cccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCC-C
Confidence 0000000 00001111000 00 000111223345556999999999999998765 455666776 9
Q ss_pred ceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 231 ATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 231 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+++++++++||+++.|+|+++++.|.+||++
T Consensus 247 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 247 AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 9999999999999999999999999999974
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=3.2e-36 Score=231.94 Aligned_cols=237 Identities=17% Similarity=0.087 Sum_probs=165.2
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC--CCCChH
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTAS 96 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~ 96 (270)
...+.++++++||.+++|...|+ +++++|||+||++++.. .|......+.++|+|+++|+||||.|+.+. ..++.+
T Consensus 9 ~P~~~~~i~~~dg~~i~y~~~G~-~~g~pvvllHG~~g~~~-~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 86 (313)
T d1azwa_ 9 TPYQQGSLKVDDRHTLYFEQCGN-PHGKPVVMLHGGPGGGC-NDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTW 86 (313)
T ss_dssp CCSEEEEEECSSSCEEEEEEEEC-TTSEEEEEECSTTTTCC-CGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHH
T ss_pred CCCCCCEEEeCCCcEEEEEEecC-CCCCEEEEECCCCCCcc-chHHHhHHhhcCCEEEEEeccccCCCCccccccchhHH
Confidence 35689999999999999998886 45788999999998888 887766666666999999999999998654 347899
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH---------------hhhhc
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA---------------ALERI 161 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~---------------~~~~~ 161 (270)
++++|+.+++++++.++++|+||||||.+++.+|.++|++|++++++++........... .....
T Consensus 87 ~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
T d1azwa_ 87 DLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAI 166 (313)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999876543211110 00000
Q ss_pred cchh-------hhhhccccc-HHHH---HHHH-------------------------------Hhhh--hcC-CC----C
Q 024228 162 GYES-------WVDFLLPKT-ADAL---KVQF-------------------------------DIAC--YKL-PT----L 192 (270)
Q Consensus 162 ~~~~-------~~~~~~~~~-~~~~---~~~~-------------------------------~~~~--~~~-~~----~ 192 (270)
.... ....+.... .... ..+. .... ... .. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
T d1azwa_ 167 PPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQL 246 (313)
T ss_dssp CGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred hhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccccchhh
Confidence 0000 000000000 0000 0000 0000 000 00 0
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHH
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTI 258 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~f 258 (270)
.......+.+|+++++|++|.++|++.++.+.+.++ ++++++++++||+++. +..+++.+.+.+|
T Consensus 247 ~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p-~a~~~~i~~aGH~~~ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 247 LRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWP-KAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCT-TSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCCCCCchHHHHHHHHHHHh
Confidence 111223334899999999999999999999999998 9999999999998752 2223344444544
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-37 Score=224.01 Aligned_cols=195 Identities=19% Similarity=0.256 Sum_probs=158.0
Q ss_pred eeEEEeecCCeEEEEEecC--CCCCCceEEEeCCCCCcccccHHHH--HHHhhcc-ceEEeecCCCCCCCCCCCCC--CC
Q 024228 22 TQRTIEIEPGTILNIWVPK--KTTKKHAVVLLHPFGFDGILTWQFQ--VLALAKT-YEVYVPDFLFFGSSVTDRPD--RT 94 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~~--~~~l~~~-~~v~~~d~~g~G~s~~~~~~--~~ 94 (270)
++.+|.+ +|.+++|+..+ ..+.+++|||+||++++.. .|..+ ++.|++. |+|+++|+||||.|+..... ++
T Consensus 7 ~e~~i~v-~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~-~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~ 84 (208)
T d1imja_ 7 REGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIG 84 (208)
T ss_dssp CCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTT
T ss_pred eEEEEEE-CCEEEEEEEecCCCCCCCCeEEEECCCCCChh-HHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccc
Confidence 4556777 89999996544 3356789999999999988 89764 6788887 99999999999999866533 44
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccccc
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (270)
.....+++.++++.++.++++|+||||||.+++.+|.++|++++++|+++|.....
T Consensus 85 ~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~------------------------ 140 (208)
T d1imja_ 85 ELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------------------ 140 (208)
T ss_dssp SCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG------------------------
T ss_pred hhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc------------------------
Confidence 45557788899999999999999999999999999999999999999998753210
Q ss_pred HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHH
Q 024228 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 254 (270)
.....+..+.+|+|+|+|++|.++|.+. +..+.++ +.++.+++++||..++++|+++.+.
T Consensus 141 -----------------~~~~~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~~-~~~~~~i~~~gH~~~~~~p~~~~~~ 200 (208)
T d1imja_ 141 -----------------INAANYASVKTPALIVYGDQDPMGQTSF--EHLKQLP-NHRVLIMKGAGHPCYLDKPEEWHTG 200 (208)
T ss_dssp -----------------SCHHHHHTCCSCEEEEEETTCHHHHHHH--HHHTTSS-SEEEEEETTCCTTHHHHCHHHHHHH
T ss_pred -----------------cccccccccccccccccCCcCcCCcHHH--HHHHhCC-CCeEEEECCCCCchhhhCHHHHHHH
Confidence 0011233445899999999999987553 3445566 8999999999999999999999999
Q ss_pred HHHHHHhh
Q 024228 255 LKTILASL 262 (270)
Q Consensus 255 i~~fl~~~ 262 (270)
+.+||+++
T Consensus 201 l~~Fl~~L 208 (208)
T d1imja_ 201 LLDFLQGL 208 (208)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999863
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=1e-35 Score=225.15 Aligned_cols=225 Identities=21% Similarity=0.216 Sum_probs=160.7
Q ss_pred eEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC
Q 024228 32 TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG 110 (270)
Q Consensus 32 ~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~ 110 (270)
++|+|...|. +|+|||+||+++++. .|..+++.|.+. |+|+++|+||||.|+.+...++.+.+++|+.+++++++
T Consensus 13 v~i~y~~~G~---g~~illlHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l~ 88 (279)
T d1hkha_ 13 IELYYEDQGS---GQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLD 88 (279)
T ss_dssp EEEEEEEESS---SEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEcc---CCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhhcC
Confidence 4778888875 789999999999999 999999877555 99999999999999988778999999999999999999
Q ss_pred CCceEEEEEchhH-HHHHHHHhhCccccccEEEecccCCCCchhh-------hHhhhhc-------c---chh-------
Q 024228 111 VEKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------NAALERI-------G---YES------- 165 (270)
Q Consensus 111 ~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------~~~~~~~-------~---~~~------- 165 (270)
.++++|+|||||| .++..+|..+|++|++++++++..+...... ....... . ...
T Consensus 89 ~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (279)
T d1hkha_ 89 LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYN 168 (279)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred cCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhhcc
Confidence 9999999999996 5666677788999999999987654321110 0000000 0 000
Q ss_pred hhhhcccc-cHHHHHHHHHhhhhcC------------CC--ChhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHhcC
Q 024228 166 WVDFLLPK-TADALKVQFDIACYKL------------PT--LPAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQVGQ 229 (270)
Q Consensus 166 ~~~~~~~~-~~~~~~~~~~~~~~~~------------~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~ 229 (270)
........ ................ .. .....+..+.+|+++++|++|.+++.+ ..+.+.+.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p- 247 (279)
T d1hkha_ 169 LDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP- 247 (279)
T ss_dssp HHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCT-
T ss_pred cchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCC-
Confidence 00000000 0000111111000000 00 011223344599999999999999865 5677777777
Q ss_pred CceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 230 NATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++++++++||+++.|+|+++++.|.+||++
T Consensus 248 ~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 248 EADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp TSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 89999999999999999999999999999974
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=8.3e-36 Score=224.44 Aligned_cols=231 Identities=19% Similarity=0.164 Sum_probs=166.4
Q ss_pred eecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024228 27 EIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105 (270)
Q Consensus 27 ~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 105 (270)
...||.+|+|...|+ +|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.|+.+....+.+.+++++.++
T Consensus 4 ~~~dG~~l~y~~~G~---g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 79 (271)
T d1va4a_ 4 VAKDGTQIYFKDWGS---GKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQL 79 (271)
T ss_dssp ECTTSCEEEEEEESS---SSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHH
T ss_pred EeECCeEEEEEEEcC---CCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccccccccccccccccceee
Confidence 344899999998886 688999999999999 999999999876 999999999999999887788999999999999
Q ss_pred HHHhCCCceEEEEEchhHHHH-HHHHhhCccccccEEEecccCCCCchhh-------hHhhhhcc----------chhhh
Q 024228 106 LRKLGVEKCTLVGVSYGGMVG-FKMAEMYPDLVESMVVTCSVMGLTESVS-------NAALERIG----------YESWV 167 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a-~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------~~~~~~~~----------~~~~~ 167 (270)
++.++.++++++|||+||.++ ..+|..+|+++.+++++++......... ........ .....
T Consensus 80 ~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (271)
T d1va4a_ 80 IEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFN 159 (271)
T ss_dssp HHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhhhhhhhc
Confidence 999999999999999988665 4566778999999999987654321110 00000000 00000
Q ss_pred -hh----cccccHHHH-------------HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC
Q 024228 168 -DF----LLPKTADAL-------------KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ 229 (270)
Q Consensus 168 -~~----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 229 (270)
.. ......... ..................+.++.+|+++++|++|.++|.+...++.+.+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~ 239 (271)
T d1va4a_ 160 APFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIK 239 (271)
T ss_dssp HHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHHST
T ss_pred chhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHhCC
Confidence 00 000000000 000000000001112233455569999999999999998887777655434
Q ss_pred CceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 230 NATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++++++++||+++.++|+++++.|.+||++
T Consensus 240 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 240 GAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp TCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 89999999999999999999999999999974
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.1e-36 Score=225.45 Aligned_cols=220 Identities=17% Similarity=0.183 Sum_probs=152.6
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK 113 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~ 113 (270)
|+|...|. ++++|||+||++++.. .|..+++.|+++|+|+++|+||||.|+... ..+.. |+.+.+..+..++
T Consensus 2 i~y~~~G~--g~~~lvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~-~~~~~----d~~~~~~~~~~~~ 73 (256)
T d1m33a_ 2 IWWQTKGQ--GNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLA----DMAEAVLQQAPDK 73 (256)
T ss_dssp CCEEEECC--CSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTCCSCC-CCCHH----HHHHHHHTTSCSS
T ss_pred eEEEEECC--CCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEeCCCCCCccccc-ccccc----ccccccccccccc
Confidence 45666665 4588999999999999 999999999988999999999999998543 33433 4445555666789
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-----hHhh----hhcc---chhhh-----hhcccccHH
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-----NAAL----ERIG---YESWV-----DFLLPKTAD 176 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-----~~~~----~~~~---~~~~~-----~~~~~~~~~ 176 (270)
++++||||||.+++.+|.++|+++++++++++......... .... .... ..... .........
T Consensus 74 ~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
T d1m33a_ 74 AIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETAR 153 (256)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHH
T ss_pred eeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccchh
Confidence 99999999999999999999999999999986643321110 0000 0000 00000 000011111
Q ss_pred HHHHHHHhhhhcC----------------CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC
Q 024228 177 ALKVQFDIACYKL----------------PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240 (270)
Q Consensus 177 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (270)
............. .......+.++.+|+++++|++|.++|++.++.+.+.++ ++++++++++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~-~~~~~~i~~~g 232 (256)
T d1m33a_ 154 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAA 232 (256)
T ss_dssp HHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT-TCEEEEETTCC
T ss_pred hHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCC-CCEEEEECCCC
Confidence 1100000000000 011122344556899999999999999999988888887 89999999999
Q ss_pred cceeecchHhHHHHHHHHHHhh
Q 024228 241 HLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~~~ 262 (270)
|++++|+|+++++.|.+||++.
T Consensus 233 H~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 233 HAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp SCHHHHSHHHHHHHHHHHHTTS
T ss_pred CchHHHCHHHHHHHHHHHHHHc
Confidence 9999999999999999999875
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=6e-34 Score=212.13 Aligned_cols=216 Identities=21% Similarity=0.126 Sum_probs=157.0
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhCC-CceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLGV-EKCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~ 121 (270)
+++|||+||+++++. .|..+++.|+++ |+|+++|+||||.|+.+. ..++.++++.|+..+++.... .+++++|||+
T Consensus 2 G~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~ 80 (258)
T d1xkla_ 2 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSL 80 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETT
T ss_pred CCcEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccccccccccccch
Confidence 689999999999999 999999999987 999999999999998654 347888999999999988765 5899999999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh----hhccchhh-------------------------hhhccc
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL----ERIGYESW-------------------------VDFLLP 172 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~-------------------------~~~~~~ 172 (270)
||.+++.++.++|++++++|++++............. ........ ......
T Consensus 81 Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T d1xkla_ 81 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQ 160 (258)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTST
T ss_pred hHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHhhh
Confidence 9999999999999999999999876543322111100 00000000 000000
Q ss_pred ccHHHHHHHHHhhhhcCCCC--------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCccee
Q 024228 173 KTADALKVQFDIACYKLPTL--------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVN 244 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 244 (270)
.................... .........+|+++++|++|.++|++..+.+.+.++ ++++++++++||+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~ 239 (258)
T d1xkla_ 161 LCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG-VTEAIEIKGADHMAM 239 (258)
T ss_dssp TSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHC-CSEEEEETTCCSCHH
T ss_pred cccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCchH
Confidence 00000000000000000000 011123344899999999999999999999999998 999999999999999
Q ss_pred ecchHhHHHHHHHHHHhh
Q 024228 245 LERPFVYNRQLKTILASL 262 (270)
Q Consensus 245 ~~~~~~~~~~i~~fl~~~ 262 (270)
+++|+++++.|.+|+++.
T Consensus 240 ~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 240 LCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp HHSHHHHHHHHHHHHHHC
T ss_pred HhCHHHHHHHHHHHHHhc
Confidence 999999999999999864
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=4.1e-34 Score=213.13 Aligned_cols=213 Identities=17% Similarity=0.109 Sum_probs=154.7
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhC-CCceEEEEEchhH
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGG 123 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg 123 (270)
-.||+||+++++. .|..+++.|+++ |+|+++|+||||.|+.+. ..++.+++++++.++++++. .++++|+||||||
T Consensus 4 ~~vliHG~~~~~~-~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg 82 (256)
T d3c70a1 4 HFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGG 82 (256)
T ss_dssp EEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHH
T ss_pred cEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhccccceeecccchHH
Confidence 4689999999998 999999999987 999999999999998764 44789999999999988865 6789999999999
Q ss_pred HHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh----ccc-----------------------hhhhhhcccccHH
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER----IGY-----------------------ESWVDFLLPKTAD 176 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~----~~~-----------------------~~~~~~~~~~~~~ 176 (270)
.+++.++.++|++|+++|++++............... ... .............
T Consensus 83 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (256)
T d3c70a1 83 LNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGP 162 (256)
T ss_dssp HHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCH
T ss_pred HHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcch
Confidence 9999999999999999999997654332211110000 000 0000000000000
Q ss_pred HHHHHHHhhhhcC-CCC--------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 177 ALKVQFDIACYKL-PTL--------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 177 ~~~~~~~~~~~~~-~~~--------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
............ ... .........+|+++|+|++|..+|++..+.+.+.++ +.++++++++||++++++
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~agH~~~~e~ 240 (256)
T d3c70a1 163 -EEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK-PDKVYKVEGGDHKLQLTK 240 (256)
T ss_dssp -HHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC-CSEEEECCSCCSCHHHHS
T ss_pred -hhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCchHHhC
Confidence 000000111000 000 001122234899999999999999999999999998 899999999999999999
Q ss_pred hHhHHHHHHHHHHhh
Q 024228 248 PFVYNRQLKTILASL 262 (270)
Q Consensus 248 ~~~~~~~i~~fl~~~ 262 (270)
|+++++.|.+|+++.
T Consensus 241 P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 241 TKEIAEILQEVADTY 255 (256)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998763
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=1.5e-33 Score=215.81 Aligned_cols=231 Identities=18% Similarity=0.134 Sum_probs=165.0
Q ss_pred cCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC--CCCh
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP--DRTA 95 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~--~~~~ 95 (270)
....+.++++++||.+++|...|+ +++|+|||+||+++++. .|..+...|+++|+|+++|+||+|.|+.... .++.
T Consensus 8 ~~p~~~~~v~~~dG~~i~y~~~G~-~~g~pvvllHG~~~~~~-~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~~~~ 85 (313)
T d1wm1a_ 8 LAAYDSGWLDTGDGHRIYWELSGN-PNGKPAVFIHGGPGGGI-SPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTT 85 (313)
T ss_dssp CCCSEEEEEECSSSCEEEEEEEEC-TTSEEEEEECCTTTCCC-CGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSH
T ss_pred CCCCcCCEEEeCCCcEEEEEEecC-CCCCeEEEECCCCCccc-chHHHHHHhhcCCEEEEEeCCCcccccccccccccch
Confidence 456788899999999999999887 45789999999999999 9999988888889999999999999976543 4778
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh--------------hhc
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL--------------ERI 161 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~--------------~~~ 161 (270)
..+.+|+..++++++..+++++|||+||.++..+|...|++|.+++++++............. ...
T Consensus 86 ~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (313)
T d1wm1a_ 86 WHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSI 165 (313)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTT
T ss_pred hhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhhhh
Confidence 899999999999999999999999999999999999999999999999876543211100000 000
Q ss_pred cch--------hhhhhcccccH--------------------------------HHHHHH-------HHhhhhcC--CCC
Q 024228 162 GYE--------SWVDFLLPKTA--------------------------------DALKVQ-------FDIACYKL--PTL 192 (270)
Q Consensus 162 ~~~--------~~~~~~~~~~~--------------------------------~~~~~~-------~~~~~~~~--~~~ 192 (270)
... ........... ...... ........ ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
T d1wm1a_ 166 LSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQL 245 (313)
T ss_dssp SCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred hhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccchhh
Confidence 000 00000000000 000000 00000000 001
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHH
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 253 (270)
.......+.+|+++++|++|.++|++.++.+.+.++ ++++++++++||++ ++|+.+.+
T Consensus 246 ~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p-~a~~~~i~~aGH~~--~eP~~~~~ 303 (313)
T d1wm1a_ 246 LRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP-EAELHIVEGAGHSY--DEPGILHQ 303 (313)
T ss_dssp HHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT-TSEEEEETTCCSST--TSHHHHHH
T ss_pred hhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCC-CCEEEEECCCCCCc--CCchHHHH
Confidence 112222334899999999999999999999999998 99999999999964 45765543
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=3e-34 Score=218.40 Aligned_cols=235 Identities=12% Similarity=0.059 Sum_probs=159.9
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC----CChHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD----RTASF 97 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----~~~~~ 97 (270)
+.+++++ +|.+++|...|+ +|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+..... .....
T Consensus 9 ~~~fi~~-~g~~i~y~~~G~---g~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 83 (298)
T d1mj5a_ 9 EKKFIEI-KGRRMAYIDEGT---GDPILFQHGNPTSSY-LWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAE 83 (298)
T ss_dssp CCEEEEE-TTEEEEEEEESC---SSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHH
T ss_pred CCEEEEE-CCEEEEEEEEcC---CCcEEEECCCCCCHH-HHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccch
Confidence 5678888 899999998875 789999999999999 99999999998899999999999999876533 33445
Q ss_pred HHHHHHHHHHH-hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh------h-ccc------
Q 024228 98 QAECMAKGLRK-LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE------R-IGY------ 163 (270)
Q Consensus 98 ~~~~~~~~l~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~------~-~~~------ 163 (270)
..+++..++.. .+.++++++||||||.+++.+|.++|++|.+++++++.............. . ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (298)
T d1mj5a_ 84 HRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVL 163 (298)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHT
T ss_pred hhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhhhhhhh
Confidence 55555555544 456799999999999999999999999999999998765432211100000 0 000
Q ss_pred -------hhhhhhccc-ccHHHHHHHHH--------------hhhhcC--CCC---------hhhhhhhhheeeeEEEcC
Q 024228 164 -------ESWVDFLLP-KTADALKVQFD--------------IACYKL--PTL---------PAFVYKHILEKIHLLWGE 210 (270)
Q Consensus 164 -------~~~~~~~~~-~~~~~~~~~~~--------------~~~~~~--~~~---------~~~~~~~~~~P~l~i~g~ 210 (270)
......... ........... ...... ... ....+....+|+++++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 243 (298)
T d1mj5a_ 164 QDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAE 243 (298)
T ss_dssp TTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEE
T ss_pred hhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEEEEecC
Confidence 000000000 00000000000 000000 000 011123334999999999
Q ss_pred CCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 211 NDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 211 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
+|.+.+ ...+.+.+.++ +.++++++ +||++++|+|+++++.|.+||++...
T Consensus 244 ~d~~~~-~~~~~~~~~~p-~~~~~~~~-~GH~~~~e~P~~v~~~i~~fl~~~~~ 294 (298)
T d1mj5a_ 244 PGALTT-GRMRDFCRTWP-NQTEITVA-GAHFIQEDSPDEIGAAIAAFVRRLRP 294 (298)
T ss_dssp ECSSSS-HHHHHHHTTCS-SEEEEEEE-ESSCGGGTCHHHHHHHHHHHHHHHSC
T ss_pred CCCcCh-HHHHHHHHHCC-CCEEEEeC-CCCchHHhCHHHHHHHHHHHHhhhcc
Confidence 998765 45677777776 77777665 69999999999999999999998743
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=6.5e-32 Score=201.67 Aligned_cols=223 Identities=17% Similarity=0.162 Sum_probs=143.4
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRK 108 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~ 108 (270)
+.+++|..+++ ++|+|||+||+++++. .|..+++.|++. |+|+++|+||||.|...... ........+.......
T Consensus 4 ~~~lh~~~~~~--~~P~ivllHG~~~~~~-~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
T d1r3da_ 4 SNQLHFAKPTA--RTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHV 80 (264)
T ss_dssp CEEEESSCCBT--TBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTTC
T ss_pred CCeEEEcCCCC--CCCeEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhcccccc
Confidence 56788766554 5789999999999999 999999999876 99999999999999866543 2222333333334444
Q ss_pred hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh--------------hhccchhh-h----h-
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL--------------ERIGYESW-V----D- 168 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~-~----~- 168 (270)
...++++++||||||.+++.++.++|+++.+++++.+............. ........ . .
T Consensus 81 ~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T d1r3da_ 81 TSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQA 160 (264)
T ss_dssp CTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSG
T ss_pred cccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 56679999999999999999999999999998877655432211100000 00000000 0 0
Q ss_pred hcccccHH---------------HHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceE
Q 024228 169 FLLPKTAD---------------ALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATM 233 (270)
Q Consensus 169 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 233 (270)
........ ....................+..+.+|+++++|++|..++ .+.+. + +.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~-----~~~~~-~-~~~~ 233 (264)
T d1r3da_ 161 VFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAES-S-GLSY 233 (264)
T ss_dssp GGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHH-H-CSEE
T ss_pred hhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH-----HHHhc-C-CCeE
Confidence 00000000 0111111111111222233445556999999999996532 23332 3 8999
Q ss_pred EEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 234 ESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++++++||++++|+|+++++.|.+||+++.
T Consensus 234 ~~i~~~gH~~~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 234 SQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp EEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999864
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.8e-31 Score=203.43 Aligned_cols=225 Identities=12% Similarity=0.126 Sum_probs=151.8
Q ss_pred ceeEEEeecCCeEEEEEecCCC----CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCCCCCC
Q 024228 21 MTQRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRT 94 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~~~~~ 94 (270)
...+.+++.||..+++|...+. .++++||++||++++.. .|..+++.|+++ |+|+++|+||| |.|++.....+
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~-~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~ 82 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFT 82 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------CCC
T ss_pred eeeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCC
Confidence 4568899999999998865432 34578999999999998 999999999998 99999999998 88887777788
Q ss_pred hHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhh
Q 024228 95 ASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVD 168 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 168 (270)
...+.+|+.++++.+ +.++++|+||||||.+++.+|... +++++|+.+|................ .......
T Consensus 83 ~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~~--~v~~li~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (302)
T d1thta_ 83 MTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDL--ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPN 160 (302)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTTS--CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGGCCS
T ss_pred HHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhccc--ccceeEeecccccHHHHHHHHHhhccchhhhhhccc
Confidence 888888888777766 567999999999999999888753 48999999887654322111110000 0000000
Q ss_pred hcccccHHHHHHHHHhhhhcCCCC----hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcce
Q 024228 169 FLLPKTADALKVQFDIACYKLPTL----PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLV 243 (270)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 243 (270)
.............+........+. ....+.++.+|+|+++|++|.+||++.++.+.+.++ +++++++++|++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l 240 (302)
T d1thta_ 161 DLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDL 240 (302)
T ss_dssp EEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCT
T ss_pred cccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCccc
Confidence 000000000011111111111111 223355566999999999999999999999999887 468999999999987
Q ss_pred eecchH
Q 024228 244 NLERPF 249 (270)
Q Consensus 244 ~~~~~~ 249 (270)
. +++.
T Consensus 241 ~-e~~~ 245 (302)
T d1thta_ 241 G-ENLV 245 (302)
T ss_dssp T-SSHH
T ss_pred c-cChH
Confidence 3 5554
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.98 E-value=1.9e-31 Score=209.87 Aligned_cols=241 Identities=15% Similarity=0.152 Sum_probs=158.9
Q ss_pred CceeEEEeecCCeEEEEEec-------CCCCCCceEEEeCCCCCcccccHH------HHHHHhhcc-ceEEeecCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNIWVP-------KKTTKKHAVVLLHPFGFDGILTWQ------FQVLALAKT-YEVYVPDFLFFGS 85 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~-------~~~~~~~~vv~~hG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~g~G~ 85 (270)
..+.+.|+++||..|..+.. ....++|+||++||+++++. .|. .++..|+++ |+|+++|+||||.
T Consensus 26 ~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~-~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~ 104 (377)
T d1k8qa_ 26 PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGYDVWLGNSRGNTW 104 (377)
T ss_dssp CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTCEEEECCCTTSTT
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchh-HHhhcCccchHHHHHHHCCCEEEEEcCCCCCC
Confidence 35788999999988765321 12245789999999999988 884 367888877 9999999999999
Q ss_pred CCCCCC---------CCChH-----HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc
Q 024228 86 SVTDRP---------DRTAS-----FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE 151 (270)
Q Consensus 86 s~~~~~---------~~~~~-----~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~ 151 (270)
|+.+.. ..+.+ ++.+++..+++.++.++++++||||||.+++.+|..+|+++++++++........
T Consensus 105 S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~ 184 (377)
T d1k8qa_ 105 ARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVAT 184 (377)
T ss_dssp SCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSC
T ss_pred CCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeecccccc
Confidence 975432 12333 3455666677778999999999999999999999999999998887665432211
Q ss_pred h-----hhhHhhhhc----------c-------chh-hh-hhccc-----------------------------------
Q 024228 152 S-----VSNAALERI----------G-------YES-WV-DFLLP----------------------------------- 172 (270)
Q Consensus 152 ~-----~~~~~~~~~----------~-------~~~-~~-~~~~~----------------------------------- 172 (270)
. ......... . ... .. .....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (377)
T d1k8qa_ 185 VKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNP 264 (377)
T ss_dssp CSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCC
T ss_pred ccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhccc
Confidence 0 000000000 0 000 00 00000
Q ss_pred --ccHHHHHHHHHhhh------------------hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCce
Q 024228 173 --KTADALKVQFDIAC------------------YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNAT 232 (270)
Q Consensus 173 --~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 232 (270)
........+..... +.....+...+.++.+|+|+++|++|.+++++.++.+.+.++...+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~~~ 344 (377)
T d1k8qa_ 265 AGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIY 344 (377)
T ss_dssp CCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEEE
T ss_pred ccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCCeE
Confidence 00000000000000 0000111122455568999999999999999999999999983357
Q ss_pred EEEecCCCcceee---cchHhHHHHHHHHHHh
Q 024228 233 MESIEKAGHLVNL---ERPFVYNRQLKTILAS 261 (270)
Q Consensus 233 ~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 261 (270)
.++++++||+.++ +.++++...|.+||++
T Consensus 345 ~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 345 HRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred EEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 8899999998543 6689999999999975
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.98 E-value=4.6e-31 Score=194.50 Aligned_cols=215 Identities=17% Similarity=0.187 Sum_probs=145.9
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHH---HHHhCCCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG---LRKLGVEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~l~G~ 119 (270)
++++|||+||++++.. .|..+++.|+++ |+|+++|+||||.|.............+++..+ ++..+.++++++||
T Consensus 10 ~~~~vvliHG~~~~~~-~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 88 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGL 88 (242)
T ss_dssp SSCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhcccCceEEEEc
Confidence 3678999999999999 999999999987 999999999999987655555555555554444 45567889999999
Q ss_pred chhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCC--------
Q 024228 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPT-------- 191 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 191 (270)
|+||.+++.++.++|. ..++++++........................ .....................
T Consensus 89 S~Gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (242)
T d1tqha_ 89 SLGGVFSLKLGYTVPI--EGIVTMCAPMYIKSEETMYEGVLEYAREYKKR-EGKSEEQIEQEMEKFKQTPMKTLKALQEL 165 (242)
T ss_dssp THHHHHHHHHHTTSCC--SCEEEESCCSSCCCHHHHHHHHHHHHHHHHHH-HTCCHHHHHHHHHHHTTSCCTTHHHHHHH
T ss_pred chHHHHhhhhcccCcc--cccccccccccccchhHHHHHHHHHHHHHhhh-ccchhhhHHHHHhhhhhhccchhhccccc
Confidence 9999999999999885 45566665544332211110000000000000 000001111110000000000
Q ss_pred --ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeec-chHhHHHHHHHHHHhh
Q 024228 192 --LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILASL 262 (270)
Q Consensus 192 --~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 262 (270)
.....+..+.+|+|+++|++|..+|++.++.+.+.++ +++++++++++||+++.+ +++++.+.|.+||+++
T Consensus 166 ~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 166 IADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp HHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred ccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 0112233444899999999999999999999999885 368999999999999886 5899999999999875
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.97 E-value=2.4e-30 Score=204.75 Aligned_cols=240 Identities=13% Similarity=0.112 Sum_probs=165.0
Q ss_pred cCCceeEEEeecCCeEEEEEecC-CCCCCceEEEeCCCCCcccccHHHHHHHhhcc-------ceEEeecCCCCCCCCCC
Q 024228 18 LVGMTQRTIEIEPGTILNIWVPK-KTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-------YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~-~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-------~~v~~~d~~g~G~s~~~ 89 (270)
...+....+++ +|.+|||...+ ..+++++|||+||++++.. .|..+++.|++. |+|+++|+||+|.|+.+
T Consensus 79 ln~~~~f~~~i-~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~-~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P 156 (394)
T d1qo7a_ 79 LNSFPQFTTEI-EGLTIHFAALFSEREDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGP 156 (394)
T ss_dssp HTTSCEEEEEE-TTEEEEEEEECCSCTTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCC
T ss_pred HHcCCCeEEEE-CCEEEEEEEEeccCCCCCEEEEeccccccHH-HHHHHHHhhccccCCcccceeeecccccccCCCCCC
Confidence 34555555667 79999996543 3456899999999999999 999999999875 89999999999999976
Q ss_pred C--CCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh---------Hhh
Q 024228 90 R--PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN---------AAL 158 (270)
Q Consensus 90 ~--~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~---------~~~ 158 (270)
. ..++...+++++..+++.++.++.+++|||+||.++..++..+|+++.+++++............ ...
T Consensus 157 ~~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T d1qo7a_ 157 PLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGI 236 (394)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHHHH
Confidence 4 35889999999999999999999999999999999999999999999999888765432211000 000
Q ss_pred hhcc-------c--------hh--------------------hhhhcc-cccHHHHHHHHHhhh---------------h
Q 024228 159 ERIG-------Y--------ES--------------------WVDFLL-PKTADALKVQFDIAC---------------Y 187 (270)
Q Consensus 159 ~~~~-------~--------~~--------------------~~~~~~-~~~~~~~~~~~~~~~---------------~ 187 (270)
.... . .. ...... ......+........ .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~ 316 (394)
T d1qo7a_ 237 ARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETT 316 (394)
T ss_dssp HHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHC
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhccccchhHHHHHHHh
Confidence 0000 0 00 000000 000000000000000 0
Q ss_pred cCCC-----ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 188 KLPT-----LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 188 ~~~~-----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.... .......++.+|+++++|.+|...+++ .+.+.+.....+.+++++||++++|+|+++++.|.+||+++
T Consensus 317 ~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 317 PTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp C---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHH
T ss_pred hcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCHHHHHHHHHHHHHHh
Confidence 0000 000111234489999999999877654 34455552356788999999999999999999999999875
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=4.5e-31 Score=197.78 Aligned_cols=101 Identities=18% Similarity=0.106 Sum_probs=91.4
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~ 121 (270)
+|||||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+ ..++.+.+++++.+++++++ ++++|+||||
T Consensus 2 ~~PvvllHG~~~~~~-~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~-~~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~ 78 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRP-LWEQVQGFREAVVPIMAKAP-QGVHLICYSQ 78 (268)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSC-HHHHHHHHHHHHHHHHHHCT-TCEEEEEETH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCc-cccCHHHHHHHHHHHHhccC-CeEEEEcccc
Confidence 678999999999999 999999999864 99999999999999855 34678889999999999998 9999999999
Q ss_pred hHHHHHHHHhhCcc-ccccEEEecccCC
Q 024228 122 GGMVGFKMAEMYPD-LVESMVVTCSVMG 148 (270)
Q Consensus 122 Gg~~a~~~a~~~p~-~v~~~i~~~~~~~ 148 (270)
||.+|+.+|.++|+ +|+++|+++++..
T Consensus 79 GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 79 GGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred HHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99999999999998 6999999987543
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.96 E-value=7.4e-28 Score=187.59 Aligned_cols=232 Identities=15% Similarity=0.102 Sum_probs=158.3
Q ss_pred CceeEEEeecCCeEEEEEe--cCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCCh
Q 024228 20 GMTQRTIEIEPGTILNIWV--PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTA 95 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~--~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~ 95 (270)
.++...|.. +|..|..+. +...++.|+||++||+.++.. .+..+.+.|.++ |.|+++|+||+|.|..... ..+.
T Consensus 105 ~~e~v~ip~-dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e-~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~~ 182 (360)
T d2jbwa1 105 PAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDY 182 (360)
T ss_dssp CEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCH
T ss_pred CeEEeecCc-CCcccceEEEecCCCCCceEEEEeCCCCccHH-HHHHHHHHHHhcCCEEEEEccccccccCccccccccH
Confidence 456666666 788887544 333455689999999999888 787888888887 9999999999999975543 2455
Q ss_pred HHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccc
Q 024228 96 SFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (270)
Q Consensus 96 ~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (270)
+.....+.+++... +.++|+++||||||.+++.+|...| +|+++|.+++............... .........
T Consensus 183 ~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 258 (360)
T d2jbwa1 183 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLETPLTK---ESWKYVSKV 258 (360)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGSCHHHH---HHHHHHTTC
T ss_pred HHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhhhhhhh---HHHHHhccC
Confidence 65666666666654 3468999999999999999999887 5999999988765432111100000 000000011
Q ss_pred ccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhH
Q 024228 173 KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~ 251 (270)
............. ......+.++.+|+|+++|++|. +|.+.++.+.+.++ .+.+++++++++|.. .+.+...
T Consensus 259 ~~~~~~~~~~~~~-----~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~ 331 (360)
T d2jbwa1 259 DTLEEARLHVHAA-----LETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRP 331 (360)
T ss_dssp SSHHHHHHHHHHH-----TCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHH
T ss_pred CchHHHHHHHHhh-----cchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHH
Confidence 1111111111111 11223456667999999999998 58999999999886 345778889999965 4667778
Q ss_pred HHHHHHHHHhhhh
Q 024228 252 NRQLKTILASLVH 264 (270)
Q Consensus 252 ~~~i~~fl~~~~~ 264 (270)
...|.+||.+...
T Consensus 332 ~~~i~dWl~~~L~ 344 (360)
T d2jbwa1 332 RLEMADWLYDVLV 344 (360)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 8889999988754
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.95 E-value=4.7e-27 Score=168.72 Aligned_cols=196 Identities=15% Similarity=0.179 Sum_probs=140.8
Q ss_pred eeEEEeecCCe-EEEEEecCCC--CCCceEEEeCCC---CCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCC
Q 024228 22 TQRTIEIEPGT-ILNIWVPKKT--TKKHAVVLLHPF---GFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 22 ~~~~i~~~~g~-~l~~~~~~~~--~~~~~vv~~hG~---~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~ 93 (270)
+..+|+.++|. ...+..+.+. .+.+++|++|+. +++.. ..+..+++.|++. |.|+.+|+||+|.|......
T Consensus 9 ~~l~i~gp~G~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~- 87 (218)
T d2fuka1 9 AALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDH- 87 (218)
T ss_dssp EEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCT-
T ss_pred eEEEEeCCCccEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCc-
Confidence 34456666672 3344444332 233456888843 33333 1356788999988 99999999999999875433
Q ss_pred ChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhh
Q 024228 94 TASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDF 169 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (270)
.....+|+.++++.+ +.++++++||||||.+++.+|.+. +++++|+++|+..... +
T Consensus 88 -~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~~-----------~------ 147 (218)
T d2fuka1 88 -GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD-----------F------ 147 (218)
T ss_dssp -TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-----------C------
T ss_pred -CcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccchh-----------h------
Confidence 345566766665544 567899999999999999988874 4889999987643110 0
Q ss_pred cccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchH
Q 024228 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 249 (270)
. .....+|+|+|+|++|.++|++.++++.+.++...++++++|++|++. .+.+
T Consensus 148 ------------------~--------~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~f~-~~~~ 200 (218)
T d2fuka1 148 ------------------S--------DVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFH-RKLI 200 (218)
T ss_dssp ------------------T--------TCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTTCT-TCHH
T ss_pred ------------------h--------ccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCCCC-CCHH
Confidence 0 001127999999999999999999999888776789999999999764 4446
Q ss_pred hHHHHHHHHHHhhhhh
Q 024228 250 VYNRQLKTILASLVHA 265 (270)
Q Consensus 250 ~~~~~i~~fl~~~~~~ 265 (270)
++.+.+.+|+++....
T Consensus 201 ~l~~~~~~~v~~~l~~ 216 (218)
T d2fuka1 201 DLRGALQHGVRRWLPA 216 (218)
T ss_dssp HHHHHHHHHHGGGCSS
T ss_pred HHHHHHHHHHHHhcCC
Confidence 6899999999877543
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.95 E-value=8.6e-26 Score=173.48 Aligned_cols=232 Identities=13% Similarity=0.023 Sum_probs=147.1
Q ss_pred eEEEeecCCeEEEEE--ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCC-----
Q 024228 23 QRTIEIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT----- 94 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~----- 94 (270)
..+++..||.+|+.+ .+....+.|+||++||++++.. .|...+..|+++ |.|+++|+||+|.|........
T Consensus 58 ~v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~-~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~ 136 (318)
T d1l7aa_ 58 RLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYD-GEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALG 136 (318)
T ss_dssp EEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSG-GGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSS
T ss_pred EEEEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCcc-chHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhc
Confidence 334555689888654 4455456789999999999998 899999999888 9999999999999976542211
Q ss_pred -------------hHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh
Q 024228 95 -------------ASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN 155 (270)
Q Consensus 95 -------------~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~ 155 (270)
......|....++.+ +..++.++|+|+||..++..+...+. +.+++...+..........
T Consensus 137 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 215 (318)
T d1l7aa_ 137 WMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERAID 215 (318)
T ss_dssp STTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHHHH
T ss_pred chhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccccHHHHhh
Confidence 112233443333332 23468999999999999999999875 7777766654332111110
Q ss_pred HhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEE
Q 024228 156 AALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
..........................+... ..........++.+|+|+++|++|.++|++.+..+++.++.+.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~ 292 (318)
T d1l7aa_ 216 VALEQPYLEINSFFRRNGSPETEVQAMKTL---SYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKV 292 (318)
T ss_dssp HCCSTTTTHHHHHHHHSCCHHHHHHHHHHH---HTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEE
T ss_pred cccccccchhhhhhhccccccccccccccc---cccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEE
Confidence 000000000000000000111111111110 01223334556669999999999999999999999999986789999
Q ss_pred ecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 236 IEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 236 ~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++++||... +++.+.+.+||+++.
T Consensus 293 ~~~~gH~~~----~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 293 YRYFGHEYI----PAFQTEKLAFFKQIL 316 (318)
T ss_dssp ETTCCSSCC----HHHHHHHHHHHHHHH
T ss_pred ECCCCCCCc----HHHHHHHHHHHHHhC
Confidence 999999764 345566666776654
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.95 E-value=5.1e-26 Score=161.43 Aligned_cols=178 Identities=11% Similarity=0.128 Sum_probs=125.4
Q ss_pred ceEEEeCCCCCccccc-HHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 46 HAVVLLHPFGFDGILT-WQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~-~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
+.||++||++++.... +..+++.|++. |.|+++|+||+|.+. .+++.+.+...++.. .++++|+||||||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~-------~~~~~~~l~~~~~~~-~~~~~lvGhS~Gg 73 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR-------LEDWLDTLSLYQHTL-HENTYLVAHSLGC 73 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC-------HHHHHHHHHTTGGGC-CTTEEEEEETTHH
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch-------HHHHHHHHHHHHhcc-CCCcEEEEechhh
Confidence 5799999999987622 67788889888 999999999998653 666666666655544 3689999999999
Q ss_pred HHHHHHHhhCcccccc--EEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh
Q 024228 124 MVGFKMAEMYPDLVES--MVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL 201 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (270)
.+++.++.++|+.... ++..++........ ..... +..............
T Consensus 74 ~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~--------------------------~~~~~~~~~~~~~~~ 125 (186)
T d1uxoa_ 74 PAILRFLEHLQLRAALGGIILVSGFAKSLPTL--QMLDE--------------------------FTQGSFDHQKIIESA 125 (186)
T ss_dssp HHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC--GGGGG--------------------------GTCSCCCHHHHHHHE
T ss_pred HHHHHHHHhCCccceeeEEeecccccccchhh--hhhhh--------------------------hhcccccccccccCC
Confidence 9999999999875433 33333322211100 00000 000011112222344
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc---hHhHHHHHHHHHHh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER---PFVYNRQLKTILAS 261 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 261 (270)
+|+++++|++|+++|++.++.+++.+ ++++++++++||+...+. -.++.+.|.+||.+
T Consensus 126 ~p~lvi~g~~D~~vp~~~~~~l~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 126 KHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp EEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHc--CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 89999999999999999999999887 689999999999775432 24588889999864
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.95 E-value=3e-27 Score=178.31 Aligned_cols=214 Identities=10% Similarity=0.017 Sum_probs=146.1
Q ss_pred CCCceEEEeCCC--CCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC---CChHHHHHHHHH-HHHHhCCCceEE
Q 024228 43 TKKHAVVLLHPF--GFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD---RTASFQAECMAK-GLRKLGVEKCTL 116 (270)
Q Consensus 43 ~~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~-~l~~~~~~~~~l 116 (270)
.++|+++|+||+ +++.. .|..+++.|...+.|+++|+||||.++..... .+.+.+++++.+ +++..+..+++|
T Consensus 58 ~~~~~l~c~~~~~~~g~~~-~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P~vL 136 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPH-EFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVL 136 (283)
T ss_dssp CCCCEEEEECCCCTTCSTT-TTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCCceEEEeCCCCCCCCHH-HHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCCceEE
Confidence 567899999985 45666 89999999998899999999999998765433 588888888765 556778889999
Q ss_pred EEEchhHHHHHHHHhhC----ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCC
Q 024228 117 VGVSYGGMVGFKMAEMY----PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL 192 (270)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~----p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (270)
+||||||.+|+.+|.+. ++++.+++++++................................+............+.
T Consensus 137 ~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~ 216 (283)
T d2h7xa1 137 LGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARFLAGPR 216 (283)
T ss_dssp EEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHSCC
T ss_pred EEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHHHHHHHhhcc
Confidence 99999999999999875 35799999999876544332222111111111111111111111111111100000110
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHHHHhh
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTILASL 262 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 262 (270)
...+.+|+++++|++|..++.+....+.+..+...+++.++| +|+.++ ++++.+++.|.+||++.
T Consensus 217 ----~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 217 ----PGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp ----CCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred ----ccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHHHHHHhc
Confidence 123449999999999999988777777666664578999996 898665 67899999999999875
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=7.8e-26 Score=166.75 Aligned_cols=214 Identities=13% Similarity=-0.012 Sum_probs=139.9
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh----
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA---- 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~---- 95 (270)
++.+.+++ .|..+.+..+++ ++|+||++||++++.. .|..+++.|++. |.|+++|+||||.|.........
T Consensus 3 ~~~~~~~l-~g~~~~~~~p~~--~~~~vl~lHG~~~~~~-~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~ 78 (238)
T d1ufoa_ 3 VRTERLTL-AGLSVLARIPEA--PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYV 78 (238)
T ss_dssp EEEEEEEE-TTEEEEEEEESS--CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHH
T ss_pred EEEEEEEE-CCEEEEecCCCC--CCeEEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhh
Confidence 56677788 588888877765 5799999999999998 999999999887 99999999999999865543221
Q ss_pred HHHH-------HHHHHHHH---HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchh
Q 024228 96 SFQA-------ECMAKGLR---KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES 165 (270)
Q Consensus 96 ~~~~-------~~~~~~l~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 165 (270)
.... +++..++. ..+..++.++|+|+||.+++.++..+|+ +++++.+.+..........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~~~~---------- 147 (238)
T d1ufoa_ 79 EEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLPQG---------- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCCTT----------
T ss_pred hhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeeccccccccc----------
Confidence 1111 12222222 2245789999999999999999999886 6666655443322111000
Q ss_pred hhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-----CCceEEEecCCC
Q 024228 166 WVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-----QNATMESIEKAG 240 (270)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g 240 (270)
............... ..........+|+|+++|++|.++|.+.+..+.+.+. .+.++++++|+|
T Consensus 148 -----~~~~~~~~~~~~~~~------~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~g 216 (238)
T d1ufoa_ 148 -----QVVEDPGVLALYQAP------PATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAG 216 (238)
T ss_dssp -----CCCCCHHHHHHHHSC------GGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCC
T ss_pred -----cccccccccchhhhh------hhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCC
Confidence 000000111111100 0011112223799999999999999999999998874 245788899999
Q ss_pred cceeecchHhHHHHHHHHHH
Q 024228 241 HLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~ 260 (270)
|...-+..+...+.+.+||+
T Consensus 217 H~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 217 HTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp SSCCHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHHhc
Confidence 98754444444444555543
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.93 E-value=2.6e-25 Score=166.00 Aligned_cols=233 Identities=20% Similarity=0.235 Sum_probs=153.6
Q ss_pred cCCceeEEEeecCCeEEEEEe--cCC-CCCCceEEEeCCCCC--cccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC
Q 024228 18 LVGMTQRTIEIEPGTILNIWV--PKK-TTKKHAVVLLHPFGF--DGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP 91 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~--~~~-~~~~~~vv~~hG~~~--~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~ 91 (270)
+...+..++++.||.+|..+. +.. +.+.|+||++||++. ... .|...+..|+++ |.|+++|+||++.+.....
T Consensus 9 ~~~~~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~-~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~ 87 (260)
T d2hu7a2 9 IAGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSD-SWDTFAASLAAAGFHVVMPNYRGSTGYGEEWR 87 (260)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCS-SCCHHHHHHHHHTCEEEEECCTTCSSSCHHHH
T ss_pred cCceEEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCc-cccHHHHHHHhhccccccceeeeccccccccc
Confidence 445667778888999986543 333 234578999998543 333 677778888887 9999999999876643211
Q ss_pred C----CChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 92 D----RTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 92 ~----~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
. .......+|+.+.++.+ ...++.++|+|+||..++.++..+|+.+++++..++......... ......
T Consensus 88 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~---~~~~~~ 164 (260)
T d2hu7a2 88 LKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYE---LSDAAF 164 (260)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHHH---TCCHHH
T ss_pred cccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhhhc---cccccc
Confidence 1 11122344554444433 446899999999999999999999999999998887654321110 000000
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCC
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAG 240 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~g 240 (270)
..............+. ...+...+.++.+|+|+++|++|..+|.+.+..+.+.+. ..+++++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~ 234 (260)
T d2hu7a2 165 RNFIEQLTGGSREIMR----------SRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAG 234 (260)
T ss_dssp HHHHHHHHCSCHHHHH----------HTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred cccccccccccccccc----------ccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCC
Confidence 0000000111111111 111223345566899999999999999999999988764 356899999999
Q ss_pred cceee-cchHhHHHHHHHHHHhhhh
Q 024228 241 HLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 241 H~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
|.+.. ++...+.+.+.+||+++..
T Consensus 235 H~~~~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 235 HAINTMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp SSCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChHhHHHHHHHHHHHHHHHhc
Confidence 98754 6667788889999998764
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=3.5e-25 Score=155.61 Aligned_cols=171 Identities=18% Similarity=0.128 Sum_probs=134.0
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
++||||+||++++.. .|..+++.|.++ |.++.+|.+|++.+.... ..+.+.+.+++.+++++++.++++++||||||
T Consensus 2 ~~PVv~vHG~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG 79 (179)
T d1ispa_ 2 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN-YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGG 79 (179)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCH-HHHHHHHHHHHHHHHHHHCCSCEEEEEETHHH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHHcCCeEEEEecCCcccccccc-chhhhhHHHHHHHHHHhcCCceEEEEeecCcC
Confidence 567999999999999 999999999988 999999999998876432 24556677788888888899999999999999
Q ss_pred HHHHHHHhhC--ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh
Q 024228 124 MVGFKMAEMY--PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL 201 (270)
Q Consensus 124 ~~a~~~a~~~--p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (270)
.++..++.++ |++|+++|+++++....... . .+. . .....
T Consensus 80 ~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~------~----------l~~----------------~------~~~~~ 121 (179)
T d1ispa_ 80 ANTLYYIKNLDGGNKVANVVTLGGANRLTTGK------A----------LPG----------------T------DPNQK 121 (179)
T ss_dssp HHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB------C----------CCC----------------S------CTTCC
T ss_pred HHHHHHHHHcCCchhhCEEEEECCCCCCchhh------h----------cCC----------------c------ccccC
Confidence 9999999887 67899999998753321100 0 000 0 00111
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+|++.++|+.|.++++..+ .++ ..+.+.+++.+|.....+| ++.+.|.+||+.-
T Consensus 122 ~~~~~i~~~~D~~v~~~~~-----~l~-~~~~~~~~~~~H~~l~~~~-~v~~~i~~~L~~~ 175 (179)
T d1ispa_ 122 ILYTSIYSSADMIVMNYLS-----RLD-GARNVQIHGVGHIGLLYSS-QVNSLIKEGLNGG 175 (179)
T ss_dssp CEEEEEEETTCSSSCHHHH-----CCB-TSEEEEESSCCTGGGGGCH-HHHHHHHHHHTTT
T ss_pred ceEEEEEecCCcccCchhh-----cCC-CceEEEECCCCchhhccCH-HHHHHHHHHHhcc
Confidence 7999999999999998653 355 7888999999999888887 4789999999643
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2e-25 Score=168.13 Aligned_cols=106 Identities=15% Similarity=0.112 Sum_probs=81.2
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHH-HHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG-LRK 108 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~-l~~ 108 (270)
+|..+.+..... +++++|||+||++++.. .|..+++.| .++|+++|+||+|.|+ +.+++++++.+. .+.
T Consensus 11 ~~~~l~~l~~~~-~~~~Pl~l~Hg~~gs~~-~~~~l~~~L--~~~v~~~d~~g~~~~~------~~~~~a~~~~~~~~~~ 80 (286)
T d1xkta_ 11 EGPTLMRLNSVQ-SSERPLFLVHPIEGSTT-VFHSLASRL--SIPTYGLQCTRAAPLD------SIHSLAAYYIDCIRQV 80 (286)
T ss_dssp TSCSEEECCCCC-CCSCCEEEECCTTCCCG-GGHHHHHTC--SSCEEEECCCTTSCCS------CHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCC-CCCCeEEEECCCCccHH-HHHHHHHHc--CCeEEEEeCCCCCCCC------CHHHHHHHHHHHHHHh
Confidence 565565554444 45677999999999999 999999888 4889999999999875 567777776554 445
Q ss_pred hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
.+.++++|+||||||.+|+.+|.++|+++.++++++.
T Consensus 81 ~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 81 QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp CCSSCCEEEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred cCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 5678999999999999999999999999888776554
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=5.7e-25 Score=161.15 Aligned_cols=201 Identities=16% Similarity=0.065 Sum_probs=124.2
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-CCCceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-GVEKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~l~G~S~G 122 (270)
++++|||+||++++.. .|..+++.|. .|.|+++|++|+|. .++++.+.|+++ +.++++|+|||||
T Consensus 16 ~~~~l~~lhg~~g~~~-~~~~la~~L~-~~~v~~~~~~g~~~------------~a~~~~~~i~~~~~~~~~~lvGhS~G 81 (230)
T d1jmkc_ 16 QEQIIFAFPPVLGYGL-MYQNLSSRLP-SYKLCAFDFIEEED------------RLDRYADLIQKLQPEGPLTLFGYSAG 81 (230)
T ss_dssp CSEEEEEECCTTCCGG-GGHHHHHHCT-TEEEEEECCCCSTT------------HHHHHHHHHHHHCCSSCEEEEEETHH
T ss_pred CCCeEEEEcCCCCCHH-HHHHHHHHCC-CCEEeccCcCCHHH------------HHHHHHHHHHHhCCCCcEEEEeeccC
Confidence 4789999999999999 9999999995 49999999998863 345555555555 4578999999999
Q ss_pred HHHHHHHHhhCccccccEE---EecccCCCCchhhhHhhhhccchhhhhh------c-ccccHHHHHHHHHhhhhcCCCC
Q 024228 123 GMVGFKMAEMYPDLVESMV---VTCSVMGLTESVSNAALERIGYESWVDF------L-LPKTADALKVQFDIACYKLPTL 192 (270)
Q Consensus 123 g~~a~~~a~~~p~~v~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~ 192 (270)
|.+|+.+|.+.|+++..++ .+.+........................ . .......+.......... ..
T Consensus 82 G~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 159 (230)
T d1jmkc_ 82 CSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSY--YV 159 (230)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSGGGSHHHHHHHHHHHHHHHHH--HH
T ss_pred hHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhccccccccccHHHHHHHHHHHHHHHHh--hh
Confidence 9999999998877655544 4333322111110000000000000000 0 000001111111000000 00
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch--HhHHHHHHHHHHhh
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP--FVYNRQLKTILASL 262 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~~~ 262 (270)
.......+.+|+++++|++|..++.. ...+.+....+.+++++++ +|+.++++| +++++.|.+||++.
T Consensus 160 ~~~~~~~i~~p~l~i~g~~D~~~~~~-~~~w~~~~~~~~~~~~i~g-~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 160 NLISTGQVKADIDLLTSGADFDIPEW-LASWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp HCCCCSCBSSEEEEEECSSCCCCCTT-EECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred cccccccccCcceeeeecCCcccchh-HHHHHHhccCCcEEEEEcC-CChhhcCCccHHHHHHHHHHHHhhc
Confidence 00112234489999999999998854 3334455545778899985 999988766 88999999999753
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.90 E-value=3.9e-22 Score=153.50 Aligned_cols=237 Identities=15% Similarity=0.174 Sum_probs=159.6
Q ss_pred EEEeecCC-----eEEEEEecCCC--CCCceEEEeCCCCCccc--ccHHHHH---HHhhcc-ceEEeecCCCCCCCCCCC
Q 024228 24 RTIEIEPG-----TILNIWVPKKT--TKKHAVVLLHPFGFDGI--LTWQFQV---LALAKT-YEVYVPDFLFFGSSVTDR 90 (270)
Q Consensus 24 ~~i~~~~g-----~~l~~~~~~~~--~~~~~vv~~hG~~~~~~--~~~~~~~---~~l~~~-~~v~~~d~~g~G~s~~~~ 90 (270)
..+++..| .+|.|...|.- ...++||+.|++.+++. ..|..++ +.|... |-|||+|..|.|.++..+
T Consensus 16 ~~F~le~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p 95 (376)
T d2vata1 16 SLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGP 95 (376)
T ss_dssp EEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSST
T ss_pred CcEEeCCCCCcCCceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCC
Confidence 34555555 45678888753 45678999999998876 3445543 345445 999999999987643221
Q ss_pred -----------------CCCChHHHHHHHHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch
Q 024228 91 -----------------PDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES 152 (270)
Q Consensus 91 -----------------~~~~~~~~~~~~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~ 152 (270)
+..++.+++..-..++++++++++ .++|.||||+.|+.+|..+|++|+++|.+++.......
T Consensus 96 ~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~ 175 (376)
T d2vata1 96 CSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGW 175 (376)
T ss_dssp TSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHH
T ss_pred CCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchH
Confidence 125778888888899999999997 57899999999999999999999999999887654321
Q ss_pred hhh-------Hh--------------------hh---hcc------chhhhhhcccc-----------------------
Q 024228 153 VSN-------AA--------------------LE---RIG------YESWVDFLLPK----------------------- 173 (270)
Q Consensus 153 ~~~-------~~--------------------~~---~~~------~~~~~~~~~~~----------------------- 173 (270)
... .. +. ... ...+...+...
T Consensus 176 ~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~ 255 (376)
T d2vata1 176 CAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDS 255 (376)
T ss_dssp HHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-------------------
T ss_pred HHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhccccccc
Confidence 100 00 00 000 00000000000
Q ss_pred --------cHHHHHHHHH--------------------hhh-h--cC--CCChhhhhhhhheeeeEEEcCCCccCCHHHH
Q 024228 174 --------TADALKVQFD--------------------IAC-Y--KL--PTLPAFVYKHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 174 --------~~~~~~~~~~--------------------~~~-~--~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
.......++. ... . .. .......+..+.+|+|+|.++.|.++|++..
T Consensus 256 ~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~ 335 (376)
T d2vata1 256 GNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEH 335 (376)
T ss_dssp --------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHH
T ss_pred ccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHH
Confidence 0000111100 000 0 00 1112344666779999999999999999999
Q ss_pred HHHHHHhcCCceEEEec-CCCcceeecchHhHHHHHHHHHHh
Q 024228 221 RNLKEQVGQNATMESIE-KAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 221 ~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
+++++.++ ++++++++ ..||..++..++.+.+.|.+||++
T Consensus 336 ~e~a~~l~-~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 336 VEMGRSIP-NSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHHHHST-TEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHhcC-CCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 99999998 99999998 569988887889999999999974
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.90 E-value=2.8e-22 Score=154.06 Aligned_cols=227 Identities=11% Similarity=0.014 Sum_probs=137.5
Q ss_pred EEeecCCeEEEEEe--cCC-CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC---------
Q 024228 25 TIEIEPGTILNIWV--PKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD--------- 92 (270)
Q Consensus 25 ~i~~~~g~~l~~~~--~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~--------- 92 (270)
.++..||.+++.+. +.. .++.|+||++||++.+.. .+.......++.|.|+++|+||+|.|......
T Consensus 59 ~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~-~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~ 137 (322)
T d1vlqa_ 59 TFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVD 137 (322)
T ss_dssp EEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBC
T ss_pred EEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcC-cHHHHHHHHhCCCEEEEeeccccCCCCCCcccccccccccc
Confidence 34455899987543 432 244579999999988777 66554444444499999999999998654211
Q ss_pred ----------------CChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 93 ----------------RTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 93 ----------------~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
........|....++.+ +..++.++|+|+||.+++.++...+ ++++++...+.....
T Consensus 138 ~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~ 216 (322)
T d1vlqa_ 138 PQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHF 216 (322)
T ss_dssp CCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCH
T ss_pred ccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCccccH
Confidence 01112234555555443 2347999999999999998888776 589888776654322
Q ss_pred chhhhHhhhhccchhhhhh--cccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 151 ESVSNAALERIGYESWVDF--LLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
...... ............ .............. ...+.....++.+|+|+++|++|.++|++.+..+.+.++
T Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~ 289 (322)
T d1vlqa_ 217 RRAVQL-VDTHPYAEITNFLKTHRDKEEIVFRTLS------YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYA 289 (322)
T ss_dssp HHHHHH-CCCTTHHHHHHHHHHCTTCHHHHHHHHH------TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCC
T ss_pred HHHHhh-ccccchhhHHhhhhcCcchhhhHHHHhh------hhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCC
Confidence 111100 000000000000 00111111111110 112333455566999999999999999999999999987
Q ss_pred CCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 229 QNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 229 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
..++++++++++|....+ .-.+...+||++..
T Consensus 290 ~~~~l~~~p~~~H~~~~~---~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 290 GPKEIRIYPYNNHEGGGS---FQAVEQVKFLKKLF 321 (322)
T ss_dssp SSEEEEEETTCCTTTTHH---HHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCCccc---cCHHHHHHHHHHHh
Confidence 678999999999954221 12233456776653
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.89 E-value=9.7e-22 Score=140.90 Aligned_cols=180 Identities=14% Similarity=0.091 Sum_probs=127.9
Q ss_pred EEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC------CCCChHHH---HHHHHHH
Q 024228 35 NIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR------PDRTASFQ---AECMAKG 105 (270)
Q Consensus 35 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~------~~~~~~~~---~~~~~~~ 105 (270)
+++.++..+++|+||++||++++.. .|..+++.+.+++.|++++.+..+...... ...+.++. .+++..+
T Consensus 4 ~i~~~~~~~~~P~vi~lHG~g~~~~-~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (202)
T d2h1ia1 4 HVFQKGKDTSKPVLLLLHGTGGNEL-DLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEF 82 (202)
T ss_dssp EEEECCSCTTSCEEEEECCTTCCTT-TTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCCEEEEECCCCCCHH-HHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHH
Confidence 3455666677899999999999998 999999999988999998765433221111 11222222 2233333
Q ss_pred ----HHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHH
Q 024228 106 ----LRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALK 179 (270)
Q Consensus 106 ----l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (270)
.+..+ ..+++++|+|+||.+++.++..+|+++.+++.+++..+......
T Consensus 83 i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 137 (202)
T d2h1ia1 83 LDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQL------------------------- 137 (202)
T ss_dssp HHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSCCC-------------------------
T ss_pred HHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcccccc-------------------------
Confidence 33333 55899999999999999999999999999999887654211000
Q ss_pred HHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCcceeecchHhHHHHHH
Q 024228 180 VQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGHLVNLERPFVYNRQLK 256 (270)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~ 256 (270)
......|+++++|++|+++|++.++++.+.+.. +.+++.+++ ||... .+..+.+.
T Consensus 138 -----------------~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~----~~~~~~~~ 195 (202)
T d2h1ia1 138 -----------------ANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLT----MGEVEKAK 195 (202)
T ss_dssp -----------------CCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCC----HHHHHHHH
T ss_pred -----------------cccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC----HHHHHHHH
Confidence 000117899999999999999999999888762 468888986 89653 34467789
Q ss_pred HHHHhh
Q 024228 257 TILASL 262 (270)
Q Consensus 257 ~fl~~~ 262 (270)
+||++.
T Consensus 196 ~wl~k~ 201 (202)
T d2h1ia1 196 EWYDKA 201 (202)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999764
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=4.7e-23 Score=132.82 Aligned_cols=100 Identities=16% Similarity=0.102 Sum_probs=86.5
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
..++++ +|.+++|...|+ +|+||++||.+ . .| .+.|+++|+|+++|+||||.|+.+ ..+.+++++++
T Consensus 3 ~~~~~~-~G~~l~y~~~G~---G~pvlllHG~~---~-~w---~~~L~~~yrvi~~DlpG~G~S~~p--~~s~~~~a~~i 69 (122)
T d2dsta1 3 AGYLHL-YGLNLVFDRVGK---GPPVLLVAEEA---S-RW---PEALPEGYAFYLLDLPGYGRTEGP--RMAPEELAHFV 69 (122)
T ss_dssp EEEEEE-TTEEEEEEEECC---SSEEEEESSSG---G-GC---CSCCCTTSEEEEECCTTSTTCCCC--CCCHHHHHHHH
T ss_pred ceEEEE-CCEEEEEEEEcC---CCcEEEEeccc---c-cc---cccccCCeEEEEEeccccCCCCCc--ccccchhHHHH
Confidence 457788 799999999996 89999999843 3 44 345777799999999999999854 57899999999
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhCcc
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD 135 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 135 (270)
.+++++++.++++++||||||.+++.+++..+.
T Consensus 70 ~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 70 AGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 999999999999999999999999999987543
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=9.5e-22 Score=146.36 Aligned_cols=228 Identities=12% Similarity=0.029 Sum_probs=138.6
Q ss_pred eeEEEeecCCeEEEEEecCCC-----CCCceEEEeCCCCCcc--c--ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-
Q 024228 22 TQRTIEIEPGTILNIWVPKKT-----TKKHAVVLLHPFGFDG--I--LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR- 90 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~~--~--~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~- 90 (270)
+...+...||.+++|+..-++ ++-|+||++||+++.. . ..+......++++ |.|+.+|+||++......
T Consensus 4 ~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~ 83 (258)
T d2bgra2 4 KKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIM 83 (258)
T ss_dssp EEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHH
T ss_pred eeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHH
Confidence 344455559999998654322 2237999999952211 1 1222334456666 999999999987543211
Q ss_pred --CC-CChHHHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc
Q 024228 91 --PD-RTASFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161 (270)
Q Consensus 91 --~~-~~~~~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~ 161 (270)
.. .-.....+++.++++.+. .+++.++|+|+||.+++.++...|+.+...+..++................
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (258)
T d2bgra2 84 HAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYM 163 (258)
T ss_dssp GGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHHHHHH
T ss_pred HhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccccccchhc
Confidence 00 111122445555555542 246999999999999999999999877777666654432211111111000
Q ss_pred cchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEec
Q 024228 162 GYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL-EKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIE 237 (270)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~ 237 (270)
. .+............ .+.....++. +|+++++|++|..+|+..+.++.+.+. .++++++++
T Consensus 164 ~--------~~~~~~~~~~~~~~-------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~ 228 (258)
T d2bgra2 164 G--------LPTPEDNLDHYRNS-------TVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYT 228 (258)
T ss_dssp C--------CCSTTTTHHHHHHS-------CSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEET
T ss_pred c--------cccchhhHHHhhcc-------cccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 0 00000000110000 0111122222 799999999999999999888887764 468999999
Q ss_pred CCCcceee-cchHhHHHHHHHHHHhhhh
Q 024228 238 KAGHLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 238 ~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
+++|.+.. +....+.+.+.+||+++.+
T Consensus 229 g~~H~~~~~~~~~~~~~~i~~fl~~~l~ 256 (258)
T d2bgra2 229 DEDHGIASSTAHQHIYTHMSHFIKQCFS 256 (258)
T ss_dssp TCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHHhc
Confidence 99998644 5567788999999998864
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=7.7e-22 Score=143.94 Aligned_cols=184 Identities=16% Similarity=0.165 Sum_probs=123.7
Q ss_pred cCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCC---------CC-----CC-CCCCCC---hHHHH
Q 024228 39 PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFG---------SS-----VT-DRPDRT---ASFQA 99 (270)
Q Consensus 39 ~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G---------~s-----~~-~~~~~~---~~~~~ 99 (270)
+...+..++||++||+|++.. .|..+...+... +.+++++-|.+. .+ .. .....+ .+...
T Consensus 15 p~~~~~~~~VI~lHG~G~~~~-~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~ 93 (229)
T d1fj2a_ 15 PAARKATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAA 93 (229)
T ss_dssp CCSSCCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHH
T ss_pred CCCCCCCCEEEEEcCCCCCHH-HHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHH
Confidence 333345678999999999988 888888777666 889988754321 00 00 001112 22333
Q ss_pred HHHHHHHHH-----hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccccc
Q 024228 100 ECMAKGLRK-----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (270)
Q Consensus 100 ~~~~~~l~~-----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (270)
+.+..+++. ++.++++++|+|+||.+|+.++.++|+++.+++.+++............ .
T Consensus 94 ~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~~~~~-------------~--- 157 (229)
T d1fj2a_ 94 ENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGP-------------I--- 157 (229)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSCSSC-------------C---
T ss_pred HHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccccccc-------------c---
Confidence 444444443 2456899999999999999999999999999999987543221110000 0
Q ss_pred HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-----CCceEEEecCCCcceeecchH
Q 024228 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-----QNATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~ 249 (270)
. .....+|++++||++|.++|.+.++...+.+. .+++++++++.||... ++
T Consensus 158 -------------~--------~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~---~~ 213 (229)
T d1fj2a_ 158 -------------G--------GANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQ 213 (229)
T ss_dssp -------------C--------STTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HH
T ss_pred -------------c--------cccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC---HH
Confidence 0 00011799999999999999998887766653 2568889999999763 23
Q ss_pred hHHHHHHHHHHhhhh
Q 024228 250 VYNRQLKTILASLVH 264 (270)
Q Consensus 250 ~~~~~i~~fl~~~~~ 264 (270)
..+.+.+||+++..
T Consensus 214 -~~~~~~~wL~~~Lp 227 (229)
T d1fj2a_ 214 -EMMDVKQFIDKLLP 227 (229)
T ss_dssp -HHHHHHHHHHHHSC
T ss_pred -HHHHHHHHHHhHCc
Confidence 34678899988753
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.89 E-value=7.6e-23 Score=151.62 Aligned_cols=204 Identities=11% Similarity=-0.018 Sum_probs=135.0
Q ss_pred CCCceEEEeCCC--CCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-hCCCceEEEEE
Q 024228 43 TKKHAVVLLHPF--GFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK-LGVEKCTLVGV 119 (270)
Q Consensus 43 ~~~~~vv~~hG~--~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~G~ 119 (270)
+.+|+++|+||+ +++.. .|..+++.|...+.|+++|+||+|.++.. ..+++.+++++.+.|.. .+..+++|+||
T Consensus 40 ~~~~~l~c~~~~~~gg~~~-~y~~La~~L~~~~~V~al~~pG~~~~e~~--~~s~~~~a~~~~~~i~~~~~~~P~~L~Gh 116 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPH-EFTRLAGALRGIAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQGDKPFVVAGH 116 (255)
T ss_dssp SCSSEEEEECCCSSSCSGG-GGHHHHHHHTTTCCEEEECCTTSSTTCCE--ESSHHHHHHHHHHHHHHTTSSSCEEEEEC
T ss_pred CCCCeEEEECCCCCCCCHH-HHHHHHHhcCCCceEEEEeCCCcCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 357899999984 56666 99999999998899999999999987543 35799999988776654 56678999999
Q ss_pred chhHHHHHHHHhhCc---cccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHH---HHHHHHhh-hhcCCCC
Q 024228 120 SYGGMVGFKMAEMYP---DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA---LKVQFDIA-CYKLPTL 192 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~ 192 (270)
||||.+|+.+|.+.+ .++.+++++++..+............................. +...+... .+.
T Consensus 117 S~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~---- 192 (255)
T d1mo2a_ 117 SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQWR---- 192 (255)
T ss_dssp STTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHHHHHTTCC----CCCCHHHHHHHHHHHHHHHHCC----
T ss_pred CCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHHHHHHHhhccccccCCHHHHHHHHHHHHHHhcCC----
Confidence 999999999998754 4599999999876543332222221111111101111111111 11111111 111
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHHHH
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTILA 260 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 260 (270)
...+.+|++++.+++|...... ..+........+++.++| +|+.++ ++++.+++.|.+||.
T Consensus 193 ----~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 193 ----PRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp ----CCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEECCS-CCSSCSSCCHHHHHHHHHHHHT
T ss_pred ----CccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEECC-CCcccccccHHHHHHHHHHHhC
Confidence 1223489999999887654322 223333334678999996 898655 678999999999985
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.89 E-value=1.3e-21 Score=145.34 Aligned_cols=166 Identities=12% Similarity=0.090 Sum_probs=126.2
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----------CCC
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----------GVE 112 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----------~~~ 112 (270)
+.|.||++||++++.. .+..+++.|+++ |.|+++|++|++... .....|+.+.++.+ +.+
T Consensus 51 ~~P~Vv~~HG~~g~~~-~~~~~a~~lA~~Gy~V~~~d~~~~~~~~--------~~~~~d~~~~~~~l~~~~~~~~~vD~~ 121 (260)
T d1jfra_ 51 TFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSALDYLTQRSSVRTRVDAT 121 (260)
T ss_dssp CEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHHHHHHHHTSTTGGGEEEE
T ss_pred CccEEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeeCCCcCCc--------hhhHHHHHHHHHHHHhhhhhhcccccc
Confidence 3479999999999998 888999999999 999999999876542 33344444444332 345
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL 192 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (270)
++.++|||+||..++.++...+ +++++|.+++......
T Consensus 122 rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~~~----------------------------------------- 159 (260)
T d1jfra_ 122 RLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDKT----------------------------------------- 159 (260)
T ss_dssp EEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSCCC-----------------------------------------
T ss_pred ceEEEeccccchHHHHHHhhhc-cchhheeeeccccccc-----------------------------------------
Confidence 8999999999999999998876 5888888877543210
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHH-HHHHHHHhc--CCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQV-ARNLKEQVG--QNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
..+..+|+|+++|++|.++|++. .+.+.+.++ ...++++++|++|.........+.+.+..||+....
T Consensus 160 ----~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~ 230 (260)
T d1jfra_ 160 ----WPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFID 230 (260)
T ss_dssp ----CTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred ----ccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhc
Confidence 11223899999999999999865 555566554 245789999999988766667788888899987654
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.88 E-value=1.7e-20 Score=135.53 Aligned_cols=196 Identities=15% Similarity=0.151 Sum_probs=139.6
Q ss_pred EEEeecCCeEEEEEec-CCCCCCceEEEeCCC---CCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 24 RTIEIEPGTILNIWVP-KKTTKKHAVVLLHPF---GFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~-~~~~~~~~vv~~hG~---~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
..|+.++| +|..+.. ....+.+++|++||. +++.. .....+++.|.+. |.++.+|+||.|.|....... ..
T Consensus 3 v~i~g~~G-~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~--~~ 79 (218)
T d2i3da1 3 VIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHG--AG 79 (218)
T ss_dssp EEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSS--HH
T ss_pred EEEeCCCc-cEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccc--hh
Confidence 45666677 6765433 333456899999984 44433 1345567778877 999999999999998665432 22
Q ss_pred HHHHHHHHHHHh---C--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccc
Q 024228 98 QAECMAKGLRKL---G--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (270)
Q Consensus 98 ~~~~~~~~l~~~---~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (270)
..+|..++++.+ . ..+++++|+|+||.+++.++.+.+. +.+++++.+........
T Consensus 80 e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~------------------- 139 (218)
T d2i3da1 80 ELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYDFS------------------- 139 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSCCT-------------------
T ss_pred HHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc-ccceeeccccccccchh-------------------
Confidence 334444444433 2 3578999999999999999888764 77778777654321100
Q ss_pred ccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc----CCceEEEecCCCcceeecch
Q 024228 173 KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG----QNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~ 248 (270)
......+|.++++|+.|.+++......+.+.+. ...++++++|++|++. .+.
T Consensus 140 -----------------------~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~ 195 (218)
T d2i3da1 140 -----------------------FLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKV 195 (218)
T ss_dssp -----------------------TCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCH
T ss_pred -----------------------hccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCH
Confidence 011112799999999999999999988887765 2358899999999875 666
Q ss_pred HhHHHHHHHHHHhhhhhc
Q 024228 249 FVYNRQLKTILASLVHAN 266 (270)
Q Consensus 249 ~~~~~~i~~fl~~~~~~~ 266 (270)
+++.+.+.+||+++.+++
T Consensus 196 ~~l~~~v~~~l~~~l~~~ 213 (218)
T d2i3da1 196 DELMGECEDYLDRRLNGE 213 (218)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 889999999999887654
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=6.2e-23 Score=152.85 Aligned_cols=224 Identities=13% Similarity=0.102 Sum_probs=132.8
Q ss_pred ceeEEEeecCCeEEEEEe--cCC---CCCCceEEEeCCCCCcc--cccH--HHHHHHhhcc-ceEEeecCCCCCCCCCC-
Q 024228 21 MTQRTIEIEPGTILNIWV--PKK---TTKKHAVVLLHPFGFDG--ILTW--QFQVLALAKT-YEVYVPDFLFFGSSVTD- 89 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~--~~~---~~~~~~vv~~hG~~~~~--~~~~--~~~~~~l~~~-~~v~~~d~~g~G~s~~~- 89 (270)
++..++.+ ||..|+.+. |.+ .++.|+||++||+++.. ...| ......|+++ |.|+++|+||.+.+...
T Consensus 3 v~~~~i~~-dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~ 81 (258)
T d1xfda2 3 VEYRDIEI-DDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKL 81 (258)
T ss_dssp CCBCCEEE-TTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred eEEEEEee-CCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhH
Confidence 45556676 899997644 332 12237999999963221 1133 2234567777 99999999986533210
Q ss_pred ----CCCCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhh
Q 024228 90 ----RPDRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSN 155 (270)
Q Consensus 90 ----~~~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~ 155 (270)
..... ....+|+.++++.+ +.++++++|+|+||.+++.++...++ .+...+...+..........
T Consensus 82 ~~~~~~~~g-~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T d1xfda2 82 LHEVRRRLG-LLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASA 160 (258)
T ss_dssp HHTTTTCTT-THHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHH
T ss_pred hhhhhccch-hHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccccc
Confidence 01111 12355565666654 34579999999999999988776654 35555555554332211111
Q ss_pred HhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhh-hheeeeEEEcCCCccCCHHHHHHHHHHhc---CCc
Q 024228 156 AALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKH-ILEKIHLLWGENDKIFDMQVARNLKEQVG---QNA 231 (270)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~ 231 (270)
........... ..... ... .+...... ..+|+|+++|+.|..+|++.+.++.+.+. .+.
T Consensus 161 ~~~~~~~~~~~----~~~~~------------~~~-s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~ 223 (258)
T d1xfda2 161 FSERYLGLHGL----DNRAY------------EMT-KVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANY 223 (258)
T ss_dssp HHHHHHCCCSS----CCSST------------TTT-CTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccc----chHHh------------hcc-chhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCE
Confidence 11111100000 00000 000 00111111 13799999999999999999888877654 367
Q ss_pred eEEEecCCCcceee-cchHhHHHHHHHHHHhhh
Q 024228 232 TMESIEKAGHLVNL-ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 232 ~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 263 (270)
+++++|+++|.+.. +....+.+.+.+||++..
T Consensus 224 ~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~ 256 (258)
T d1xfda2 224 SLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 256 (258)
T ss_dssp EEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred EEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhh
Confidence 89999999998754 445667799999998764
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.87 E-value=7.1e-21 Score=145.45 Aligned_cols=231 Identities=17% Similarity=0.160 Sum_probs=153.0
Q ss_pred CeEEEEEecCCC--CCCceEEEeCCCCCcccc--------cHHHHH---HHhhcc-ceEEeecCCCCCCCCCCC------
Q 024228 31 GTILNIWVPKKT--TKKHAVVLLHPFGFDGIL--------TWQFQV---LALAKT-YEVYVPDFLFFGSSVTDR------ 90 (270)
Q Consensus 31 g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~--------~~~~~~---~~l~~~-~~v~~~d~~g~G~s~~~~------ 90 (270)
..+|.|...|.. ...++||+.|++.+++.. .|..++ ..|... |.||++|..|.|.++..+
T Consensus 23 ~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~ 102 (357)
T d2b61a1 23 YINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQ 102 (357)
T ss_dssp SEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTT
T ss_pred CceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCC
Confidence 467789888753 345799999999987651 244443 345444 999999999987643222
Q ss_pred ---------CCCChHHHHHHHHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH----
Q 024228 91 ---------PDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA---- 156 (270)
Q Consensus 91 ---------~~~~~~~~~~~~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~---- 156 (270)
+..++.+++..-..++++++++++ .++|.||||+.|+.+|.++|++|+++|.+++...........
T Consensus 103 tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~ 182 (357)
T d2b61a1 103 TGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVM 182 (357)
T ss_dssp TSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHH
T ss_pred CCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHHH
Confidence 135778888888899999999998 567999999999999999999999999998876443211100
Q ss_pred ---hhhhccch-----------------------------hhhhhccc------------ccHHHHHHHH----------
Q 024228 157 ---ALERIGYE-----------------------------SWVDFLLP------------KTADALKVQF---------- 182 (270)
Q Consensus 157 ---~~~~~~~~-----------------------------~~~~~~~~------------~~~~~~~~~~---------- 182 (270)
......+. .....+.. ...+.+....
T Consensus 183 ~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDa 262 (357)
T d2b61a1 183 RQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDA 262 (357)
T ss_dssp HHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCH
Confidence 00000000 00000000 0000000000
Q ss_pred -------Hhhh-h---cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCC-Ccceeecc
Q 024228 183 -------DIAC-Y---KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKA-GHLVNLER 247 (270)
Q Consensus 183 -------~~~~-~---~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~-gH~~~~~~ 247 (270)
.... + .........+..+.+|+|+|..+.|.++|++..+..++.++ .++++++++.. ||..++-.
T Consensus 263 n~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~e 342 (357)
T d2b61a1 263 NSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVD 342 (357)
T ss_dssp HHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHC
T ss_pred HHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccCcC
Confidence 0000 0 00111223355556999999999999999999998888886 24688888864 99998877
Q ss_pred hHhHHHHHHHHHHh
Q 024228 248 PFVYNRQLKTILAS 261 (270)
Q Consensus 248 ~~~~~~~i~~fl~~ 261 (270)
.+++.+.|.+||+.
T Consensus 343 ~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 343 YDQFEKRIRDGLAG 356 (357)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcc
Confidence 88999999999974
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.87 E-value=3.9e-24 Score=164.06 Aligned_cols=232 Identities=15% Similarity=0.138 Sum_probs=133.4
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHH-------HHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQF-------QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAEC 101 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-------~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 101 (270)
++..+.|+.+.+ +++++|||+||++.++. .|.. +++.+.++ |+|+++|+||||.|.......+...+.++
T Consensus 44 ~~~~v~~~~p~~-~~~~PvvllHG~~~~~~-~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~ 121 (318)
T d1qlwa_ 44 DQMYVRYQIPQR-AKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKA 121 (318)
T ss_dssp SCEEEEEEEETT-CCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSS
T ss_pred ceEEEEEECCCC-CCCCcEEEECCCCCCcC-ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHH
Confidence 566778887776 34677999999999988 8864 46666666 99999999999999865443444444445
Q ss_pred HHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccc-cccEEEecccCCCCchh-----hhHhhhhccchhhhhhcccc
Q 024228 102 MAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDL-VESMVVTCSVMGLTESV-----SNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 102 ~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 173 (270)
+.+.++.+. ..+..++|||+||.++..++...+.. ....++.++........ ....................
T Consensus 122 ~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T d1qlwa_ 122 PASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSH 201 (318)
T ss_dssp CGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHTSEEEEEE
T ss_pred HHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhccccchhh
Confidence 555554443 23567789999999988877665432 22222222222111100 00000000000000000000
Q ss_pred cHHHHHHHHHhhhh------------cCCCChhhhhhhhheeeeEEEcCCCccCCHH-----HHHHHHHHh---cCCceE
Q 024228 174 TADALKVQFDIACY------------KLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-----VARNLKEQV---GQNATM 233 (270)
Q Consensus 174 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-----~~~~~~~~~---~~~~~~ 233 (270)
.............. .....+........+|+|+++|++|..+|.. ..+.+.+.+ ..++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~ 281 (318)
T d1qlwa_ 202 SQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQL 281 (318)
T ss_dssp GGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred hcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEE
Confidence 00000000000000 0112233444555699999999999999843 333333333 236788
Q ss_pred EEec-----CCCcceeecch-HhHHHHHHHHHHhhh
Q 024228 234 ESIE-----KAGHLVNLERP-FVYNRQLKTILASLV 263 (270)
Q Consensus 234 ~~~~-----~~gH~~~~~~~-~~~~~~i~~fl~~~~ 263 (270)
+.++ |+||+++.|.+ +++++.|.+||+++.
T Consensus 282 ~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 282 MSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp EEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred EEecccccCCCcCccccCcCHHHHHHHHHHHHHhcc
Confidence 8865 67899998765 899999999999864
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.87 E-value=7.3e-21 Score=145.64 Aligned_cols=231 Identities=15% Similarity=0.158 Sum_probs=151.7
Q ss_pred CeEEEEEecCCC--CCCceEEEeCCCCCccc------------ccHHHHH---HHhhcc-ceEEeecCCCCCCCCCCC--
Q 024228 31 GTILNIWVPKKT--TKKHAVVLLHPFGFDGI------------LTWQFQV---LALAKT-YEVYVPDFLFFGSSVTDR-- 90 (270)
Q Consensus 31 g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~------------~~~~~~~---~~l~~~-~~v~~~d~~g~G~s~~~~-- 90 (270)
..+|.|...|.. ...++||+.|++.+++. ..|..++ ..|..+ |.||++|..|.|.|+.++
T Consensus 26 ~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s 105 (362)
T d2pl5a1 26 PVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLS 105 (362)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTS
T ss_pred CceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCccc
Confidence 356788877753 34578999999988742 1344443 445555 999999999988765432
Q ss_pred -------------CCCChHHHHHHHHHHHHHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-
Q 024228 91 -------------PDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN- 155 (270)
Q Consensus 91 -------------~~~~~~~~~~~~~~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~- 155 (270)
+..++.+++..-..++++++++++. ++|.||||+.|+.+|..+|+.|+++|.+++..........
T Consensus 106 ~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~~ 185 (362)
T d2pl5a1 106 IHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAF 185 (362)
T ss_dssp BCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHH
T ss_pred cccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHHH
Confidence 1246777888888899999999987 6799999999999999999999999999987654321100
Q ss_pred ------Hhhhhccchh----------------hhhhcccccHHHHHHHH-------------------------------
Q 024228 156 ------AALERIGYES----------------WVDFLLPKTADALKVQF------------------------------- 182 (270)
Q Consensus 156 ------~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~------------------------------- 182 (270)
.......+.. ......-.....+...+
T Consensus 186 ~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~rf 265 (362)
T d2pl5a1 186 NEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRF 265 (362)
T ss_dssp HHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCC
T ss_pred HHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHhcC
Confidence 0000000000 00000000000000000
Q ss_pred ---------Hhhhh-cCC--CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecC-CCcceeec
Q 024228 183 ---------DIACY-KLP--TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEK-AGHLVNLE 246 (270)
Q Consensus 183 ---------~~~~~-~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~-~gH~~~~~ 246 (270)
..... ... ......+..+..|+|+|..+.|.++|++..+.+++.++ .++++++++. .||..++.
T Consensus 266 Dan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHdaFL~ 345 (362)
T d2pl5a1 266 DANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFLL 345 (362)
T ss_dssp CHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGGGS
T ss_pred CHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhcc
Confidence 00000 000 00112345555999999999999999999999999987 2457777764 69999888
Q ss_pred chHhHHHHHHHHHHh
Q 024228 247 RPFVYNRQLKTILAS 261 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~ 261 (270)
..+++.+.|.+||++
T Consensus 346 e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 346 KNPKQIEILKGFLEN 360 (362)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHcC
Confidence 888899999999974
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=1.2e-20 Score=135.26 Aligned_cols=172 Identities=16% Similarity=0.095 Sum_probs=125.3
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC------CCCChHH---HHHHHHHHHH----Hh
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR------PDRTASF---QAECMAKGLR----KL 109 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~------~~~~~~~---~~~~~~~~l~----~~ 109 (270)
++.|+||++||++++.. .|..+++.|.+++.++.++.+..+...... ...+.++ ..+.+..+++ ..
T Consensus 15 ~~~P~vi~lHG~G~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 93 (203)
T d2r8ba1 15 AGAPLFVLLHGTGGDEN-QFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHY 93 (203)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhhcC
Confidence 56899999999999988 999999999888888888766444332111 1122222 2334444443 35
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (270)
+.++++++|+|+||.+++.++..+|+.+.+++++++..+..... .
T Consensus 94 ~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~----------------------------------~- 138 (203)
T d2r8ba1 94 QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKI----------------------------------S- 138 (203)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCCC----------------------------------C-
T ss_pred CCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccccc----------------------------------c-
Confidence 77899999999999999999999999999999998865422110 0
Q ss_pred CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 190 PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 190 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
......|++++||++|+++|.+.++++.+.+. .+++++++++ ||.+. ++ ..+.+.+||.++
T Consensus 139 -------~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 139 -------PAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp -------CCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCC---HH-HHHHHHHHHGGG
T ss_pred -------cccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC---HH-HHHHHHHHHHhc
Confidence 00011799999999999999999999888775 2468899986 89853 33 456788999764
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.86 E-value=4.3e-21 Score=138.05 Aligned_cols=169 Identities=15% Similarity=0.122 Sum_probs=114.9
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCC--CC--CCC--CCCCCChHHH---HHHHHH----HHHHh
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFF--GS--SVT--DRPDRTASFQ---AECMAK----GLRKL 109 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~--G~--s~~--~~~~~~~~~~---~~~~~~----~l~~~ 109 (270)
++.|+||++||++++.. .|..+++.|.+++.+++++.+.. |. ... .....+.... ++++.+ +.++.
T Consensus 21 ~~~p~vv~lHG~g~~~~-~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 99 (209)
T d3b5ea1 21 ESRECLFLLHGSGVDET-TLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRH 99 (209)
T ss_dssp SCCCEEEEECCTTBCTT-TTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH-HHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHHHh
Confidence 56899999999999998 99999999998888888875421 10 000 0111222222 233333 33333
Q ss_pred --CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhh
Q 024228 110 --GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACY 187 (270)
Q Consensus 110 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (270)
+.++++++|||+||.+++.++.++|+++++++++++........
T Consensus 100 ~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~~~---------------------------------- 145 (209)
T d3b5ea1 100 GLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHVP---------------------------------- 145 (209)
T ss_dssp TCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSCC----------------------------------
T ss_pred CcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccccc----------------------------------
Confidence 35689999999999999999999999999999998764321100
Q ss_pred cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 188 KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 188 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
......+|+++++|++|++++. .++++.+.+. .+++++++++ ||... ++ ..+.+.+||.
T Consensus 146 --------~~~~~~~p~~~~~G~~D~~~~~-~~~~~~~~l~~~G~~v~~~~~~g-gH~i~---~~-~~~~~~~wl~ 207 (209)
T d3b5ea1 146 --------ATDLAGIRTLIIAGAADETYGP-FVPALVTLLSRHGAEVDARIIPS-GHDIG---DP-DAAIVRQWLA 207 (209)
T ss_dssp --------CCCCTTCEEEEEEETTCTTTGG-GHHHHHHHHHHTTCEEEEEEESC-CSCCC---HH-HHHHHHHHHH
T ss_pred --------ccccccchheeeeccCCCccCH-HHHHHHHHHHHCCCCeEEEEECC-CCCCC---HH-HHHHHHHHhC
Confidence 0000117999999999999974 4444555443 3568899986 79773 33 3466789985
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.86 E-value=4e-20 Score=135.13 Aligned_cols=196 Identities=17% Similarity=0.105 Sum_probs=133.9
Q ss_pred eEEEeecCCeEEEEEecC-CCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC--------
Q 024228 23 QRTIEIEPGTILNIWVPK-KTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-------- 92 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~-~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-------- 92 (270)
...++..||..+..+... ..++.|.||++|+..+... ....+++.|++. |.|+++|+.+.+........
T Consensus 5 ~v~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~-~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~ 83 (233)
T d1dina_ 5 GISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQ 83 (233)
T ss_dssp TCCEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHH
T ss_pred EEEEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCH-HHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHH
Confidence 345677789888655443 3356789999998777666 667788889888 99999999876554432211
Q ss_pred -------CChHHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh
Q 024228 93 -------RTASFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 93 -------~~~~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
.+.+....|+...++.+. .+++.++|+|+||.+++.++... .+.+.+.+.+.....
T Consensus 84 ~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~~~---------- 151 (233)
T d1dina_ 84 AYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGLEK---------- 151 (233)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCGGG----------
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceecccccccccc----------
Confidence 233344566666666552 23799999999999999988764 356655543321100
Q ss_pred ccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc--CCceEEEecC
Q 024228 161 IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG--QNATMESIEK 238 (270)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 238 (270)
......++.+|+|+++|++|+.+|.+..+.+.+.+. .+.++++++|
T Consensus 152 --------------------------------~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~g 199 (233)
T d1dina_ 152 --------------------------------QLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEE 199 (233)
T ss_dssp --------------------------------GGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETT
T ss_pred --------------------------------chhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECC
Confidence 000112333799999999999999998888877665 3568999999
Q ss_pred CCcceeecc--------hHhHHHHHHHHHHhhh
Q 024228 239 AGHLVNLER--------PFVYNRQLKTILASLV 263 (270)
Q Consensus 239 ~gH~~~~~~--------~~~~~~~i~~fl~~~~ 263 (270)
++|.+..+. .+..++.+.+||..+.
T Consensus 200 a~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 200 AGHSFARTSSSGYVASAAALANERTLDFLAPLQ 232 (233)
T ss_dssp CCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred CCcCCCCCCCccCCHHHHHHHHHHHHHHHHcCc
Confidence 999875422 1234577778887653
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=1.4e-18 Score=129.42 Aligned_cols=196 Identities=11% Similarity=0.130 Sum_probs=113.8
Q ss_pred CCCceEEEeCCCCC-----cccccHHHHH----HHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC
Q 024228 43 TKKHAVVLLHPFGF-----DGILTWQFQV----LALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE 112 (270)
Q Consensus 43 ~~~~~vv~~hG~~~-----~~~~~~~~~~----~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~ 112 (270)
+++|+||++||++. +.. .|..+. ..+.+. |.|+++|+|..+.... ....++..+.+..+++..+.+
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~-~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~---~~~~~d~~~~~~~l~~~~~~~ 104 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPN-DFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGLT 104 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGG-GGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTCC
T ss_pred CCCcEEEEECCCCccCCCCCcc-hHHHHHHHHHHHHHhCCeEEEEeccccCcchhh---hHHHHhhhhhhhccccccccc
Confidence 56899999999642 222 444443 444555 9999999997654331 223455555566666777888
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccc-----------------cEEEecccCCCCchhhhHhhhhc-cchhhhhhccccc
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVE-----------------SMVVTCSVMGLTESVSNAALERI-GYESWVDFLLPKT 174 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~-----------------~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 174 (270)
+++|+|||+||.+++.++...++... ..+...+...... ..... .............
T Consensus 105 ~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 179 (263)
T d1vkha_ 105 NINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKE-----LLIEYPEYDCFTRLAFPDG 179 (263)
T ss_dssp CEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHH-----HHHHCGGGHHHHHHHCTTC
T ss_pred ceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchh-----hhhhccccchhhhcccccc
Confidence 99999999999999999887654322 2222221111000 00000 0000000000000
Q ss_pred HHHH---HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecch
Q 024228 175 ADAL---KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 175 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~ 248 (270)
.... ..... ...........+|+++++|++|+++|.+.+..+.+.+. .+++++++++++|...+++.
T Consensus 180 ~~~~~~~~~~~~-------~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~~ 252 (263)
T d1vkha_ 180 IQMYEEEPSRVM-------PYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNG 252 (263)
T ss_dssp GGGCCCCHHHHH-------HHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGCH
T ss_pred cccccccccccC-------ccccccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCchhhhcCh
Confidence 0000 00000 00011233444899999999999999999999988775 35789999999998766664
Q ss_pred HhHHHHH
Q 024228 249 FVYNRQL 255 (270)
Q Consensus 249 ~~~~~~i 255 (270)
+ +.+.|
T Consensus 253 ~-~~~~i 258 (263)
T d1vkha_ 253 K-VAKYI 258 (263)
T ss_dssp H-HHHHH
T ss_pred H-HHHHH
Confidence 3 44444
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.81 E-value=1.1e-19 Score=136.64 Aligned_cols=211 Identities=13% Similarity=0.013 Sum_probs=129.6
Q ss_pred EEEEecCCCCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV 111 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~ 111 (270)
++.....+...+++|||+||++.+.. ..|..+.+.|.+. |.|+.+|+||+|.++. ..+.+++++.+..+++..+.
T Consensus 20 ~~~~~~~p~~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~---~~sae~la~~i~~v~~~~g~ 96 (317)
T d1tcaa_ 20 LTCQGASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITALYAGSGN 96 (317)
T ss_dssp EEETTBCTTSCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTS
T ss_pred cccccCCCCCCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCch---HhHHHHHHHHHHHHHHhccC
Confidence 33333333445678999999988766 1356788999988 9999999999987752 23455566667777777788
Q ss_pred CceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhc
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYK 188 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
+++.|+||||||.++..++..+|+ +|+.+|.+++........................... . .++......
T Consensus 97 ~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~~~~~~~~~~pa~~q~~~~---s---~fl~~L~~~ 170 (317)
T d1tcaa_ 97 NKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTTG---S---ALTTALRNA 170 (317)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHTBTT---C---HHHHHHHHT
T ss_pred CceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCcccccchhhhhccCchhhhhcCC---c---HHHHHHHhC
Confidence 999999999999999999999884 6999999998754332111100000000000000000 0 111111100
Q ss_pred CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEec-------CCCcceeecchHhHHHHHHHHHH
Q 024228 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIE-------KAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 189 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.... -.+|++.|++..|.+|.+.....+.+... .+++-+++. -.+|..+..+|. +...+.+-|.
T Consensus 171 ~~~~-------~~V~~t~I~s~~D~iV~P~~~~~~~~~~~~~~~~Ni~vq~~c~~~~~~~H~~l~~~p~-~~~~v~daL~ 242 (317)
T d1tcaa_ 171 GGLT-------QIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVIDHAGSLTSQF-SYVVGRSALR 242 (317)
T ss_dssp TTTB-------CSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCCCCTTHHHHBHH-HHHHHHHHHH
T ss_pred CCCC-------CCCCEEEEecCCCcccCccccchhccccCCCCceeEEeecccCCCCcCCccccccCHH-HHHHHHHHHh
Confidence 0000 01799999999999997755443332211 145545542 357888777776 4466666664
Q ss_pred h
Q 024228 261 S 261 (270)
Q Consensus 261 ~ 261 (270)
+
T Consensus 243 ~ 243 (317)
T d1tcaa_ 243 S 243 (317)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.79 E-value=6.1e-18 Score=122.21 Aligned_cols=175 Identities=16% Similarity=0.145 Sum_probs=113.3
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCC--------CCCCCC------C-CCCCChHHH---HHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLF--------FGSSVT------D-RPDRTASFQ---AEC 101 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g--------~G~s~~------~-~~~~~~~~~---~~~ 101 (270)
+.+++||++||++++.. .|..+.+.|.+. +.+++++-|. ...... . ......+.. .+.
T Consensus 12 ~~~~~Vi~lHG~G~~~~-~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 90 (218)
T d1auoa_ 12 PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKM 90 (218)
T ss_dssp CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCChh-hHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHH
Confidence 45679999999999998 998888888765 5566655431 100000 0 011122222 222
Q ss_pred HHHHHHH-----hCCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccH
Q 024228 102 MAKGLRK-----LGVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (270)
Q Consensus 102 ~~~~l~~-----~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
+.++++. ++.++++++|+|+||.+++.++.. .+..+.+++.+++..+....... ..
T Consensus 91 v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~-----------------~~- 152 (218)
T d1auoa_ 91 VTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELE-----------------LS- 152 (218)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTCC-----------------CC-
T ss_pred HHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccccccc-----------------cc-
Confidence 3333332 245689999999999999988754 46678888888765432110000 00
Q ss_pred HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHH
Q 024228 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYN 252 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~ 252 (270)
......|++++||++|.++|.+.++++.+.+. .++++++++ +||... .+..
T Consensus 153 ---------------------~~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~----~~~~ 206 (218)
T d1auoa_ 153 ---------------------ASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL----PQEI 206 (218)
T ss_dssp ---------------------HHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC----HHHH
T ss_pred ---------------------hhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccC----HHHH
Confidence 00111799999999999999999998888776 256888887 689653 2345
Q ss_pred HHHHHHHHhh
Q 024228 253 RQLKTILASL 262 (270)
Q Consensus 253 ~~i~~fl~~~ 262 (270)
+.+.+||.+.
T Consensus 207 ~~i~~wl~~~ 216 (218)
T d1auoa_ 207 HDIGAWLAAR 216 (218)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7789998765
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.79 E-value=3.1e-18 Score=126.62 Aligned_cols=185 Identities=17% Similarity=0.172 Sum_probs=122.5
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l 106 (270)
..++.++.+.. .+.|+||++||++ ++.. .|..++..|.++ |.|+++|+|..+. .+.....+|+.+.+
T Consensus 49 ~~~lDiy~P~~-~~~P~vv~iHGG~w~~g~~~-~~~~~a~~l~~~G~~Vv~~~YRl~p~-------~~~p~~~~d~~~a~ 119 (261)
T d2pbla1 49 RHKFDLFLPEG-TPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPE-------VRISEITQQISQAV 119 (261)
T ss_dssp TCEEEEECCSS-SCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTT-------SCHHHHHHHHHHHH
T ss_pred CeEEEEeccCC-CCCCeEEEECCCCCccCChh-HhhhHHHHHhcCCceeeccccccccc-------ccCchhHHHHHHHH
Confidence 34677777765 4679999999965 3444 666778888887 9999999996533 34555566666555
Q ss_pred HHh---CCCceEEEEEchhHHHHHHHHhhCc------cccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHH
Q 024228 107 RKL---GVEKCTLVGVSYGGMVGFKMAEMYP------DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (270)
Q Consensus 107 ~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p------~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
+.+ ..++++|+|||.||+++..++.... ..+++++.+++................ ......
T Consensus 120 ~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 189 (261)
T d2pbla1 120 TAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEKF----------KMDADA 189 (261)
T ss_dssp HHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHHH----------CCCHHH
T ss_pred HHHHhcccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhcccc----------cCCHHH
Confidence 544 2479999999999999987765532 257888888877664332111110000 011111
Q ss_pred HHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 178 LKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
.... .+........+|+++++|++|..++.++++.+.+.+ +++.+++++.+|+..++
T Consensus 190 ~~~~----------SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l--~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 190 AIAE----------SPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAW--DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp HHHT----------CGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHH--TCEEEEETTCCTTTTTG
T ss_pred HHHh----------CchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHh--CCCceEeCCCCchhHHH
Confidence 1100 011112223389999999999988888999999988 47889999999976553
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.77 E-value=2.6e-17 Score=127.56 Aligned_cols=237 Identities=11% Similarity=-0.039 Sum_probs=129.5
Q ss_pred eeEEEeecCCeEEEE--EecCC-CCCCceEEEeCCCCCc---cc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCC
Q 024228 22 TQRTIEIEPGTILNI--WVPKK-TTKKHAVVLLHPFGFD---GI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~--~~~~~-~~~~~~vv~~hG~~~~---~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~ 93 (270)
+...+...||..+.. +.+.+ ..+.|+||++||++.. .. ..+..++..+++. +.|+++|||..+...+. .
T Consensus 80 ~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe---~ 156 (358)
T d1jkma_ 80 STETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH---H 156 (358)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEE---C
T ss_pred EEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccccc---C
Confidence 444555668876654 44443 2345789999998642 22 1355677788777 99999999976332211 1
Q ss_pred ChHHHHHHHHHHHH-------HhCCCceEEEEEchhHHHHHHHHhh-----CccccccEEEecccCCCCchhhhHhhhhc
Q 024228 94 TASFQAECMAKGLR-------KLGVEKCTLVGVSYGGMVGFKMAEM-----YPDLVESMVVTCSVMGLTESVSNAALERI 161 (270)
Q Consensus 94 ~~~~~~~~~~~~l~-------~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~i~~~~~~~~~~~~~~~~~~~~ 161 (270)
......+|+.+.++ .++.++++|+|+|.||.+++.++.. ....+.++++..|................
T Consensus 157 ~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 236 (358)
T d1jkma_ 157 PFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTE 236 (358)
T ss_dssp CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccchhhccc
Confidence 12223334333332 3466799999999999999877654 23457888888877654322111110000
Q ss_pred cchhhhhhcccccHHHHHHHHHhhhhcC----CCChhh-----hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---C
Q 024228 162 GYESWVDFLLPKTADALKVQFDIACYKL----PTLPAF-----VYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---Q 229 (270)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~ 229 (270)
...................+........ ...... ....-..|+++++|+.|.+. ..+..+.+++. .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~--~e~~~~~~~L~~aGv 314 (358)
T d1jkma_ 237 LPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLR--DEGIAFARRLARAGV 314 (358)
T ss_dssp CTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTC
T ss_pred ccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCCCCH--HHHHHHHHHHHHCCC
Confidence 0000000000001111111111111000 000000 00111269999999999765 35556665554 3
Q ss_pred CceEEEecCCCcceee-------cchHhHHHHHHHHHHhhh
Q 024228 230 NATMESIEKAGHLVNL-------ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~-------~~~~~~~~~i~~fl~~~~ 263 (270)
.+++++++|.+|.+.. +..++..+.|..|+.+..
T Consensus 315 ~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~ 355 (358)
T d1jkma_ 315 DVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 355 (358)
T ss_dssp CEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 6899999999996522 223457788889997654
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.77 E-value=9.3e-19 Score=133.54 Aligned_cols=103 Identities=22% Similarity=0.239 Sum_probs=89.9
Q ss_pred CCceEEEeCCCCCccc-----ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGI-----LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-----~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 117 (270)
++.||||+||++++.. ..|..+.+.|.+. |+|+++|+||+|.|+... ...+++.+++.++++.++.++++++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~--~~~~~l~~~i~~~~~~~~~~~v~lv 84 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN--GRGEQLLAYVKQVLAATGATKVNLI 84 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT--SHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc--ccHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4667999999988765 1377889999998 999999999999887433 4567888999999999999999999
Q ss_pred EEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
||||||.++..++.++|++|+++|+++++..
T Consensus 85 GhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~ 115 (319)
T d1cvla_ 85 GHSQGGLTSRYVAAVAPQLVASVTTIGTPHR 115 (319)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred eccccHHHHHHHHHHCccccceEEEECCCCC
Confidence 9999999999999999999999999998654
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.75 E-value=6.8e-18 Score=128.48 Aligned_cols=221 Identities=14% Similarity=0.090 Sum_probs=121.4
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCCh
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
++...+..++| .+.++...+.++.|+||++||++ ++.. .+..++..+.+. +.|+++|+|...+.. .
T Consensus 56 ~~~~~i~~~~g-~i~~~iy~P~~~~P~il~iHGGg~~~g~~~-~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~-------~ 126 (311)
T d1jjia_ 56 VEDRTIKGRNG-DIRVRVYQQKPDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHK-------F 126 (311)
T ss_dssp EEEEEEEETTE-EEEEEEEESSSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSC-------T
T ss_pred EEEEEEeCCCC-cEEEEEEcCCCCceEEEEEcCCCCccCChh-hhhhhhhhhhhcCCcEEEEeccccccccc-------c
Confidence 44566766655 44443333334679999999986 3444 566666666543 999999999653322 2
Q ss_pred HHHHHHHHHHH-------HHhC--CCceEEEEEchhHHHHHHHHhhC----ccccccEEEecccCCCCchhhhHhhhhcc
Q 024228 96 SFQAECMAKGL-------RKLG--VEKCTLVGVSYGGMVGFKMAEMY----PDLVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 96 ~~~~~~~~~~l-------~~~~--~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
....+|....+ +.++ .+++++.|+|.||.+++.++... .....+.+++.|.................
T Consensus 127 p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~ 206 (311)
T d1jjia_ 127 PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEG 206 (311)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTSSS
T ss_pred chhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccccccc
Confidence 22223333322 2233 35899999999999888776543 23467788888876643322111110000
Q ss_pred chhhhhhcccccHHHHHHHHHhhh----hcCCCChhhhh--hhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceE
Q 024228 163 YESWVDFLLPKTADALKVQFDIAC----YKLPTLPAFVY--KHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATM 233 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~ 233 (270)
................. ........... ..-..|+++++|+.|.+++ .+..+.+++. ..+++
T Consensus 207 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l~d--~~~~~~~~L~~~Gv~v~~ 277 (311)
T d1jjia_ 207 -------LWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLRD--EGEVFGQMLRRAGVEASI 277 (311)
T ss_dssp -------CSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTHH--HHHHHHHHHHHTTCCEEE
T ss_pred -------cccccHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCChH--HHHHHHHHHHHCCCCEEE
Confidence 00000000100000000 00000000011 1112799999999997754 4555665554 36799
Q ss_pred EEecCCCcceee-----cchHhHHHHHHHHH
Q 024228 234 ESIEKAGHLVNL-----ERPFVYNRQLKTIL 259 (270)
Q Consensus 234 ~~~~~~gH~~~~-----~~~~~~~~~i~~fl 259 (270)
++++|++|.+.. +..++..+.|.+||
T Consensus 278 ~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 278 VRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp EEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred EEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 999999996543 22345667777777
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.72 E-value=5.6e-17 Score=123.84 Aligned_cols=227 Identities=12% Similarity=-0.001 Sum_probs=117.4
Q ss_pred CCceeEEEee--cCC---eEEEEEecCCC-CCCceEEEeCCCC---CcccccHHHHHHHhh-c-cceEEeecCCCCCCCC
Q 024228 19 VGMTQRTIEI--EPG---TILNIWVPKKT-TKKHAVVLLHPFG---FDGILTWQFQVLALA-K-TYEVYVPDFLFFGSSV 87 (270)
Q Consensus 19 ~~~~~~~i~~--~~g---~~l~~~~~~~~-~~~~~vv~~hG~~---~~~~~~~~~~~~~l~-~-~~~v~~~d~~g~G~s~ 87 (270)
.+++.+.+.+ .+| ..+.++.+.+. ++.|+||++||++ ++.. .+..++..++ + .|.|+.+|+|...+..
T Consensus 46 ~~v~~~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~-~~~~~~~~la~~~G~~V~~vdYrl~pe~~ 124 (317)
T d1lzla_ 46 DGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETT 124 (317)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred CCceEEEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCccccccccc-ccchHHHhHHhhcCCcccccccccccccc
Confidence 3455555554 455 34566666543 3457899999975 3444 5666666665 4 3999999999765543
Q ss_pred CCCCCCChHHHHHHHHHH-------HHHhC--CCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhh
Q 024228 88 TDRPDRTASFQAECMAKG-------LRKLG--VEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVS 154 (270)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~-------l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~ 154 (270)
. ....+|+.+. .+.++ .++++++|+|.||.+++.++...++ .....++..+.........
T Consensus 125 ~-------~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (317)
T d1lzla_ 125 F-------PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV 197 (317)
T ss_dssp T-------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH
T ss_pred c-------cccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccccccccccccccc
Confidence 2 1222333222 23333 3589999999999999988876432 1223333332222111100
Q ss_pred hHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC---CC-------Chhhhh--hhhheeeeEEEcCCCccCCHHHHHH
Q 024228 155 NAALERIGYESWVDFLLPKTADALKVQFDIACYKL---PT-------LPAFVY--KHILEKIHLLWGENDKIFDMQVARN 222 (270)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~ 222 (270)
.. ...... .. ................. .. ...... .....|+++++|++|.+ ...+..
T Consensus 198 -s~-~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~l--~~~~~~ 267 (317)
T d1lzla_ 198 -SM-TNFVDT-----PL-WHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL--RDEGIE 267 (317)
T ss_dssp -HH-HHCSSC-----SS-CCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT--HHHHHH
T ss_pred -cc-cccccc-----ch-hhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCCC--HHHHHH
Confidence 00 000000 00 00000000000000000 00 000000 11127999999999965 346666
Q ss_pred HHHHhc---CCceEEEecCCCcceee-cc---hHhHHHHHHHHHHhhh
Q 024228 223 LKEQVG---QNATMESIEKAGHLVNL-ER---PFVYNRQLKTILASLV 263 (270)
Q Consensus 223 ~~~~~~---~~~~~~~~~~~gH~~~~-~~---~~~~~~~i~~fl~~~~ 263 (270)
+.+.+. ..+++++++|++|.+.. .. .+...+.+.+||++..
T Consensus 268 ~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~L 315 (317)
T d1lzla_ 268 YALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGL 315 (317)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHh
Confidence 766654 36799999999997643 21 2234455667776543
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.72 E-value=9.4e-18 Score=125.37 Aligned_cols=100 Identities=23% Similarity=0.157 Sum_probs=86.3
Q ss_pred CCceEEEeCCCCCccc----ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEE
Q 024228 44 KKHAVVLLHPFGFDGI----LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G 118 (270)
.+.||||+||++++.. .+|..+.+.|.+. |+|+++|++|+|.+. ...+++.+++.++++..+.++++++|
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~-----~~a~~l~~~i~~~~~~~g~~~v~lig 80 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNLIG 80 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH-----HHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4567999999987654 2478899999998 999999999988654 34667788889999999999999999
Q ss_pred EchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 119 VSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|||||.++..++..+|++|++++.++++..
T Consensus 81 HS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 81 HSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred ECccHHHHHHHHHHCCccceeEEEECCCCC
Confidence 999999999999999999999999987643
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.70 E-value=1.4e-16 Score=123.10 Aligned_cols=126 Identities=13% Similarity=0.144 Sum_probs=91.9
Q ss_pred eEEEeecCCeEEEE--EecCCCCCCceEEEeCCCCCccccc---HHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CCh
Q 024228 23 QRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFGFDGILT---WQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTA 95 (270)
Q Consensus 23 ~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~hG~~~~~~~~---~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~ 95 (270)
...|+..||.+|.. +.+....+-|+||+.||++...... +....+.|+++ |.|+++|.||+|.|+..... ...
T Consensus 7 ~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~~ 86 (347)
T d1ju3a2 7 NVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDD 86 (347)
T ss_dssp EEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTH
T ss_pred CeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccch
Confidence 35677779999976 4554444558899999977533212 22234567777 99999999999999976543 333
Q ss_pred HHHHHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 96 SFQAECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.....|+.+++..... .+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 87 ~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 87 EADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred hhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 4344556666655432 4899999999999999999999988999998887764
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.68 E-value=7.5e-15 Score=109.72 Aligned_cols=239 Identities=12% Similarity=0.012 Sum_probs=128.8
Q ss_pred eeEEEeecCCeEEEEEe--cCC---CCCCceEEEeCCCCCccc-ccH-HHHHHHhhcc-ceEEeecCCCCCCCCCCC---
Q 024228 22 TQRTIEIEPGTILNIWV--PKK---TTKKHAVVLLHPFGFDGI-LTW-QFQVLALAKT-YEVYVPDFLFFGSSVTDR--- 90 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~--~~~---~~~~~~vv~~hG~~~~~~-~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--- 90 (270)
+...++..||.+|..+. +.+ .++.|+||++||++.... ..+ ......+... +.+...+.++........
T Consensus 8 e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (280)
T d1qfma2 8 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKG 87 (280)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHT
T ss_pred EEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhhc
Confidence 44556667999987654 332 234589999999765433 122 2233344444 666666665443221100
Q ss_pred C-CCChHHHHHHHHHHH----HHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 91 P-DRTASFQAECMAKGL----RKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 91 ~-~~~~~~~~~~~~~~l----~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
. ........++..... ... .....++.|.|.||..+...+...++.+++++...+..............
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 163 (280)
T d1qfma2 88 GILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGH---- 163 (280)
T ss_dssp TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGG----
T ss_pred ccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhccccccc----
Confidence 0 111111222222222 222 23468889999999999999999998788877777665432211111000
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc----------CCceE
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG----------QNATM 233 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----------~~~~~ 233 (270)
......................... ...+.........|+|++||++|..||...+.++.+.+. ..+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l 242 (280)
T d1qfma2 164 AWTTDYGCSDSKQHFEWLIKYSPLH-NVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLI 242 (280)
T ss_dssp GGHHHHCCTTSHHHHHHHHHHCGGG-CCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEE
T ss_pred cceecccCCCccccccccccccccc-ccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEE
Confidence 0000000111111111111111111 111111111122589999999999999999999988872 24689
Q ss_pred EEecCCCcceeecch--HhHHHHHHHHHHhhhhh
Q 024228 234 ESIEKAGHLVNLERP--FVYNRQLKTILASLVHA 265 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~--~~~~~~i~~fl~~~~~~ 265 (270)
++++++||.+..... .+....+.+||++....
T Consensus 243 ~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~ 276 (280)
T d1qfma2 243 HVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 276 (280)
T ss_dssp EEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCC
Confidence 999999997643222 23344677899887653
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.68 E-value=2.9e-15 Score=113.74 Aligned_cols=227 Identities=16% Similarity=0.117 Sum_probs=126.3
Q ss_pred CceeEEEeecCCeEE--EEEecCC-CCCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTIL--NIWVPKK-TTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRP 91 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l--~~~~~~~-~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~ 91 (270)
.++...+.. +|..+ .++.+.+ .++.|+||++||++ ++.. .+..+...++.. +.|+.+|+|......
T Consensus 45 ~~~~~~~~~-~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~-~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~---- 118 (308)
T d1u4na_ 45 EVREFDMDL-PGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEHK---- 118 (308)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSC----
T ss_pred cEEEEEEec-CCceEEEEEEeccccCCCCCEEEEEecCeeeeeccc-cccchhhhhhhcccccccccccccccccc----
Confidence 345566666 57655 4555544 34568999999976 3444 667777777766 678899998543322
Q ss_pred CCChHHHHHHHHHHHHHh---------CCCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhh
Q 024228 92 DRTASFQAECMAKGLRKL---------GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAAL 158 (270)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~---------~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~ 158 (270)
.....+|+.+.++.+ +.+++++.|+|.||.+++.++....+ .+.+..++.+.............
T Consensus 119 ---~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (308)
T d1u4na_ 119 ---FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASI 195 (308)
T ss_dssp ---TTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHH
T ss_pred ---cccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchh
Confidence 222334444444332 23479999999999999888765432 35666677666543322111111
Q ss_pred hhccchhhhhhcccccHHHHHHHHHhhh-----hcCCCChhhhhh--hhheeeeEEEcCCCccCCHHHHHHHHHHhc---
Q 024228 159 ERIGYESWVDFLLPKTADALKVQFDIAC-----YKLPTLPAFVYK--HILEKIHLLWGENDKIFDMQVARNLKEQVG--- 228 (270)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 228 (270)
..... . ................ ............ .-..|+++++|+.|..++ .+..+.+.+.
T Consensus 196 ~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l~~--~~~~~~~~L~~~G 267 (308)
T d1u4na_ 196 EENAE-----G-YLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRD--VGKLYAEALNKAG 267 (308)
T ss_dssp HHTSS-----S-SSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTHH--HHHHHHHHHHHTT
T ss_pred hhccc-----c-ccccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecCcCCchH--HHHHHHHHHHHCC
Confidence 00000 0 0000000000000000 000000000000 011589999999997753 5566666654
Q ss_pred CCceEEEecCCCcceee-----cchHhHHHHHHHHHHhhh
Q 024228 229 QNATMESIEKAGHLVNL-----ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 229 ~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 263 (270)
..+++++++|.+|.+.. ...++..+.+.+||++..
T Consensus 268 ~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 268 VKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp CCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 36799999999997643 223467788888997753
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.64 E-value=1.4e-13 Score=108.04 Aligned_cols=196 Identities=9% Similarity=-0.026 Sum_probs=119.1
Q ss_pred HHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC--------------------CceEEEEEchhHH
Q 024228 66 VLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV--------------------EKCTLVGVSYGGM 124 (270)
Q Consensus 66 ~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~--------------------~~~~l~G~S~Gg~ 124 (270)
.+.|+++ |.|+.+|.||+|.|++.....+.++ .+|..++|+.+.. .+|.++|+|+||.
T Consensus 129 ~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~ 207 (405)
T d1lnsa3 129 NDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGT 207 (405)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHH
T ss_pred hHHHHhCCCEEEEECCCCCCCCCCccccCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHH
Confidence 3567777 9999999999999998765555543 6677777777642 2799999999999
Q ss_pred HHHHHHhhCccccccEEEecccCCCCchhhhH-------hhhhccchhhhhhc-----ccccH----HH----HHHHHHh
Q 024228 125 VGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-------ALERIGYESWVDFL-----LPKTA----DA----LKVQFDI 184 (270)
Q Consensus 125 ~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-----~~~~~----~~----~~~~~~~ 184 (270)
.++.+|...|..++++|..++........... .............. ..... .. .......
T Consensus 208 ~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (405)
T d1lnsa3 208 MAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAA 287 (405)
T ss_dssp HHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhhhchhhhhhccchhhhh
Confidence 99999999998999999988776532111000 00000000000000 00000 00 0000000
Q ss_pred hhh--------cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC--CceEEEecCCCcceeecc-hHhHHH
Q 024228 185 ACY--------KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ--NATMESIEKAGHLVNLER-PFVYNR 253 (270)
Q Consensus 185 ~~~--------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~-~~~~~~ 253 (270)
... .....+.....++.+|+|+++|..|..+++..+.++++.++. ..++++-+ .+|...... ..++.+
T Consensus 288 ~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lilgp-w~H~~~~~~~~~d~~~ 366 (405)
T d1lnsa3 288 LDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR-GAHIYMNSWQSIDFSE 366 (405)
T ss_dssp HCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES-CSSCCCTTBSSCCHHH
T ss_pred hhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEeC-CCCCCCcccccchHHH
Confidence 000 001122334556679999999999999998888888888752 35666666 588764322 234556
Q ss_pred HHHHHHHhhh
Q 024228 254 QLKTILASLV 263 (270)
Q Consensus 254 ~i~~fl~~~~ 263 (270)
.+.+|+....
T Consensus 367 ~~~~wFD~~L 376 (405)
T d1lnsa3 367 TINAYFVAKL 376 (405)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666766544
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.63 E-value=9.4e-15 Score=113.86 Aligned_cols=127 Identities=16% Similarity=0.086 Sum_probs=87.8
Q ss_pred eeEEEeecCCeEEEE--EecCCCCCCceEEEeCCCCCccc------ccH----HHHHHHhhcc-ceEEeecCCCCCCCCC
Q 024228 22 TQRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFGFDGI------LTW----QFQVLALAKT-YEVYVPDFLFFGSSVT 88 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~hG~~~~~~------~~~----~~~~~~l~~~-~~v~~~d~~g~G~s~~ 88 (270)
+...|+..||++|.. +.+...++-|+||+.|+++.... ..+ ....+.|+++ |.|+.+|.||+|.|..
T Consensus 25 ~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 104 (381)
T d1mpxa2 25 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 104 (381)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCC
Confidence 345666679999975 45555455688999998763211 011 1234667777 9999999999999986
Q ss_pred CCCCC---------ChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 89 DRPDR---------TASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 89 ~~~~~---------~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
..... ...+.++|..+.++.+ ..++|.++|+|+||.+++.+|...|..++++|..++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 105 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 53211 1112244554444433 234899999999999999999999989999999888754
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.60 E-value=7.3e-14 Score=102.98 Aligned_cols=198 Identities=15% Similarity=0.122 Sum_probs=112.8
Q ss_pred ceeEEEeec-CCeEEEEE--ecCC---CCCCceEEEeCCCCCcccccHH-------HHHHHhhc-c-ceEEeecCCCCCC
Q 024228 21 MTQRTIEIE-PGTILNIW--VPKK---TTKKHAVVLLHPFGFDGILTWQ-------FQVLALAK-T-YEVYVPDFLFFGS 85 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~--~~~~---~~~~~~vv~~hG~~~~~~~~~~-------~~~~~l~~-~-~~v~~~d~~g~G~ 85 (270)
++...+..+ +|..+.|+ .+.+ .++-|.|+++||.+++.. .|. .....+.. . ...+.+...+.+.
T Consensus 22 ~~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (255)
T d1jjfa_ 22 VVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSEN-DWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA 100 (255)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTT-TTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC
T ss_pred EEEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChH-HhhhhhHHHHHHHHHHHhhccCCcceeeeccccc
Confidence 344445443 67776654 4432 234588999999987765 442 11222221 1 2222222222222
Q ss_pred CCCCCCC---CChHHHHHHHHHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh
Q 024228 86 SVTDRPD---RTASFQAECMAKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 86 s~~~~~~---~~~~~~~~~~~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
....... ...+.+.+++...++.. +.++++++|+|+||..++.++.++|+++++++.+++..........
T Consensus 101 ~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~~-- 178 (255)
T d1jjfa_ 101 AGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERL-- 178 (255)
T ss_dssp CCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHHH--
T ss_pred ccccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCcccccc--
Confidence 2211111 12233455555555542 3457999999999999999999999999999998876543211100
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
... ..........|+++.+|++|..++. .+++.+.+. -+.++.
T Consensus 179 -------------~~~-------------------~~~~~~~~~~~~~i~~G~~D~~~~~--~~~~~~~L~~~g~~~~~~ 224 (255)
T d1jjfa_ 179 -------------FPD-------------------GGKAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYW 224 (255)
T ss_dssp -------------CTT-------------------TTHHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEE
T ss_pred -------------ccc-------------------HHHHhhccCCcceEEeCCCCCCchH--HHHHHHHHHHCCCCEEEE
Confidence 000 0011122227899999999998764 445555553 367899
Q ss_pred EecCCCcceeecchHhHHHHHHHHHH
Q 024228 235 SIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 235 ~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+++++||.... ..+.+.+||.
T Consensus 225 ~~~~ggH~~~~-----W~~~l~~fl~ 245 (255)
T d1jjfa_ 225 LIQGGGHDFNV-----WKPGLWNFLQ 245 (255)
T ss_dssp EETTCCSSHHH-----HHHHHHHHHH
T ss_pred EECCCCcCHHH-----HHHHHHHHHH
Confidence 99999997532 3344555663
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.57 E-value=1.4e-12 Score=97.73 Aligned_cols=129 Identities=11% Similarity=0.038 Sum_probs=89.0
Q ss_pred ceeEEEeec-CCeEEEEEecCCCCCCceEEEeCCCCCccc-ccHHH---HHHHhhcc-ceEEeecCCCCCCCCCCCC---
Q 024228 21 MTQRTIEIE-PGTILNIWVPKKTTKKHAVVLLHPFGFDGI-LTWQF---QVLALAKT-YEVYVPDFLFFGSSVTDRP--- 91 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~---~~~~l~~~-~~v~~~d~~g~G~s~~~~~--- 91 (270)
++...+..+ .|..+.+..+.+..+.|+|+++||.++... ..|.. +.+.+.+. +.+++++..+.+.......
T Consensus 9 v~~~~~~s~~~~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 88 (288)
T d1sfra_ 9 VEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPAC 88 (288)
T ss_dssp CEEEEEEETTTTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEE
T ss_pred EEEEEEECCCCCcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCccc
Confidence 344445444 677777766655567899999999876543 14433 34556666 8999999876554332211
Q ss_pred -------CCChHHHHHHHHHHHHH-h--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 92 -------DRTASFQAECMAKGLRK-L--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 92 -------~~~~~~~~~~~~~~l~~-~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
......+.+++...|++ + +.+++.+.|+|+||..|+.++.++|+++++++.+++....
T Consensus 89 ~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~ 156 (288)
T d1sfra_ 89 GKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (288)
T ss_dssp ETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred ccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcccc
Confidence 11233346666666654 2 4567999999999999999999999999999999987654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.49 E-value=1.3e-11 Score=92.00 Aligned_cols=126 Identities=16% Similarity=0.116 Sum_probs=85.4
Q ss_pred eeEEEeec-CCeEEEEEecCCCCCCceEEEeCCCCC--cccccHHH---HHHHhhcc-ceEEeecCCCCCCCCC------
Q 024228 22 TQRTIEIE-PGTILNIWVPKKTTKKHAVVLLHPFGF--DGILTWQF---QVLALAKT-YEVYVPDFLFFGSSVT------ 88 (270)
Q Consensus 22 ~~~~i~~~-~g~~l~~~~~~~~~~~~~vv~~hG~~~--~~~~~~~~---~~~~l~~~-~~v~~~d~~g~G~s~~------ 88 (270)
+..+|..+ -|..+.+...+. +.|+|+++||.++ +.. .|.. +.+.+.+. +.|+.+|-...+....
T Consensus 7 ~~~~~~s~~~~r~i~~~~~~~--~~p~lyllhG~~g~~d~~-~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~ 83 (280)
T d1dqza_ 7 EYLQVPSASMGRDIKVQFQGG--GPHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQ 83 (280)
T ss_dssp EEEEEEETTTTEEEEEEEECC--SSSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCT
T ss_pred EEEEEecccCCCcceEEeeCC--CCCEEEECCCCCCCCccc-hhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcc
Confidence 33344443 567777666543 5689999999865 334 6654 34556666 9999998532221110
Q ss_pred ---CCCCCCh-HHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 89 ---DRPDRTA-SFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 89 ---~~~~~~~-~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
....... ..+.+++...|+.. +.+++.+.|+||||+.|+.+|.++|+++++++.+++.....
T Consensus 84 ~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 84 SNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp TTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred cccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcc
Confidence 0111223 34567787777663 55679999999999999999999999999999999876543
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.48 E-value=1.3e-11 Score=91.27 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=86.9
Q ss_pred ceeEEEeec-CCeEEEEEecCCCCCCceEEEeCCCCCc--ccccHHH---HHHHhhcc-ceEEeecCCCCC-CCCCC-CC
Q 024228 21 MTQRTIEIE-PGTILNIWVPKKTTKKHAVVLLHPFGFD--GILTWQF---QVLALAKT-YEVYVPDFLFFG-SSVTD-RP 91 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~~~~~~~~~~~vv~~hG~~~~--~~~~~~~---~~~~l~~~-~~v~~~d~~g~G-~s~~~-~~ 91 (270)
+++.++..+ .|+.+.+..... ..|+|+++||.++. .. .|.. +.+.+.+. +.|+++|--..+ .+..+ ..
T Consensus 4 ~e~~~v~s~~~~r~~~~~v~~~--~~pvlylLhG~~g~~~~~-~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~ 80 (267)
T d1r88a_ 4 YENLMVPSPSMGRDIPVAFLAG--GPHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDG 80 (267)
T ss_dssp CEEEEEEETTTTEEEEEEEECC--SSSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCT
T ss_pred eEEEEEecccCCceeeEEEECC--CCCEEEEcCCCCCCCCcc-hhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccc
Confidence 455666654 677777666554 35899999997653 33 5654 34555555 889998842211 11111 12
Q ss_pred CCCh-HHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 92 DRTA-SFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 92 ~~~~-~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
.... ..+.+++..+|+.. +.+++.+.|+||||+.|+.+|.++|+++++++.+++.....
T Consensus 81 ~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~ 143 (267)
T d1r88a_ 81 SKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 143 (267)
T ss_dssp TCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred cccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCC
Confidence 2333 34566788777653 45689999999999999999999999999999999876643
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.48 E-value=3.6e-12 Score=99.33 Aligned_cols=126 Identities=12% Similarity=0.049 Sum_probs=85.9
Q ss_pred eEEEeecCCeEEEE--EecCCCCCCceEEEeCCCCCccc-----------ccHHHHHHHhhcc-ceEEeecCCCCCCCCC
Q 024228 23 QRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFGFDGI-----------LTWQFQVLALAKT-YEVYVPDFLFFGSSVT 88 (270)
Q Consensus 23 ~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~hG~~~~~~-----------~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~ 88 (270)
...|+..||++|+. +.+...++-|+||+.|+++.... .........|+++ |.|+.+|.||+|.|..
T Consensus 30 ~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 109 (385)
T d2b9va2 30 EVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 109 (385)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCC
Confidence 34466669999975 55555455678888787642110 0112234667777 9999999999999987
Q ss_pred CCCCCC---------hHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 89 DRPDRT---------ASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 89 ~~~~~~---------~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
...... ....++|..++++.+ ...+|.++|+|+||.+++.+|...|+.+++++...+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 110 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred ceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 542211 011245555555543 124799999999999999999999888999998877654
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.43 E-value=1.8e-12 Score=94.87 Aligned_cols=193 Identities=10% Similarity=0.083 Sum_probs=106.5
Q ss_pred ceeEEEeec-CCeEEEE--EecCC--CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc----ceEEeecCCCCCC-CCCC
Q 024228 21 MTQRTIEIE-PGTILNI--WVPKK--TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT----YEVYVPDFLFFGS-SVTD 89 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~--~~~~~--~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~----~~v~~~d~~g~G~-s~~~ 89 (270)
.++..+..+ .|.++.+ +.+.. ..+.|+||++||.+.... ..+..+.....+. +.++.++....+. ....
T Consensus 15 ~~~~~~~S~~lg~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~ 94 (246)
T d3c8da2 15 AKEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHEL 94 (246)
T ss_dssp CEEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHS
T ss_pred cEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeeccccccccccccc
Confidence 344444443 3555444 44432 234689999999553222 1333333444443 3333333221100 0000
Q ss_pred CCC-CChHHHHHHHHHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 90 RPD-RTASFQAECMAKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 90 ~~~-~~~~~~~~~~~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
... ...+.+.+++..+++.. +.+++.++|+|+||..|+.++.++|+++++++.+++..........
T Consensus 95 ~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~~-------- 166 (246)
T d3c8da2 95 PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQ-------- 166 (246)
T ss_dssp SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTSS--------
T ss_pred CccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCcc--------
Confidence 011 11233455666666653 2357999999999999999999999999999999987653221100
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCC
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAG 240 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~g 240 (270)
. ........... .......|+++.+|+.|..+ ....+.+++.+. -..++++++| |
T Consensus 167 ---------~-~~~~~~~~~~~----------~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~~~~G-g 224 (246)
T d3c8da2 167 ---------Q-EGVLLEKLKAG----------EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-G 224 (246)
T ss_dssp ---------S-CCHHHHHHHTT----------SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-C
T ss_pred ---------c-hHHHHHHhhhh----------hhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEEEeCC-C
Confidence 0 00000111000 01112278999999999866 466778887765 3568888987 7
Q ss_pred cce
Q 024228 241 HLV 243 (270)
Q Consensus 241 H~~ 243 (270)
|..
T Consensus 225 H~~ 227 (246)
T d3c8da2 225 HDA 227 (246)
T ss_dssp SCH
T ss_pred CCh
Confidence 855
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=8.8e-11 Score=93.40 Aligned_cols=127 Identities=14% Similarity=0.045 Sum_probs=90.0
Q ss_pred eeEEEeecCCeEEEEEecCCC---CCCceEEEeCCCCCcccccHHHHHHH------------------hhccceEEeecC
Q 024228 22 TQRTIEIEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLA------------------LAKTYEVYVPDF 80 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~------------------l~~~~~v~~~d~ 80 (270)
-.-++++.++..++||...+. .+.|.++++.|++|++. .|..+.+. +.+..+++.+|.
T Consensus 22 ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDq 100 (452)
T d1ivya_ 22 YSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLES 100 (452)
T ss_dssp EEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECC
T ss_pred eeeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEec
Confidence 345688888889988766543 35789999999999988 77554321 223378999998
Q ss_pred C-CCCCCCCCCCC--CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhC----ccccccEEEeccc
Q 024228 81 L-FFGSSVTDRPD--RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY----PDLVESMVVTCSV 146 (270)
Q Consensus 81 ~-g~G~s~~~~~~--~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~i~~~~~ 146 (270)
| |.|.|...... .+..+.+.|+.+++..+ ...+++|.|-|+||..+-.+|... .-.++++++.++.
T Consensus 101 PvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~ 180 (452)
T d1ivya_ 101 PAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp STTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCc
Confidence 6 99999654432 45566666665555432 345899999999999887777542 2358999999887
Q ss_pred CCC
Q 024228 147 MGL 149 (270)
Q Consensus 147 ~~~ 149 (270)
...
T Consensus 181 ~d~ 183 (452)
T d1ivya_ 181 SSY 183 (452)
T ss_dssp SBH
T ss_pred cCc
Confidence 653
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.37 E-value=1.1e-10 Score=91.92 Aligned_cols=125 Identities=12% Similarity=0.017 Sum_probs=87.7
Q ss_pred eEEEeecC-CeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHHH-----------------hhccceEEeecCC
Q 024228 23 QRTIEIEP-GTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVLA-----------------LAKTYEVYVPDFL 81 (270)
Q Consensus 23 ~~~i~~~~-g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~-----------------l~~~~~v~~~d~~ 81 (270)
.-++++.+ +..++||...+ ....|.||++.|++|++. .|..+.+. ..+..+++.+|.|
T Consensus 18 sGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS-~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~P 96 (421)
T d1wpxa1 18 TGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS-LTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQP 96 (421)
T ss_dssp EEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCS
T ss_pred eeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHH-HHHHHHhcCCcEECCCCccccCCcccccccCEEEEecC
Confidence 35677754 57888875443 245799999999999988 77555421 2233789999955
Q ss_pred -CCCCCCCCC-CCCChHHHHHHHHHHHHHh---------CCCceEEEEEchhHHHHHHHHhhC------ccccccEEEec
Q 024228 82 -FFGSSVTDR-PDRTASFQAECMAKGLRKL---------GVEKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTC 144 (270)
Q Consensus 82 -g~G~s~~~~-~~~~~~~~~~~~~~~l~~~---------~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~i~~~ 144 (270)
|.|.|.... ...+....++|+.++++.+ ...+++|.|-|+||..+-.+|.+- +-.++++++.+
T Consensus 97 vGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGn 176 (421)
T d1wpxa1 97 VNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGN 176 (421)
T ss_dssp TTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEES
T ss_pred CCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecC
Confidence 999996433 3356666777777766542 335899999999999887777542 12478999988
Q ss_pred ccCC
Q 024228 145 SVMG 148 (270)
Q Consensus 145 ~~~~ 148 (270)
+...
T Consensus 177 g~~d 180 (421)
T d1wpxa1 177 GLTD 180 (421)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 8765
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.32 E-value=1.9e-12 Score=94.65 Aligned_cols=102 Identities=15% Similarity=0.033 Sum_probs=73.0
Q ss_pred ceEEEeCCCCCccc--ccHHHHHHHhhcc---ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHh--CCCceEEE
Q 024228 46 HAVVLLHPFGFDGI--LTWQFQVLALAKT---YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKL--GVEKCTLV 117 (270)
Q Consensus 46 ~~vv~~hG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~l~ 117 (270)
.|||++||++++.. ..|..+.+.|.+. +.|+++++.....+.... ......+.++.+.+.|+.. ..+++.+|
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~~~~v~lV 85 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYNAM 85 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEEEE
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccccccceeEE
Confidence 48999999987643 2577777777654 789999976433221111 1134566677777666643 24589999
Q ss_pred EEchhHHHHHHHHhhCcc-ccccEEEecccC
Q 024228 118 GVSYGGMVGFKMAEMYPD-LVESMVVTCSVM 147 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~ 147 (270)
|||+||.++-.++.+.++ .|..+|.++++.
T Consensus 86 GhSqGGLiaR~~i~~~~~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 86 GFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence 999999999999999875 599999998864
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.31 E-value=4e-11 Score=88.51 Aligned_cols=188 Identities=12% Similarity=0.079 Sum_probs=101.5
Q ss_pred ceeEEEeecCC-eEEEEE--ecCC---CCCCceEEEeCCCCCcccccHHHHHHHhhc-c-ceEEeecCCCCCCCCC----
Q 024228 21 MTQRTIEIEPG-TILNIW--VPKK---TTKKHAVVLLHPFGFDGILTWQFQVLALAK-T-YEVYVPDFLFFGSSVT---- 88 (270)
Q Consensus 21 ~~~~~i~~~~g-~~l~~~--~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~-~~v~~~d~~g~G~s~~---- 88 (270)
++...+...+| ..+.++ .+.+ .++-|+|+++||...... ....+...+.. . +.|+++++++...-..
T Consensus 13 ~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~-~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~ 91 (265)
T d2gzsa1 13 FSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR-LDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRA 91 (265)
T ss_dssp EEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH-CCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHH
T ss_pred eEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhh-HHHHHHHHHHhcCCCeEEEecCCCCCcCcccccc
Confidence 45566666666 456554 3433 123478999999543322 22223333333 3 8888888876532100
Q ss_pred -----------C--------CCCCChHHH----HHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEE
Q 024228 89 -----------D--------RPDRTASFQ----AECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142 (270)
Q Consensus 89 -----------~--------~~~~~~~~~----~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~ 142 (270)
. ......+.+ ..++...++.. +..++.++|+|+||..++.++.+ ++.+.+++.
T Consensus 92 ~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a 170 (265)
T d2gzsa1 92 YDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYS 170 (265)
T ss_dssp HHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEE
T ss_pred cccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccCEEEE
Confidence 0 000111222 22233333321 23468999999999999987665 456888887
Q ss_pred ecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCC--------Ccc
Q 024228 143 TCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGEN--------DKI 214 (270)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~--------D~~ 214 (270)
.+|......... ...... ... ......|+++.+|+. |..
T Consensus 171 ~s~~~~~~~~~~------------------------~~~~~~--~~~-------~~~~~~~~~~~~g~~~~~~~~~~d~~ 217 (265)
T d2gzsa1 171 ASPSLGRGYDAL------------------------LSRVTA--VEP-------LQFCTKHLAIMEGSATQGDNRETHAV 217 (265)
T ss_dssp ESGGGSTTHHHH------------------------HHHHHT--SCT-------TTTTTCEEEEEECCC-----------
T ss_pred ECCcccccchhh------------------------hhcccc--ccc-------cccCCCcEEEEcCCcccccccccccc
Confidence 776543221100 000000 000 011115777777766 555
Q ss_pred CCHHHHHHHHHHhc---CCceEEEecCCCcce
Q 024228 215 FDMQVARNLKEQVG---QNATMESIEKAGHLV 243 (270)
Q Consensus 215 ~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~ 243 (270)
++.+..+.+.+.+. .++++.++||++|..
T Consensus 218 ~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 218 GVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP 249 (265)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred hhHHHHHHHHHHHHHCCCCEEEEEcCCCCcch
Confidence 67777777777665 467899999999964
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.25 E-value=5.1e-10 Score=83.37 Aligned_cols=104 Identities=12% Similarity=0.037 Sum_probs=67.3
Q ss_pred CceEEEeCCCCCcccccHHHH--H-HHhhcc-ceEEeecCCCC----------------CCCCCCCC-------CCC-hH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQ--V-LALAKT-YEVYVPDFLFF----------------GSSVTDRP-------DRT-AS 96 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~--~-~~l~~~-~~v~~~d~~g~----------------G~s~~~~~-------~~~-~~ 96 (270)
-|+|+++||.+++.. .|... + +...+. ..++.++.... +.+..... ... .+
T Consensus 49 yPVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp BCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHH
T ss_pred CCEEEEcCCCCCCHH-HHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHH
Confidence 589999999999887 77543 2 333333 77777764221 11111110 011 23
Q ss_pred HHHHHHHHHHHHh-CC---------CceEEEEEchhHHHHHHHHhhC--ccccccEEEecccCCC
Q 024228 97 FQAECMAKGLRKL-GV---------EKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMGL 149 (270)
Q Consensus 97 ~~~~~~~~~l~~~-~~---------~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~~ 149 (270)
.+.+++..+++.. .. ++..|.|+||||.-|+.+|.++ |++..++...++....
T Consensus 128 ~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~~ 192 (299)
T d1pv1a_ 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNP 192 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCCS
T ss_pred HHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCCc
Confidence 4566777777653 21 4689999999999999999864 7888888888876654
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.25 E-value=4.1e-12 Score=94.92 Aligned_cols=107 Identities=13% Similarity=0.040 Sum_probs=73.3
Q ss_pred CCCceEEEeCCCCCcccccHH-HHHH-Hhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CCCc
Q 024228 43 TKKHAVVLLHPFGFDGILTWQ-FQVL-ALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------GVEK 113 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~-~~~~-~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~------~~~~ 113 (270)
.++|+++++||+.++....|. .+.. .|... ++|+++|+...................+.+..+|+.+ ..++
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPEN 147 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 468999999999887763443 3443 45555 9999999974321110001122333344444444432 3578
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
++|+|||+||.+|-.++...+.+|.+++.++|+.+.
T Consensus 148 vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 148 VHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred eEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 999999999999999999888899999999998764
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.22 E-value=6e-12 Score=94.20 Aligned_cols=106 Identities=14% Similarity=0.085 Sum_probs=69.3
Q ss_pred CCCceEEEeCCCCCcccccHH-HHHH-Hhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH----Hh--CCCc
Q 024228 43 TKKHAVVLLHPFGFDGILTWQ-FQVL-ALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR----KL--GVEK 113 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~-~~~~-~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~----~~--~~~~ 113 (270)
.++|++|++||+.++....|. .+.. .|... ++|+++|+.............+.....+.+..+|+ .. ..++
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 468999999999887773444 3444 45545 99999999742211000000122233344444444 33 3568
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
++|+|||+||.+|..++.+. .++.+++.++|+.+.
T Consensus 148 vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 148 VQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPVEAS 182 (337)
T ss_dssp EEEEEETHHHHHHHHHHHTS-TTCCEEEEESCCCTT
T ss_pred eEEEeecHHHhhhHHHHHhh-ccccceeccCCCccc
Confidence 99999999999998666554 579999999998764
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.19 E-value=3.6e-09 Score=78.03 Aligned_cols=124 Identities=16% Similarity=0.070 Sum_probs=75.7
Q ss_pred ceeEEEeecCCe-EEEEEecCC---CCCCceEEEeCCCCCcccccH-------HHHHHHh----hc-cceEEeecCCCCC
Q 024228 21 MTQRTIEIEPGT-ILNIWVPKK---TTKKHAVVLLHPFGFDGILTW-------QFQVLAL----AK-TYEVYVPDFLFFG 84 (270)
Q Consensus 21 ~~~~~i~~~~g~-~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~-------~~~~~~l----~~-~~~v~~~d~~g~G 84 (270)
++...++..+|. .+.++.+.+ .++-|+|+++||.+++.. .| ..+...+ .. .+.++.++..+.+
T Consensus 27 v~~~~~~~~~~~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 105 (273)
T d1wb4a1 27 IVKETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENEN-TIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGN 105 (273)
T ss_dssp EEEEEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTT-STTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTT
T ss_pred EEEEEEecCCCeEEEEEEeCCCCCCCCCceEEEEEeCCCCCcc-hhhhhccchhHHHHhhhhhhccCCceeeccccCCCC
Confidence 555566655553 345566653 233588999999987655 22 1222222 12 2677777766433
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHH---------------hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 85 SSVTDRPDRTASFQAECMAKGLRK---------------LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 85 ~s~~~~~~~~~~~~~~~~~~~l~~---------------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.... ........++...++. .+.+++.+.|+|+||..++.+|.++|+++.+++.+++....
T Consensus 106 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~ 181 (273)
T d1wb4a1 106 CTAQ----NFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 181 (273)
T ss_dssp CCTT----THHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred Cccc----cchhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccccc
Confidence 2211 1122222222222221 24467999999999999999999999999999999887543
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.16 E-value=2.5e-10 Score=85.43 Aligned_cols=125 Identities=17% Similarity=0.110 Sum_probs=73.1
Q ss_pred CCceEEEEEchhHHHHHHHHhhCccccccEE-EecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPDLVESMV-VTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (270)
.+++.+.|+|+||++|+.++..+|+.+++.+ ++++...... ......... ........... ....... ..
T Consensus 10 p~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca-~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~-~~ 80 (318)
T d2d81a1 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCA-RNQYYTSCM-----YNGYPSITTPT--ANMKSWS-GN 80 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTT-SSSCGGGGS-----TTCCCCCHHHH--HHHHHHB-TT
T ss_pred ccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhh-cccchHHHh-----hcCCCCCcChh--HHHHHHh-hc
Confidence 4589999999999999999999999997543 4443322110 000000000 00000000010 0011000 11
Q ss_pred CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-----CCceEEEecCCCcceeec
Q 024228 190 PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-----QNATMESIEKAGHLVNLE 246 (270)
Q Consensus 190 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~ 246 (270)
. ..........|+++++|++|..||++.++.+.+.+. .+.+++..+++||.+..+
T Consensus 81 ~--i~~~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 81 Q--IASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp T--BCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred C--CcchhccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCC
Confidence 1 111112223799999999999999999999998875 135678889999998653
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=99.13 E-value=3.4e-09 Score=84.52 Aligned_cols=116 Identities=14% Similarity=0.011 Sum_probs=77.3
Q ss_pred eEEEEEecCC--C---CCCceEEEeCCCCCcccccHHHHHHH-----------------hhccceEEeecCC-CCCCCCC
Q 024228 32 TILNIWVPKK--T---TKKHAVVLLHPFGFDGILTWQFQVLA-----------------LAKTYEVYVPDFL-FFGSSVT 88 (270)
Q Consensus 32 ~~l~~~~~~~--~---~~~~~vv~~hG~~~~~~~~~~~~~~~-----------------l~~~~~v~~~d~~-g~G~s~~ 88 (270)
..+.||.... . ...|.+|++.|++|++. .+..+.+. ..+..+++.+|.| |.|.|..
T Consensus 49 ~~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS-~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~ 127 (483)
T d1ac5a_ 49 LEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CEEEEEEEECSCSGGGSSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred ceEEEEEEEecCCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeec
Confidence 4566654322 1 12489999999999987 66544311 1233789999975 8999964
Q ss_pred CCC----------CCChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhC------------cccccc
Q 024228 89 DRP----------DRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY------------PDLVES 139 (270)
Q Consensus 89 ~~~----------~~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~------------p~~v~~ 139 (270)
... ..+.++.+.++..+++.. ...+++|.|-|+||..+-.+|... +-.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkG 207 (483)
T d1ac5a_ 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred CCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCccccee
Confidence 321 245556677776666542 345899999999998887777542 114888
Q ss_pred EEEecccCC
Q 024228 140 MVVTCSVMG 148 (270)
Q Consensus 140 ~i~~~~~~~ 148 (270)
+.+.++...
T Consensus 208 i~IGNg~~d 216 (483)
T d1ac5a_ 208 LLIGNGWID 216 (483)
T ss_dssp EEEEEECCC
T ss_pred eeecCCccC
Confidence 888877654
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.64 E-value=5.2e-08 Score=74.34 Aligned_cols=98 Identities=18% Similarity=0.105 Sum_probs=71.0
Q ss_pred CCCceEEEeCCCCCccc------ccHHH----HHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh--
Q 024228 43 TKKHAVVLLHPFGFDGI------LTWQF----QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-- 109 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~------~~~~~----~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~-- 109 (270)
.++-||||+||+.+-.. .+|.. +.+.|.+. +.|++..... ..+.++-++.+...|+..
T Consensus 5 ~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p---------~~S~~~RA~eL~~~I~~~~~ 75 (388)
T d1ku0a_ 5 ANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---------LSSNWDRACEAYAQLVGGTV 75 (388)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCS---------SBCHHHHHHHHHHHHHCEEE
T ss_pred CCCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCC---------ccCHHHHHHHHHHHHhhhhh
Confidence 35678999999865421 35653 66778777 9999988752 245667777787777642
Q ss_pred --C-------------------------CCceEEEEEchhHHHHHHHHhhCcc-------------------------cc
Q 024228 110 --G-------------------------VEKCTLVGVSYGGMVGFKMAEMYPD-------------------------LV 137 (270)
Q Consensus 110 --~-------------------------~~~~~l~G~S~Gg~~a~~~a~~~p~-------------------------~v 137 (270)
+ ..+|.||||||||..+-.++...|+ .|
T Consensus 76 d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V 155 (388)
T d1ku0a_ 76 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFV 155 (388)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcce
Confidence 1 2489999999999999888765432 58
Q ss_pred ccEEEecccCCC
Q 024228 138 ESMVVTCSVMGL 149 (270)
Q Consensus 138 ~~~i~~~~~~~~ 149 (270)
+.+..++++...
T Consensus 156 ~SvTTIsTPH~G 167 (388)
T d1ku0a_ 156 LSVTTIATPHDG 167 (388)
T ss_dssp EEEEEESCCTTC
T ss_pred EEEEeccCCCCC
Confidence 999999877543
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.21 E-value=4.3e-06 Score=66.49 Aligned_cols=122 Identities=16% Similarity=0.122 Sum_probs=74.2
Q ss_pred ecCCeEEEEEecCCCC-CCceEEEeCCCCCccc--ccHHH-HHHHhhcc-ceEEeecCC----CCCCCCC----CCCCCC
Q 024228 28 IEPGTILNIWVPKKTT-KKHAVVLLHPFGFDGI--LTWQF-QVLALAKT-YEVYVPDFL----FFGSSVT----DRPDRT 94 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~--~~~~~-~~~~l~~~-~~v~~~d~~----g~G~s~~----~~~~~~ 94 (270)
.+|...|.++.+.... +.|++|++||++.... ..+.. ....+.++ .-|++++|| |+-.... .+..+.
T Consensus 78 sEDCL~lni~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~G 157 (483)
T d1qe3a_ 78 SEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 157 (483)
T ss_dssp CSCCCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHH
T ss_pred CCcCCEEEEEECCCCCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccc
Confidence 3477888988886543 4589999999864322 02211 12333444 999999998 3321111 122333
Q ss_pred hHHHH---HHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccCCC
Q 024228 95 ASFQA---ECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMGL 149 (270)
Q Consensus 95 ~~~~~---~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~~ 149 (270)
+.+.. +.+.+-|..+| .++|.|+|+|.||..+...+... ...++++|+.++....
T Consensus 158 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~ 219 (483)
T d1qe3a_ 158 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRT 219 (483)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCC
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCccc
Confidence 43433 33444444555 35799999999998877665432 2478999998876543
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.16 E-value=7.9e-06 Score=65.74 Aligned_cols=119 Identities=17% Similarity=0.102 Sum_probs=72.4
Q ss_pred cCCeEEEEEecCCC-CCCceEEEeCCCCCccc----ccHHHHHHHhhcc-ceEEeecCC----CCCCCC---CCCCCCCh
Q 024228 29 EPGTILNIWVPKKT-TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT-YEVYVPDFL----FFGSSV---TDRPDRTA 95 (270)
Q Consensus 29 ~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~-~~v~~~d~~----g~G~s~---~~~~~~~~ 95 (270)
+|...|.+|.+... .+.|++|++||++.... ..+.. ...+.++ .-||++++| |+-... .......+
T Consensus 89 EDCL~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~-~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl 167 (532)
T d1ea5a_ 89 EDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNG-KYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 167 (532)
T ss_dssp SCCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCT-HHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHH
T ss_pred ccCCEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccCc-chhhcccCccEEEEeeccccccccccccccCCCCcccc
Confidence 47888999987653 45699999999763221 12222 2223333 999999998 332221 12223334
Q ss_pred HHHH---HHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccCC
Q 024228 96 SFQA---ECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMG 148 (270)
Q Consensus 96 ~~~~---~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~ 148 (270)
.+.. +++.+-|..+| .++|.|+|+|.||..+...+... ...+.++|+.++...
T Consensus 168 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 168 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 4433 33444445555 35799999999997766554431 246889998876654
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.10 E-value=1.2e-05 Score=64.46 Aligned_cols=120 Identities=16% Similarity=0.127 Sum_probs=71.5
Q ss_pred cCCeEEEEEecCCC-CCCceEEEeCCCCCccc--ccHHHHHHHh-hc-cceEEeecCC----CCCCCC---CCCCCCChH
Q 024228 29 EPGTILNIWVPKKT-TKKHAVVLLHPFGFDGI--LTWQFQVLAL-AK-TYEVYVPDFL----FFGSSV---TDRPDRTAS 96 (270)
Q Consensus 29 ~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~--~~~~~~~~~l-~~-~~~v~~~d~~----g~G~s~---~~~~~~~~~ 96 (270)
+|...|.+|.+... ++.|++|++||++.... .....-...+ ++ ..-|+.+++| |+-... .......+.
T Consensus 87 EDCL~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~ 166 (526)
T d1p0ia_ 87 EDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLF 166 (526)
T ss_dssp SCCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHH
T ss_pred CcCCEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCccccccccccc
Confidence 47888999988764 34589999999874322 0111111222 23 3999999998 222211 112233343
Q ss_pred HHH---HHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 97 FQA---ECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 97 ~~~---~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
+.. +++.+-|+.++ .++|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 167 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 167 DQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred chhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 333 33444445555 3579999999999887554432 2346888888876643
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=2.4e-05 Score=62.87 Aligned_cols=119 Identities=19% Similarity=0.142 Sum_probs=72.5
Q ss_pred cCCeEEEEEecCCC---CCCceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCC----CCCCCCCC--CCCCChH
Q 024228 29 EPGTILNIWVPKKT---TKKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFL----FFGSSVTD--RPDRTAS 96 (270)
Q Consensus 29 ~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~----g~G~s~~~--~~~~~~~ 96 (270)
+|...|.+|.+... .+.|++|++||++.... ..+.. ...++++ .-||+++|| |+-.+... .....+.
T Consensus 94 EDCL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~-~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~ 172 (532)
T d2h7ca1 94 EDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHL 172 (532)
T ss_dssp SCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHH
T ss_pred CcCCEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCc-hhhhhcCceEEEEEeeccCCCccccccccccccccccH
Confidence 48889999988542 23589999999874333 13322 2233344 999999998 33222211 2223333
Q ss_pred HHH---HHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 97 FQA---ECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 97 ~~~---~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
+.. +++.+-|..+| .++|.|+|+|.||..+...+.. ....++++|+.++...
T Consensus 173 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 173 DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 333 33444444555 3579999999999777665543 2346889998886543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.05 E-value=2.4e-05 Score=63.01 Aligned_cols=119 Identities=14% Similarity=0.090 Sum_probs=72.1
Q ss_pred cCCeEEEEEecCCC--CCCceEEEeCCCCCc---cc-ccHHHHHHHhhc-cceEEeecCC----CCCCCC---CCCCCCC
Q 024228 29 EPGTILNIWVPKKT--TKKHAVVLLHPFGFD---GI-LTWQFQVLALAK-TYEVYVPDFL----FFGSSV---TDRPDRT 94 (270)
Q Consensus 29 ~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~---~~-~~~~~~~~~l~~-~~~v~~~d~~----g~G~s~---~~~~~~~ 94 (270)
+|...|.++.+... .+.|++|++||++.. .. ..+... ...++ ..-|+++++| |+-.+. .......
T Consensus 94 EDCL~LnI~~P~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~-~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~G 172 (542)
T d2ha2a1 94 EDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGR-FLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG 172 (542)
T ss_dssp SCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTH-HHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH
T ss_pred CcCCEEEEEecCCCCCCCCcEEEEEEECccccccCcccccCch-hhhhhccceeEeeeeeccceeeecccccccCCCcCC
Confidence 47888999987643 345899999997632 22 122221 12223 3999999999 442222 1122233
Q ss_pred hHHHH---HHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccCC
Q 024228 95 ASFQA---ECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMG 148 (270)
Q Consensus 95 ~~~~~---~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~ 148 (270)
+.+.. +++.+-|..+| .++|.|+|+|.||..+...+... ...+.++|+.++...
T Consensus 173 l~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred cccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 33333 33444444555 35799999999998877655532 246888898877543
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.97 E-value=2e-05 Score=63.03 Aligned_cols=120 Identities=14% Similarity=0.114 Sum_probs=70.0
Q ss_pred cCCeEEEEEecCCC---CCCceEEEeCCCCCccc--ccHHHHHHHhh-cc-ceEEeecCCC----CCCCCC----CCCCC
Q 024228 29 EPGTILNIWVPKKT---TKKHAVVLLHPFGFDGI--LTWQFQVLALA-KT-YEVYVPDFLF----FGSSVT----DRPDR 93 (270)
Q Consensus 29 ~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~--~~~~~~~~~l~-~~-~~v~~~d~~g----~G~s~~----~~~~~ 93 (270)
+|...|.+|.+... .+.|++|++||++.... ..+..-...++ ++ .-|+.++||- +-.+.. .....
T Consensus 78 EDCL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~ 157 (517)
T d1ukca_ 78 EDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNA 157 (517)
T ss_dssp SCCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTH
T ss_pred CcCCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccch
Confidence 47888999987642 23489999999763332 12222122222 33 7889999982 211110 01122
Q ss_pred ChHHH---HHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhh----CccccccEEEecccCC
Q 024228 94 TASFQ---AECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM----YPDLVESMVVTCSVMG 148 (270)
Q Consensus 94 ~~~~~---~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~i~~~~~~~ 148 (270)
.+.+. .+.+.+-|..++ .++|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 158 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 158 GLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 33333 233444444555 3579999999999776544332 2247899999887644
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=97.92 E-value=3.5e-05 Score=62.06 Aligned_cols=120 Identities=16% Similarity=0.085 Sum_probs=71.5
Q ss_pred ecCCeEEEEEecCCC---CCCceEEEeCCCCCcccc--cH--HHH-HHHhh-cc-ceEEeecCC----CCCCCCC----C
Q 024228 28 IEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGIL--TW--QFQ-VLALA-KT-YEVYVPDFL----FFGSSVT----D 89 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~--~~--~~~-~~~l~-~~-~~v~~~d~~----g~G~s~~----~ 89 (270)
.+|...|.+|.+... .+.|++|++||++..... .+ ..+ ...++ ++ .-|+++++| |+-.... .
T Consensus 102 sEDCL~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~ 181 (544)
T d1thga_ 102 NEDCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEG 181 (544)
T ss_dssp CSCCCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT
T ss_pred CCcCCEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccc
Confidence 347889999987532 345899999998754331 11 222 23343 33 999999998 2322111 1
Q ss_pred CCCCChHHHH---HHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhh--------CccccccEEEecccC
Q 024228 90 RPDRTASFQA---ECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--------YPDLVESMVVTCSVM 147 (270)
Q Consensus 90 ~~~~~~~~~~---~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~i~~~~~~ 147 (270)
+....+.++. +++.+-|..++ .++|.|+|+|.||..+...+.. ....+.++|+.++..
T Consensus 182 ~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 182 NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred cccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 1233333333 33344444454 3579999999999766554432 124789999988653
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.90 E-value=4.8e-05 Score=61.08 Aligned_cols=119 Identities=17% Similarity=0.149 Sum_probs=69.9
Q ss_pred cCCeEEEEEecCCC---CCCceEEEeCCCCCccc--ccH--HHHH-HH-hhcc-ceEEeecCCC----CCCCC----CCC
Q 024228 29 EPGTILNIWVPKKT---TKKHAVVLLHPFGFDGI--LTW--QFQV-LA-LAKT-YEVYVPDFLF----FGSSV----TDR 90 (270)
Q Consensus 29 ~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~--~~~--~~~~-~~-l~~~-~~v~~~d~~g----~G~s~----~~~ 90 (270)
+|...|.+|.+... .+.|++|++||++.... ..| ..+. .. +.++ .-||++++|- +-..+ ..+
T Consensus 95 EDCL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~ 174 (534)
T d1llfa_ 95 EDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGS 174 (534)
T ss_dssp SCCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTC
T ss_pred CcCCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccc
Confidence 47889999987432 45689999999874332 122 2232 22 3344 9999999992 22111 011
Q ss_pred CCCChHHHH---HHHHHHHHHhC--CCceEEEEEchhHHHHH-HHHhhC-------ccccccEEEecccC
Q 024228 91 PDRTASFQA---ECMAKGLRKLG--VEKCTLVGVSYGGMVGF-KMAEMY-------PDLVESMVVTCSVM 147 (270)
Q Consensus 91 ~~~~~~~~~---~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~-~~a~~~-------p~~v~~~i~~~~~~ 147 (270)
....+.+.. +++.+-|..++ .++|.|+|+|.||..+. .++... ...++++|+.++..
T Consensus 175 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred cccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 222333332 33444444554 35799999999998654 443221 13589999988653
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.81 E-value=7.1e-05 Score=60.71 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=70.8
Q ss_pred ecCCeEEEEEecCCC----CCCceEEEeCCCCCcccc--c--HH--HH--HHHhhc-c-ceEEeecCC----CCCCC--C
Q 024228 28 IEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGIL--T--WQ--FQ--VLALAK-T-YEVYVPDFL----FFGSS--V 87 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~--~--~~--~~--~~~l~~-~-~~v~~~d~~----g~G~s--~ 87 (270)
.+|...|.+|.+... .+.|++|++||++..... . +. .+ ...|+. + .-||.++|| |+-.+ .
T Consensus 77 sEDCL~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~ 156 (579)
T d2bcea_ 77 NEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDS 156 (579)
T ss_dssp CSCCCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSST
T ss_pred CCcCCEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeeccccccccccccccc
Confidence 347888999887431 235899999998642220 1 10 01 123333 3 889999998 32211 1
Q ss_pred CCCCCCChHHHHH---HHHHHHHHhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccC
Q 024228 88 TDRPDRTASFQAE---CMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVM 147 (270)
Q Consensus 88 ~~~~~~~~~~~~~---~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~ 147 (270)
..+..+.+.+... ++.+-|..+| .++|.|+|+|.||..+...+.. ....++++|+.++..
T Consensus 157 ~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 157 NLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred CCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 1223334444433 3444455555 3479999999999777654432 235789999988654
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.62 E-value=0.00011 Score=59.48 Aligned_cols=103 Identities=17% Similarity=0.004 Sum_probs=58.4
Q ss_pred CCceEEEeCCCCCccc----ccHHHHHHHh-hcc-ceEEeecCCC----CCCC---------CCCCCCCChHHHHHHH--
Q 024228 44 KKHAVVLLHPFGFDGI----LTWQFQVLAL-AKT-YEVYVPDFLF----FGSS---------VTDRPDRTASFQAECM-- 102 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~----~~~~~~~~~l-~~~-~~v~~~d~~g----~G~s---------~~~~~~~~~~~~~~~~-- 102 (270)
+.|++|++||++.... ..|.. ..| ++. .-||+++||- +-.. ........+.+....|
T Consensus 138 ~lPV~V~ihGG~f~~Gs~~~~~~~~--~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~W 215 (571)
T d1dx4a_ 138 GLPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 215 (571)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCccCCCCcccccch--hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHH
Confidence 4589999999863221 12222 233 333 8889999982 2111 1111233333333333
Q ss_pred -HHHHHHhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 103 -AKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 103 -~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
.+-|..+| .++|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 216 V~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 216 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 33333444 3589999999999877655443 2346888888776544
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.83 E-value=0.001 Score=47.83 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=22.7
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.+.++..+..++++.|||+||.+|..+|..
T Consensus 123 ~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 123 LDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 334444456689999999999999887754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.82 E-value=0.001 Score=47.72 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=21.5
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+++..+..++++.|||+||.+|..+|..
T Consensus 126 ~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 126 QLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHhhCCCceEEEEecccchHHHHHHHHH
Confidence 3333445689999999999999888764
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.80 E-value=0.0015 Score=46.78 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+..+++..+..++++.|||+||.+|..++..
T Consensus 115 i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 3333444455589999999999999887765
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.74 E-value=0.0013 Score=47.34 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=22.6
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
..+++.....++++.|||+||.+|..++..
T Consensus 129 ~~~~~~~~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 129 EDAVREHPDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhCCCcceeeeccchHHHHHHHHHHH
Confidence 333334445589999999999999988865
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.70 E-value=0.001 Score=47.94 Aligned_cols=25 Identities=24% Similarity=0.093 Sum_probs=20.3
Q ss_pred hCCCceEEEEEchhHHHHHHHHhhC
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
....++++.|||+||.+|..++...
T Consensus 134 ~~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 134 NPNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred CCCceEEEeccchHHHHHHHHHHHH
Confidence 3445899999999999999887653
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=96.07 E-value=0.031 Score=38.15 Aligned_cols=75 Identities=11% Similarity=-0.036 Sum_probs=43.3
Q ss_pred ceEEeecCCCCCCCCCCCC-C--CChHHHHHHHHHHH----HHhCCCceEEEEEchhHHHHHHHHhhC------------
Q 024228 73 YEVYVPDFLFFGSSVTDRP-D--RTASFQAECMAKGL----RKLGVEKCTLVGVSYGGMVGFKMAEMY------------ 133 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~-~--~~~~~~~~~~~~~l----~~~~~~~~~l~G~S~Gg~~a~~~a~~~------------ 133 (270)
..+..++||..-....... . .+...=+.++...+ ++-...+++|+|+|.|+.++..++...
T Consensus 36 ~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~ 115 (207)
T d1qoza_ 36 TTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAV 115 (207)
T ss_dssp EEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSC
T ss_pred CeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCCC
Confidence 5667788886533211111 1 11122233333333 333556999999999999998876421
Q ss_pred ------ccccccEEEecccC
Q 024228 134 ------PDLVESMVVTCSVM 147 (270)
Q Consensus 134 ------p~~v~~~i~~~~~~ 147 (270)
.++|.++++++-+.
T Consensus 116 ~l~~~~~~~V~avvl~GdP~ 135 (207)
T d1qoza_ 116 PLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp CSCHHHHHHEEEEEEESCTT
T ss_pred CCChhhhhcEEEEEEEeCCC
Confidence 13678888886443
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=95.90 E-value=0.042 Score=37.48 Aligned_cols=75 Identities=15% Similarity=0.088 Sum_probs=43.2
Q ss_pred ceEEeecCCCCCCCCCCCC-C--CChHHHHHHHHHHHH----HhCCCceEEEEEchhHHHHHHHHhhC------------
Q 024228 73 YEVYVPDFLFFGSSVTDRP-D--RTASFQAECMAKGLR----KLGVEKCTLVGVSYGGMVGFKMAEMY------------ 133 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~-~--~~~~~~~~~~~~~l~----~~~~~~~~l~G~S~Gg~~a~~~a~~~------------ 133 (270)
-.+..++||.......... . .+..+=+..+...|. +-...+++|+|+|.|+.++-.++...
T Consensus 36 ~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~ 115 (207)
T d1g66a_ 36 STAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAV 115 (207)
T ss_dssp CEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSC
T ss_pred CeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCcccccccccc
Confidence 5677888886432211111 1 122222333333333 33556999999999999998876421
Q ss_pred ------ccccccEEEecccC
Q 024228 134 ------PDLVESMVVTCSVM 147 (270)
Q Consensus 134 ------p~~v~~~i~~~~~~ 147 (270)
.++|.++++++-+.
T Consensus 116 ~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 116 QLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp CSCHHHHHHEEEEEEESCTT
T ss_pred CCCchhhhceeeEEEecCCC
Confidence 13577788877543
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=95.85 E-value=0.016 Score=39.25 Aligned_cols=49 Identities=14% Similarity=0.007 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc----cccccEEEeccc
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP----DLVESMVVTCSV 146 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~i~~~~~ 146 (270)
+...+.++.++-...+++|+|+|.|+.++-.++...+ ++|.++++++-+
T Consensus 82 ~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 82 MLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 3444455555555679999999999999998887653 478999988754
|