Citrus Sinensis ID: 024280

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHccccccccccccccccccccccccccHHHcccccccccccccccccccccccHHHHHHHccccccEEEEEEcccccccccHHHHHHHccccccEEEEcccccccccccccccccHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHccccEEEccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEccccccccHHHHHHHHHccccEEEccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHccccEEEEcccccHHHcccccccccccccccHHcccccHHHHccccccccccccccccccccccccccHHHHHHHcccccEEEEEcccccccccccHHHHHHHcEccccEEcccccccccccccccccccHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHcccccEEEEccHHHHHHHcccccEccccccHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHccHHHHHHHHHccccEEEEcccccc
Coil and Loop (DISEMBL)
MASSLFTRRLVHSSFSISYKPQVFTSLLNkklfysrpkhthttlktsssqspcvmsslaagrradystlsvspkepvvsVDWLhanlrepdlkvldaswympdeqrnpfqeyqvahipgalffdvdgvadrttnlphmlpsEEAFAAAVSALGlenkdglvvydgKGIFSAARVWWMFRVFGHDrvwvldgglprwrasgydvessasGDAILKASAASEAIEKVyqgqvgpttfqtkfqphLIWTLEQVKRNIEEGTYQLVDARSKAR
Flexible Loop (DISEMBL)
masslftrrlvhssfsisykpqVFTSLLNKKLFYSRPKHThttlktsssqspCVMSSLAAGRRADystlsvspkepvVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVkrnieegtyqlvdarskar
Low Complexity Region (SEG)
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPkhthttlktsssqsPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR
Disordered region (IsUnstruct)
******TRRLVHSSFSISYKPQVFTSLLNKKLFYS****************************************PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE******AILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQL********
Disordered Region (DISOPRED)
********RLVHSSFSISYKPQVFTSLLNKKLFYS***************************************EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARS***
Disordered Region (DISEMBL)
********RLVHSSFSISYKPQVFTSLLNKKLFYSRP*******************SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG*********DAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR
Disordered Region (DISPRO)
*ASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM*******************EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDAR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	269	2.2.26 [Sep-21-2011]
O64530	379	Thiosulfate/3-mercaptopyr	yes	no	0.996	0.707	0.697	1e-107
Q24JL3	342	Thiosulfate/3-mercaptopyr	no	no	0.795	0.625	0.746	7e-94
P25325	297	3-mercaptopyruvate sulfur	yes	no	0.643	0.582	0.386	8e-33
P46635	297	Thiosulfate sulfurtransfe	yes	no	0.639	0.579	0.412	3e-32
Q16762	297	Thiosulfate sulfurtransfe	no	no	0.639	0.579	0.412	1e-31
P24329	297	Thiosulfate sulfurtransfe	yes	no	0.639	0.579	0.407	1e-31
P52196	297	Thiosulfate sulfurtransfe	yes	no	0.639	0.579	0.407	2e-31
P00586	297	Thiosulfate sulfurtransfe	no	no	0.639	0.579	0.407	4e-31
P97532	297	3-mercaptopyruvate sulfur	no	no	0.643	0.582	0.381	7e-31
Q99J99	297	3-mercaptopyruvate sulfur	no	no	0.643	0.582	0.366	6e-30

>sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial OS=Arabidopsis thaliana GN=STR1 PE=1 SV=1

 Score =  389 bits (998), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/274 (69%), Positives = 222/274 (81%), Gaps = 6/274 (2%)

Query: 1   MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTH----TTLKTSSSQSPCVMS 56
           MAS+LF+R  + +S  +   P +   + N   F SR  H+     +T   S++ +   M+
Sbjct: 1   MASTLFSRTFLAASHRL-ITPSLPQKIFNPATFLSRSLHSQLGSASTAYKSTTWARRAMA 59

Query: 57  SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAH 116
           S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQVAH
Sbjct: 60  STGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQVAH 119

Query: 117 IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWW 176
           IP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARVWW
Sbjct: 120 IPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARVWW 179

Query: 177 MFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTTF 235
           MFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P TF
Sbjct: 180 MFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPITF 239

Query: 236 QTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           QTKFQPHL+WTL+QVK N+E+ TYQ +DARSKAR
Sbjct: 240 QTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKAR 273

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 2

>sp|Q24JL3|STR2_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 2 OS=Arabidopsis thaliana GN=STR2 PE=1 SV=1

 Score =  343 bits (880), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 162/217 (74%), Positives = 188/217 (86%), Gaps = 3/217 (1%)

Query: 54  VMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ 113
           VM+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQ
Sbjct: 24  VMASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQ 81

Query: 114 VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAAR 173
           VAHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAAR
Sbjct: 82  VAHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAAR 141

Query: 174 VWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGP 232
           VWWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P
Sbjct: 142 VWWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISP 201

Query: 233 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
            TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKAR
Sbjct: 202 ITFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKAR 238

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P25325|THTM_HUMAN 3-mercaptopyruvate sulfurtransferase OS=Homo sapiens GN=MPST PE=1 SV=3

 Score =  140 bits (354), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 105/199 (52%), Gaps = 26/199 (13%)

Query: 77  VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct: 10  LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GGL  W      + S  S                    Q  P  F+ +  P  I T E +
Sbjct: 130 GGLRHWLRQNLPLSSGKS--------------------QPAPAEFRAQLDPAFIKTYEDI 169

Query: 251 KRNIEEGTYQLVDARSKAR 269
           K N+E   +Q+VD+R+  R
Sbjct: 170 KENLESRRFQVVDSRATGR 188

Transfer of a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P46635|THTR_CRIGR Thiosulfate sulfurtransferase OS=Cricetulus griseus GN=TST PE=2 SV=2

 Score =  138 bits (348), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 105/199 (52%), Gaps = 27/199 (13%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGSLGPGLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFADYVGSLGISNDTHVVVYDGDNLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 129 GGFRNWLKEGHPVTSEPS--------------------RPEPAVFKATLDRSLLKTYEQV 168

Query: 251 KRNIEEGTYQLVDARSKAR 269
             N++   +QLVD+R++ R
Sbjct: 169 LENLQSKRFQLVDSRAQGR 187

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification. Binds molecular oxygen and sulfur.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|Q16762|THTR_HUMAN Thiosulfate sulfurtransferase OS=Homo sapiens GN=TST PE=1 SV=4

 Score =  137 bits (344), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 103/199 (51%), Gaps = 27/199 (13%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D  
Sbjct: 10  LVSTKWLAESIRTGKLGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDTA 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V  LG+ N   +VVYDG+  G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAGFAEYVGRLGISNHTHVVVYDGEHLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 129 GGFRNWLKEGHPVTSEPS--------------------RPEPAVFKATLDRSLLKTYEQV 168

Query: 251 KRNIEEGTYQLVDARSKAR 269
             N+E   +QLVD+RS+ R
Sbjct: 169 LENLESKRFQLVDSRSQGR 187

Formation of iron-sulfur complexes, cyanide detoxification or modification of sulfur-containing enzymes. Other thiol compounds, besides cyanide, can act as sulfur ion acceptors. Also has weak mercaptopyruvate sulfurtransferase (MST) activity (By similarity). Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P24329|THTR_RAT Thiosulfate sulfurtransferase OS=Rattus norvegicus GN=Tst PE=1 SV=3

 Score =  136 bits (343), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 103/199 (51%), Gaps = 27/199 (13%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGKVGPSLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  F   V  LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 129 GGFRNWLKEGHPVTSEPS--------------------RPEPAVFKATLNRSLLKTYEQV 168

Query: 251 KRNIEEGTYQLVDARSKAR 269
             N++   +QLVD+R++ R
Sbjct: 169 LENLQSKRFQLVDSRAQGR 187

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Involved in the formation of iron-sulfur complexes, cyanide detoxification or modification of sulfur-containing enzymes. Other thiol compounds, besides cyanide, can act as sulfur ion acceptors. Also has weak mercaptopyruvate sulfurtransferase (MST) activity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P52196|THTR_MOUSE Thiosulfate sulfurtransferase OS=Mus musculus GN=Tst PE=1 SV=3

 Score =  136 bits (342), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 103/199 (51%), Gaps = 27/199 (13%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGRLGPSLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  F   V  LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 129 GGFRNWLKEGHPVTSEPS--------------------RPEPAVFKATLNLSLLKTYEQV 168

Query: 251 KRNIEEGTYQLVDARSKAR 269
             N++   +QLVD+R++ R
Sbjct: 169 LENLQSKRFQLVDSRAQGR 187

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P00586|THTR_BOVIN Thiosulfate sulfurtransferase OS=Bos taurus GN=TST PE=1 SV=3

 Score =  135 bits (339), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 10  LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 129 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 168

Query: 251 KRNIEEGTYQLVDARSKAR 269
             N+E   +QLVD+R++ R
Sbjct: 169 LENLESKRFQLVDSRAQGR 187

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification. Binds molecular oxygen and sulfur.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P97532|THTM_RAT 3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus GN=Mpst PE=1 SV=3

 Score =  134 bits (337), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 105/199 (52%), Gaps = 26/199 (13%)

Query: 77  VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKSPRASQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLPS   FA    +LG+     +V+YDG  +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPSATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHSVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W +    + S  S          SE           P  F  +  P  I T E +
Sbjct: 130 GGFRYWLSQNLPISSGKS---------PSE-----------PAEFCAQLDPSFIKTHEDI 169

Query: 251 KRNIEEGTYQLVDARSKAR 269
             N++   +Q+VDAR+  R
Sbjct: 170 LENLDARRFQVVDARAAGR 188

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|Q99J99|THTM_MOUSE 3-mercaptopyruvate sulfurtransferase OS=Mus musculus GN=Mpst PE=1 SV=3

 Score =  131 bits (329), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 101/199 (50%), Gaps = 26/199 (13%)

Query: 77  VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP+   FA    +LG+     +V+YDG  +G +SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPNATHFADYAGSLGVSAATHVVIYDGSDQGPYSAPRVWWMFRAFGHHSVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W      + S  S                       P  F  +  P  I T E +
Sbjct: 130 GGFRHWLNQNLPISSGKS--------------------HSEPAEFSAQLDPSFIKTHEDI 169

Query: 251 KRNIEEGTYQLVDARSKAR 269
             N++   +Q+VDAR+  R
Sbjct: 170 LENLDARRFQVVDARAAGR 188

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
225465012	380	PREDICTED: 3-mercaptopyruvate sulfurtran	0.996	0.705	0.762	1e-119
118484746	372	unknown [Populus trichocarpa]	0.977	0.706	0.782	1e-117
224096608	372	predicted protein [Populus trichocarpa]	0.977	0.706	0.778	1e-116
255544614	376	thiosulfate sulfertansferase, putative [	0.996	0.712	0.763	1e-116
388492146	384	unknown [Lotus japonicus]	1.0	0.700	0.741	1e-116
4406372	375	thiosulfate sulfurtransferase [Datisca g	0.996	0.714	0.749	1e-114
356525750	379	PREDICTED: 3-mercaptopyruvate sulfurtran	0.992	0.704	0.734	1e-113
358347396	381	Mercaptopyruvate sulfurtransferase-like	0.996	0.703	0.735	1e-111
209917052	379	mercaptopyruvate sulfurtransferase 1 [Br	0.977	0.693	0.708	1e-107
356557008	384	PREDICTED: 3-mercaptopyruvate sulfurtran	0.992	0.695	0.727	1e-107

>gi|225465012|ref|XP_002264748.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase [Vitis vinifera] gi|147820684|emb|CAN69823.1| hypothetical protein VITISV_030676 [Vitis vinifera] gi|297736153|emb|CBI24191.3| unnamed protein product [Vitis vinifera]

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/270 (76%), Positives = 233/270 (86%), Gaps = 2/270 (0%)

Query: 1   MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAA 60
            A +LF  RL+ SS ++  KPQ+FTS  NK+ FYSRP   +   + SS  S C M+S  +
Sbjct: 6   FARTLFGNRLIRSSLALYQKPQIFTSFFNKRPFYSRPNAVYLVYR-SSGFSTCAMASSTS 64

Query: 61  GRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA 120
           G R+ +ST SVSP EPVVSVDWLHAN+REPDLKVLDASWYMPDEQRNP QEYQVAHIPGA
Sbjct: 65  GTRSSFSTQSVSPNEPVVSVDWLHANIREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGA 124

Query: 121 LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV 180
           LFFDVDG++D+TTNLPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARVWWMFRV
Sbjct: 125 LFFDVDGISDQTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRV 184

Query: 181 FGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTTFQTKF 239
           FGH+R+WVLDGGLP WRASG+DVESSASGDAILKASAASEAIEKVY+ Q VGP TFQT+F
Sbjct: 185 FGHERIWVLDGGLPTWRASGFDVESSASGDAILKASAASEAIEKVYRRQAVGPITFQTRF 244

Query: 240 QPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           QPHL+WTLEQV +NIE  T+Q +DARSKAR
Sbjct: 245 QPHLVWTLEQVNQNIENKTHQHIDARSKAR 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484746|gb|ABK94242.1| unknown [Populus trichocarpa]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/271 (78%), Positives = 233/271 (85%), Gaps = 8/271 (2%)

Query: 1   MASSLFTRRLVHSSFSISYK-PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLA 59
           +  SL   RL+HSSFS+S+K PQ+FTSL   + F  R    HT+ K S     CV+    
Sbjct: 6   LTKSLLGHRLIHSSFSLSHKTPQIFTSLFPGRTFQKRADPIHTSYKPSQWVR-CVV---- 60

Query: 60  AGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
            G RA++ST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPG
Sbjct: 61  -GTRANFSTQSLSLNEPVVSVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPG 119

Query: 120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR 179
           ALFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFR
Sbjct: 120 ALFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFR 179

Query: 180 VFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTTFQTK 238
           VFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTK
Sbjct: 180 VFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTK 239

Query: 239 FQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           FQPHL+WTLEQVK NIE+ T+Q VDARSKAR
Sbjct: 240 FQPHLVWTLEQVKSNIEDRTHQHVDARSKAR 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096608|ref|XP_002310670.1| predicted protein [Populus trichocarpa] gi|222853573|gb|EEE91120.1| predicted protein [Populus trichocarpa]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/271 (77%), Positives = 232/271 (85%), Gaps = 8/271 (2%)

Query: 1   MASSLFTRRLVHSSFSISYK-PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLA 59
           +  SL   RL+HSSFS+S+K PQ+FTSL   + F  R    HT+ K S     CV+    
Sbjct: 6   LTKSLLGHRLIHSSFSLSHKTPQIFTSLFPGRTFQKRADPIHTSYKPSQWVR-CVV---- 60

Query: 60  AGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
            G RA++ST S+S  EPVV VDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPG
Sbjct: 61  -GTRANFSTQSLSLNEPVVFVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPG 119

Query: 120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR 179
           ALFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFR
Sbjct: 120 ALFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFR 179

Query: 180 VFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTTFQTK 238
           VFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTK
Sbjct: 180 VFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTK 239

Query: 239 FQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           FQPHL+WTLEQVK NIE+ T+Q VDARSKAR
Sbjct: 240 FQPHLVWTLEQVKSNIEDRTHQHVDARSKAR 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544614|ref|XP_002513368.1| thiosulfate sulfertansferase, putative [Ricinus communis] gi|223547276|gb|EEF48771.1| thiosulfate sulfertansferase, putative [Ricinus communis]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/275 (76%), Positives = 233/275 (84%), Gaps = 7/275 (2%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MA++ FTR     R +H S S+S K Q F SL NK+ FY R    HT+ +TS    P V+
Sbjct: 1   MAAAAFTRTLLGHRFIHCSQSLSLKIQTFPSLFNKRPFYIRADPVHTSHRTSG-WVPRVI 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S   G +A YST S+   EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASTMVGTKASYSTQSLPANEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPIQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG++DR+TNLPHMLPSEEAF+AAVSALG+ENKDGLVVYDGKGIFSAARVW
Sbjct: 120 HIPGALFFDVDGISDRSTNLPHMLPSEEAFSAAVSALGIENKDGLVVYDGKGIFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTT 234
           WMFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY GQ VGP T
Sbjct: 180 WMFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYHGQAVGPIT 239

Query: 235 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           FQTKFQ HL+WTLEQVK+NIE+ T+Q +DARSKAR
Sbjct: 240 FQTKFQLHLVWTLEQVKKNIEDRTHQHIDARSKAR 274

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492146|gb|AFK34139.1| unknown [Lotus japonicus]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/275 (74%), Positives = 235/275 (85%), Gaps = 6/275 (2%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+L ++     RLVHSS  ++++P+V +SL  K+++  R    +TT  + +++    M
Sbjct: 3   MASTLLSKMLLGPRLVHSSSFLTHQPRVLSSLFTKRVYCVRAVPAYTTQNSKTTRWASCM 62

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S   GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QEYQVA
Sbjct: 63  ASSIVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDMKVLDASWYMPDEQRNPIQEYQVA 122

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG+ADRTTNLPHMLPSEEAFAAAVSALG++NKD +VVYDGKG+FSAARVW
Sbjct: 123 HIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDVVVYDGKGLFSAARVW 182

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTT 234
           WMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVYQGQ VGP T
Sbjct: 183 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPIT 242

Query: 235 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           FQTKFQPHL+WTL+QVK+NIEE T+Q +DARSK R
Sbjct: 243 FQTKFQPHLVWTLDQVKKNIEEKTHQQLDARSKPR 277

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4406372|gb|AAD19957.1| thiosulfate sulfurtransferase [Datisca glomerata]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/275 (74%), Positives = 230/275 (83%), Gaps = 7/275 (2%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+LF++     RL+  SF ++  PQ FTSL NK+ F+ R    +T  KTS   S  VM
Sbjct: 1   MASTLFSKALSGSRLIRPSFYLTNYPQSFTSLFNKRQFHLRSNPAYTAYKTSDRIS-SVM 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S  AG R ++ST S+   EPVVS DWLH+NL+EPDL+VLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASSVAGTRLEFSTQSLPTNEPVVSADWLHSNLKEPDLRVLDASWYMPDEQRNPLQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG++DRTT LPHMLPSEEAFAAAVSALG++NKDGLVVYDGKGIFSAARVW
Sbjct: 120 HIPGALFFDVDGISDRTTKLPHMLPSEEAFAAAVSALGIQNKDGLVVYDGKGIFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTT 234
           WMFRVFGHDRVWVLDGGLPRWRA+GYDVESSAS DAILKASAASE IEK+YQGQ  GP T
Sbjct: 180 WMFRVFGHDRVWVLDGGLPRWRAAGYDVESSASSDAILKASAASEVIEKIYQGQAAGPIT 239

Query: 235 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           FQTKFQP+LIW LEQVK+NIEE TYQ VDARSK R
Sbjct: 240 FQTKFQPNLIWGLEQVKKNIEEKTYQHVDARSKPR 274

Source: Datisca glomerata

Species: Datisca glomerata

Genus: Datisca

Family: Datiscaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525750|ref|XP_003531486.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase-like [Glycine max]

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/279 (73%), Positives = 236/279 (84%), Gaps = 12/279 (4%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRP----KHTHTTLKTSSSQS 51
           MAS+LFT+     RL+H    ++++PQ+ +SL +K+LF  R      +T   +KT+   +
Sbjct: 1   MASTLFTKMLLGQRLIHPYSFLTHQPQILSSLFSKRLFCIRAVPVSAYTSQNIKTTG-WA 59

Query: 52  PCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQE 111
           PC M+S + GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QE
Sbjct: 60  PC-MASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQE 118

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
           YQVAHIPGALFFDVDG+ADRTT LPHMLPSEEAFAAAVSALG+ENKD LVVYDGKG+FSA
Sbjct: 119 YQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSA 178

Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-V 230
           ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVY+GQ V
Sbjct: 179 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTV 238

Query: 231 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           GP TFQTKFQPHL+W ++QVK+NIE+ T+Q +DARSK R
Sbjct: 239 GPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPR 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347396|ref|XP_003637743.1| Mercaptopyruvate sulfurtransferase-like protein [Medicago truncatula] gi|355503678|gb|AES84881.1| Mercaptopyruvate sulfurtransferase-like protein [Medicago truncatula]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/276 (73%), Positives = 227/276 (82%), Gaps = 8/276 (2%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQ-SPCV 54
           MASSLFT+     R +H+S   S+ P + +S  NK+LF  R   T T + T S+  SPC+
Sbjct: 1   MASSLFTKILLRPRSIHTSSFFSHNPPILSSFFNKRLFSIRAVPTSTAVNTKSTGWSPCM 60

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
            SS+ + R A YST S    EPVVSVDWL+ NL+EP +KV+DASWYMPDEQRNP QEYQV
Sbjct: 61  ASSIVS-RTATYSTRSAPSNEPVVSVDWLYDNLKEPAIKVVDASWYMPDEQRNPIQEYQV 119

Query: 115 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 174
           AHIPGALFFDVDG+ADRTTNLPHMLPSEEAFAAAVSALG++NKD LVVYDGKGIFSAARV
Sbjct: 120 AHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGIFSAARV 179

Query: 175 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPT 233
           WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVYQGQ VGP 
Sbjct: 180 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPI 239

Query: 234 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           TF+TKFQP L+W LEQV +NIEE ++Q VDAR K R
Sbjct: 240 TFETKFQPQLVWNLEQVTKNIEEKSHQHVDARGKPR 275

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|209917052|gb|ACI96074.1| mercaptopyruvate sulfurtransferase 1 [Brassica rapa subsp. pekinensis]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/278 (70%), Positives = 226/278 (81%), Gaps = 15/278 (5%)

Query: 1   MASSLFTR-------RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPC 53
           MAS+LF+R       RL+  S  +  KP    S L +++F+S+     T  +++ +    
Sbjct: 1   MASTLFSRTFLAATHRLITPSL-LPQKPLHLASFLTRRVFFSQLGSYSTAYRSARA---- 55

Query: 54  VMSSLAAGRRADYSTLS-VSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY 112
            M+S   G RA YST S V+  EPVVSVDWLH+NLREPDLKVLDASWYMPDEQRNP QEY
Sbjct: 56  -MASAGTGARAGYSTSSSVATNEPVVSVDWLHSNLREPDLKVLDASWYMPDEQRNPIQEY 114

Query: 113 QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAA 172
           QVAHIPGALFFD+DG++DR+T+LPHMLPSEEAFAA  SALG+ENKDG+VVYD KGIFSAA
Sbjct: 115 QVAHIPGALFFDLDGISDRSTSLPHMLPSEEAFAAGCSALGIENKDGVVVYDAKGIFSAA 174

Query: 173 RVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VG 231
           RVWWMFRVFGHD+VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQG  V 
Sbjct: 175 RVWWMFRVFGHDKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGHSVS 234

Query: 232 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           P TFQTKFQPHL+WTL+QVK N+E+ TYQ VDARSKAR
Sbjct: 235 PITFQTKFQPHLVWTLDQVKNNMEDQTYQHVDARSKAR 272

Source: Brassica rapa subsp. pekinensis

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557008|ref|XP_003546810.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase-like [Glycine max]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/279 (72%), Positives = 234/279 (83%), Gaps = 12/279 (4%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRP----KHTHTTLKTSSSQS 51
           MAS+L T+     RL+H S  ++++PQ+ +SL +K+LF  R       T   +KT+   +
Sbjct: 6   MASTLLTKMLLGHRLIHPSSFLTHQPQILSSLFSKRLFCIRAVPVSASTSQNIKTTG-WA 64

Query: 52  PCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQE 111
           PC M+S + GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QE
Sbjct: 65  PC-MASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQE 123

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
           YQVAHIPGALFFDVDG+ADRTT LPHMLPS EAFAAAVSALG+ENKD LVVYDGKG+FSA
Sbjct: 124 YQVAHIPGALFFDVDGIADRTTKLPHMLPSAEAFAAAVSALGIENKDDLVVYDGKGLFSA 183

Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-V 230
           ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAA+EAIEKVY+GQ V
Sbjct: 184 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIEKVYKGQTV 243

Query: 231 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           GP TFQTKFQPHL+W ++QVK+NIE+ T+Q +DARSK R
Sbjct: 244 GPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPR 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
TAIR|locus:2207345	379	MST1 "mercaptopyruvate sulfurt	0.996	0.707	0.686	3.2e-97
TAIR|locus:2032800	342	RDH2 "rhodanese homologue 2" [	0.795	0.625	0.746	1.6e-86
UNIPROTKB|Q5LM45	284	SPO3719 "Sulfurtransferase" [R	0.486	0.461	0.507	1.2e-39
TIGR_CMR|SPO_3719	284	SPO_3719 "thiosulfate sulfurtr	0.486	0.461	0.507	1.2e-39
UNIPROTKB|Q608D7	316	sseA "Sulfurtransferase" [Meth	0.483	0.411	0.515	1.5e-39
UNIPROTKB|E1C8D8	293	MPST "Sulfurtransferase" [Gall	0.479	0.440	0.496	2.4e-37
ZFIN|ZDB-GENE-030131-9020	302	zgc:162544 "zgc:162544" [Danio	0.609	0.543	0.421	1e-36
UNIPROTKB|H9L016	267	H9L016 "Sulfurtransferase" [Ga	0.416	0.419	0.535	7.2e-36
UNIPROTKB|E2RJF7	298	MPST "Sulfurtransferase" [Cani	0.561	0.506	0.433	1.1e-33
UNIPROTKB|Q3MHG3	297	MPST "Sulfurtransferase" [Bos	0.490	0.444	0.449	4.9e-33

TAIR|locus:2207345 MST1 "mercaptopyruvate sulfurtransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
 Identities = 188/274 (68%), Positives = 214/274 (78%)

Query:     1 MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPXXXXXXXXXXXXXXPC----VMS 56
             MAS+LF+R  + +S  +   P +   + N   F SR                      M+
Sbjct:     1 MASTLFSRTFLAASHRL-ITPSLPQKIFNPATFLSRSLHSQLGSASTAYKSTTWARRAMA 59

Query:    57 SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAH 116
             S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQVAH
Sbjct:    60 STGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQVAH 119

Query:   117 IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWW 176
             IP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARVWW
Sbjct:   120 IPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARVWW 179

Query:   177 MFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPTTF 235
             MFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P TF
Sbjct:   180 MFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPITF 239

Query:   236 QTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
             QTKFQPHL+WTL+QVK N+E+ TYQ +DARSKAR
Sbjct:   240 QTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKAR 273

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0007568 "aging" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0016783 "sulfurtransferase activity" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2032800 RDH2 "rhodanese homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
 Identities = 162/217 (74%), Positives = 188/217 (86%)

Query:    54 VMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ 113
             VM+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQ
Sbjct:    24 VMASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQ 81

Query:   114 VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAAR 173
             VAHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAAR
Sbjct:    82 VAHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAAR 141

Query:   174 VWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGP 232
             VWWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P
Sbjct:   142 VWWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISP 201

Query:   233 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
              TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKAR
Sbjct:   202 ITFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKAR 238

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

UNIPROTKB|Q5LM45 SPO3719 "Sulfurtransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 392 (143.0 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
 Identities = 67/132 (50%), Positives = 98/132 (74%)

Query:    73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             PK  +VS DWL A+L++PDL++LD SW++P   R+P  EY+ AHIPGA FFD+D ++D  
Sbjct:     5 PKT-LVSTDWLAAHLKDPDLRILDGSWHLPHLGRDPKAEYEAAHIPGARFFDIDDISDHR 63

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
             ++LPHM+P  E F + + A+G+ +   +VVYD  G+ SAARVWW+F++ G D + VLDGG
Sbjct:    64 SDLPHMVPPVEKFMSRLRAMGVGDGHQVVVYDSLGLQSAARVWWLFKLMGQDNIAVLDGG 123

Query:   193 LPRWRASGYDVE 204
             LP+W+A G+ +E
Sbjct:   124 LPKWQAEGHPIE 135

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=ISS

GO:0006790 "sulfur compound metabolic process" evidence=ISS

TIGR_CMR|SPO_3719 SPO_3719 "thiosulfate sulfurtransferase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 392 (143.0 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
 Identities = 67/132 (50%), Positives = 98/132 (74%)

Query:    73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             PK  +VS DWL A+L++PDL++LD SW++P   R+P  EY+ AHIPGA FFD+D ++D  
Sbjct:     5 PKT-LVSTDWLAAHLKDPDLRILDGSWHLPHLGRDPKAEYEAAHIPGARFFDIDDISDHR 63

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
             ++LPHM+P  E F + + A+G+ +   +VVYD  G+ SAARVWW+F++ G D + VLDGG
Sbjct:    64 SDLPHMVPPVEKFMSRLRAMGVGDGHQVVVYDSLGLQSAARVWWLFKLMGQDNIAVLDGG 123

Query:   193 LPRWRASGYDVE 204
             LP+W+A G+ +E
Sbjct:   124 LPKWQAEGHPIE 135

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=ISS

GO:0006790 "sulfur compound metabolic process" evidence=ISS

UNIPROTKB|Q608D7 sseA "Sulfurtransferase" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 363 (132.8 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
 Identities = 67/130 (51%), Positives = 87/130 (66%)

Query:    76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             P+V V WL  +L +P + V+DAS++MP ++R+   E+  AHIPGA FFD+D +AD T  L
Sbjct:    40 PLVDVRWLAGHLHDPQVVVVDASFFMPAQRRDAKTEFGAAHIPGARFFDIDAIADTTCPL 99

Query:   136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
             PHMLP+   FA  V  LG+ N   ++ YDG    ++ARVWW FRVFGHDRV VLDGGL  
Sbjct:   100 PHMLPAPAFFAEQVGRLGIGNDTHVIAYDGNDFMASARVWWTFRVFGHDRVSVLDGGLRC 159

Query:   196 WRASGYDVES 205
             WR  G  + S
Sbjct:   160 WRDQGLPLSS 169

GO:0006790 "sulfur compound metabolic process" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=ISS

UNIPROTKB|E1C8D8 MPST "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 351 (128.6 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 67/135 (49%), Positives = 89/135 (65%)

Query:    77 VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  WL   ++       LKV+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT
Sbjct:    10 LVSAKWLSEAIKSKQTGQALKVVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HM+P    FA  V  LG+ N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LD
Sbjct:    70 SPYDHMMPKANEFAEYVGKLGVGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLD 129

Query:   191 GGLPRWRASGYDVES 205
             GGL  W   G+ + S
Sbjct:   130 GGLKNWLREGFPLSS 144

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-9020 zgc:162544 "zgc:162544" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
 Identities = 72/171 (42%), Positives = 100/171 (58%)

Query:    64 ADYSTLSVSPKEPVVSVDWL----HANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
             A + ++  +    +V+  WL     +N   P+L++LDASWY+P  +RNP  E++  HIPG
Sbjct:     1 AYWMSVMAAQTRALVAARWLADAVKSNRVGPNLRILDASWYLPKMKRNPRAEFEQTHIPG 60

Query:   120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWM 177
             A FFD+D   D+++   HMLP++  FA  V  LG+ N   +VVYD    G FSA RVWWM
Sbjct:    61 ASFFDIDECCDKSSEFDHMLPTKGEFADYVGNLGIGNNTHVVVYDASDFGSFSAPRVWWM 120

Query:   178 FRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA-SEAIEKVYQ 227
             FRVFGH  V VLDGG   W   G+ V    S  A +  +A+  E+  K Y+
Sbjct:   121 FRVFGHSSVSVLDGGFKNWLKEGHPVSQQYSKPAPVDFNASFKESWVKTYE 171

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|H9L016 H9L016 "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
 Identities = 61/114 (53%), Positives = 81/114 (71%)

Query:    94 VLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 153
             V+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT+   HM+P  + FA  V  LG
Sbjct:     1 VVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRTSPYDHMMPKADEFAEYVGKLG 60

Query:   154 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 205
             + N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LDGGL  W   G+ + S
Sbjct:    61 VGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLDGGLKNWLREGFPLSS 114

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

UNIPROTKB|E2RJF7 MPST "Sulfurtransferase" [Canis lupus familiaris (taxid:9615)]

 Score = 313 (115.2 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 69/159 (43%), Positives = 91/159 (57%)

Query:    77 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct:    10 LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HMLPS E FA     LG+     +VVYD   +G+++A RVWWMFR FGH  V +LD
Sbjct:    70 SPYDHMLPSAEHFAEYAGRLGVGAATHVVVYDASDQGLYAAPRVWWMFRAFGHRTVSLLD 129

Query:   191 GGLPRWRASGYDVESSASGDAILK--ASAASEAIEKVYQ 227
             GGL  W   G  + S  S  A      +A   A  K Y+
Sbjct:   130 GGLRHWLRLGLPLSSGKSRPAPAADFRAALDPAFVKTYE 168

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

UNIPROTKB|Q3MHG3 MPST "Sulfurtransferase" [Bos taurus (taxid:9913)]

 Score = 301 (111.0 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
 Identities = 62/138 (44%), Positives = 83/138 (60%)

Query:    77 VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  W+   LR P     L++LDASWY+    R+  +E++  HIPGA FFD+D  +DRT
Sbjct:    10 LVSAQWVAEALRAPQAGQPLRLLDASWYLAKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HMLPS   F+     LG+     +VVYD   +G+++A RVWWMFRVFGH  V +LD
Sbjct:    70 SPYDHMLPSAAHFSEYAGRLGVGAATHVVVYDASDQGLYAAPRVWWMFRVFGHRTVSLLD 129

Query:   191 GGLPRWRASGYDVESSAS 208
             GGL  W   G  + S  S
Sbjct:   130 GGLRNWLRQGLPLSSGKS 147

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O64530	STR1_ARATH	2, ., 8, ., 1, ., 2	0.6970	0.9962	0.7071	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	269
PLN02723	320	PLN02723, PLN02723, 3-mercaptopyruvate sulfurtrans	1e-153
COG2897	285	COG2897, SseA, Rhodanese-related sulfurtransferase	4e-61
cd01448	122	cd01448, TST_Repeat_1, Thiosulfate sulfurtransfera	1e-55
PRK11493	281	PRK11493, sseA, 3-mercaptopyruvate sulfurtransfera	7e-46
cd01445	138	cd01445, TST_Repeats, Thiosulfate sulfurtransferas	2e-22
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	5e-19
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	1e-18
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	5e-07
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	5e-07
PRK09629	610	PRK09629, PRK09629, bifunctional thiosulfate sulfu	6e-06
COG2897	285	COG2897, SseA, Rhodanese-related sulfurtransferase	0.002
cd01444	96	cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and	0.003

>gnl|CDD|178324 PLN02723, PLN02723, 3-mercaptopyruvate sulfurtransferase

 Score =  429 bits (1105), Expect = e-153
 Identities = 184/216 (85%), Positives = 203/216 (93%), Gaps = 1/216 (0%)

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
           M+S  +  +A+YST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQV
Sbjct: 1   MASSGSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQV 60

Query: 115 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 174
           AHIPGALFFD+DG++DRTT+LPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARV
Sbjct: 61  AHIPGALFFDLDGISDRTTDLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARV 120

Query: 175 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VGPT 233
           WWMFRVFGH++VWVLDGGLP+WRASGYDVESSASGDAILKASAASEAIEKVYQGQ V P 
Sbjct: 121 WWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVSPI 180

Query: 234 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           TFQTKFQPHL+WTLEQVK+NIE+ TYQ +DARSKAR
Sbjct: 181 TFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKAR 216

Length = 320

>gnl|CDD|225450 COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score =  194 bits (495), Expect = 4e-61
 Identities = 75/197 (38%), Positives = 99/197 (50%), Gaps = 22/197 (11%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             E +VS DWL  NL +P + ++DA   +PD      +EY   HIPGA+FFD +      
Sbjct: 8   SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDDA--EEYLEGHIPGAVFFDWEADLSDP 65

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
             LPHMLPS E FA  +  LG+ N D +VVYD  G F AAR WW+ R  GH+ V +LDGG
Sbjct: 66  VPLPHMLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGG 125

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKR 252
           LP W+A+G  +E+                       +  PTTF  K+    +     V  
Sbjct: 126 LPAWKAAGLPLET--------------------EPPEPPPTTFSAKYNVKAVVDATLVAD 165

Query: 253 NIEEGTYQLVDARSKAR 269
            +E     L+DARS  R
Sbjct: 166 ALEVPAVLLIDARSPER 182

Length = 285

>gnl|CDD|238725 cd01448, TST_Repeat_1, Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

 Score =  174 bits (444), Expect = 1e-55
 Identities = 66/124 (53%), Positives = 84/124 (67%), Gaps = 2/124 (1%)

Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DWL  +L +PD+++LDA WY+PD  R+  +EY   HIPGA+FFD+D   D  +  P
Sbjct: 1   LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGP 58

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLPS E FA  + +LG+ N D +VVYD  G F AAR WW  R FGH+ V VLDGGL  W
Sbjct: 59  HMLPSPEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAW 118

Query: 197 RASG 200
           +A G
Sbjct: 119 KAEG 122

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction. Length = 122

>gnl|CDD|236917 PRK11493, sseA, 3-mercaptopyruvate sulfurtransferase; Provisional

 Score =  154 bits (392), Expect = 7e-46
 Identities = 71/193 (36%), Positives = 99/193 (51%), Gaps = 21/193 (10%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V+ DWL  ++ +P+++++DA    P  E R+   EY+  HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLP 66

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HM+P  E FA A+  LG+     LVVYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMMPRPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGW 126

Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEE 256
           +     +E    G   L                     F   F P  +  L  V     E
Sbjct: 127 QRDDLLLE---EGAVELP-----------------EGEFNAAFNPEAVVRLTDVLLASHE 166

Query: 257 GTYQLVDARSKAR 269
            T Q+VDAR  AR
Sbjct: 167 KTAQIVDARPAAR 179

Length = 281

>gnl|CDD|238722 cd01445, TST_Repeats, Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

 Score = 89.5 bits (221), Expect = 2e-22
 Identities = 45/136 (33%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 78  VSVDWLHANLRE----PDLKVLDASWYMPD--EQRNPFQEYQVA---------HIPGALF 122
            S + L  NL         ++LDA    P   E R  + E Q           HIPGA F
Sbjct: 1   KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASF 60

Query: 123 FDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRV 180
           FD +   D       M PSE  FAA   A G++    L+  DG   G F+A  +    R+
Sbjct: 61  FDFEECLDEAGFEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARL 120

Query: 181 FGHDRVWVLDGGLPRW 196
            GH  V +LDGG   W
Sbjct: 121 CGHPDVAILDGGFFEW 136

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. Length = 138

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 79.4 bits (196), Expect = 5e-19
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 15/114 (13%)

Query: 89  EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA 148
           +  + +LD         R+P +EY+  HIPGA+   +  + DR   L  +      F   
Sbjct: 2   DEKVVLLDV--------RSP-EEYEGGHIPGAVNIPLSELLDRRGELDIL-----EFEEL 47

Query: 149 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 202
           +  LGL+    +VVY   G  SA +  W+ R  G   V++LDGG   W A+G  
Sbjct: 48  LKRLGLDKDKPVVVYCRSGNRSA-KAAWLLRELGFKNVYLLDGGYKEWSAAGPP 100

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 78.7 bits (194), Expect = 1e-18
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 27/126 (21%)

Query: 79  SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHM 138
           + + L A L   D+ ++D             +EY   HIPGA+            N+P  
Sbjct: 1   TAEELKALLEADDVVLIDVR---------SPEEYAKGHIPGAV------------NIPLS 39

Query: 139 LPSEEAFAAAVSALG--LENKDGLVVYDGKGIFS----AARVWWMFRVFGHDRVWVLDGG 192
           LPS +   + +  LG  L+    +VVY   G  S    A  +  + +  G+  V+VLDGG
Sbjct: 40  LPSLDKLESELEELGKKLDKDKTIVVYCASGNRSGQAAALLLALILKALGYKNVYVLDGG 99

Query: 193 LPRWRA 198
              W+A
Sbjct: 100 FEAWKA 105

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 29/128 (22%)

Query: 78  VSVDWLHANLREPDLKVLDA-SWYMPDE---QRNPFQEYQVA-HIPGALFFDVDGVADRT 132
           V+ + + ANL   D++++DA S   P+    +    +    + HIPGA+           
Sbjct: 1   VTAEEVLANLDSGDVQLVDARS---PERFRGEVPEPRPGLRSGHIPGAV----------- 46

Query: 133 TNLPH--------MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHD 184
            N+P            S E   A  +ALG+     ++VY G G+ +A  +     + G+ 
Sbjct: 47  -NIPWTSLLDEDGTFKSPEELRALFAALGITPDKPVIVYCGSGV-TACVLLLALELLGYK 104

Query: 185 RVWVLDGG 192
            V + DG 
Sbjct: 105 NVRLYDGS 112

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 46.1 bits (110), Expect = 5e-07
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 29/117 (24%)

Query: 82  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 141
            L   L + D  +LD         R P  EY   HIPGA+   +  + +R          
Sbjct: 1   ELKELLDDEDAVLLDV--------REPE-EYAAGHIPGAINIPLSELEER---------- 41

Query: 142 EEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 197
                   +AL   +KD  +VVY   G   +AR   + R  G   V+ L+GG+  W+
Sbjct: 42  --------AALLELDKDKPIVVYCRSGN-RSARAAKLLRKAGGTNVYNLEGGMLAWK 89

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|104071 PRK09629, PRK09629, bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

 Score = 46.6 bits (110), Expect = 6e-06
 Identities = 39/125 (31%), Positives = 48/125 (38%), Gaps = 6/125 (4%)

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGL-VVYDGKGIFS 170
           Y+  HI GA F D           P +LP           LG  N D + VVYD +G   
Sbjct: 36  YEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG-HNPDAVYVVYDDEGGGW 94

Query: 171 AARVWWMFRVFGHDRVWVLDGGLPRWRASGY----DVESSASGDAILKASAASEAIEKVY 226
           A R  W+  V GH     LDGG+  W A       DV   A G   L       A  +  
Sbjct: 95  AGRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVPPVAGGPVTLTLHDEPTATREYL 154

Query: 227 QGQVG 231
           Q ++G
Sbjct: 155 QSRLG 159

Length = 610

>gnl|CDD|225450 COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ----------VAHIPGAL- 121
             + VV    +   L  P + ++DA        R+P + ++            HIPGA+ 
Sbjct: 153 NVKAVVDATLVADALEVPAVLLIDA--------RSP-ERFRGKEPEPRDGKAGHIPGAIN 203

Query: 122 FFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF 181
               D V D       +  S E  A   +  G++    ++VY G G+  A+  W      
Sbjct: 204 IPWTDLVDDG-----GLFKSPEEIARLYADAGIDPDKEVIVYCGSGV-RASVTWLALAEL 257

Query: 182 GHDRVWVLDGGLPRW 196
           G     + DG    W
Sbjct: 258 GGPNNRLYDGSWSEW 272

Length = 285

>gnl|CDD|238721 cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 20/83 (24%)

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGA+  D D + D           +      V           VVY   G  S+A++ 
Sbjct: 34  HIPGAIHLDEDSLDD--------WLGDLDRDRPV-----------VVYCYHGN-SSAQLA 73

Query: 176 WMFRVFGHDRVWVLDGGLPRWRA 198
              R  G   V  L GG   WR 
Sbjct: 74  QALREAGFTDVRSLAGGFEAWRR 96

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine. Length = 96

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	269
PLN02723	320	3-mercaptopyruvate sulfurtransferase	100.0
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	100.0
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	100.0
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	100.0
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	99.97
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.94
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.92
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.89
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.88
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.88
PLN02723	320	3-mercaptopyruvate sulfurtransferase	99.86
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.86
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.86
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.84
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.84
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.83
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	99.82
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	99.82
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.82
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.82
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.81
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.81
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.81
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.8
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	99.8
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.8
PLN02160	136	thiosulfate sulfurtransferase	99.8
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.79
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.78
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.77
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.77
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.77
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.76
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.76
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.75
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.75
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.74
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.74
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	99.74
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.74
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.73
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	99.73
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.72
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.71
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.68
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.65
PRK01415	247	hypothetical protein; Validated	99.65
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.65
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.63
PRK05320	257	rhodanese superfamily protein; Provisional	99.6
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.6
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.55
PRK07411	390	hypothetical protein; Validated	99.52
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.31
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	99.22
COG1054	308	Predicted sulfurtransferase [General function pred	99.05
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	98.93
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	98.89
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	98.63
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	98.14
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	97.58
KOG1717	343	consensus Dual specificity phosphatase [Defense me	96.5
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	91.01
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	90.63
KOG3636	669	consensus Uncharacterized conserved protein, conta	89.52
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	89.06
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	84.75
KOG1093	725	consensus Predicted protein kinase (contains TBC a	83.73
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	81.96

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=100.00  E-value=2e-39  Score=300.18  Aligned_cols=215  Identities=86%  Similarity=1.368  Sum_probs=186.1

Q ss_pred             eeeccccCCCCCcccCCCCCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccC
Q 024280           54 VMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT  133 (269)
Q Consensus        54 ~~~s~~~~~~~~~~~~~~~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~  133 (269)
                      |.|| .+.+.+.+++.++..+..+|+++||++++++++++|||+|+.++.+.+++..+|..||||||+|+|+..+.+...
T Consensus         1 ~~~~-~~~~~~~~~~~~~~~~~~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi~i~~~~~~~~~~   79 (320)
T PLN02723          1 MASS-GSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDLDGISDRTT   79 (320)
T ss_pred             CCcc-chhhcccCcccccccCCceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHHHhccCCCCeecCHHHhcCCCC
Confidence            3455 788999999999999899999999999998888999999987766544445789999999999999988877666


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHH
Q 024280          134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAIL  213 (269)
Q Consensus       134 ~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~  213 (269)
                      ..++++|+.+.|+++|+++||+++++|||||+.|.++++|+||+|+++||+||++||||+.+|+++|+|+++..+.+.+.
T Consensus        80 ~~~~~lp~~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~~~W~~~G~pv~~~~~~~~~~  159 (320)
T PLN02723         80 DLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAIL  159 (320)
T ss_pred             CcCCCCCCHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCHHHHHHcCCCcccCCCccccc
Confidence            78899999999999999999999999999999888889999999999999999999999999999999999876544444


Q ss_pred             HhhhhHHHHHHhhcCC-CCCcccccccCCccccCHHHHHHHhhCCCcEEEccCCCCC
Q 024280          214 KASAASEAIEKVYQGQ-VGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR  269 (269)
Q Consensus       214 ~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~r  269 (269)
                      ++.+++|.+++.|+++ +.+.+|...++++++++.++|++++++++.+|||+|+++|
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~iiD~R~~~e  216 (320)
T PLN02723        160 KASAASEAIEKVYQGQTVSPITFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKAR  216 (320)
T ss_pred             cccccccccccccccCCCCCCcccccCCccceecHHHHHHhhcCCCeEEEECCCccc
Confidence            4445566666666553 5667888899999999999999999888899999999754

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1e-36  Score=276.10  Aligned_cols=176  Identities=43%  Similarity=0.763  Sum_probs=159.7

Q ss_pred             CCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        72 ~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      .....+|+++||.+++++++++++|+|+..+...  ...+|..+|||||++++++.+.+....+++|+|++++|+++|++
T Consensus         7 ~~~~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~--~~~~Y~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e~fa~~~~~   84 (285)
T COG2897           7 MSSEFLVSPDWLAENLDDPAVVIVDARIILPDPD--DAEEYLEGHIPGAVFFDWEADLSDPVPLPHMLPSPEQFAKLLGE   84 (285)
T ss_pred             cCcceEEcHHHHHhhccccccccCceEEEeCCcc--hHHHHHhccCCCCEecCHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence            3456899999999999988888888887776653  26899999999999999998766666689999999999999999


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCC
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVG  231 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~  231 (269)
                      +||++|++||+|++.+.++|+|+||+|+++||+||++||||+.+|+++|+|+++.++                    +..
T Consensus        85 ~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~~W~~~g~p~~~~~~--------------------~~~  144 (285)
T COG2897          85 LGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLPAWKAAGLPLETEPP--------------------EPP  144 (285)
T ss_pred             cCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHHHHHHcCCCccCCCC--------------------CCC
Confidence            999999999999999999999999999999999999999999999999999999765                    256


Q ss_pred             CcccccccCCccccCHHHHHHHhhCCCcEEEccCCCCC
Q 024280          232 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR  269 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~r  269 (269)
                      +..|..+++...+++.++++..++.+..+|||+|+++|
T Consensus       145 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~liDaR~~~r  182 (285)
T COG2897         145 PTTFSAKYNVKAVVDATLVADALEVPAVLLIDARSPER  182 (285)
T ss_pred             CccccccCCccccCCHHHHHHHhcCCCeEEEecCCHHH
Confidence            78899999999999999999999999999999999875

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=100.00  E-value=2.6e-32  Score=248.23  Aligned_cols=175  Identities=39%  Similarity=0.753  Sum_probs=151.5

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCC-CCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQR-NPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~-~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..+|+++||++++++++++|||+|+....... +...+|..||||||+|+|+..+.....+.++++|+.++|+++++++|
T Consensus         4 ~~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G   83 (281)
T PRK11493          4 TWFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLPHMMPRPETFAVAMRELG   83 (281)
T ss_pred             CcccCHHHHHHhcCCCCeEEEEeeCCCCCccccchHHHHHhCcCCCCEEcCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            36899999999998888999999954333211 12578999999999999998876666667789999999999999999


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCc
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPT  233 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  233 (269)
                      |+++++|||||.++.++++|++|+|+.+||+||++|+||+.+|.++|+|+++..+                    ++.+.
T Consensus        84 i~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~--------------------~~~~~  143 (281)
T PRK11493         84 VNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGWQRDDLLLEEGAV--------------------ELPEG  143 (281)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCCHHHHHHcCCCccCCCC--------------------CCCCC
Confidence            9999999999998777789999999999999999999999999999999998764                    24566


Q ss_pred             ccccccCCccccCHHHHHHHhhCCCcEEEccCCCCC
Q 024280          234 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR  269 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~r  269 (269)
                      +|...++++.++++++++..+++++.+|||+|+++|
T Consensus       144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~llD~R~~~e  179 (281)
T PRK11493        144 EFNAAFNPEAVVRLTDVLLASHEKTAQIVDARPAAR  179 (281)
T ss_pred             cccccCCccceecHHHHHHhhcCCCcEEEeCCCccc
Confidence            788888889999999999888877889999999764

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=4.4e-32  Score=269.43  Aligned_cols=167  Identities=25%  Similarity=0.379  Sum_probs=147.9

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ...+|+++||++++++++++|||+|         ..++|..||||||+|+|++.+.......++++|+.++|++.++++|
T Consensus         7 ~~~lIs~~eL~~~l~~~~vvIIDvR---------~~~eY~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~lG   77 (610)
T PRK09629          7 LSLVIEPNDLLERLDAPELILVDLT---------SSARYEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG   77 (610)
T ss_pred             CCceecHHHHHHHhcCCCEEEEECC---------ChHHHHhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHHcC
Confidence            5579999999999988889999999         5789999999999999987654434456789999999999999999


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCc
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPT  233 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  233 (269)
                      |+++++|||||+.+..+|+|+||+|+++||++|++||||+.+|+.+|+|++++.+.                    +.+.
T Consensus        78 I~~d~~VVvYd~~g~~~A~R~~w~L~~~G~~~V~iLdGG~~aW~~ag~p~~~~~~~--------------------~~~~  137 (610)
T PRK09629         78 HNPDAVYVVYDDEGGGWAGRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVPP--------------------VAGG  137 (610)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHcCCCCEEEcCCCHHHHHHcCCccccCCCC--------------------CCCc
Confidence            99999999999988777999999999999999999999999999999999987541                    3345


Q ss_pred             ccccccCCccccCHHHHHHHhhCCCcEEEccCCCCC
Q 024280          234 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR  269 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~r  269 (269)
                      .|...++++.+++.++|++++++++++|||+|+++|
T Consensus       138 ~~~~~~~~~~~v~~e~v~~~l~~~~~~iIDaR~~~e  173 (610)
T PRK09629        138 PVTLTLHDEPTATREYLQSRLGAADLAIWDARAPTE  173 (610)
T ss_pred             ceeeccCCcccccHHHHHHhhCCCCcEEEECCCccc
Confidence            677777888899999999999888899999999875

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=99.97  E-value=6.2e-31  Score=234.72  Aligned_cols=178  Identities=43%  Similarity=0.773  Sum_probs=161.2

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      .+.+|+++|+.+++.+..++|||+.|+++...++...+|..-|||||++|+++.+.++.++.++|+|..+.|++.++.+|
T Consensus         3 ~~~iv~~~~v~~~~~~~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e~Fa~y~~~lG   82 (286)
T KOG1529|consen    3 VDSIVSVKWVMENLGNHGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAEHFAEYASRLG   82 (286)
T ss_pred             cccccChHHHHHhCcCCCeEEEeeeeecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHHHHHHHHHhcC
Confidence            45789999999999988899999999999877777889999999999999999999999999999999999999999999


Q ss_pred             CCCCCcEEEeCC--CChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCC
Q 024280          154 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVG  231 (269)
Q Consensus       154 I~~d~~VVvY~~--~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~  231 (269)
                      |++++.||||++  .|+.+|+|+||+|+.+||++|.+||||+.+|+++|+|+++..+.              ..    ..
T Consensus        83 i~n~d~vViYd~~~~Gm~~Asrv~W~fr~fGh~~VslL~GG~~~Wk~~g~~~~s~~~~--------------~p----~~  144 (286)
T KOG1529|consen   83 VDNGDHVVIYDRGDGGMFSASRVWWTFRVFGHTKVSLLNGGFRAWKAAGGPVDSSKVE--------------TP----YS  144 (286)
T ss_pred             CCCCCeEEEEcCCCcceeehhhHHHHHHHhCccEEEEecCcHHHHHHcCCcccccccc--------------CC----CC
Confidence            999999999999  89999999999999999999999999999999999999998751              00    13


Q ss_pred             CcccccccCCccccCHHHHHHH-hhCCCcEEEccCCCCC
Q 024280          232 PTTFQTKFQPHLIWTLEQVKRN-IEEGTYQLVDARSKAR  269 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~v~~~-l~~~~~~iiDaRs~~r  269 (269)
                      +..|...++++++++++++..+ .+.+++++||+|+.+|
T Consensus       145 ~~~~~~~~d~~il~~~edi~~n~~~~~~~~~~DaRs~gr  183 (286)
T KOG1529|consen  145 PIVFVASLDNSILATLEDIPFNNLATKNFQYLDARSKGR  183 (286)
T ss_pred             CccchhhcchHHHHHHhhccccccccccceeeecccccc
Confidence            4556678999999999999987 7777899999999875

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.94  E-value=7e-27  Score=191.83  Aligned_cols=119  Identities=37%  Similarity=0.544  Sum_probs=103.5

Q ss_pred             ccHHHHHHhhC----CCCcEEEEeccCCCCCCCCCHhhHhh------------CCCCCCeeccccccccccCCCCCCCCC
Q 024280           78 VSVDWLHANLR----EPDLKVLDASWYMPDEQRNPFQEYQV------------AHIPGALFFDVDGVADRTTNLPHMLPS  141 (269)
Q Consensus        78 Is~~eL~~~l~----~~~~vIIDvR~~~~~~~~~~~~ey~~------------gHIPGAi~ip~~~l~~~~~~~~~~lp~  141 (269)
                      ||++||+++++    +++++|||+|+.+++. ++..++|..            ||||||+|+|+..+.+.+....+++|+
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~-~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~~~~~~~p~   79 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGT-REARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEPS   79 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccC-cchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCCCCCCCCCC
Confidence            68999999997    4679999999765543 233478887            999999999998776666667789999


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEeCCC--ChHHHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          142 EEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       142 ~~~f~~~l~~lGI~~d~~VVvY~~~--g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                      .++|+++++.+||+++++||+||+.  +...|+|+||+|+++||+||++||||+.+|+
T Consensus        80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~~~W~  137 (138)
T cd01445          80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWF  137 (138)
T ss_pred             HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCHHHhh
Confidence            9999999999999999999999975  4557999999999999999999999999996

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.92  E-value=3.1e-24  Score=171.09  Aligned_cols=122  Identities=54%  Similarity=1.039  Sum_probs=102.8

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCC
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~  156 (269)
                      +|++++|.+++.+++.+|||+|....+  ..+..+|..||||||+|+|+..+.....+..+++++.++|++.++.+|+++
T Consensus         1 ~i~~~~l~~~l~~~~~~ivDvR~~~~~--~~~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (122)
T cd01448           1 LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGISN   78 (122)
T ss_pred             CcCHHHHHHHhCCCCeEEEEeecCCCC--CchhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCCC
Confidence            589999999998777899999932111  012278999999999999998765433345678999999999999999999


Q ss_pred             CCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCC
Q 024280          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (269)
Q Consensus       157 d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G  200 (269)
                      +++|||||++|...|++++|+|+.+||+||++|+||+.+|.++|
T Consensus        79 ~~~vv~~c~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  122 (122)
T cd01448          79 DDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAWKAEG  122 (122)
T ss_pred             CCEEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHhCc
Confidence            99999999986456999999999999999999999999999865

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.89  E-value=8.8e-23  Score=161.50  Aligned_cols=107  Identities=27%  Similarity=0.490  Sum_probs=93.4

Q ss_pred             ccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhh-----------CCCCCCeeccccccccccCCCCCCCCCHHHHH
Q 024280           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV-----------AHIPGALFFDVDGVADRTTNLPHMLPSEEAFA  146 (269)
Q Consensus        78 Is~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~-----------gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~  146 (269)
                      |++++|.+++++++++|||+|         +..+|..           ||||||+|+|+..+....    +.++..++|.
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR---------~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~----~~~~~~~~~~   67 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDAR---------SPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDED----GTFKSPEELR   67 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCC---------CHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCC----CCcCCHHHHH
Confidence            578999999876678999999         4566655           999999999998765422    5788899999


Q ss_pred             HHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          147 AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       147 ~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      +.+..+|++++++||+||++|. .|.+++|.|+.+||++|++|+||+.+|.+
T Consensus        68 ~~~~~~~~~~~~~iv~yc~~g~-~s~~~~~~l~~~G~~~v~~l~GG~~~W~~  118 (118)
T cd01449          68 ALFAALGITPDKPVIVYCGSGV-TACVLLLALELLGYKNVRLYDGSWSEWGS  118 (118)
T ss_pred             HHHHHcCCCCCCCEEEECCcHH-HHHHHHHHHHHcCCCCeeeeCChHHHhcC
Confidence            9999999999999999999876 48999999999999999999999999973

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.88  E-value=1.7e-22  Score=156.76  Aligned_cols=104  Identities=21%  Similarity=0.298  Sum_probs=91.7

Q ss_pred             cHHHHHHhhC-CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024280           79 SVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  157 (269)
Q Consensus        79 s~~eL~~~l~-~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d  157 (269)
                      |++++.++++ +++.+|||+|         +..+|..||||||+|+|+..+.+      ...++.++|+++++.++++++
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~------~~~~~~~~~~~~~~~~~~~~~   66 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVR---------EPEELKTGKIPGAINIPLSSLPD------ALALSEEEFEKKYGFPKPSKD   66 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECC---------CHHHHhcCcCCCcEEechHHhhh------hhCCCHHHHHHHhcccCCCCC
Confidence            6789999887 6679999999         67899999999999999887532      234567889999999999999


Q ss_pred             CcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          158 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       158 ~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      ++||+||++|.+ +.+++++|+.+||+||++|+||+.+|.+
T Consensus        67 ~~ivv~c~~g~~-s~~~~~~l~~~G~~~v~~~~Gg~~~W~~  106 (106)
T cd01519          67 KELIFYCKAGVR-SKAAAELARSLGYENVGNYPGSWLDWAA  106 (106)
T ss_pred             CeEEEECCCcHH-HHHHHHHHHHcCCccceecCCcHHHHcC
Confidence            999999999875 7899999999999999999999999963

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.88  E-value=4.5e-22  Score=167.53  Aligned_cols=118  Identities=18%  Similarity=0.233  Sum_probs=91.7

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhh---------CCCCCCeeccccccccccCCCCCCCCCHHHH
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV---------AHIPGALFFDVDGVADRTTNLPHMLPSEEAF  145 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~---------gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f  145 (269)
                      ...|+++|+.+++++++.+|||||.....     ..+|..         +|||||+|+|+..+..    +.  -+..+.|
T Consensus        35 ~~~vs~~el~~~l~~~~~~lIDVR~~~~~-----~~e~~~G~~~~~~~~~HIPGAv~ip~~~~~~----l~--~~~~~~~  103 (162)
T TIGR03865        35 ARVLDTEAAQALLARGPVALIDVYPRPPK-----PKNLLEGTVWRDEPRLNIPGSLWLPNTGYGN----LA--PAWQAYF  103 (162)
T ss_pred             ccccCHHHHHHHHhCCCcEEEECCCCccc-----cccccccceeccccCCCCCCcEEecccCCCC----CC--CchhHHH
Confidence            46899999999998878999999931100     013433         5999999999643211    00  1233457


Q ss_pred             HHHHHHcCC-CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCce
Q 024280          146 AAAVSALGL-ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       146 ~~~l~~lGI-~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      .+.++++++ +++++||+||++|+..+.+++|+|+.+||+||++|+||+.+|+.+|+|+
T Consensus       104 ~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~~V~~l~GG~~aW~~aG~Pv  162 (162)
T TIGR03865       104 RRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYSNVYWYPDGTDGWQAAGLPL  162 (162)
T ss_pred             HHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCcceEEecCCHHHHHHcCCCC
Confidence            888877765 7999999999998866899999999999999999999999999999985

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=99.86  E-value=1.8e-21  Score=180.34  Aligned_cols=129  Identities=20%  Similarity=0.275  Sum_probs=105.0

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCC--CCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQ--RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~--~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      +..+++.+|+.+.+++++.+|||+|.......  ..+...+..||||||+|+|+..+.+.+    +.+++.++|++.+.+
T Consensus       188 ~~~~~~~~~v~~~~~~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgAvnip~~~~~~~~----~~~~~~~el~~~~~~  263 (320)
T PLN02723        188 PHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVPFPQMLDSS----QTLLPAEELKKRFEQ  263 (320)
T ss_pred             ccceecHHHHHHhhcCCCeEEEECCCcccccCCCCCCCCCCcCCcCCCCcccCHHHhcCCC----CCCCCHHHHHHHHHh
Confidence            45678999999999877889999993211110  011234578999999999998765433    468899999999999


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhC-CCceecCC
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVESSA  207 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~-G~pv~~~~  207 (269)
                      +|++++++||+||++|.+ |++++|+|+.+||+||++|||||.+|... ++|++++.
T Consensus       264 ~gi~~~~~iv~yC~sG~~-A~~~~~~L~~~G~~~v~~YdGs~~eW~~~~~~Pv~~~~  319 (320)
T PLN02723        264 EGISLDSPIVASCGTGVT-ACILALGLHRLGKTDVPVYDGSWTEWGALPDTPVATST  319 (320)
T ss_pred             cCCCCCCCEEEECCcHHH-HHHHHHHHHHcCCCCeeEeCCCHHHHhcCCCCCccCCC
Confidence            999999999999999875 89999999999999999999999999985 67887653

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.86  E-value=5.2e-22  Score=160.45  Aligned_cols=109  Identities=23%  Similarity=0.383  Sum_probs=82.4

Q ss_pred             ccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccC-------C-------CCCCCCCHH
Q 024280           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT-------N-------LPHMLPSEE  143 (269)
Q Consensus        78 Is~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~-------~-------~~~~lp~~~  143 (269)
                      ||++||.++++ ++.+|||||         ...+|..||||||+|||+..+.....       .       ++.++++ .
T Consensus         1 ~s~~el~~~l~-~~~~iiDvR---------~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   69 (128)
T cd01520           1 ITAEDLLALRK-ADGPLIDVR---------SPKEFFEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVS-G   69 (128)
T ss_pred             CCHHHHHHHHh-cCCEEEECC---------CHHHhccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHh-h
Confidence            68999999997 578999999         68999999999999999865321100       0       0011221 2


Q ss_pred             HHHHHHH---HcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          144 AFAAAVS---ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       144 ~f~~~l~---~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      .++++++   ..|++++++|||||..++.+|.+++|+|+.+|| +|++|+||+.+|+.
T Consensus        70 ~~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~-~v~~L~GG~~aw~~  126 (128)
T cd01520          70 KLKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESLGI-DVPLLEGGYKAYRK  126 (128)
T ss_pred             hHHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC-ceeEeCCcHHHHHh
Confidence            3444444   358999999999997433348899999999999 59999999999985

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.86  E-value=2.9e-21  Score=151.37  Aligned_cols=98  Identities=27%  Similarity=0.271  Sum_probs=85.3

Q ss_pred             CcccHHHHHHhhCCC-CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           76 PVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~-~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      ..|++++|.+.++++ +.+|||+|         +..+|..||||||+|+|+..                 |...++.++.
T Consensus        10 ~~i~~~~l~~~~~~~~~~~liDvR---------~~~e~~~ghIpgainip~~~-----------------l~~~~~~l~~   63 (109)
T cd01533          10 PSVSADELAALQARGAPLVVLDGR---------RFDEYRKMTIPGSVSCPGAE-----------------LVLRVGELAP   63 (109)
T ss_pred             CcCCHHHHHHHHhcCCCcEEEeCC---------CHHHHhcCcCCCceeCCHHH-----------------HHHHHHhcCC
Confidence            479999999988755 57899999         68999999999999999754                 4456677777


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCc-EEEccCcHHHHHhCC
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASG  200 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~n-V~vLdGG~~~W~~~G  200 (269)
                      +++++|||||.+|.+ +..+++.|+.+||+| |++|+||+.+|..+|
T Consensus        64 ~~~~~ivv~C~~G~r-s~~a~~~L~~~G~~~~v~~l~gG~~~W~~~g  109 (109)
T cd01533          64 DPRTPIVVNCAGRTR-SIIGAQSLINAGLPNPVAALRNGTQGWTLAG  109 (109)
T ss_pred             CCCCeEEEECCCCch-HHHHHHHHHHCCCCcceeEecCCHHHHHhcC
Confidence            888999999999986 678899999999998 999999999999876

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.84  E-value=9e-21  Score=146.95  Aligned_cols=102  Identities=21%  Similarity=0.243  Sum_probs=80.8

Q ss_pred             ccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        78 Is~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ||++||+++++++  +++|||+|         +..+|..||||||+|+|+..+...... ...+|..+.|..       .
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~-~~~~~~~~~~~~-------~   63 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIR---------SSPDFRRGHIEGSINIPFSSVFLKEGE-LEQLPTVPRLEN-------Y   63 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECC---------CHHHHhCCccCCCEeCCHHHhcccccc-cccccchHHHHh-------h
Confidence            6899999999753  68999999         578999999999999999875432111 133444444433       2


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                      .+++||+||..|.+ +.+++++|+.+||+||++|+||+.+|+
T Consensus        64 ~~~~vv~~c~~g~~-s~~~a~~L~~~G~~~v~~l~GG~~a~~  104 (105)
T cd01525          64 KGKIIVIVSHSHKH-AALFAAFLVKCGVPRVCILDGGINALK  104 (105)
T ss_pred             cCCeEEEEeCCCcc-HHHHHHHHHHcCCCCEEEEeCcHHHhc
Confidence            37889999999886 778888999999999999999999996

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.84  E-value=9.9e-21  Score=146.28  Aligned_cols=99  Identities=22%  Similarity=0.319  Sum_probs=79.7

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|++++|.+++++++++|||||         +..+|..||||||+|+|+..+...          ...+.+.+   ..+
T Consensus         2 ~~is~~~l~~~~~~~~~~iiDvR---------~~~e~~~ghi~gA~~ip~~~~~~~----------~~~~~~~~---~~~   59 (101)
T cd01518           2 TYLSPAEWNELLEDPEVVLLDVR---------NDYEYDIGHFKGAVNPDVDTFREF----------PFWLDENL---DLL   59 (101)
T ss_pred             CcCCHHHHHHHHcCCCEEEEEcC---------ChhhhhcCEeccccCCCcccHhHh----------HHHHHhhh---hhc
Confidence            46899999999987789999999         679999999999999998765321          01122221   237


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                      ++++|||||.+|.+ +..+++.|+.+||+||++|+||+.+|.
T Consensus        60 ~~~~ivvyC~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~  100 (101)
T cd01518          60 KGKKVLMYCTGGIR-CEKASAYLKERGFKNVYQLKGGILKYL  100 (101)
T ss_pred             CCCEEEEECCCchh-HHHHHHHHHHhCCcceeeechhHHHHh
Confidence            88999999999987 455667789999999999999999997

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.83  E-value=3.6e-20  Score=139.71  Aligned_cols=99  Identities=32%  Similarity=0.603  Sum_probs=83.6

Q ss_pred             CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCCh
Q 024280           89 EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGI  168 (269)
Q Consensus        89 ~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~  168 (269)
                      +++.+|||+|         +..+|..||||||+|+|+..+........     ...+.+.+...++.++++||+||.+|.
T Consensus         2 ~~~~~ivDvR---------~~~e~~~~hi~ga~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~iv~~c~~g~   67 (100)
T smart00450        2 DEKVVLLDVR---------SPEEYEGGHIPGAVNIPLSELLDRRGELD-----ILEFEELLKRLGLDKDKPVVVYCRSGN   67 (100)
T ss_pred             CCCEEEEECC---------CHHHhccCCCCCceeCCHHHhccCCCCcC-----HHHHHHHHHHcCCCCCCeEEEEeCCCc
Confidence            3568999999         68999999999999999987654322211     127888888999999999999998777


Q ss_pred             HHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCc
Q 024280          169 FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (269)
Q Consensus       169 ~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~p  202 (269)
                      + +.++++.|+.+|+++|++|+||+.+|...|.|
T Consensus        68 ~-a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~~  100 (100)
T smart00450       68 R-SAKAAWLLRELGFKNVYLLDGGYKEWSAAGPP  100 (100)
T ss_pred             H-HHHHHHHHHHcCCCceEEecCCHHHHHhcCCC
Confidence            5 78999999999999999999999999998764

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=99.82  E-value=4.8e-20  Score=167.74  Aligned_cols=127  Identities=22%  Similarity=0.262  Sum_probs=100.9

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCC--CCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQ--RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~--~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      +..+++.+++...+++++.+|||+|..-....  ..+...+..||||||+|+|+.++.+.     +.+.+.+++++.+.+
T Consensus       151 ~~~~~~~~~v~~~~~~~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA~~i~~~~~~~~-----~~~~~~~~l~~~~~~  225 (281)
T PRK11493        151 PEAVVRLTDVLLASHEKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVRE-----GELKTTDELDAIFFG  225 (281)
T ss_pred             ccceecHHHHHHhhcCCCcEEEeCCCccceeeeccCCCCCcccccCCCcCCCCHHHhcCC-----CCcCCHHHHHHHHHh
Confidence            45678888888777766789999993111100  00011234799999999999886531     357778999999999


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh-CCCceecC
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESS  206 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~-~G~pv~~~  206 (269)
                      .|++++++||+||++|.+ |+.++++|+.+||+||++|+||+.+|.. .++|++++
T Consensus       226 ~g~~~~~~ii~yC~~G~~-A~~~~~~l~~~G~~~v~~y~Gs~~eW~~~~~~P~~~~  280 (281)
T PRK11493        226 RGVSFDRPIIASCGSGVT-AAVVVLALATLDVPNVKLYDGAWSEWGARADLPVEPA  280 (281)
T ss_pred             cCCCCCCCEEEECCcHHH-HHHHHHHHHHcCCCCceeeCCCHHHHccCCCCCcCCC
Confidence            999999999999999886 8889999999999999999999999998 79999865

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=99.82  E-value=5.3e-20  Score=183.26  Aligned_cols=129  Identities=19%  Similarity=0.288  Sum_probs=104.8

Q ss_pred             CCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        73 ~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ....+++.+|+.+++++++++|||+|......... ...+..||||||+|+|+..+.+..    +.+++.+++++++.++
T Consensus       144 ~~~~~v~~e~v~~~l~~~~~~iIDaR~~~ef~G~~-~~~~r~GHIPGAvnip~~~~~~~~----~~lk~~~el~~~~~~~  218 (610)
T PRK09629        144 HDEPTATREYLQSRLGAADLAIWDARAPTEYSGEK-VVAAKGGHIPGAVNFEWTAGMDKA----RNLRIRQDMPEILRDL  218 (610)
T ss_pred             CCcccccHHHHHHhhCCCCcEEEECCCccccCCcc-cccccCCCCCCCeecCHHHhcCCC----CCCCCHHHHHHHHHHc
Confidence            34568999999999988888999999321111100 112357999999999997654432    4578899999999999


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhC-CCceecCC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVESSA  207 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~-G~pv~~~~  207 (269)
                      ||+++++||+||++|.+ |+++||+|+.+||+||++|||||.+|... ++|+++..
T Consensus       219 Gi~~~~~VVvYC~sG~r-Aa~~~~~L~~lG~~~V~~YdGsw~eW~~~~~lPv~~~~  273 (610)
T PRK09629        219 GITPDKEVITHCQTHHR-SGFTYLVAKALGYPRVKAYAGSWGEWGNHPDTPVEVPT  273 (610)
T ss_pred             CCCCCCCEEEECCCChH-HHHHHHHHHHcCCCCcEEeCCCHHHHhCCCCCccccCC
Confidence            99999999999999874 89999999999999999999999999984 78999754

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.82  E-value=6.3e-20  Score=141.27  Aligned_cols=102  Identities=20%  Similarity=0.283  Sum_probs=80.5

Q ss_pred             ccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhH-hhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCC
Q 024280           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (269)
Q Consensus        78 Is~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey-~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~  156 (269)
                      |++++|.+++++++.+|||+|         +..+| ..||||||+|+|+..+.......           ..+...++++
T Consensus         1 is~~el~~~~~~~~~~iiDvR---------~~~~~~~~ghIpga~~ip~~~~~~~~~~~-----------~~~~~~~~~~   60 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVR---------DPRELERTGMIPGAFHAPRGMLEFWADPD-----------SPYHKPAFAE   60 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECC---------CHHHHHhcCCCCCcEEcccchhhhhcCcc-----------ccccccCCCC
Confidence            688999999877778999999         56777 67999999999976543110000           0111235789


Q ss_pred             CCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCC
Q 024280          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (269)
Q Consensus       157 d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G  200 (269)
                      +++|||||.+|.+ +.+++++|+.+||+||++|+||+.+|..+|
T Consensus        61 ~~~ivv~c~~g~~-s~~~~~~l~~~G~~~v~~l~Gg~~~w~~~g  103 (103)
T cd01447          61 DKPFVFYCASGWR-SALAGKTLQDMGLKPVYNIEGGFKDWKEAG  103 (103)
T ss_pred             CCeEEEEcCCCCc-HHHHHHHHHHcChHHhEeecCcHHHHhhcC
Confidence            9999999998876 788999999999999999999999998764

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.82  E-value=9.3e-20  Score=140.06  Aligned_cols=97  Identities=22%  Similarity=0.331  Sum_probs=83.1

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCC
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~  156 (269)
                      .|++++|.++++++ .+|||+|         +..+|..||||||+|+|+..+....                   ..+++
T Consensus         3 ~i~~~el~~~~~~~-~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~~~-------------------~~~~~   53 (99)
T cd01527           3 TISPNDACELLAQG-AVLVDIR---------EPDEYLRERIPGARLVPLSQLESEG-------------------LPLVG   53 (99)
T ss_pred             ccCHHHHHHHHHCC-CEEEECC---------CHHHHHhCcCCCCEECChhHhcccc-------------------cCCCC
Confidence            58999999988765 8999999         6899999999999999987653210                   12477


Q ss_pred             CCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCce
Q 024280          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       157 d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      +++||+||++|.+ +..++..|+.+||++|++|+||+.+|+..|+|+
T Consensus        54 ~~~iv~~c~~g~~-s~~~~~~L~~~g~~~v~~l~gG~~~W~~~~~~~   99 (99)
T cd01527          54 ANAIIFHCRSGMR-TQQNAERLAAISAGEAYVLEGGLDAWKAAGLPV   99 (99)
T ss_pred             CCcEEEEeCCCch-HHHHHHHHHHcCCccEEEeeCCHHHHHHCcCCC
Confidence            8999999999886 777889999999999999999999999999875

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.81  E-value=1.2e-19  Score=142.06  Aligned_cols=102  Identities=23%  Similarity=0.323  Sum_probs=87.6

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|++++|.+.+++.+.+|||+|         +..+|..||||||+|+|+.                 .|.+++..+  +
T Consensus         5 ~~is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghi~gA~~ip~~-----------------~l~~~~~~~--~   56 (108)
T PRK00162          5 ECINVEQAHQKLQEGGAVLVDIR---------DPQSFAMGHAPGAFHLTND-----------------SLGAFMRQA--D   56 (108)
T ss_pred             cccCHHHHHHHHHcCCCEEEEcC---------CHHHHhcCCCCCCeECCHH-----------------HHHHHHHhc--C
Confidence            46899999999876678999999         6899999999999999864                 355566554  6


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~  206 (269)
                      ++.++||||..|.+ +..+...|+..||+||++|+||+.+|+..++|++..
T Consensus        57 ~~~~ivv~c~~g~~-s~~a~~~L~~~G~~~v~~l~GG~~~w~~~~~~~~~~  106 (108)
T PRK00162         57 FDTPVMVMCYHGNS-SQGAAQYLLQQGFDVVYSIDGGFEAWRRTFPAEVAS  106 (108)
T ss_pred             CCCCEEEEeCCCCC-HHHHHHHHHHCCchheEEecCCHHHHHhcCCCccCC
Confidence            78899999998875 677778999999999999999999999999998764

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.81  E-value=1e-19  Score=141.33  Aligned_cols=107  Identities=30%  Similarity=0.559  Sum_probs=83.4

Q ss_pred             cHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC--CCC
Q 024280           79 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG--LEN  156 (269)
Q Consensus        79 s~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG--I~~  156 (269)
                      ||+||++++++++++|||+|         +..+|..||||||+|+|+..+     .........+.+...+...+  +++
T Consensus         1 s~~el~~~l~~~~~~liD~R---------~~~~~~~~hI~ga~~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~   66 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVR---------SPEEYERGHIPGAVNIPFPSL-----DPDEPSLSEDKLDEFLKELGKKIDK   66 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEES---------SHHHHHHSBETTEEEEEGGGG-----SSSSSBCHHHHHHHHHHHHTHGSTT
T ss_pred             CHHHHHhhhhCCCeEEEEeC---------CHHHHHcCCCCCCcccccccc-----ccccccccccccccccccccccccc
Confidence            68999999977789999999         789999999999999999776     11233445566666555554  488


Q ss_pred             CCcEEEeCCCChHH----HHHHHHHHHHcCCCcEEEccCcHHHHHhC
Q 024280          157 KDGLVVYDGKGIFS----AARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       157 d~~VVvY~~~g~~~----A~ra~~~L~~~G~~nV~vLdGG~~~W~~~  199 (269)
                      ++.||+||..|..+    +.+.+|+|+.+||++|++|+||+.+|.++
T Consensus        67 ~~~iv~yc~~~~~~~~~~~~~~~~~l~~~g~~~v~~l~GG~~~w~~~  113 (113)
T PF00581_consen   67 DKDIVFYCSSGWRSGSAAAARVAWILKKLGFKNVYILDGGFEAWKAE  113 (113)
T ss_dssp             TSEEEEEESSSCHHHHHHHHHHHHHHHHTTTSSEEEETTHHHHHHHH
T ss_pred             cccceeeeecccccchhHHHHHHHHHHHcCCCCEEEecChHHHHhcC
Confidence            89999999665542    33345569999999999999999999863

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.81  E-value=9.9e-20  Score=143.11  Aligned_cols=100  Identities=23%  Similarity=0.359  Sum_probs=83.5

Q ss_pred             CcccHHHHHHhhCC--CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           76 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        76 ~lIs~~eL~~~l~~--~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      .-|++++|.+++.+  ++.+|||+|         +..+|..||||||+|+|+..+..                +.  ..+
T Consensus         8 ~~~s~~el~~~l~~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~l~~----------------~~--~~~   60 (110)
T cd01521           8 FETDCWDVAIALKNGKPDFVLVDVR---------SAEAYARGHVPGAINLPHREICE----------------NA--TAK   60 (110)
T ss_pred             eecCHHHHHHHHHcCCCCEEEEECC---------CHHHHhcCCCCCCEeCCHHHhhh----------------Hh--hhc
Confidence            46899999999875  358999999         57899999999999999765421                01  135


Q ss_pred             CCCCCcEEEeCCCCh-HHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCce
Q 024280          154 LENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       154 I~~d~~VVvY~~~g~-~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      ++++++|||||++|. ..+.++++.|+.+||+ |++|+||+.+|+.+|+|+
T Consensus        61 i~~~~~vvvyc~~g~~~~s~~~a~~l~~~G~~-v~~l~GG~~~W~~~g~~~  110 (110)
T cd01521          61 LDKEKLFVVYCDGPGCNGATKAALKLAELGFP-VKEMIGGLDWWKREGYAT  110 (110)
T ss_pred             CCCCCeEEEEECCCCCchHHHHHHHHHHcCCe-EEEecCCHHHHHHCCCCC
Confidence            788999999999864 3589999999999995 999999999999999875

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.80  E-value=1.5e-19  Score=144.72  Aligned_cols=110  Identities=19%  Similarity=0.228  Sum_probs=88.5

Q ss_pred             CCCcccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           74 KEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      +...|++++|.+++++ .+.+|||+|         +..+|..||||||+|+|+..+.+....    ++..     ++...
T Consensus         6 ~~~~is~~el~~~~~~~~~~~ivDvR---------~~~e~~~~hIpgai~ip~~~~~~~~~~----~~~~-----~~~~~   67 (122)
T cd01526           6 PEERVSVKDYKNILQAGKKHVLLDVR---------PKVHFEICRLPEAINIPLSELLSKAAE----LKSL-----QELPL   67 (122)
T ss_pred             cccccCHHHHHHHHhCCCCeEEEEcC---------CHHHhhcccCCCCeEccHHHHhhhhhh----hhhh-----hhccc
Confidence            4457999999998876 568899999         689999999999999998876432111    1111     34456


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCC-CcEEEccCcHHHHHhCCCc
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGH-DRVWVLDGGLPRWRASGYD  202 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~-~nV~vLdGG~~~W~~~G~p  202 (269)
                      +++++++||+||.+|.+ +..++.+|+.+|| ++|++|+||+.+|..+..+
T Consensus        68 ~~~~~~~ivv~C~~G~r-s~~aa~~L~~~G~~~~v~~l~GG~~~W~~~~~~  117 (122)
T cd01526          68 DNDKDSPIYVVCRRGND-SQTAVRKLKELGLERFVRDIIGGLKAWADKVDP  117 (122)
T ss_pred             ccCCCCcEEEECCCCCc-HHHHHHHHHHcCCccceeeecchHHHHHHHhCc
Confidence            78999999999999876 7788889999999 7999999999999976543

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.80  E-value=3.1e-19  Score=162.08  Aligned_cols=124  Identities=23%  Similarity=0.413  Sum_probs=108.9

Q ss_pred             CCCCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhh----------CCCCCCeeccccccccccCCCCCCC
Q 024280           70 SVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------AHIPGALFFDVDGVADRTTNLPHML  139 (269)
Q Consensus        70 ~~~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~----------gHIPGAi~ip~~~l~~~~~~~~~~l  139 (269)
                      ...+...+++.++++..++.+..+|||+|         +.++|..          ||||||+|+|+..+.+.    .+.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~liDaR---------~~~rf~G~~~ep~~~~~GHIPGAiNipw~~~~~~----~~~~  216 (285)
T COG2897         150 AKYNVKAVVDATLVADALEVPAVLLIDAR---------SPERFRGKEPEPRDGKAGHIPGAINIPWTDLVDD----GGLF  216 (285)
T ss_pred             ccCCccccCCHHHHHHHhcCCCeEEEecC---------CHHHhCCCCCCCCCCCCCCCCCCcCcCHHHHhcC----CCcc
Confidence            33456778999999999998889999999         5778877          99999999999987762    3578


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhC-CCceecCC
Q 024280          140 PSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVESSA  207 (269)
Q Consensus       140 p~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~-G~pv~~~~  207 (269)
                      .+.++++.++...||+.+++||+||++|.+ |+-.|+.|+.+|+.++++|||++..|.+. +.|++++.
T Consensus       217 ~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~-As~~~~al~~lg~~~~~lYdGSWsEWg~~~~~PV~~g~  284 (285)
T COG2897         217 KSPEEIARLYADAGIDPDKEVIVYCGSGVR-ASVTWLALAELGGPNNRLYDGSWSEWGSDPDRPVETGE  284 (285)
T ss_pred             CcHHHHHHHHHhcCCCCCCCEEEEcCCchH-HHHHHHHHHHhCCCCcccccChHHHhhcCCCCccccCC
Confidence            889999999999999999999999999986 88899999999999999999999999985 56888764

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.80  E-value=2.5e-19  Score=137.07  Aligned_cols=93  Identities=22%  Similarity=0.272  Sum_probs=73.7

Q ss_pred             ccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        78 Is~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      |++++|.+++++.  +++|||+|         +..+|..||||||+|+|+..+..                 .+..+--.
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghipga~~ip~~~l~~-----------------~~~~~~~~   54 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVR---------TPEEYEAGHLPGFRHTPGGQLVQ-----------------ETDHFAPV   54 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECC---------CHHHHHhCCCCCcEeCCHHHHHH-----------------HHHHhccc
Confidence            6889999988654  57899999         68999999999999999765422                 11111112


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      ++++||+||.+|.+ +..+++.|+.+||+ |++|+||+.+|.+
T Consensus        55 ~~~~iv~~c~~G~r-s~~aa~~L~~~G~~-v~~l~GG~~~W~~   95 (95)
T cd01534          55 RGARIVLADDDGVR-ADMTASWLAQMGWE-VYVLEGGLAAALA   95 (95)
T ss_pred             CCCeEEEECCCCCh-HHHHHHHHHHcCCE-EEEecCcHHHhcC
Confidence            46889999999987 55667778999999 9999999999973

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>PLN02160 thiosulfate sulfurtransferase

Probab=99.80  E-value=8e-19  Score=143.68  Aligned_cols=114  Identities=18%  Similarity=0.171  Sum_probs=90.1

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCC--eeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA--LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGA--i~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..|+++++.++++++ .+|||||         ...+|..||||||  +|+|+..+. +.    ..+.+.+...+ +.. .
T Consensus        15 ~~i~~~e~~~~~~~~-~~lIDVR---------~~~E~~~ghIpgA~~iniP~~~~~-~~----~~l~~~~~~~~-~~~-~   77 (136)
T PLN02160         15 VSVDVSQAKTLLQSG-HQYLDVR---------TQDEFRRGHCEAAKIVNIPYMLNT-PQ----GRVKNQEFLEQ-VSS-L   77 (136)
T ss_pred             eEeCHHHHHHHHhCC-CEEEECC---------CHHHHhcCCCCCcceecccchhcC-cc----cccCCHHHHHH-HHh-c
Confidence            468999999988654 6899999         6899999999999  899975432 11    12333332222 322 2


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCC
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~  207 (269)
                      ++++++||+||++|.+ |..++..|...||++|++|+||+.+|..+|+|+.+..
T Consensus        78 ~~~~~~IivyC~sG~R-S~~Aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  130 (136)
T PLN02160         78 LNPADDILVGCQSGAR-SLKATTELVAAGYKKVRNKGGGYLAWVDHSFPINQEE  130 (136)
T ss_pred             cCCCCcEEEECCCcHH-HHHHHHHHHHcCCCCeeecCCcHHHHhhCCCCccccc
Confidence            5788999999999986 7888899999999999999999999999999999865

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.79  E-value=4.5e-19  Score=136.97  Aligned_cols=94  Identities=22%  Similarity=0.343  Sum_probs=77.2

Q ss_pred             ccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC-
Q 024280           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL-  154 (269)
Q Consensus        78 Is~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI-  154 (269)
                      |++++|.++++.+  +.+|||+|         +..+|..+|||||+|+|+..+.                 +++..++. 
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR---------~~~e~~~~hI~ga~~ip~~~~~-----------------~~~~~~~~~   55 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVR---------EPEELEIAFLPGFLHLPMSEIP-----------------ERSKELDSD   55 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECC---------CHHHHhcCcCCCCEecCHHHHH-----------------HHHHHhccc
Confidence            7899999998764  58999999         6899999999999999986542                 22233322 


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      +++++||+||++|.+ |+++++.|..+||++|++|+||+.+|..
T Consensus        56 ~~~~~vv~~c~~g~r-s~~~~~~l~~~G~~~v~~l~GG~~~w~~   98 (101)
T cd01528          56 NPDKDIVVLCHHGGR-SMQVAQWLLRQGFENVYNLQGGIDAWSL   98 (101)
T ss_pred             CCCCeEEEEeCCCch-HHHHHHHHHHcCCccEEEecCCHHHHhh
Confidence            568999999999876 6777788888999999999999999975

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=8.3e-19  Score=134.28  Aligned_cols=94  Identities=26%  Similarity=0.393  Sum_probs=73.3

Q ss_pred             HHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCc
Q 024280           80 VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG  159 (269)
Q Consensus        80 ~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~  159 (269)
                      ++||.+.  +++.+|||+|         +..+|..||||||+|+|+..+.          +..+.++. ++.  ++++++
T Consensus         3 ~~~l~~~--~~~~~iiDvR---------~~~~~~~~hIpgA~~ip~~~~~----------~~~~~~~~-~~~--~~~~~~   58 (96)
T cd01529           3 ADWLGEH--EPGTALLDVR---------AEDEYAAGHLPGKRSIPGAALV----------LRSQELQA-LEA--PGRATR   58 (96)
T ss_pred             hHHHhcC--CCCeEEEeCC---------CHHHHcCCCCCCcEeCCHHHhc----------CCHHHHHH-hhc--CCCCCC
Confidence            4666653  4568999999         5789999999999999976542          22334443 332  478899


Q ss_pred             EEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          160 LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       160 VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      ||+||.+|.+ +.++++.|+.+||+||++|+||+.+|.+
T Consensus        59 ivv~c~~g~~-s~~~~~~l~~~G~~~v~~l~GG~~~W~~   96 (96)
T cd01529          59 YVLTCDGSLL-ARFAAQELLALGGKPVALLDGGTSAWVA   96 (96)
T ss_pred             EEEEeCChHH-HHHHHHHHHHcCCCCEEEeCCCHHHhcC
Confidence            9999998876 5666777899999999999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=9.2e-19  Score=140.46  Aligned_cols=98  Identities=17%  Similarity=0.220  Sum_probs=78.1

Q ss_pred             cccHHHHHHhhCCC------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccc-ccccccCCCCCCCCCHHHHHHHH
Q 024280           77 VVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD-GVADRTTNLPHMLPSEEAFAAAV  149 (269)
Q Consensus        77 lIs~~eL~~~l~~~------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~-~l~~~~~~~~~~lp~~~~f~~~l  149 (269)
                      .|+++++.+++.++      +++|||||         ...+|..||||||+|+|+. .+..             .+.+..
T Consensus         3 ~Is~~el~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghI~gA~~ip~~~~l~~-------------~~~~~~   60 (121)
T cd01530           3 RISPETLARLLQGKYDNFFDKYIIIDCR---------FPYEYNGGHIKGAVNLSTKDELEE-------------FFLDKP   60 (121)
T ss_pred             ccCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHhCCcCCCCEeCCcHHHHHH-------------HHHHhh
Confidence            48999999998653      68999999         6789999999999999975 2221             111111


Q ss_pred             HHcCCCCCCcEEEeCC-CChHHHHHHHHHHHHc------------CCCcEEEccCcHHHHH
Q 024280          150 SALGLENKDGLVVYDG-KGIFSAARVWWMFRVF------------GHDRVWVLDGGLPRWR  197 (269)
Q Consensus       150 ~~lGI~~d~~VVvY~~-~g~~~A~ra~~~L~~~------------G~~nV~vLdGG~~~W~  197 (269)
                      ..++++++++||+||. +|.+ ++++++.|+.+            ||++|++|+||+.+|.
T Consensus        61 ~~~~~~~~~~vv~yC~~sg~r-s~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~  120 (121)
T cd01530          61 GVASKKKRRVLIFHCEFSSKR-GPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFF  120 (121)
T ss_pred             cccccCCCCEEEEECCCcccc-HHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhc
Confidence            2356889999999997 7765 78888899874            9999999999999984

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=1.8e-18  Score=131.66  Aligned_cols=91  Identities=32%  Similarity=0.449  Sum_probs=78.2

Q ss_pred             ccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhh--CCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV--AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        78 Is~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~--gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      |+++++.+++++ .+.+|||+|         +..+|..  ||||||+|+|+..+                 .+++..  +
T Consensus         2 i~~~~~~~~~~~~~~~~ivDvR---------~~~e~~~~~~hi~ga~~ip~~~~-----------------~~~~~~--~   53 (96)
T cd01444           2 ISVDELAELLAAGEAPVLLDVR---------DPASYAALPDHIPGAIHLDEDSL-----------------DDWLGD--L   53 (96)
T ss_pred             cCHHHHHHHHhcCCCcEEEECC---------CHHHHhcccCCCCCCeeCCHHHH-----------------HHHHhh--c
Confidence            688999998876 468999999         6789999  99999999997643                 334433  5


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                      +++++|||||..|.+ +.++++.|+.+||+||++|+||+.+|.
T Consensus        54 ~~~~~ivv~c~~g~~-s~~a~~~l~~~G~~~v~~l~gG~~~w~   95 (96)
T cd01444          54 DRDRPVVVYCYHGNS-SAQLAQALREAGFTDVRSLAGGFEAWR   95 (96)
T ss_pred             CCCCCEEEEeCCCCh-HHHHHHHHHHcCCceEEEcCCCHHHhc
Confidence            789999999997775 889999999999999999999999996

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=2.2e-18  Score=130.55  Aligned_cols=89  Identities=22%  Similarity=0.336  Sum_probs=75.1

Q ss_pred             ccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024280           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  157 (269)
Q Consensus        78 Is~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d  157 (269)
                      +++++|.+++ .++.+|||+|         +..+|..||||||+|+|+.+                 |.+.++.  ++++
T Consensus         1 ~~~~e~~~~~-~~~~~iiD~R---------~~~~~~~~hipgA~~ip~~~-----------------~~~~~~~--~~~~   51 (90)
T cd01524           1 VQWHELDNYR-ADGVTLIDVR---------TPQEFEKGHIKGAINIPLDE-----------------LRDRLNE--LPKD   51 (90)
T ss_pred             CCHHHHHHHh-cCCCEEEECC---------CHHHHhcCCCCCCEeCCHHH-----------------HHHHHHh--cCCC
Confidence            4789999988 4567899999         68999999999999999754                 3334443  5778


Q ss_pred             CcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          158 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       158 ~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                      ++||+||+.|.+ +..++..|+.+|+ +|++|+||+.+|+
T Consensus        52 ~~vvl~c~~g~~-a~~~a~~L~~~G~-~v~~l~GG~~~w~   89 (90)
T cd01524          52 KEIIVYCAVGLR-GYIAARILTQNGF-KVKNLDGGYKTYS   89 (90)
T ss_pred             CcEEEEcCCChh-HHHHHHHHHHCCC-CEEEecCCHHHhc
Confidence            999999998765 7888899999999 8999999999996

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.76  E-value=3.7e-18  Score=141.21  Aligned_cols=97  Identities=30%  Similarity=0.390  Sum_probs=80.5

Q ss_pred             HHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 024280           83 LHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLV  161 (269)
Q Consensus        83 L~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VV  161 (269)
                      |.+++.+ .+++|||+|         +..+|..||||||+|++..                 .|.+.+..+  .++++||
T Consensus         2 l~~~l~~~~~~~ivDvR---------~~~e~~~gHIpgAi~~~~~-----------------~l~~~l~~l--~~~~~vV   53 (145)
T cd01535           2 LAAWLGEGGQTAVVDVT---------ASANYVKRHIPGAWWVLRA-----------------QLAQALEKL--PAAERYV   53 (145)
T ss_pred             hHHHHhCCCCeEEEECC---------CHHHHHcCCCCCceeCCHH-----------------HHHHHHHhc--CCCCCEE
Confidence            3444543 358999999         6899999999999999743                 466667765  4578999


Q ss_pred             EeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          162 VYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       162 vY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      |||.+|. .|..+++.|+.+||++|++|+||+.+|+.+|+|++++.+
T Consensus        54 v~c~~g~-~a~~aa~~L~~~G~~~v~~L~GG~~aW~~~g~pl~~~~~   99 (145)
T cd01535          54 LTCGSSL-LARFAAADLAALTVKPVFVLEGGTAAWIAAGLPVESGET   99 (145)
T ss_pred             EEeCCCh-HHHHHHHHHHHcCCcCeEEecCcHHHHHHCCCCcccCCC
Confidence            9999875 488899999999999999999999999999999998643

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.76  E-value=3.4e-18  Score=131.68  Aligned_cols=98  Identities=22%  Similarity=0.141  Sum_probs=77.4

Q ss_pred             ccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCC
Q 024280           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (269)
Q Consensus        78 Is~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~  156 (269)
                      |++++|.+++++ .+.+|||+|         +..+|..||||||+|+|+..+....      +   ....+.+..  +++
T Consensus         1 is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~~------~---~~~~~~~~~--~~~   60 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVR---------NESDYERWKIDGENNTPYFDPYFDF------L---EIEEDILDQ--LPD   60 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeC---------CHHHHhhcccCCCcccccccchHHH------H---HhhHHHHhh--CCC
Confidence            688999998876 458999999         6899999999999999987642210      0   001223333  468


Q ss_pred             CCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       157 d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                      +++|||||..|.+ +..++..|+.+||+ ++.|.||+.+|.
T Consensus        61 ~~~ivv~C~~G~r-s~~aa~~L~~~G~~-~~~l~GG~~~W~   99 (100)
T cd01523          61 DQEVTVICAKEGS-SQFVAELLAERGYD-VDYLAGGMKAWS   99 (100)
T ss_pred             CCeEEEEcCCCCc-HHHHHHHHHHcCce-eEEeCCcHHhhc
Confidence            8999999999886 77888899999999 999999999996

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.75  E-value=3.1e-18  Score=136.37  Aligned_cols=103  Identities=16%  Similarity=0.110  Sum_probs=84.7

Q ss_pred             ccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHh-hCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQ-VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        78 Is~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~-~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ||++++++++++ ++.+|||+|         +..+|. .||||||+|+|+..+..       ..+. ..|...+..+. +
T Consensus         1 is~~el~~~l~~~~~~~vIDvR---------~~~e~~~~ghIpgA~~ip~~~~~~-------~~~~-~~~~~~l~~~~-~   62 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVR---------TEAEWKFVGGVPDAVHVAWQVYPD-------MEIN-PNFLAELEEKV-G   62 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECC---------CHHHHhcccCCCCceecchhhccc-------cccC-HHHHHHHHhhC-C
Confidence            689999999977 578999999         689999 99999999999887532       1122 24555555553 7


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~  199 (269)
                      ++++||+||.+|.+ |..+++.|+.+||+||+.|.||+.+|+..
T Consensus        63 ~~~~ivv~C~~G~r-s~~aa~~L~~~G~~~v~~l~gG~~~~~~~  105 (117)
T cd01522          63 KDRPVLLLCRSGNR-SIAAAEAAAQAGFTNVYNVLEGFEGDLDA  105 (117)
T ss_pred             CCCeEEEEcCCCcc-HHHHHHHHHHCCCCeEEECcCceecCCCC
Confidence            88999999998875 78889999999999999999999999874

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.75  E-value=6.4e-18  Score=157.93  Aligned_cols=157  Identities=18%  Similarity=0.162  Sum_probs=107.2

Q ss_pred             cHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccc---------cC-----CCCCCCCCHHH
Q 024280           79 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR---------TT-----NLPHMLPSEEA  144 (269)
Q Consensus        79 s~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~---------~~-----~~~~~lp~~~~  144 (269)
                      ...++.+.+. ++.+|||||         .+.||..||||||+|+|+.+....         .+     ...+.+++.+.
T Consensus         4 ~~~~~~~~~~-~~~~lIDVR---------sp~Ef~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~~~l   73 (345)
T PRK11784          4 DAQDFRALFL-NDTPLIDVR---------SPIEFAEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVAGNI   73 (345)
T ss_pred             cHHHHHHHHh-CCCEEEECC---------CHHHHhcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcchhH
Confidence            4566776653 468999999         689999999999999998643211         01     02234454322


Q ss_pred             HHHHHHHcCC--CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHH
Q 024280          145 FAAAVSALGL--ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAI  222 (269)
Q Consensus       145 f~~~l~~lGI--~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~  222 (269)
                      .....+.++.  +++++|||||..|+..|.+++|+|+.+|| +|++|+||+.+|+..+++.....+              
T Consensus        74 ~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~G~-~v~~L~GG~~awr~~~~~~~~~~~--------------  138 (345)
T PRK11784         74 AAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEAGI-DVPRLEGGYKAYRRFVIDTLEEAP--------------  138 (345)
T ss_pred             HHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHcCC-CcEEEcCCHHHHHHhhHHHHhhhc--------------
Confidence            2222222222  47889999996443458889999999999 599999999999998886554321              


Q ss_pred             HHhhcCCCCCcccccccCCccccCHHHHHHHhhCCCcEEEccCCCCC
Q 024280          223 EKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR  269 (269)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~r  269 (269)
                              .+..|. .+......+..+|+.++.+.+.++||.|+..+
T Consensus       139 --------~~~~~i-vl~G~TGsGKT~iL~~L~~~~~~vlDlE~~ae  176 (345)
T PRK11784        139 --------AQFPLV-VLGGNTGSGKTELLQALANAGAQVLDLEGLAN  176 (345)
T ss_pred             --------ccCceE-ecCCCCcccHHHHHHHHHhcCCeEEECCchhh
Confidence                    111221 12323457789999999888899999998753

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.74  E-value=1.1e-17  Score=158.30  Aligned_cols=105  Identities=18%  Similarity=0.213  Sum_probs=90.7

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|++++|.+++++ +.+|||+|         +..+|..||||||+|+|+..                 +.+.+..++++
T Consensus         3 ~~is~~el~~~l~~-~~~ivDvR---------~~~e~~~ghIpgAi~ip~~~-----------------l~~~~~~~~~~   55 (376)
T PRK08762          3 REISPAEARARAAQ-GAVLIDVR---------EAHERASGQAEGALRIPRGF-----------------LELRIETHLPD   55 (376)
T ss_pred             ceeCHHHHHHHHhC-CCEEEECC---------CHHHHhCCcCCCCEECCHHH-----------------HHHHHhhhcCC
Confidence            35899999999865 48999999         68999999999999999754                 34455555668


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      ++++||+||++|.+ +.++++.|+.+||+||++|+||+.+|+..|+|++....
T Consensus        56 ~~~~IvvyC~~G~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  107 (376)
T PRK08762         56 RDREIVLICASGTR-SAHAAATLRELGYTRVASVAGGFSAWKDAGLPLERPRL  107 (376)
T ss_pred             CCCeEEEEcCCCcH-HHHHHHHHHHcCCCceEeecCcHHHHHhcCCccccccC
Confidence            89999999998876 77899999999999999999999999999999997654

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.74  E-value=1.1e-17  Score=127.50  Aligned_cols=87  Identities=23%  Similarity=0.290  Sum_probs=69.2

Q ss_pred             hhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCC
Q 024280           86 NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG  165 (269)
Q Consensus        86 ~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~  165 (269)
                      ++++++++|||+|         +..+|..||||||+|+|+..+...                ....+ .+++++|||||.
T Consensus         5 ~~~~~~~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~~----------------~~~~~-~~~~~~ivl~c~   58 (92)
T cd01532           5 LLAREEIALIDVR---------EEDPFAQSHPLWAANLPLSRLELD----------------AWVRI-PRRDTPIVVYGE   58 (92)
T ss_pred             hhcCCCeEEEECC---------CHHHHhhCCcccCeeCCHHHHHhh----------------hHhhC-CCCCCeEEEEeC
Confidence            4455678999999         689999999999999997754211                00111 135889999999


Q ss_pred             CChHH-HHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          166 KGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       166 ~g~~~-A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      +|.++ +.+++++|+..||++|++|+||+.+|.+
T Consensus        59 ~G~~~~s~~aa~~L~~~G~~~v~~l~GG~~~W~~   92 (92)
T cd01532          59 GGGEDLAPRAARRLSELGYTDVALLEGGLQGWRA   92 (92)
T ss_pred             CCCchHHHHHHHHHHHcCccCEEEccCCHHHHcC
Confidence            98653 7899999999999999999999999973

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=99.74  E-value=2.2e-17  Score=152.34  Aligned_cols=143  Identities=16%  Similarity=0.184  Sum_probs=97.6

Q ss_pred             CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccccccccc---------CCC-----CCCCC---CHHHHHHHHHHcC
Q 024280           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT---------TNL-----PHMLP---SEEAFAAAVSALG  153 (269)
Q Consensus        91 ~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~---------~~~-----~~~lp---~~~~f~~~l~~lG  153 (269)
                      +..|||||         .+.||..||||||+|+|+.+.....         +..     ...+.   -.+.+.+++... 
T Consensus         2 ~~~liDVR---------sp~Ef~~ghipgAiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~-   71 (311)
T TIGR03167         2 FDPLIDVR---------SPAEFAEGHLPGAINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFA-   71 (311)
T ss_pred             CCEEEECC---------CHHHHhcCCCcCCEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhc-
Confidence            35899999         6899999999999999985422110         000     00000   011233333332 


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCc
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPT  233 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  233 (269)
                       +++..|||||..++..|.+++|.|+.+|| +|++|+||+.+|+..+.+.....+.                      +.
T Consensus        72 -~~~~~vvvyC~~gG~RS~~aa~~L~~~G~-~v~~L~GG~~aw~~~~~~~~~~~~~----------------------~~  127 (311)
T TIGR03167        72 -DGPPQPLLYCWRGGMRSGSLAWLLAQIGF-RVPRLEGGYKAYRRFVIDQLEELPQ----------------------PF  127 (311)
T ss_pred             -CCCCcEEEEECCCChHHHHHHHHHHHcCC-CEEEecChHHHHHHhhhhhhhccCC----------------------CC
Confidence             34456999996443458899999999999 6999999999999999876664321                      11


Q ss_pred             ccccccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          234 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                      .+.. +.....++..+|++.+++.+.++||.|+..
T Consensus       128 ~~~v-l~g~tg~gKt~Ll~~L~~~~~~VvDlr~~a  161 (311)
T TIGR03167       128 PLIV-LGGMTGSGKTELLHALANAGAQVLDLEGLA  161 (311)
T ss_pred             ceec-cCCCCCcCHHHHHHHHhcCCCeEEECCchH
Confidence            1211 333456889999999988889999999864

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.74  E-value=8.5e-18  Score=132.61  Aligned_cols=99  Identities=22%  Similarity=0.341  Sum_probs=75.4

Q ss_pred             CcccHHHHHHhhCC--CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           76 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        76 ~lIs~~eL~~~l~~--~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..|++++|++++..  ++++|||+|         +. +|..||||||+|+|+..+..             .+.++.+.+|
T Consensus         2 ~~is~~~l~~~~~~~~~~~~iiDvR---------~~-e~~~~hi~gA~~ip~~~l~~-------------~~~~~~~~~~   58 (113)
T cd01531           2 SYISPAQLKGWIRNGRPPFQVVDVR---------DE-DYAGGHIKGSWHYPSTRFKA-------------QLNQLVQLLS   58 (113)
T ss_pred             CcCCHHHHHHHHHcCCCCEEEEEcC---------Cc-ccCCCcCCCCEecCHHHHhh-------------CHHHHHHHHh
Confidence            36899999998865  457899999         56 99999999999999886532             2445555566


Q ss_pred             CCCCCcEEEeCC-CChHHHHHHH-HHHHH-------cCCCcEEEccCcHHHHHh
Q 024280          154 LENKDGLVVYDG-KGIFSAARVW-WMFRV-------FGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       154 I~~d~~VVvY~~-~g~~~A~ra~-~~L~~-------~G~~nV~vLdGG~~~W~~  198 (269)
                      ++++++||+||. ++.+ +..+. ++++.       .||.||++|+||+.+|.+
T Consensus        59 ~~~~~~iv~yC~~~~~r-~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~  111 (113)
T cd01531          59 GSKKDTVVFHCALSQVR-GPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWES  111 (113)
T ss_pred             cCCCCeEEEEeecCCcc-hHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHh
Confidence            788899999998 4443 33332 22232       499999999999999986

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.73  E-value=1.7e-17  Score=132.62  Aligned_cols=113  Identities=19%  Similarity=0.235  Sum_probs=96.2

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..++.++++++++.++.++||||         .++||..||||.+||||+....     ..+++. .++|.+.++...-.
T Consensus        23 ~sv~~~qvk~L~~~~~~~llDVR---------epeEfk~gh~~~siNiPy~~~~-----~~~~l~-~~eF~kqvg~~kp~   87 (136)
T KOG1530|consen   23 QSVSVEQVKNLLQHPDVVLLDVR---------EPEEFKQGHIPASINIPYMSRP-----GAGALK-NPEFLKQVGSSKPP   87 (136)
T ss_pred             EEEEHHHHHHHhcCCCEEEEeec---------CHHHhhccCCcceEeccccccc-----cccccC-CHHHHHHhcccCCC
Confidence            46899999999998889999999         6899999999999999986422     123343 55788888887777


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCcee
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~  204 (269)
                      .|+.|||||.+|.+ +-.|.-.|..+||+||.++.|||.+|.+.++|..
T Consensus        88 ~d~eiIf~C~SG~R-s~~A~~~l~s~Gyknv~ny~Gs~~~W~~k~~~~~  135 (136)
T KOG1530|consen   88 HDKEIIFGCASGVR-SLKATKILVSAGYKNVGNYPGSYLAWVDKGGPKK  135 (136)
T ss_pred             CCCcEEEEeccCcc-hhHHHHHHHHcCcccccccCccHHHHHHccCCCC
Confidence            88899999999997 6777788999999999999999999999988753

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=99.73  E-value=6e-18  Score=136.99  Aligned_cols=109  Identities=27%  Similarity=0.388  Sum_probs=82.7

Q ss_pred             cccHHHHHHhhCC--CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccC---C--CCCCCCCHHHHHHHH
Q 024280           77 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT---N--LPHMLPSEEAFAAAV  149 (269)
Q Consensus        77 lIs~~eL~~~l~~--~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~---~--~~~~lp~~~~f~~~l  149 (269)
                      +|+++||.++++.  ++++|||+|         +..+|..||||||+|+|+..+.....   .  ...+++..+.++.+.
T Consensus         1 ~is~~~l~~~l~~~~~~~~iiDvR---------~~~~~~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   71 (132)
T cd01446           1 TIDCAWLAALLREGGERLLLLDCR---------PFLEYSSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRLR   71 (132)
T ss_pred             CcCHHHHHHHHhcCCCCEEEEECC---------CHHHHhhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHHh
Confidence            5899999999975  468999999         68899999999999999886432111   0  112455555554433


Q ss_pred             HHcCCCCCCcEEEeCCCCh-----HHHHHHHHHHHHcCC-----CcEEEccCcHHHHHh
Q 024280          150 SALGLENKDGLVVYDGKGI-----FSAARVWWMFRVFGH-----DRVWVLDGGLPRWRA  198 (269)
Q Consensus       150 ~~lGI~~d~~VVvY~~~g~-----~~A~ra~~~L~~~G~-----~nV~vLdGG~~~W~~  198 (269)
                      . .   ++++|||||+.+.     ..+++++|+++.+|+     .+|++|+||+.+|.+
T Consensus        72 ~-~---~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~  126 (132)
T cd01446          72 R-G---ESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSS  126 (132)
T ss_pred             c-C---CCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHh
Confidence            3 2   6789999998765     346778888888777     789999999999976

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.72  E-value=1.3e-17  Score=124.05  Aligned_cols=88  Identities=32%  Similarity=0.548  Sum_probs=73.1

Q ss_pred             HHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 024280           83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  162 (269)
Q Consensus        83 L~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVv  162 (269)
                      +.+++..++..|||+|         +..+|..||||||+|+|+..+...                 ....+++++++|||
T Consensus         2 ~~~~~~~~~~~iiD~R---------~~~~~~~~~i~ga~~~~~~~~~~~-----------------~~~~~~~~~~~vv~   55 (89)
T cd00158           2 LKELLDDEDAVLLDVR---------EPEEYAAGHIPGAINIPLSELEER-----------------AALLELDKDKPIVV   55 (89)
T ss_pred             hHHHhcCCCeEEEECC---------CHHHHhccccCCCEecchHHHhhH-----------------HHhhccCCCCeEEE
Confidence            4455556679999999         678999999999999998764221                 03456789999999


Q ss_pred             eCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          163 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       163 Y~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                      ||..+.+ +.++++.|+.+||++|++|+||+.+|+
T Consensus        56 ~c~~~~~-a~~~~~~l~~~G~~~v~~l~gG~~~w~   89 (89)
T cd00158          56 YCRSGNR-SARAAKLLRKAGGTNVYNLEGGMLAWK   89 (89)
T ss_pred             EeCCCch-HHHHHHHHHHhCcccEEEecCChhhcC
Confidence            9998764 889999999999999999999999994

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.71  E-value=3e-17  Score=129.55  Aligned_cols=97  Identities=22%  Similarity=0.388  Sum_probs=71.8

Q ss_pred             cccHHHHHHhhCCC------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHH
Q 024280           77 VVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (269)
Q Consensus        77 lIs~~eL~~~l~~~------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~  150 (269)
                      .|++++|+++++++      +++|||||         +. +|..||||||+|+|+..+..             .+.+.+.
T Consensus         3 ~is~~el~~~l~~~~~~~~~~~~iiDvR---------~~-ef~~ghipgAi~ip~~~~~~-------------~~~~~~~   59 (113)
T cd01443           3 YISPEELVALLENSDSNAGKDFVVVDLR---------RD-DYEGGHIKGSINLPAQSCYQ-------------TLPQVYA   59 (113)
T ss_pred             ccCHHHHHHHHhCCccccCCcEEEEECC---------ch-hcCCCcccCceecchhHHHH-------------HHHHHHH
Confidence            58999999999764      58999999         56 99999999999999876532             2233344


Q ss_pred             HcCCCCCCcEEEeCCCC-hHHHHHHH-HHHH---HcCC--CcEEEccCcHHHHH
Q 024280          151 ALGLENKDGLVVYDGKG-IFSAARVW-WMFR---VFGH--DRVWVLDGGLPRWR  197 (269)
Q Consensus       151 ~lGI~~d~~VVvY~~~g-~~~A~ra~-~~L~---~~G~--~nV~vLdGG~~~W~  197 (269)
                      .+...+.++||+||.++ .+ +.+++ |+++   ..|+  .++++|+||+.+|.
T Consensus        60 ~~~~~~~~~iv~~C~~~g~r-s~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~  112 (113)
T cd01443          60 LFSLAGVKLAIFYCGSSQGR-GPRAARWFADYLRKVGESLPKSYILTGGIKAWY  112 (113)
T ss_pred             HhhhcCCCEEEEECCCCCcc-cHHHHHHHHHHHhccCCCCCeEEEECChhhhhc
Confidence            33335567899999974 44 55544 4433   3464  78999999999996

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.68  E-value=2.3e-16  Score=145.87  Aligned_cols=102  Identities=21%  Similarity=0.322  Sum_probs=84.2

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHH-HHc
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV-SAL  152 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l-~~l  152 (269)
                      ....|+++++.+++++++++|||+|         ...||..||||||+|+|+..+.+              |..++ +.+
T Consensus       110 ~~~~is~~el~~~l~~~~~vlIDVR---------~~~E~~~GhI~GAi~ip~~~~~~--------------~~~~l~~~~  166 (314)
T PRK00142        110 VGTYLKPKEVNELLDDPDVVFIDMR---------NDYEYEIGHFENAIEPDIETFRE--------------FPPWVEENL  166 (314)
T ss_pred             CCcccCHHHHHHHhcCCCeEEEECC---------CHHHHhcCcCCCCEeCCHHHhhh--------------hHHHHHHhc
Confidence            3467999999999988889999999         57999999999999999876532              12222 345


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~  199 (269)
                      ++.++++||+||.+|.+ +..+...|+..||++|+.|+||+.+|...
T Consensus       167 ~~~kdk~IvvyC~~G~R-s~~aa~~L~~~Gf~~V~~L~GGi~~w~~~  212 (314)
T PRK00142        167 DPLKDKKVVMYCTGGIR-CEKASAWMKHEGFKEVYQLEGGIITYGED  212 (314)
T ss_pred             CCCCcCeEEEECCCCcH-HHHHHHHHHHcCCCcEEEecchHHHHHHh
Confidence            67789999999999997 45566777889999999999999999873

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.65  E-value=6e-16  Score=120.56  Aligned_cols=81  Identities=16%  Similarity=0.185  Sum_probs=68.9

Q ss_pred             CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCChH
Q 024280           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIF  169 (269)
Q Consensus        90 ~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~~  169 (269)
                      ....+||+|         +.++|..||||||+|+|+.+                 +.+.+..++.+++++|||||.+|.+
T Consensus        17 ~~~~lIDvR---------~~~ef~~ghIpgAinip~~~-----------------l~~~l~~~~~~~~~~vvlyC~~G~r   70 (101)
T TIGR02981        17 AAEHWIDVR---------IPEQYQQEHIQGAINIPLKE-----------------IKEHIATAVPDKNDTVKLYCNAGRQ   70 (101)
T ss_pred             cCCEEEECC---------CHHHHhcCCCCCCEECCHHH-----------------HHHHHHHhCCCCCCeEEEEeCCCHH
Confidence            356899999         68999999999999999754                 4445666666788899999999886


Q ss_pred             HHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          170 SAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       170 ~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                       |..++..|+.+||++|+++ ||+.+|..
T Consensus        71 -S~~aa~~L~~~G~~~v~~~-GG~~~~~~   97 (101)
T TIGR02981        71 -SGMAKDILLDMGYTHAENA-GGIKDIAM   97 (101)
T ss_pred             -HHHHHHHHHHcCCCeEEec-CCHHHhhh
Confidence             7888899999999999986 99999985

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>PRK01415 hypothetical protein; Validated

Probab=99.65  E-value=5.2e-16  Score=138.61  Aligned_cols=103  Identities=18%  Similarity=0.219  Sum_probs=84.8

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHH-Hc
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS-AL  152 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~-~l  152 (269)
                      ....|+++++.+++++++++|||||         ...||..||||||+|+|+..+..              |.+++. ..
T Consensus       110 ~g~~i~p~e~~~ll~~~~~vvIDVR---------n~~E~~~Ghi~gAinip~~~f~e--------------~~~~~~~~~  166 (247)
T PRK01415        110 KGEYIEPKDWDEFITKQDVIVIDTR---------NDYEVEVGTFKSAINPNTKTFKQ--------------FPAWVQQNQ  166 (247)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECC---------CHHHHhcCCcCCCCCCChHHHhh--------------hHHHHhhhh
Confidence            3467999999999988889999999         58999999999999999876532              222221 12


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G  200 (269)
                      .++++++||+||.+|.+ +..+...|+..||++|+.|.||+.+|....
T Consensus       167 ~~~k~k~Iv~yCtgGiR-s~kAa~~L~~~Gf~~Vy~L~GGi~~w~~~~  213 (247)
T PRK01415        167 ELLKGKKIAMVCTGGIR-CEKSTSLLKSIGYDEVYHLKGGILQYLEDT  213 (247)
T ss_pred             hhcCCCeEEEECCCChH-HHHHHHHHHHcCCCcEEEechHHHHHHHhc
Confidence            35788999999999987 677788899999999999999999999743

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.65  E-value=8.1e-16  Score=120.44  Aligned_cols=82  Identities=16%  Similarity=0.201  Sum_probs=70.8

Q ss_pred             CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCCh
Q 024280           89 EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGI  168 (269)
Q Consensus        89 ~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~  168 (269)
                      ..+-+|||+|         +..+|..||||||+|+|+.+                 +.+.++.++.+++++||+||.+|.
T Consensus        18 ~~~~~lIDvR---------~~~ef~~ghIpGAiniP~~~-----------------l~~~l~~l~~~~~~~IVlyC~~G~   71 (104)
T PRK10287         18 FAAEHWIDVR---------VPEQYQQEHVQGAINIPLKE-----------------VKERIATAVPDKNDTVKLYCNAGR   71 (104)
T ss_pred             cCCCEEEECC---------CHHHHhcCCCCccEECCHHH-----------------HHHHHHhcCCCCCCeEEEEeCCCh
Confidence            3456899999         68999999999999999753                 556777788888899999999887


Q ss_pred             HHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          169 FSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       169 ~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      + |..+++.|..+||++|++ .||+.+|..
T Consensus        72 r-S~~aa~~L~~~G~~~v~~-~GG~~~~~~   99 (104)
T PRK10287         72 Q-SGQAKEILSEMGYTHAEN-AGGLKDIAM   99 (104)
T ss_pred             H-HHHHHHHHHHcCCCeEEe-cCCHHHHhh
Confidence            5 788899999999999987 699999975

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.63  E-value=1.3e-15  Score=118.15  Aligned_cols=99  Identities=28%  Similarity=0.462  Sum_probs=79.6

Q ss_pred             HHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCC-CeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCc
Q 024280           81 DWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG-ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG  159 (269)
Q Consensus        81 ~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPG-Ai~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~  159 (269)
                      .........++.+|||+|         ...+|..+|||| ++|+|+.++........                 .+++++
T Consensus        10 ~~~~~~~~~~~~~liDvR---------~~~e~~~~~i~~~~~~ip~~~~~~~~~~~~-----------------~~~~~~   63 (110)
T COG0607          10 DEAALLLAGEDAVLLDVR---------EPEEYERGHIPGAAINIPLSELKAAENLLE-----------------LPDDDP   63 (110)
T ss_pred             HHHHHhhccCCCEEEecc---------ChhHhhhcCCCcceeeeecccchhhhcccc-----------------cCCCCe
Confidence            333344445679999999         569999999999 99999987644211100                 468999


Q ss_pred             EEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecC
Q 024280          160 LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (269)
Q Consensus       160 VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~  206 (269)
                      +||||..|.+ +..+...|+..||++++.|+||+.+|...++|++..
T Consensus        64 ivv~C~~G~r-S~~aa~~L~~~G~~~~~~l~gG~~~w~~~~~~~~~~  109 (110)
T COG0607          64 IVVYCASGVR-SAAAAAALKLAGFTNVYNLDGGIDAWKGAGLPLVRG  109 (110)
T ss_pred             EEEEeCCCCC-hHHHHHHHHHcCCccccccCCcHHHHHhcCCCcccC
Confidence            9999999997 677889999999999999999999999999987653

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.60  E-value=3.5e-15  Score=134.43  Aligned_cols=100  Identities=24%  Similarity=0.335  Sum_probs=79.8

Q ss_pred             CCcccHHHHHHhhCC------CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH
Q 024280           75 EPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~------~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~  148 (269)
                      ...|+++++.+++++      ++.+|||||         ...||+.||||||+|+|+..+..              +..+
T Consensus       109 ~~~is~~el~~~l~~~~~~~~~~~vlIDVR---------~~~E~~~Ghi~GAiniPl~~f~~--------------~~~~  165 (257)
T PRK05320        109 APSVDAATLKRWLDQGHDDAGRPVVMLDTR---------NAFEVDVGTFDGALDYRIDKFTE--------------FPEA  165 (257)
T ss_pred             CceeCHHHHHHHHhccccccCCCeEEEECC---------CHHHHccCccCCCEeCChhHhhh--------------hHHH
Confidence            356999999988765      247999999         68999999999999999876532              2222


Q ss_pred             HHHc-CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          149 VSAL-GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       149 l~~l-GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      +... ...++++||+||.+|.+ +..+...|+..||+||+.|.||+.+|..
T Consensus       166 l~~~~~~~kdk~IvvyC~~G~R-s~~Aa~~L~~~Gf~~V~~L~GGi~~w~~  215 (257)
T PRK05320        166 LAAHRADLAGKTVVSFCTGGIR-CEKAAIHMQEVGIDNVYQLEGGILKYFE  215 (257)
T ss_pred             HHhhhhhcCCCeEEEECCCCHH-HHHHHHHHHHcCCcceEEeccCHHHHHH
Confidence            2221 11268899999999987 7778888999999999999999999986

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.60  E-value=4.2e-15  Score=141.43  Aligned_cols=101  Identities=20%  Similarity=0.324  Sum_probs=83.9

Q ss_pred             CCCcccHHHHHHhhCCC-CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           74 KEPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~-~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ....|++++|+++++++ +++|||+|         +..+|..||||||+|+|+..+...               ..+.  
T Consensus       285 ~~~~Is~~el~~~l~~~~~~~lIDvR---------~~~ef~~ghIpGAinip~~~l~~~---------------~~~~--  338 (392)
T PRK07878        285 AGSTITPRELKEWLDSGKKIALIDVR---------EPVEWDIVHIPGAQLIPKSEILSG---------------EALA--  338 (392)
T ss_pred             CCCccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCCCCCCEEcChHHhcch---------------hHHh--
Confidence            34679999999998754 57899999         689999999999999998765321               0111  


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  201 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~  201 (269)
                      .++++++||+||++|.+ |.++++.|+..||++|++|+||+.+|....-
T Consensus       339 ~l~~d~~iVvyC~~G~r-S~~aa~~L~~~G~~~V~~L~GG~~~W~~~~~  386 (392)
T PRK07878        339 KLPQDRTIVLYCKTGVR-SAEALAALKKAGFSDAVHLQGGVVAWAKQVD  386 (392)
T ss_pred             hCCCCCcEEEEcCCChH-HHHHHHHHHHcCCCcEEEecCcHHHHHHhcC
Confidence            25789999999999886 7889999999999999999999999997653

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.55  E-value=1.7e-14  Score=135.66  Aligned_cols=95  Identities=22%  Similarity=0.346  Sum_probs=78.1

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      ...++++++.+..  .+.+|||+|         +.++|..||||||+|+|+.++....                 ...++
T Consensus       260 ~~~i~~~~~~~~~--~~~~IIDVR---------~~~ef~~ghIpgAinip~~~l~~~~-----------------~~~~~  311 (355)
T PRK05597        260 GEVLDVPRVSALP--DGVTLIDVR---------EPSEFAAYSIPGAHNVPLSAIREGA-----------------NPPSV  311 (355)
T ss_pred             ccccCHHHHHhcc--CCCEEEECC---------CHHHHccCcCCCCEEeCHHHhhhcc-----------------ccccC
Confidence            3478899998654  357899999         6899999999999999987653211                 11235


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      +++++||+||..|.+ +.++++.|+.+||+||++|+||+.+|.+
T Consensus       312 ~~~~~IvvyC~~G~r-S~~Aa~~L~~~G~~nV~~L~GGi~~W~~  354 (355)
T PRK05597        312 SAGDEVVVYCAAGVR-SAQAVAILERAGYTGMSSLDGGIEGWLD  354 (355)
T ss_pred             CCCCeEEEEcCCCHH-HHHHHHHHHHcCCCCEEEecCcHHHHhh
Confidence            788999999999875 8899999999999999999999999975

>PRK07411 hypothetical protein; Validated

Probab=99.52  E-value=4.4e-14  Score=134.37  Aligned_cols=103  Identities=22%  Similarity=0.330  Sum_probs=81.6

Q ss_pred             CCcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           75 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ...|++++|.++++.+  +.+|||+|         +..+|..||||||+|+|+.++....        ..+.+.+     
T Consensus       281 ~~~Is~~el~~~l~~~~~~~vlIDVR---------~~~E~~~ghIpGAiniP~~~l~~~~--------~~~~l~~-----  338 (390)
T PRK07411        281 IPEMTVTELKALLDSGADDFVLIDVR---------NPNEYEIARIPGSVLVPLPDIENGP--------GVEKVKE-----  338 (390)
T ss_pred             cCccCHHHHHHHHhCCCCCeEEEECC---------CHHHhccCcCCCCEEccHHHhhccc--------chHHHhh-----
Confidence            3569999999988654  47899999         6899999999999999988764311        0122222     


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCc
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~p  202 (269)
                       +.++++||+||.+|.+ |.++++.|+.+||++ +.|+||+.+|.++..|
T Consensus       339 -l~~d~~IVvyC~~G~R-S~~aa~~L~~~G~~~-~~l~GG~~~W~~~~~p  385 (390)
T PRK07411        339 -LLNGHRLIAHCKMGGR-SAKALGILKEAGIEG-TNVKGGITAWSREVDP  385 (390)
T ss_pred             -cCCCCeEEEECCCCHH-HHHHHHHHHHcCCCe-EEecchHHHHHHhcCC
Confidence             3578899999999886 788999999999985 5799999999986544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.31  E-value=3.8e-12  Score=120.34  Aligned_cols=93  Identities=22%  Similarity=0.332  Sum_probs=73.6

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCC---CCeeccccccccccCCCCCCCCCHHHHHHHHHHc-
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIP---GALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-  152 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIP---GAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l-  152 (269)
                      .++++++.+++++++.+|||||         ++.||+.||||   ||+|||+..+....           .+   ++.+ 
T Consensus       272 ~~~~~el~~~l~~~~~~lIDVR---------~~~E~~~ghI~~~~gAinIPl~~l~~~~-----------~~---~~~l~  328 (370)
T PRK05600        272 RTDTTSLIDATLNGSATLLDVR---------EPHEVLLKDLPEGGASLKLPLSAITDDA-----------DI---LHALS  328 (370)
T ss_pred             ccCHHHHHHHHhcCCeEEEECC---------CHHHhhhccCCCCCccEeCcHHHhhcch-----------hh---hhhcc
Confidence            5899999999887778999999         68999999998   59999988764211           01   1122 


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCc-EEEccCcHH
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLP  194 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~n-V~vLdGG~~  194 (269)
                      .++++ +|||||.+|.+ +..+...|+..||++ |+.|.||+.
T Consensus       329 ~~~~~-~Ivv~C~sG~R-S~~Aa~~L~~~G~~~~v~~l~GG~~  369 (370)
T PRK05600        329 PIDGD-NVVVYCASGIR-SADFIEKYSHLGHELTLHNLPGGVN  369 (370)
T ss_pred             ccCCC-cEEEECCCChh-HHHHHHHHHHcCCCCceEEeccccC
Confidence            23444 89999999987 677888899999996 999999974

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=99.22  E-value=3.7e-11  Score=108.12  Aligned_cols=118  Identities=23%  Similarity=0.327  Sum_probs=93.1

Q ss_pred             CCcccHHHHHHh-hCCCCcEEEEeccC--CCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           75 EPVVSVDWLHAN-LREPDLKVLDASWY--MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        75 ~~lIs~~eL~~~-l~~~~~vIIDvR~~--~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      ..+++-+++... ++..+..+||+|..  .....+++...+..||||||+|||+..+.+++.    .+.+++++..++..
T Consensus       155 ~il~~~edi~~n~~~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa~n~P~~~~~~~~g----~~k~~edl~~~f~~  230 (286)
T KOG1529|consen  155 SILATLEDIPFNNLATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPGAINFPFDEVLDPDG----FIKPAEDLKHLFAQ  230 (286)
T ss_pred             HHHHHHhhccccccccccceeeeccccccccccCCCCcccCcCccCCCcccCChHHhccccc----ccCCHHHHHHHHHh
Confidence            344455554443 45567999999954  223333346778889999999999999777653    34448999999999


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      .|+..++++|+-|+.|.. |+-.+..|...| .+|+++||++..|..
T Consensus       231 ~~l~~~~p~~~sC~~Gis-a~~i~~al~r~g-~~~~lYdGS~~Ew~~  275 (286)
T KOG1529|consen  231 KGLKLSKPVIVSCGTGIS-ASIIALALERSG-PDAKLYDGSWTEWAL  275 (286)
T ss_pred             cCcccCCCEEEeeccchh-HHHHHHHHHhcC-CCcceecccHHHHhh
Confidence            999999999999999985 888888999999 889999999999985

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=99.05  E-value=2.6e-10  Score=103.19  Aligned_cols=101  Identities=21%  Similarity=0.340  Sum_probs=78.5

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      ...|+|++..+++.+++++|||+|         ...||+.||-.||++.+...|..        +  ++.+++.+..   
T Consensus       112 G~yl~p~~wn~~l~D~~~vviDtR---------N~YE~~iG~F~gAv~p~~~tFre--------f--P~~v~~~~~~---  169 (308)
T COG1054         112 GTYLSPKDWNELLSDPDVVVIDTR---------NDYEVAIGHFEGAVEPDIETFRE--------F--PAWVEENLDL---  169 (308)
T ss_pred             cCccCHHHHHHHhcCCCeEEEEcC---------cceeEeeeeecCccCCChhhhhh--------h--HHHHHHHHHh---
Confidence            467999999999999999999999         46899999999999998776542        1  1233333333   


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      -++++||.||.+|++---...| |+..||++|+-|+||+-.+..
T Consensus       170 ~~~KkVvmyCTGGIRCEKas~~-m~~~GF~eVyhL~GGIl~Y~e  212 (308)
T COG1054         170 LKDKKVVMYCTGGIRCEKASAW-MKENGFKEVYHLEGGILKYLE  212 (308)
T ss_pred             ccCCcEEEEcCCceeehhhHHH-HHHhcchhhhcccchHHHHhh
Confidence            3567999999999984444445 455799999999999987765

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.93  E-value=1.2e-09  Score=100.19  Aligned_cols=99  Identities=17%  Similarity=0.210  Sum_probs=68.4

Q ss_pred             CcccHHHHHHhhCCC------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHH
Q 024280           76 PVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l  149 (269)
                      ..||++.|+.+++..      ..+|||||         -+.||..|||+||+||.-.+...                ..+
T Consensus       156 k~Is~etl~~ll~~~~~~~~~~~~iiDcR---------~pyEY~GGHIkgavnl~~~~~~~----------------~~f  210 (325)
T KOG3772|consen  156 KYISPETLKGLLQGKFSDFFDKFIIIDCR---------YPYEYEGGHIKGAVNLYSKELLQ----------------DFF  210 (325)
T ss_pred             cccCHHHHHHHHHhccccceeeEEEEEeC---------CcccccCcccccceecccHhhhh----------------hhh
Confidence            479999999988742      25699999         46899999999999998654211                111


Q ss_pred             HHc-CC---CCCCcEEEeCCCChHHHHHHHHHHHH------------cCCCcEEEccCcHHHHHhC
Q 024280          150 SAL-GL---ENKDGLVVYDGKGIFSAARVWWMFRV------------FGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       150 ~~l-GI---~~d~~VVvY~~~g~~~A~ra~~~L~~------------~G~~nV~vLdGG~~~W~~~  199 (269)
                      ... +.   .+...+|+||.-..-.+.+++..|+.            +-|..+++|+||+.+|-..
T Consensus       211 ~~~~~~~~~~~~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~  276 (325)
T KOG3772|consen  211 LLKDGVPSGSKRVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSN  276 (325)
T ss_pred             ccccccccccCceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHh
Confidence            111 11   12346799998544345666666762            4455799999999999864

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=98.89  E-value=5.5e-09  Score=102.11  Aligned_cols=72  Identities=15%  Similarity=0.191  Sum_probs=59.8

Q ss_pred             CCcEEEEeccCCCCCCCCCHhhHhhCCCCC----CeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCC
Q 024280           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPG----ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG  165 (269)
Q Consensus        90 ~~~vIIDvR~~~~~~~~~~~~ey~~gHIPG----Ai~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~  165 (269)
                      ++.+|||+|         ++++|..+||||    |+|+|+..+.                 ..+..  ++++++||+||.
T Consensus       406 ~~~~lIDVR---------~~~E~~~~hI~g~~~~a~niP~~~l~-----------------~~~~~--l~~~~~iivyC~  457 (482)
T PRK01269        406 PDDVIIDIR---------SPDEQEDKPLKLEGVEVKSLPFYKLS-----------------TQFGD--LDQSKTYLLYCD  457 (482)
T ss_pred             CCCEEEECC---------CHHHHhcCCCCCCCceEEECCHHHHH-----------------HHHhh--cCCCCeEEEECC
Confidence            457999999         689999999999    9999987642                 22222  467889999999


Q ss_pred             CChHHHHHHHHHHHHcCCCcEEEcc
Q 024280          166 KGIFSAARVWWMFRVFGHDRVWVLD  190 (269)
Q Consensus       166 ~g~~~A~ra~~~L~~~G~~nV~vLd  190 (269)
                      +|.+ |..++..|+.+||+||+++.
T Consensus       458 ~G~r-S~~aa~~L~~~G~~nv~~y~  481 (482)
T PRK01269        458 RGVM-SRLQALYLREQGFSNVKVYR  481 (482)
T ss_pred             CCHH-HHHHHHHHHHcCCccEEecC
Confidence            9986 78888999999999999875

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=98.63  E-value=3e-08  Score=91.58  Aligned_cols=103  Identities=23%  Similarity=0.291  Sum_probs=79.3

Q ss_pred             CCCcccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           74 KEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ++--||..++++++++ ...++||+|         +..+|+..|+|+|+|||+.++.....            ++..+.+
T Consensus       315 ~~~Rvsv~d~k~il~~~~~h~llDvR---------p~~~~eI~~lP~avNIPL~~l~~~~~------------~~~~~~~  373 (427)
T KOG2017|consen  315 PDERVSVTDYKRILDSGAKHLLLDVR---------PSHEYEICRLPEAVNIPLKELRSRSG------------KKLQGDL  373 (427)
T ss_pred             hhhcccHHHHHHHHhcCCCeEEEecc---------CcceEEEEecccccccchhhhhhhhh------------hhhcccc
Confidence            3556899999999987 468999999         78999999999999999988654332            1111111


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCC-cEEEccCcHHHHHhC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHD-RVWVLDGGLPRWRAS  199 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~-nV~vLdGG~~~W~~~  199 (269)
                       -+...+|+|.|+.|+. +.++.|.|+..+++ +|+.+-||+.+|.+.
T Consensus       374 -~~~~~~I~ViCrrGNd-SQ~Av~~Lre~~~~~~vrDvigGl~~w~~~  419 (427)
T KOG2017|consen  374 -NTESKDIFVICRRGND-SQRAVRILREKFPDSSVRDVIGGLKAWAAK  419 (427)
T ss_pred             -cccCCCEEEEeCCCCc-hHHHHHHHHhhCCchhhhhhhhHHHHHHHh
Confidence             1345669999999985 78888999866654 678889999999874

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=98.14  E-value=4.1e-06  Score=76.74  Aligned_cols=98  Identities=19%  Similarity=0.210  Sum_probs=71.1

Q ss_pred             CcccHHHHHHhhCCC------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHH
Q 024280           76 PVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l  149 (269)
                      .-|+++-|+.+++..      +.+|||||         -+.||..|||-+||||.-.+                ++.-.+
T Consensus       242 ~RIs~etlk~vl~g~~~~~f~kCiIIDCR---------FeYEY~GGHIinaVNi~s~~----------------~l~~~F  296 (427)
T COG5105         242 QRISVETLKQVLEGMYNIDFLKCIIIDCR---------FEYEYRGGHIINAVNISSTK----------------KLGLLF  296 (427)
T ss_pred             hhcCHHHHHHHHhchhhhhhhceeEEeec---------ceeeecCceeeeeeecchHH----------------HHHHHH
Confidence            569999999988742      37899999         46899999999999997432                333333


Q ss_pred             HHcCCCCCCcEEEeCCCChHHHHHHHHHHHHc------------CCCcEEEccCcHHHHHh
Q 024280          150 SALGLENKDGLVVYDGKGIFSAARVWWMFRVF------------GHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       150 ~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~------------G~~nV~vLdGG~~~W~~  198 (269)
                      ...-++.-.-+|+.|+-....|.+++.-|+..            =|..|+||+||+.+.-.
T Consensus       297 ~hkplThp~aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~  357 (427)
T COG5105         297 RHKPLTHPRALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYS  357 (427)
T ss_pred             HhccccCceeEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhh
Confidence            32223445667899986555688888777543            24579999999987654

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=97.58  E-value=1.1e-05  Score=74.97  Aligned_cols=43  Identities=12%  Similarity=-0.005  Sum_probs=34.8

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccc
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD  126 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~  126 (269)
                      +.++-++++|.+.+.. ...++|+|         +...|..+||||++++|..
T Consensus        12 f~~i~~~~~~~~~l~~-~~~~~d~r---------g~i~~a~egIngtis~~~~   54 (314)
T PRK00142         12 YTPIEDPEAFRDEHLA-LCKSLGLK---------GRILVAEEGINGTVSGTIE   54 (314)
T ss_pred             cccCCCHHHHHHHHHH-HHHHcCCe---------eEEEEcCCCceEEEEecHH
Confidence            3456778888887754 36789999         6889999999999999864

>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=96.50  E-value=0.0022  Score=57.87  Aligned_cols=106  Identities=20%  Similarity=0.280  Sum_probs=66.2

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccccccc-----ccCCCCCCCCCHHHHHHHHHH
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD-----RTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~-----~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      -++++||...+..++++++|||         +    ...||.+|+++-+..+..     ..-++...+|........-.+
T Consensus         5 ~~s~~wlnr~l~~~nllllDCR---------s----es~~i~~A~~valPalmlrrl~~g~l~~ra~~p~~~d~~~~~~~   71 (343)
T KOG1717|consen    5 SKSVAWLNRQLELGNLLLLDCR---------S----ESSHIESAINVALPALMLRRLTGGNLPVRALFPRSCDDKRFPAR   71 (343)
T ss_pred             HHHHHHHHhhcccCceEEEecC---------C----ccchhhhhhhhcchHHHHHHHhCCCCcceeccCCcccccccccc
Confidence            4789999999998899999999         3    567999999987765321     122233344433221111000


Q ss_pred             cCCCCCCcEEEeCCCCh-----HHHHHHH----HHHHHcCCCcEEEccCcHHHHHhC
Q 024280          152 LGLENKDGLVVYDGKGI-----FSAARVW----WMFRVFGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~-----~~A~ra~----~~L~~~G~~nV~vLdGG~~~W~~~  199 (269)
                         -+..+||+||.+..     ..++++.    .-++..|.. ++.|.||+....++
T Consensus        72 ---c~~v~vilyD~~~~e~e~~~~~~s~Lg~ll~kl~~~g~~-a~yL~ggF~~fq~e  124 (343)
T KOG1717|consen   72 ---CGTVTVILYDESSAEWEEETGAESVLGLLLKKLKDEGCS-ARYLSGGFSKFQAE  124 (343)
T ss_pred             ---CCcceeeecccccccccccchhhhHHHHHHHHHHhcCcc-hhhhhcccchhhhh
Confidence               23467999987511     1133332    344566764 89999999887764

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=91.01  E-value=1.1  Score=35.17  Aligned_cols=87  Identities=18%  Similarity=0.074  Sum_probs=39.0

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHh---hHhhCCCCCCeeccccccccccCCCCCCCCC---HHHHHHHHH
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQ---EYQVAHIPGALFFDVDGVADRTTNLPHMLPS---EEAFAAAVS  150 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~---ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~---~~~f~~~l~  150 (269)
                      -++++++.++.+.+=-.||+.|..-..+......   +-...+==.-+++|+..          .-++   .+.|.+.|.
T Consensus        14 Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~----------~~~~~~~v~~f~~~l~   83 (110)
T PF04273_consen   14 QPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDG----------GAITEEDVEAFADALE   83 (110)
T ss_dssp             S--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----T----------TT--HHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCC----------CCCCHHHHHHHHHHHH
Confidence            4789999988776556899999432111000000   01111100134555542          1122   345666666


Q ss_pred             HcCCCCCCcEEEeCCCChHHHHHHHHHHH
Q 024280          151 ALGLENKDGLVVYDGKGIFSAARVWWMFR  179 (269)
Q Consensus       151 ~lGI~~d~~VVvY~~~g~~~A~ra~~~L~  179 (269)
                      .+    ..+|++||.+|.+ +..+ |.|.
T Consensus        84 ~~----~~Pvl~hC~sG~R-a~~l-~~l~  106 (110)
T PF04273_consen   84 SL----PKPVLAHCRSGTR-ASAL-WALA  106 (110)
T ss_dssp             TT----TTSEEEE-SCSHH-HHHH-HHHH
T ss_pred             hC----CCCEEEECCCChh-HHHH-HHHH
Confidence            53    4699999999997 5544 5554

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=90.63  E-value=1.8  Score=34.98  Aligned_cols=111  Identities=18%  Similarity=0.181  Sum_probs=53.8

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhH-hhCCCCCC--eeccccccccccCCCCCC-CCCHHHHHHHHHHc
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-QVAHIPGA--LFFDVDGVADRTTNLPHM-LPSEEAFAAAVSAL  152 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey-~~gHIPGA--i~ip~~~l~~~~~~~~~~-lp~~~~f~~~l~~l  152 (269)
                      -++++++..+.+.+=-.|||-|+............. ....-+|-  +++|+..        ..+ -...+.|.+.+.. 
T Consensus        14 qlt~~d~~~L~~~GiktVIdlR~~~E~~~~p~~~~~~~~a~~~gl~y~~iPv~~--------~~~~~~~v~~f~~~~~~-   84 (135)
T TIGR01244        14 QLTKADAAQAAQLGFKTVINNRPDREEESQPDFAQIKAAAEAAGVTYHHQPVTA--------GDITPDDVETFRAAIGA-   84 (135)
T ss_pred             CCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHCCCeEEEeecCC--------CCCCHHHHHHHHHHHHh-
Confidence            377888877654443589999943211110001110 00011232  3444331        000 0123456666653 


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHH-HHHHcCCCcEEEccCcHHHHHhCCCcee
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWW-MFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~-~L~~~G~~nV~vLdGG~~~W~~~G~pv~  204 (269)
                         .+.+|++||.+|.+ ++.+|. .+...|...-.++.    .=+..|+.++
T Consensus        85 ---~~~pvL~HC~sG~R-t~~l~al~~~~~g~~~~~i~~----~~~~~G~~~~  129 (135)
T TIGR01244        85 ---AEGPVLAYCRSGTR-SSLLWGFRQAAEGVPVEEIVR----RAQAAGYDLS  129 (135)
T ss_pred             ---CCCCEEEEcCCChH-HHHHHHHHHHHcCCCHHHHHH----HHHHcCCCcc
Confidence               36899999999996 454443 33445654222222    2255666655

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]

Probab=89.52  E-value=1.3  Score=43.22  Aligned_cols=100  Identities=27%  Similarity=0.333  Sum_probs=60.8

Q ss_pred             ccHHHHHHhhC--CC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc-
Q 024280           78 VSVDWLHANLR--EP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-  152 (269)
Q Consensus        78 Is~~eL~~~l~--~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l-  152 (269)
                      |++-+|.++-+  .+  +..|+|+|         +.+.|..||+-.|.|++-.-          |+-.+++|+..+..+ 
T Consensus       309 isv~el~~~~~~~~~~VrFFiVDcR---------paeqynaGHlstaFhlDc~l----------mlqeP~~Fa~av~sLl  369 (669)
T KOG3636|consen  309 ISVIELTSHDEISSGSVRFFIVDCR---------PAEQYNAGHLSTAFHLDCVL----------MLQEPEKFAIAVNSLL  369 (669)
T ss_pred             hhHHHhhcccccccCceEEEEEecc---------chhhcccccchhhhcccHHH----------HhcCHHHHHHHHHHHH
Confidence            66666655432  22  46799999         78999999999999987543          445567777655433 


Q ss_pred             -----CCCCC-----CcEEEeCCCChH----HHHHHHHHHHHcCCCcEEEccCcHHHHH
Q 024280          153 -----GLENK-----DGLVVYDGKGIF----SAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (269)
Q Consensus       153 -----GI~~d-----~~VVvY~~~g~~----~A~ra~~~L~~~G~~nV~vLdGG~~~W~  197 (269)
                           -|..+     ..+.+. ++|.-    .-.-+..++-.-+-.-|.++.||+.+..
T Consensus       370 ~aqrqtie~~s~aggeHlcfm-GsGr~EED~YmnMviA~FlQKnk~yVS~~~GGy~~lh  427 (669)
T KOG3636|consen  370 CAQRQTIERDSNAGGEHLCFM-GSGRDEEDNYMNMVIAMFLQKNKLYVSFVQGGYKKLH  427 (669)
T ss_pred             HHHHHhhhccccCCcceEEEe-ccCcchHHHHHHHHHHHHHhcCceEEEEecchHHHHH
Confidence                 23322     344444 33221    1122223333345456889999998776

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=89.06  E-value=0.24  Score=40.26  Aligned_cols=27  Identities=26%  Similarity=0.292  Sum_probs=24.1

Q ss_pred             cccCHHHHHHHhhCCCcEEEccCCCCC
Q 024280          243 LIWTLEQVKRNIEEGTYQLVDARSKAR  269 (269)
Q Consensus       243 ~~~~~~~v~~~l~~~~~~iiDaRs~~r  269 (269)
                      ..++.+++++.++.+++++||+|.++|
T Consensus        23 ~sv~~~qvk~L~~~~~~~llDVRepeE   49 (136)
T KOG1530|consen   23 QSVSVEQVKNLLQHPDVVLLDVREPEE   49 (136)
T ss_pred             EEEEHHHHHHHhcCCCEEEEeecCHHH
Confidence            458899999999988899999999976

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=84.75  E-value=1.4  Score=36.83  Aligned_cols=31  Identities=13%  Similarity=0.255  Sum_probs=25.6

Q ss_pred             ccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          238 KFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       238 ~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                      .......++.+++++.+++++.+|||+|+++
T Consensus        31 ~~~~~~~vs~~el~~~l~~~~~~lIDVR~~~   61 (162)
T TIGR03865        31 TLKGARVLDTEAAQALLARGPVALIDVYPRP   61 (162)
T ss_pred             ccCCccccCHHHHHHHHhCCCcEEEECCCCc
Confidence            3455667999999999988889999999754

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=83.73  E-value=0.22  Score=49.61  Aligned_cols=96  Identities=20%  Similarity=0.178  Sum_probs=57.9

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      +-|+++++..+   +.+.++|.|         ...+|..+|+++++|+|+.. .+.+-  . .++-.+..+.       .
T Consensus       622 prmsAedl~~~---~~l~v~d~r---------~~~ef~r~~~s~s~nip~~~-~ea~l--~-~~~~l~~~~~-------~  678 (725)
T KOG1093|consen  622 PRISAEDLIWL---KMLYVLDTR---------QESEFQREHFSDSINIPFNN-HEADL--D-WLRFLPGIVC-------S  678 (725)
T ss_pred             ccccHHHHHHH---HHHHHHhHH---------HHHHHHHhhccccccCCccc-hHHHH--H-HhhcchHhHH-------h
Confidence            45778777766   457899999         57999999999999999872 11100  0 0100011111       2


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHH
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR  195 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~  195 (269)
                      ....+|+|....- .+++....+..+-+.++-+|.+|+++
T Consensus       679 ~~~~~v~~~~~~K-~~~e~~~~~~~mk~p~~cil~~~~~~  717 (725)
T KOG1093|consen  679 EGKKCVVVGKNDK-HAAERLTELYVMKVPRICILHDGFNN  717 (725)
T ss_pred             hCCeEEEeccchH-HHHHHhhHHHHhcccHHHHHHHHHhh
Confidence            3445666654433 34554444444457777889998873

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=81.96  E-value=5.3  Score=37.18  Aligned_cols=36  Identities=14%  Similarity=0.023  Sum_probs=30.7

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhh---CCCC
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV---AHIP  118 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~---gHIP  118 (269)
                      ..+.+...+|.+.+.+.+..|||+|         +...|..   ||||
T Consensus       134 g~tg~gKt~Ll~~L~~~~~~VvDlr---------~~a~hrGs~fG~~~  172 (311)
T TIGR03167       134 GMTGSGKTELLHALANAGAQVLDLE---------GLANHRGSSFGALG  172 (311)
T ss_pred             CCCCcCHHHHHHHHhcCCCeEEECC---------chHHhcCcccCCCC
Confidence            3577899999999988788999999         6788887   8888

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	269
3olh_A	302	Human 3-Mercaptopyruvate Sulfurtransferase Length =		1e-33
1orb_A	296	Active Site Structural Features For Chemically Modi		3e-32
1dp2_A	293	Crystal Structure Of The Complex Between Rhodanese		4e-32
1rhs_A	296	Sulfur-Substituted Rhodanese Length = 296		4e-32
1boh_A	296	Sulfur-Substituted Rhodanese (Orthorhombic Form) Le		4e-32
1rhd_A	293	Structure Of Bovine Liver Rhodanese. I. Structure D		1e-31
1urh_A	280	The "rhodanese" Fold And Catalytic Mechanism Of 3-M		9e-31
3utn_X	327	Crystal Structure Of Tum1 Protein From Saccharomyce		1e-17
3p3a_A	320	Crystal Structure Of A Putative Thiosulfate Sulfurt		8e-10
3aax_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-09
3aay_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-09
3hwi_A	298	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-09
1uar_A	285	Crystal Structure Of Rhodanese From Thermus Thermop		5e-09
3hzu_A	318	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-07
1h4k_X	271	Sulfurtransferase From Azotobacter Vinelandii In Co		3e-06
1e0c_A	271	Sulfurtransferase From Azotobacter Vinelandii Lengt		4e-06
2wlx_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		5e-06
3ipp_A	416	Crystal Structure Of Sulfur-Free Ynje Length = 416		5e-06
3ipo_A	416	Crystal Structure Of Ynje Length = 416		6e-06
2wlr_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		6e-06

>pdb|3OLH|A Chain A, Human 3-Mercaptopyruvate Sulfurtransferase Length = 302

Iteration: 1
 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 105/199 (52%), Gaps = 26/199 (13%)
Query: 77  VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct: 23  MVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 82
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct: 83  SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 142
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GGL  W      + S  S                    Q  P  F+ +  P  I T E +
Sbjct: 143 GGLRHWLRQNLPLSSGKS--------------------QPAPAEFRAQLDPAFIKTYEDI 182
Query: 251 KRNIEEGTYQLVDARSKAR 269
           K N+E   +Q+VD+R+  R
Sbjct: 183 KENLESRRFQVVDSRATGR 201

>pdb|1ORB|A Chain A, Active Site Structural Features For Chemically Modified Forms Of Rhodanese Length = 296

Iteration: 1
 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
             N+E   +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186

>pdb|1DP2|A Chain A, Crystal Structure Of The Complex Between Rhodanese And Lipoate Length = 293

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
             N+E   +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186

>pdb|1RHS|A Chain A, Sulfur-Substituted Rhodanese Length = 296

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
             N+E   +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186

>pdb|1BOH|A Chain A, Sulfur-Substituted Rhodanese (Orthorhombic Form) Length = 296

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
             N+E   +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186

>pdb|1RHD|A Chain A, Structure Of Bovine Liver Rhodanese. I. Structure Determination At 2.5 Angstroms Resolution And A Comparison Of The Conformation And Sequence Of Its Two Domains Length = 293

Iteration: 1
 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 104/199 (52%), Gaps = 27/199 (13%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVY+G   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYNGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQV 250
           GG   W   G+ V S  S                    +  P  F+      L+ T EQV
Sbjct: 128 GGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQV 167
Query: 251 KRNIEEGTYQLVDARSKAR 269
             N+E   +QLVD+R++ R
Sbjct: 168 LENLESKRFQLVDSRAQGR 186

>pdb|1URH|A Chain A, The "rhodanese" Fold And Catalytic Mechanism Of 3-Mercaptopyruvate Sulfotransferases: Crystal Structure Of Ssea From Escherichia Coli Length = 280

Iteration: 1
 Score =  130 bits (326), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 100/193 (51%), Gaps = 21/193 (10%)
Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 6   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 65
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 66  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 125
Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEE 256
           +            D +L    A E  E           F   F P  +  +  V     E
Sbjct: 126 QR-----------DDLLLEEGAVELPEG---------EFNAAFNPEAVVKVTDVLLASHE 165
Query: 257 GTYQLVDARSKAR 269
            T Q++DAR  AR
Sbjct: 166 NTAQIIDARPAAR 178

>pdb|3UTN|X Chain X, Crystal Structure Of Tum1 Protein From Saccharomyces Cerevisiae Length = 327

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 95  LDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 153
           +DA+WY+P  +  N         IP ++FFD+D ++D+ +  PHM P+++ F  A+S LG
Sbjct: 50  VDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSNLG 109
Query: 154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAIL 213
           ++  D LVVYD  G FS+ R  W   V GH +V++L+    ++R   Y ++SS       
Sbjct: 110 VQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLN-NFNQYREFKYPLDSS------- 161
Query: 214 KASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           K +A S   +  Y+      +FQ K         + VK       +   DARS  R
Sbjct: 162 KVAAFSPYPKSHYESS---ESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGR 214

>pdb|3P3A|A Chain A, Crystal Structure Of A Putative Thiosulfate Sulfurtransferase From Mycobacterium Thermoresistible Length = 320

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +V+ DWL +NL  P L ++++     DE       Y   HIPGA+   +D   D    
Sbjct: 40  ERLVTADWLASNLGRPGLVIVES-----DED---VLLYDTGHIPGAV--KIDWHTDLNDP 89
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 + E FAA +   G+   D +V+Y  K  + AA   W+F +FGH  V +LDGG  
Sbjct: 90  AVRDYINGEQFAALMDRKGVTRDDTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRD 149
Query: 195 RWRASGYDV 203
            W ++G D 
Sbjct: 150 LWVSTGRDT 158

>pdb|3AAX|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Monoclinic Form Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASG 200
              G
Sbjct: 117 ELDG 120

>pdb|3AAY|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Orthorhombic Form Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASG 200
              G
Sbjct: 117 ELDG 120

>pdb|3HWI|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From Mycobacterium Tuberculosis Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 28  LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 77
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 78  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 137
Query: 197 RASG 200
              G
Sbjct: 138 ELDG 141

>pdb|1UAR|A Chain A, Crystal Structure Of Rhodanese From Thermus Thermophilus Hb8 Length = 285

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+      DE       Y   HIPGA    +D   D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEV-----DED---ILLYDTGHIPGAQ--KIDWQRDFWDP 56
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA     LG+ N   +V+Y  K  + AA  +W F+  GH  V + +GG  
Sbjct: 57  VVRDFISEEEFAKLXERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQ 116
Query: 195 RWRASG 200
           +W   G
Sbjct: 117 KWVEEG 122

>pdb|3HZU|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Ssea (Rhodanese) From Mycobacterium Tuberculosis Length = 318

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +V+ DWL A++  P L ++++     DE       Y V HIPGA+   +D   D    
Sbjct: 39  ERLVTADWLSAHMGAPGLAIVES-----DED---VLLYDVGHIPGAV--KIDWHTDLNDP 88
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 + E FA  +   G+   D +V+Y  K  + AA   W+F +FGH  V +L+GG  
Sbjct: 89  RVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRD 148
Query: 195 RWRAS 199
            W A 
Sbjct: 149 LWLAE 153

>pdb|1H4K|X Chain X, Sulfurtransferase From Azotobacter Vinelandii In Complex With Hypophosphite Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 83  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA 198
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLA 122

>pdb|1E0C|A Chain A, Sulfurtransferase From Azotobacter Vinelandii Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 83  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA 198
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLA 122

>pdb|2WLX|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
           D KV++A+W  P       + Y ++HIPGA + D + V   +  L + + S+E   A ++
Sbjct: 147 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAMLA 196
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
             G+ +   +++Y G+ +++AARV  +    G   V +LDGG   W  +G  VE
Sbjct: 197 KHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 249

>pdb|3IPP|A Chain A, Crystal Structure Of Sulfur-Free Ynje Length = 416

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
           D KV++A+W  P       + Y ++HIPGA + D + V   +  L + + S+E   A ++
Sbjct: 148 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAMLA 197
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
             G+ +   +++Y G+ +++AARV  +    G   V +LDGG   W  +G  VE
Sbjct: 198 KHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 250

>pdb|3IPO|A Chain A, Crystal Structure Of Ynje Length = 416

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
           D KV++A+W  P       + Y ++HIPGA + D + V   +  L + + S+E   A ++
Sbjct: 148 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAMLA 197
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
             G+ +   +++Y G+ +++AARV  +    G   V +LDGG   W  +G  VE
Sbjct: 198 KHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVE 250

>pdb|2WLR|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
           D KV++A+W  P       + Y ++HIPGA + D + V   +  L + + S+E   A ++
Sbjct: 147 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAXLA 196
Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
             G+ +   +++Y G+ +++AARV  +    G   V +LDGG   W  +G  VE
Sbjct: 197 KHGIRHDTTVILY-GRDVYAAARVAQIXLYAGVKDVRLLDGGWQTWSDAGLPVE 249

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	269
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	1e-91
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	8e-90
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	1e-87
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	3e-72
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	8e-04
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	3e-71
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	3e-70
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	8e-70
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	2e-68
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	2e-62
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	2e-19
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	3e-45
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	1e-10
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	9e-10
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	5e-05
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	1e-08
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	3e-08
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	9e-08
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	6e-07
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	1e-06
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	2e-06
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	3e-06
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	3e-06
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	4e-06
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	5e-06
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	1e-05
1tq1_A	129	AT5G66040, senescence-associated family protein; C	2e-05
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	7e-05
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	2e-04
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	2e-04
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	4e-04
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	5e-04
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	6e-04

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Length = 280

 Score =  271 bits (695), Expect = 1e-91
 Identities = 70/195 (35%), Positives = 99/195 (50%), Gaps = 21/195 (10%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 4   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 63

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 64  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 123

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNI 254
            W+     +E  A                     ++    F   F P  +  +  V    
Sbjct: 124 GWQRDDLLLEEGAV--------------------ELPEGEFNAAFNPEAVVKVTDVLLAS 163

Query: 255 EEGTYQLVDARSKAR 269
            E T Q++DAR  AR
Sbjct: 164 HENTAQIIDARPAAR 178

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} Length = 302

 Score =  267 bits (685), Expect = 8e-90
 Identities = 77/200 (38%), Positives = 105/200 (52%), Gaps = 26/200 (13%)

Query: 76  PVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DR
Sbjct: 22  SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDR 81

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVL 189
           T+   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +L
Sbjct: 82  TSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLL 141

Query: 190 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQ 249
           DGGL  W      + S  S                    Q  P  F+ +  P  I T E 
Sbjct: 142 DGGLRHWLRQNLPLSSGKS--------------------QPAPAEFRAQLDPAFIKTYED 181

Query: 250 VKRNIEEGTYQLVDARSKAR 269
           +K N+E   +Q+VD+R+  R
Sbjct: 182 IKENLESRRFQVVDSRATGR 201

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Length = 296

 Score =  261 bits (670), Expect = 1e-87
 Identities = 81/200 (40%), Positives = 104/200 (52%), Gaps = 27/200 (13%)

Query: 76  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 189
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 190 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQ 249
           +GG   W   G+ V S  S                    +  P  F+      L+ T EQ
Sbjct: 127 NGGFRNWLKEGHPVTSEPS--------------------RPEPAIFKATLNRSLLKTYEQ 166

Query: 250 VKRNIEEGTYQLVDARSKAR 269
           V  N+E   +QLVD+R++ R
Sbjct: 167 VLENLESKRFQLVDSRAQGR 186

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Length = 271

 Score =  221 bits (566), Expect = 3e-72
 Identities = 43/206 (20%), Positives = 63/206 (30%), Gaps = 34/206 (16%)

Query: 64  ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFF 123
            D+++L       V+    L A L  P+L ++D +             Y   HIPGA F 
Sbjct: 2   DDFASL-----PLVIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFV 47

Query: 124 DVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH 183
           D           P + P  E   +    LG   +   VVYD +G   A R  W+  V G 
Sbjct: 48  DPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107

Query: 184 DRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHL 243
            R   L+GGL  W A    +                                        
Sbjct: 108 QRYHYLNGGLTAWLAEDRPLSRELP--------------------APAGGPVALSLHDEP 147

Query: 244 IWTLEQVKRNIEEGTYQLVDARSKAR 269
             + + +   +      + DARS   
Sbjct: 148 TASRDYLLGRLGAADLAIWDARSPQE 173

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Length = 271

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 29/131 (22%), Positives = 44/131 (33%), Gaps = 34/131 (25%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-------QVA-HIPGAL----- 121
           EP  S D+L   L   DL + DA        R+P QEY           HIPGA+     
Sbjct: 146 EPTASRDYLLGRLGAADLAIWDA--------RSP-QEYRGEKVLAAKGGHIPGAVNFEWT 196

Query: 122 -FFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV 180
              D             +    +  A  +  LG+     +V +       +   + + + 
Sbjct: 197 AAMDPSR---------ALRIRTD-IAGRLEELGITPDKEIVTHCQTHH-RSGLTYLIAKA 245

Query: 181 FGHDRVWVLDG 191
            G+ RV    G
Sbjct: 246 LGYPRVKGYAG 256

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Length = 285

 Score =  219 bits (560), Expect = 3e-71
 Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 34/199 (17%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQ--RDFWDP 56

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 57  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 116

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLI----WTLEQV 250
           +W   G  + +                          P  ++  ++   I      + + 
Sbjct: 117 KWVEEGRPLTTEVP--------------------SYPPGRYEVPYRDESIRAYRDDVLEH 156

Query: 251 KRNIEEGTYQLVDARSKAR 269
              ++EG   LVD RS   
Sbjct: 157 IIKVKEGKGALVDVRSPQE 175

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Length = 277

 Score =  216 bits (553), Expect = 3e-70
 Identities = 43/196 (21%), Positives = 75/196 (38%), Gaps = 33/196 (16%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           + +VS DW  +NL  P +  ++               Y   HI GA+  D     D    
Sbjct: 5   DVLVSADWAESNLHAPKVVFVEVDEDTS--------AYDRDHIAGAIKLDWR--TDLQDP 54

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +       + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  
Sbjct: 55  VKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRK 114

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLI-WTLEQVKRN 253
           +W   G  + S                           T++      + I    ++V   
Sbjct: 115 KWELDGRPLSSDPV--------------------SRPVTSYTASPPDNTIRAFRDEVLAA 154

Query: 254 IEEGTYQLVDARSKAR 269
           I      L+D RS   
Sbjct: 155 I--NVKNLIDVRSPDE 168

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Length = 373

 Score =  218 bits (558), Expect = 8e-70
 Identities = 42/219 (19%), Positives = 76/219 (34%), Gaps = 38/219 (17%)

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
           MS+ AA  +              +    +  +L   + +++D  + +   + +   +Y  
Sbjct: 1   MSAPAAAPKHPGKVF--------LDPSEVADHL--AEYRIVDCRYSLKI-KDHGSIQYAK 49

Query: 115 AHIPGALFFDVDGVADR---TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFS 170
            H+  A+  DVD    +   T+   H LP    F     A G+  +  ++ YD + G   
Sbjct: 50  EHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANGMAGELPVLCYDDECGAMG 109

Query: 171 AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV 230
             R+WWM    G D  +V++GG    +A+G ++ES                      G+ 
Sbjct: 110 GCRLWWMLNSLGAD-AYVINGGFQACKAAGLEMES----------------------GEP 146

Query: 231 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
                     P           +       + DARS  R
Sbjct: 147 SSLPRPATHWPFKTAFQHHYLVDEIPPQAIITDARSADR 185

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A Length = 318

 Score =  213 bits (544), Expect = 2e-68
 Identities = 47/231 (20%), Positives = 76/231 (32%), Gaps = 30/231 (12%)

Query: 39  HTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDAS 98
           H H     +         S+        +  + +  E +V+ DWL A++  P L ++++ 
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESD 62

Query: 99  WYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD 158
                        Y V HIPGA+  D     D          + E FA  +   G+   D
Sbjct: 63  E--------DVLLYDVGHIPGAVKIDWH--TDLNDPRVRDYINGEQFAELMDRKGIARDD 112

Query: 159 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA 218
            +V+Y  K  + AA   W+F +FGH  V +L+GG   W A   +                
Sbjct: 113 TVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP---------- 162

Query: 219 SEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
                         T +    +        +       G   L+D RS   
Sbjct: 163 ----------TKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEE 203

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score =  201 bits (513), Expect = 2e-62
 Identities = 49/222 (22%), Positives = 80/222 (36%), Gaps = 35/222 (15%)

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREP--------DLKVLDASWYMPDEQRN 107
           S L+           +   E +V   WLH   +          D KV++A+W  P     
Sbjct: 104 SILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAP----- 158

Query: 108 PFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG 167
             + Y ++HIPGA + D + V            S+E   A ++  G+ +   +++Y    
Sbjct: 159 --KLYLISHIPGADYIDTNEVES---EPLWNKVSDEQLKAMLAKHGIRHDTTVILYGR-D 212

Query: 168 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ 227
           +++AARV  +    G   V +LDGG   W  +G  VE                       
Sbjct: 213 VYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVK--------------- 257

Query: 228 GQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
                   +   QP L+  +EQ +  +      LV  RS   
Sbjct: 258 -AEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPE 298

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score = 86.3 bits (214), Expect = 2e-19
 Identities = 16/127 (12%), Positives = 30/127 (23%), Gaps = 25/127 (19%)

Query: 78  VSVDWLHANLREPDLKVLDA-------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
           ++       L++ + K +D         W       +        H   AL         
Sbjct: 6   LAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPS-------GHELAALNLSAS---- 54

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
                     S E   A +    L+    + +Y          V    +  G   + +L 
Sbjct: 55  -----WLDKMSTEQLNAWIKQHNLKTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILS 107

Query: 191 GGLPRWR 197
             L    
Sbjct: 108 DALSEPS 114

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A Length = 230

 Score =  150 bits (382), Expect = 3e-45
 Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 42/179 (23%)

Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
           D  ++D           P   Y+  H+PGA   D+     R      +   E        
Sbjct: 6   DAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQ 56

Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
            LGL     +V+YD        R  +   + G + V +   G   +     +        
Sbjct: 57  TLGLR--SPVVLYDEGLTSRLCRTAFFLGLGGLE-VQLWTEGWEPYATEKEEP------- 106

Query: 211 AILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
                             +   T    K +   + T ++  R+       L+D RS   
Sbjct: 107 ------------------KPERTEVVAKLRRDWLLTADEAARHP-----LLLDVRSPEE 142

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 60.1 bits (145), Expect = 1e-10
 Identities = 27/127 (21%), Positives = 38/127 (29%), Gaps = 28/127 (22%)

Query: 76  PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
            V +   + A L    +L +LD         R     +  AH   A             N
Sbjct: 7   AVRTFHDIRAALLARRELALLDV--------REE-DPFAQAHPLFAA------------N 45

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LP            + A        + VYD     +           G+  V +LDGGL 
Sbjct: 46  LPL-----SRLELEIHARVPRRDTPITVYDDGEGLAP-VAAQRLHDLGYSDVALLDGGLS 99

Query: 195 RWRASGY 201
            WR +G 
Sbjct: 100 GWRNAGG 106

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 57.8 bits (139), Expect = 9e-10
 Identities = 27/136 (19%), Positives = 35/136 (25%), Gaps = 29/136 (21%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             +    L   L EP  +VLD               Y   HIPGA +     +      L
Sbjct: 377 DTIDPTTLADWLGEPGTRVLDF--------TAS-ANYAKRHIPGAAWVLRSQLKQALERL 427

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                                     V        A       +      V++LDGG   
Sbjct: 428 G--------------------TAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSA 467

Query: 196 WRASGYDVESSASGDA 211
           W A+G   E   S  A
Sbjct: 468 WVAAGLPTEDGESLLA 483

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 43.2 bits (101), Expect = 5e-05
 Identities = 30/197 (15%), Positives = 57/197 (28%), Gaps = 38/197 (19%)

Query: 75  EPVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
            P ++ + + A L    +  +LDA           F EYQ   IPG +      +  R  
Sbjct: 129 TPSLAAEEVQALLDARAEAVILDA---------RRFDEYQTMSIPGGISVPGAELVLRVA 179

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
            L                    +    ++V       S      +      + V  L  G
Sbjct: 180 ELA------------------PDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNG 221

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKR 252
              W  +G  +E   +      +    +A  +  +          +     +  L  + +
Sbjct: 222 TIGWTLAGQQLEHGQTRRFGAISQDTRKAAAQRAR------AVADRAGVERL-DLAGLAQ 274

Query: 253 NIEEG--TYQLVDARSK 267
             +E   T  L+D R+ 
Sbjct: 275 WQDEHDRTTYLLDVRTP 291

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152

 Score = 52.3 bits (125), Expect = 1e-08
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 32/146 (21%)

Query: 67  STLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD 126
           S ++++     ++   L    R P++ ++D         R+  +     HI G+L +   
Sbjct: 19  SHMAMARSISYITSTQLLPLHRRPNIAIIDV--------RDE-ERNYDGHIAGSLHYASG 69

Query: 127 GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVY-DGKGIFSAARVWWMFRV----- 180
              D+ ++L   +                +KD LV +     +        +        
Sbjct: 70  SFDDKISHLVQNVK---------------DKDTLVFHSALSQVRGPTCARRLVNYLDEKK 114

Query: 181 --FGHDRVWVLDGGLPRWRASGYDVE 204
              G   + +L+ G   W ASG  V 
Sbjct: 115 EDTGIKNIMILERGFNGWEASGKPVC 140

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141

 Score = 50.9 bits (122), Expect = 3e-08
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 30/143 (20%)

Query: 77  VVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           +     L + L   EP   +LD         R+    Y   HI GA+   ++ + DR ++
Sbjct: 1   MSDAHVLKSRLEWGEPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASS 51

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
               L               +++D + VY      ++  V  + R  G + V  L GGL 
Sbjct: 52  S---LE--------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLA 92

Query: 195 RWRASGYDVESSASGDAILKASA 217
            W+A G   E          A  
Sbjct: 93  AWKAIGGPTEGIIESRTPAGADD 115

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 31/138 (22%)

Query: 88  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 147
               + V+D         R+  + Y+  HIP A+            ++P      +    
Sbjct: 30  GYEGIIVVDV--------RDA-EAYKECHIPTAI------------SIPG----NKINED 64

Query: 148 AVSALGLENKDG-LVVY-DGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 205
               L   +K+  ++ Y  G     A +    F   G   V  L GG+  WR    +VE 
Sbjct: 65  TTKRL---SKEKVIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEG 120

Query: 206 SASGDAILKASAASEAIE 223
           +    A L  +   E++E
Sbjct: 121 TLGAKADLFWNMKKESLE 138

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 46.7 bits (111), Expect = 6e-07
 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
              S + +   +   +P++ ++D         R P  EY + HIP ++        D   
Sbjct: 23  QSYSFEDMKRIVGKHDPNVVLVDV--------REP-SEYSIVHIPASINVPYRSHPDA-- 71

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL 193
                      F   +     ++   L+ Y   G         +    G+    +  G +
Sbjct: 72  ----FALDPLEFEKQIGIPKPDSAKELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSM 126

Query: 194 PRWRASGYDV 203
             W + G D 
Sbjct: 127 NDWVSHGGDK 136

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Length = 124

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 23/118 (19%), Positives = 35/118 (29%), Gaps = 29/118 (24%)

Query: 88  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 147
                 VLD         RN   + +   I GA+      +A R   L    P++     
Sbjct: 29  ATGKYVVLDV--------RNAPAQVKKDQIKGAIAMPAKDLATRIGELD---PAKT---- 73

Query: 148 AVSALGLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
                        VVYD  G  +       +    G +  + L G L  W+     +E
Sbjct: 74  ------------YVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLE 118

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 30/125 (24%)

Query: 82  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 141
            L     EP   +LD         R+    Y   HI GA+   ++ + DR ++    L  
Sbjct: 6   RLEWG--EPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASSS---LE- 50

Query: 142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY 201
                        +++D + VY      ++  V  + R  G + V  L GGL  W+A G 
Sbjct: 51  -------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLAAWKAIGG 95

Query: 202 DVESS 206
             E  
Sbjct: 96  PTELE 100

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1 Length = 154

 Score = 45.5 bits (107), Expect = 3e-06
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 27/140 (19%)

Query: 75  EPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
               +V WL+  L   + ++L  D         R P + Y+ +HI  A+   + G+  R 
Sbjct: 15  AISKTVAWLNEQLELGNERLLLMDC--------R-PQELYESSHIESAINVAIPGIMLRR 65

Query: 133 TN-----LPHMLPSEEAFAAAVSALGLENKDGLVVYD------GKGIFSAARVWWMFRVF 181
                  +  +    E         G    D +V+YD       +     + +  + +  
Sbjct: 66  LQKGNLPVRALFTRGEDRDRFTRRCG---TDTVVLYDESSSDWNENTGGESLLGLLLKKL 122

Query: 182 GHD--RVWVLDGGLPRWRAS 199
             +  R + L+GG  +++A 
Sbjct: 123 KDEGCRAFYLEGGFSKFQAE 142

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} Length = 152

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 28/130 (21%)

Query: 80  VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHML 139
           V+ L          V+D              +     I  ++            N+P + 
Sbjct: 13  VELLDNPDSLVKAAVIDCRDS----------DRDCGFIVNSI------------NMPTIS 50

Query: 140 PSEEAFAAAVSALGLENKDGLVVYDGK----GIFSAARVWWMFRVFGHD--RVWVLDGGL 193
            +EE +      L  E K+  V +  +        A R     +  G+    V+VL GG 
Sbjct: 51  CTEEMYEKLAKTLFEEKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGW 110

Query: 194 PRWRASGYDV 203
             +     DV
Sbjct: 111 EAFYHMYGDV 120

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 32/149 (21%), Positives = 49/149 (32%), Gaps = 31/149 (20%)

Query: 58  LAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHI 117
                  D +          VS D +   L +  L +LD         RN   E+   H+
Sbjct: 356 WTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDV--------RNV-DEWAGGHL 406

Query: 118 PGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWW 176
           P A    +  +A    ++P                    +DG + VY   G   +A    
Sbjct: 407 PQAHHIPLSKLAAHIHDVP--------------------RDGSVCVYCRTG-GRSAIAAS 445

Query: 177 MFRVFGHDRVWVLDGGLPRWRASGYDVES 205
           + R  G   V  + GG   WR  G+ VE+
Sbjct: 446 LLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 32/133 (24%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 137
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDND- 56

Query: 138 MLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                               D  ++V    G  S           G+D V+ +DGG   W
Sbjct: 57  -------------------FDTPVMVMCYHGNSS-KGAAQYLLQQGYDVVYSIDGGFEAW 96

Query: 197 RASGYDVESSASG 209
           +   +  E +   
Sbjct: 97  QR-QFPAEVAYGA 108

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* Length = 169

 Score = 43.6 bits (102), Expect = 1e-05
 Identities = 22/167 (13%), Positives = 44/167 (26%), Gaps = 23/167 (13%)

Query: 40  THTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASW 99
           +H     SS +       + +    +     + P E    +   H        +V+D   
Sbjct: 4   SHHHHHHSSGRENLYFQGMDSYSITNVK--YLDPTELHRWMQEGHTTTLREPFQVVDVRG 61

Query: 100 YMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG 159
                      +Y   HI     +    +      L  +                     
Sbjct: 62  S----------DYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLE-----KQADGRGALN 106

Query: 160 LVVY----DGKGIFSAARVWWMFRV--FGHDRVWVLDGGLPRWRASG 200
           ++ +      +G  +A  +            R+WVL GG  RW++  
Sbjct: 107 VIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVY 153

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             VSV   H  L     + LD         R P +E+   H  GA+              
Sbjct: 18  SSVSVTVAHDLLLA-GHRYLDV--------RTP-EEFSQGHACGAINVPYMNRG------ 61

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
              +     F   VS+   ++ + ++V    G  S      +    G   V  + GG   
Sbjct: 62  ASGMSKNTDFLEQVSSHFGQSDN-IIVGCQSGGRSIKATTDLLHA-GFTGVKDIVGGYSA 119

Query: 196 WRASGYDVES 205
           W  +G   ++
Sbjct: 120 WAKNGLPTKA 129

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A Length = 153

 Score = 41.0 bits (95), Expect = 7e-05
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 18/133 (13%)

Query: 76  PVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
             +  + L A L     KVL  D+        R PF EY  +HI  A+  +   +  R  
Sbjct: 4   TQIVTERLVALLESGTEKVLLIDS--------R-PFVEYNTSHILEAININCSKLMKRRL 54

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF-------GHDRV 186
               +L +E    +A   + ++    +VVYD      A+     F            + V
Sbjct: 55  QQDKVLITELIQHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSV 114

Query: 187 WVLDGGLPRWRAS 199
            +L GG   +   
Sbjct: 115 HLLAGGFAEFSRC 127

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 22/106 (20%)

Query: 106 RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYD 164
           R    EY+  H+P A    V+        L                   ++KD  ++++ 
Sbjct: 23  REL-DEYEELHLPNATLISVNDQEKLADFLS------------------QHKDKKVLLHC 63

Query: 165 GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
             G  +      M    G+     L+G +  +   G+ +    + D
Sbjct: 64  RAGRRALDAAKSM-HELGYTPY-YLEGNVYDFEKYGFRMVYDDTCD 107

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 29/151 (19%)

Query: 65  DYSTLSVSPKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALF 122
            +S+  V      ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L 
Sbjct: 9   HHSSGLVPRGSGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSLS 59

Query: 123 FDVDGVADRTTN--LPHMLPSEEAFAAAVSALGLENKDGLVVYD----GKGIFSAARVWW 176
              + ++   T   +   LP +       +     N + +V+ D     K +     +  
Sbjct: 60  VPEEAISPGVTASWIEAHLPDDS----KDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRS 115

Query: 177 MFRVFGHD--------RVWVLDGGLPRWRAS 199
           +                  VL+GG   W   
Sbjct: 116 LKDALFKWESKTVLRNEPLVLEGGYENWLLC 146

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens} Length = 158

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 108 PFQEYQVAHIPGALFFDVDG--VADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG 165
           PF EY  +HI GA+  +        R       +    +      +        ++VYD 
Sbjct: 42  PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKEIIVYDE 101

Query: 166 -----KGIFSAARVWWMFRVFGHD--RVWVLDGGLPRWRAS 199
                  +  +  +  +      +     VL GGL  ++ +
Sbjct: 102 NTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQN 142

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 25/141 (17%)

Query: 73  PKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
            ++  ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L   V   A 
Sbjct: 12  KEKGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSL--SVPEEAI 60

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------------IFSAARVWWMF 178
                   + +     +  +     N + +V+ D                   A   W  
Sbjct: 61  SPGVTASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWES 120

Query: 179 RVFGHDRVWVLDGGLPRWRAS 199
           +    +   VL+GG   W   
Sbjct: 121 KTVLRNEPLVLEGGYENWLLC 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	269
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	100.0
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	100.0
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	100.0
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	100.0
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	100.0
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	99.97
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	99.96
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	99.96
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	99.96
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	99.93
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	99.92
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.91
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	99.91
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.9
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.9
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	99.89
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.89
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.89
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.89
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.89
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.88
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.88
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.88
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.88
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.88
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	99.87
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.87
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	99.86
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	99.86
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.85
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	99.85
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.84
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.84
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	99.84
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.83
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	99.83
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	99.83
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.83
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.83
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	99.82
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	99.81
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.81
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.8
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.8
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	99.8
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.79
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.77
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.77
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.76
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.76
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.75
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.75
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	99.75
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.74
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	99.73
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.71
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	99.7
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	99.7
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	99.69
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.69
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.61
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.56
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.55
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.52
2f46_A	156	Hypothetical protein; structural genomics, joint c	97.12
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	82.45
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	81.4

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-37  Score=286.16  Aligned_cols=177  Identities=29%  Similarity=0.555  Sum_probs=152.3

Q ss_pred             cccHHHHHHhhCC---CCcEEEEeccCCCCCCCCCHhhH-hhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           77 VVSVDWLHANLRE---PDLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        77 lIs~~eL~~~l~~---~~~vIIDvR~~~~~~~~~~~~ey-~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ||||+||.++++.   .++++||++|+||+..+++..|| ++||||||++++++.+.+...++++|||+.+.|++.|+++
T Consensus        29 LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~~l  108 (327)
T 3utn_X           29 LISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSNL  108 (327)
T ss_dssp             EECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHHHT
T ss_pred             ccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHHHc
Confidence            8999999999853   35899999999999887778888 6799999999999999999999999999999999999999


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCC-CC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ-VG  231 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~-~~  231 (269)
                      ||+++++|||||+.+..+|+|+||+|+++||++|++|||| .+|+++|+|++++....               ..+. ..
T Consensus       109 GI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~~~~---------------~~p~p~~  172 (327)
T 3utn_X          109 GVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSKVAA---------------FSPYPKS  172 (327)
T ss_dssp             TCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCCCSC---------------SCSSCCC
T ss_pred             CCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCCccC---------------cCCcCCc
Confidence            9999999999999988889999999999999999999987 89999999999875421               0001 12


Q ss_pred             CcccccccCCccccCHHHHHHHhhCC----CcEEEccCCCCC
Q 024280          232 PTTFQTKFQPHLIWTLEQVKRNIEEG----TYQLVDARSKAR  269 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~v~~~l~~~----~~~iiDaRs~~r  269 (269)
                      ...+...++++.+++.++|++.++++    +++|||+|+++|
T Consensus       173 ~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~r  214 (327)
T 3utn_X          173 HYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGR  214 (327)
T ss_dssp             CCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHH
T ss_pred             ccccccccCchheecHHHHhhhhhcccccccceeeccCccce
Confidence            23455567788899999999998763    478999998754

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=100.00  E-value=5.2e-35  Score=266.75  Aligned_cols=176  Identities=43%  Similarity=0.836  Sum_probs=154.5

Q ss_pred             CCCCcccHHHHHHhhCCC----CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH
Q 024280           73 PKEPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (269)
Q Consensus        73 ~~~~lIs~~eL~~~l~~~----~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~  148 (269)
                      ...++|+++||+++++++    +++||||||+++...+++..+|..||||||+|||++.+.+...++++++|+.+.|+++
T Consensus        19 ~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~   98 (302)
T 3olh_A           19 YFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEY   98 (302)
T ss_dssp             -CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred             CCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence            346799999999999765    7999999999887655557899999999999999999888888899999999999999


Q ss_pred             HHHcCCCCCCcEEEeCCC--ChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhh
Q 024280          149 VSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY  226 (269)
Q Consensus       149 l~~lGI~~d~~VVvY~~~--g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~  226 (269)
                      ++++|++++++|||||++  +..+|+|+||+|+.+||++|++|+||+.+|+.+|+|++++.+                  
T Consensus        99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~------------------  160 (302)
T 3olh_A           99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKS------------------  160 (302)
T ss_dssp             HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSCC------------------
T ss_pred             HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCCC------------------
Confidence            999999999999999964  555699999999999999999999999999999999998754                  


Q ss_pred             cCCCCCcccccccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          227 QGQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                        ++.+.+|...++++.+++.+++++.+++++.+|||+|+++
T Consensus       161 --~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~  200 (302)
T 3olh_A          161 --QPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATG  200 (302)
T ss_dssp             --CCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHH
T ss_pred             --CcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHH
Confidence              1445678888899999999999999987889999999864

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=100.00  E-value=1.4e-33  Score=253.37  Aligned_cols=174  Identities=39%  Similarity=0.753  Sum_probs=153.9

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCC-CCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~-~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..+|+++||++++++++++|||||++.+... +++..+|..||||||+|+|+..+.+...++++++|+.+.|++.++.+|
T Consensus         3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g   82 (280)
T 1urh_A            3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   82 (280)
T ss_dssp             CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            4689999999999877899999997765432 124689999999999999999888777778899999999999999999


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCc
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPT  233 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  233 (269)
                      ++++++|||||++|.++|.+++|+|+.+||+||++|+||+.+|..+|+|++++.+.                    +.+.
T Consensus        83 i~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~--------------------~~~~  142 (280)
T 1urh_A           83 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVE--------------------LPEG  142 (280)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCCC--------------------CCCC
T ss_pred             CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCCC--------------------CCCC
Confidence            99999999999998876899999999999999999999999999999999987641                    3456


Q ss_pred             ccccccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          234 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                      +|...+++...++.+++++.+++++++|||+|+++
T Consensus       143 ~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~  177 (280)
T 1urh_A          143 EFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAA  177 (280)
T ss_dssp             CCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHH
T ss_pred             ccccccCcccEEcHHHHHHHhcCCCcEEEeCCchh
Confidence            78888899999999999999987789999999864

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=100.00  E-value=3.6e-33  Score=253.16  Aligned_cols=174  Identities=46%  Similarity=0.835  Sum_probs=153.2

Q ss_pred             CCCcccHHHHHHhhCC----CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHH
Q 024280           74 KEPVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~----~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l  149 (269)
                      +..+|+++||++++++    ++++|||||++++. ..++..+|..||||||+|||+..+.+...+..+++|+.+.|++.+
T Consensus         6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~-~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l   84 (296)
T 1rhs_A            6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYV   84 (296)
T ss_dssp             CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTT-SCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHH
T ss_pred             cCceeeHHHHHHHHhccccCCCeEEEEecccCcC-CcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHH
Confidence            4678999999999876    57999999987765 222368999999999999999988776666788999999999999


Q ss_pred             HHcCCCCCCcEEEeCCC--ChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhc
Q 024280          150 SALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ  227 (269)
Q Consensus       150 ~~lGI~~d~~VVvY~~~--g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~  227 (269)
                      +.+|++++++|||||+.  |.+++++++|+|+.+||++|++|+||+.+|+.+|+|++++.+.                  
T Consensus        85 ~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~------------------  146 (296)
T 1rhs_A           85 GSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSR------------------  146 (296)
T ss_dssp             HHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCCC------------------
T ss_pred             HHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCCCC------------------
Confidence            99999999999999998  8777899999999999999999999999999999999987541                  


Q ss_pred             CCCCCcccccccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          228 GQVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                        +.+.+|..++++...++.+++++.+++++.+|||+|+++
T Consensus       147 --~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~  185 (296)
T 1rhs_A          147 --PEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQG  185 (296)
T ss_dssp             --CCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHH
T ss_pred             --CCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchh
Confidence              345678888888899999999999887789999999865

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=100.00  E-value=3.1e-32  Score=243.40  Aligned_cols=165  Identities=25%  Similarity=0.374  Sum_probs=149.2

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      ..+|+++||++++++++++|||||         +..+|..||||||+|+|+..+.....+.++++|+.+.|+++++++|+
T Consensus         8 ~~~is~~~l~~~l~~~~~~iiDvR---------~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi   78 (271)
T 1e0c_A            8 PLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGH   78 (271)
T ss_dssp             CSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC
T ss_pred             CceeeHHHHHHhccCCCeEEEEcC---------CcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            468999999999977789999999         68999999999999999999887767788999999999999999999


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCcc
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTT  234 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  234 (269)
                      +++++|||||+.|...+.+++|+|+.+||++|++|+||+.+|+.+|+|++++.+.                    +.+.+
T Consensus        79 ~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~~--------------------~~~~~  138 (271)
T 1e0c_A           79 RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPA--------------------PAGGP  138 (271)
T ss_dssp             CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCCC--------------------CCCSC
T ss_pred             CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCCC--------------------CCCCC
Confidence            9999999999998856899999999999999999999999999999999987641                    34567


Q ss_pred             cccccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          235 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       235 ~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                      |....+....++.+++++.+++++.+|||+|+++
T Consensus       139 ~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~  172 (271)
T 1e0c_A          139 VALSLHDEPTASRDYLLGRLGAADLAIWDARSPQ  172 (271)
T ss_dssp             CCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHH
T ss_pred             ccccCCccccccHHHHHHHhcCCCcEEEEcCChh
Confidence            7777788888999999999988889999999864

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=99.97  E-value=1.5e-31  Score=245.55  Aligned_cols=172  Identities=26%  Similarity=0.421  Sum_probs=144.6

Q ss_pred             CCcccCCCCCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccc-cccccCCCCCCCCCH
Q 024280           64 ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADRTTNLPHMLPSE  142 (269)
Q Consensus        64 ~~~~~~~~~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~-l~~~~~~~~~~lp~~  142 (269)
                      ++-.+.+..++..+|+++||++++++++++|||||        ++.++|..||||||+|||+.. +.+   ...+++|+.
T Consensus        28 ~~~~~~~~~~~~~~is~~~l~~~l~~~~~~iiDvR--------~~~e~y~~gHIpGAi~ip~~~~~~~---~~~~~~~~~   96 (318)
T 3hzu_A           28 PSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESD--------EDVLLYDVGHIPGAVKIDWHTDLND---PRVRDYING   96 (318)
T ss_dssp             CCTTTTTSSSGGGEECHHHHHHHTTCTTEEEEECC--------SSTTSGGGCBCTTEEECCHHHHHBC---SSSSSBCCH
T ss_pred             cchhhhhcCCCCceecHHHHHHhccCCCEEEEECC--------CChhHHhcCcCCCCeEeCchhhhcc---CcccCCCCH
Confidence            33344556667789999999999988889999999        222349999999999999864 332   235789999


Q ss_pred             HHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHH
Q 024280          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAI  222 (269)
Q Consensus       143 ~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~  222 (269)
                      +.|+++++++|++++++|||||+.|...|++++|+|+.+||+||++|+||+.+|+++|+|++++.+.             
T Consensus        97 ~~~~~~l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~-------------  163 (318)
T 3hzu_A           97 EQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPT-------------  163 (318)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCCC-------------
T ss_pred             HHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCCC-------------
Confidence            9999999999999999999999988866999999999999999999999999999999999987541             


Q ss_pred             HHhhcCCCCCccccc--ccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          223 EKVYQGQVGPTTFQT--KFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       223 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                             +.+..|..  ..++.++++.+++++.+++.  +|||+|+++
T Consensus       164 -------~~~~~~~~~~~~~~~~~i~~~el~~~l~~~--~liDvR~~~  202 (318)
T 3hzu_A          164 -------KTCTGYPVVQRNDAPIRAFRDDVLAILGAQ--PLIDVRSPE  202 (318)
T ss_dssp             -------CCCCCCCCCCCCCTTTBCCHHHHHHHTTTS--CEEECSCHH
T ss_pred             -------CCCCccccccCCCccccccHHHHHHhhcCC--eEEecCCHH
Confidence                   34456665  35788899999999998764  899999865

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=99.96  E-value=6.5e-30  Score=228.95  Aligned_cols=161  Identities=25%  Similarity=0.492  Sum_probs=136.5

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCC-HhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNP-FQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~-~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..+|+++||.+++++++++|||||         . ..+|..||||||+|||+..+..  .+..+++++.+.|++.++.+|
T Consensus         5 ~~~is~~~l~~~l~~~~~~liDvR---------~~~~ey~~ghIpgA~~ip~~~~~~--~~~~~~~~~~~~~~~~~~~~g   73 (277)
T 3aay_A            5 DVLVSADWAESNLHAPKVVFVEVD---------EDTSAYDRDHIAGAIKLDWRTDLQ--DPVKRDFVDAQQFSKLLSERG   73 (277)
T ss_dssp             HHEECHHHHHTTTTCTTEEEEEEE---------SSSHHHHHCBSTTCEEEETTTTTB--CSSSSSBCCHHHHHHHHHHHT
T ss_pred             CceEcHHHHHHHhCCCCEEEEEcC---------CChhhHhhCCCCCcEEeccccccc--CCCCCCCCCHHHHHHHHHHcC
Confidence            468999999999987789999999         4 6899999999999999886432  223578999999999999999


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCc
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPT  233 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  233 (269)
                      ++++++|||||..|.+.+.+++|+|+.+||+||++|+||+.+|+.+|+|+++..+.                    +.+.
T Consensus        74 i~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~--------------------~~~~  133 (277)
T 3aay_A           74 IANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVS--------------------RPVT  133 (277)
T ss_dssp             CCTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCCC--------------------CCCC
T ss_pred             CCCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCCC--------------------cCCC
Confidence            99999999999988767999999999999999999999999999999999987641                    2334


Q ss_pred             cccc-ccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          234 TFQT-KFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       234 ~~~~-~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                      .|.. ..+..+.++.+++++.+++++  |||+|+++
T Consensus       134 ~~~~~~~~~~~~~~~~el~~~~~~~~--liDvR~~~  167 (277)
T 3aay_A          134 SYTASPPDNTIRAFRDEVLAAINVKN--LIDVRSPD  167 (277)
T ss_dssp             CCCCCCCCGGGEECHHHHHHTTTTSE--EEECSCHH
T ss_pred             CccccCcccchhcCHHHHHHhcCCCC--EEEeCChH
Confidence            5544 345667789999999987655  99999864

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=99.96  E-value=8.3e-30  Score=229.16  Aligned_cols=166  Identities=30%  Similarity=0.513  Sum_probs=140.3

Q ss_pred             CCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccc-cccccCCCCCCCCCHHHHHHHHH
Q 024280           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADRTTNLPHMLPSEEAFAAAVS  150 (269)
Q Consensus        72 ~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~-l~~~~~~~~~~lp~~~~f~~~l~  150 (269)
                      .++..+|+++||++++++++++|||||        ....+|..||||||+|+|+.. +.+   +..+++|+.+.|.++++
T Consensus         4 ~~~~~~is~~~l~~~l~~~~~~liDvR--------~~~~e~~~ghIpgA~~ip~~~~~~~---~~~~~~~~~~~~~~~~~   72 (285)
T 1uar_A            4 AHPEVLVSTDWVQEHLEDPKVRVLEVD--------EDILLYDTGHIPGAQKIDWQRDFWD---PVVRDFISEEEFAKLME   72 (285)
T ss_dssp             SCGGGEECHHHHHTTTTCTTEEEEEEC--------SSTTHHHHCBCTTCEEECHHHHHBC---SSSSSBCCHHHHHHHHH
T ss_pred             CCCCceEcHHHHHHhcCCCCEEEEEcC--------CCcchhhcCcCCCCEECCchhhccC---CcccCCCCHHHHHHHHH
Confidence            445679999999999987789999999        125899999999999999885 332   23678999999999999


Q ss_pred             HcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCC
Q 024280          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (269)
Q Consensus       151 ~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~  230 (269)
                      .+|++++++|||||+.|.+.|.+++|+|+.+||+||++|+||+.+|+.+|+|++++.+.                    +
T Consensus        73 ~~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~--------------------~  132 (285)
T 1uar_A           73 RLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPS--------------------Y  132 (285)
T ss_dssp             HTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCC--------------------C
T ss_pred             HcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCCc--------------------c
Confidence            99999999999999988766899999999999999999999999999999999987541                    2


Q ss_pred             CCccccc-ccCCccccCHHHHHHHhh---CCCcEEEccCCCC
Q 024280          231 GPTTFQT-KFQPHLIWTLEQVKRNIE---EGTYQLVDARSKA  268 (269)
Q Consensus       231 ~~~~~~~-~~~~~~~~~~~~v~~~l~---~~~~~iiDaRs~~  268 (269)
                      .+..|.. ..++...++.+++++.++   ..+.+|||+|+++
T Consensus       133 ~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~  174 (285)
T 1uar_A          133 PPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQ  174 (285)
T ss_dssp             CCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred             cCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCcc
Confidence            3456665 667788899999999884   2345799999864

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=99.96  E-value=2.7e-29  Score=235.52  Aligned_cols=164  Identities=26%  Similarity=0.493  Sum_probs=134.6

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccc-cccc--cCCCCCCCCCHHHHHHHHHH
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADR--TTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~-l~~~--~~~~~~~lp~~~~f~~~l~~  151 (269)
                      ..+|+++||++++++  ++|||||+.++... .+..+|..||||||+|||+.. +.+.  ...+.+++|+.+.|+++++.
T Consensus        13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~-~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~   89 (373)
T 1okg_A           13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKD-HGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA   89 (373)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSSTT-TTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEEcHHHHHHHcCC--cEEEEecCCccccc-cchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence            568999999998865  89999996543221 236899999999999999986 7654  45578899999999999999


Q ss_pred             cCCCCCCcEEEeC-CCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCC
Q 024280          152 LGLENKDGLVVYD-GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (269)
Q Consensus       152 lGI~~d~~VVvY~-~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~  230 (269)
                      +||+++++||||| ..|.++++|+||+|+.+|| ||++|+||+.+|+++|+|++++.+.                    +
T Consensus        90 ~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~~--------------------~  148 (373)
T 1okg_A           90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEPS--------------------S  148 (373)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCCC--------------------S
T ss_pred             cCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCCCC--------------------c
Confidence            9999999999999 6677766699999999999 9999999999999999999987541                    2


Q ss_pred             CCc-----ccccccCCccccCHHHHHHHhhCCCcEEEccCCCCC
Q 024280          231 GPT-----TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR  269 (269)
Q Consensus       231 ~~~-----~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~r  269 (269)
                      .+.     +|...++++++  .++|     +++.+|||+|+++|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~--~~~v-----~~~~~lIDvR~~~E  185 (373)
T 1okg_A          149 LPRPATHWPFKTAFQHHYL--VDEI-----PPQAIITDARSADR  185 (373)
T ss_dssp             CCCCCCCCCSCSSCCSBCC--GGGS-----CTTCCEEECSCHHH
T ss_pred             CccccccccccccCChHHH--HHHh-----ccCceEEeCCCHHH
Confidence            233     67777777765  5555     45788999998653

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=99.93  E-value=1.4e-25  Score=212.96  Aligned_cols=168  Identities=29%  Similarity=0.430  Sum_probs=137.9

Q ss_pred             CCCCCcccHHHHHHhhCC--------CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHH
Q 024280           72 SPKEPVVSVDWLHANLRE--------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEE  143 (269)
Q Consensus        72 ~~~~~lIs~~eL~~~l~~--------~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~  143 (269)
                      .....+|+++++.++++.        ++.+|||+|+.       ...+|..||||||+|+|+..+...   ..+++++.+
T Consensus       120 ~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~-------~~~e~~~ghIpgA~nip~~~~~~~---~~~~~~~~~  189 (423)
T 2wlr_A          120 PHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWG-------APKLYLISHIPGADYIDTNEVESE---PLWNKVSDE  189 (423)
T ss_dssp             TTGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESS-------SCSHHHHCBCTTCEEEEGGGTEET---TTTEECCHH
T ss_pred             CCCCcccCHHHHHHHhhccccccccCCCeEEEEecCC-------CchhhccCcCCCcEEcCHHHhccC---CCCCCCCHH
Confidence            344578999999998873        46899999931       246999999999999999887542   135788999


Q ss_pred             HHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHH
Q 024280          144 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIE  223 (269)
Q Consensus       144 ~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~  223 (269)
                      +|++.+..+|++++++||+||++|.+ |++++++|+.+||+||++|+||+.+|...|+|++++.+..             
T Consensus       190 ~l~~~~~~~gi~~~~~ivvyC~~G~~-a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~~~-------------  255 (423)
T 2wlr_A          190 QLKAMLAKHGIRHDTTVILYGRDVYA-AARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPK-------------  255 (423)
T ss_dssp             HHHHHHHHTTCCTTSEEEEECSSHHH-HHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSSCCC-------------
T ss_pred             HHHHHHHHcCCCCCCeEEEECCCchH-HHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCCCCC-------------
Confidence            99999999999999999999997764 8999999999999999999999999999999999865310             


Q ss_pred             HhhcCCCCCcccccc--cCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          224 KVYQGQVGPTTFQTK--FQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       224 ~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                           .....+|...  .++..+++.+++++.+++++.+|||+|+++
T Consensus       256 -----~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~  297 (423)
T 2wlr_A          256 -----VKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWP  297 (423)
T ss_dssp             -----CCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHH
T ss_pred             -----CCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchh
Confidence                 0122345543  467788999999999887789999999864

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=99.92  E-value=2e-25  Score=195.12  Aligned_cols=135  Identities=23%  Similarity=0.384  Sum_probs=114.2

Q ss_pred             CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccc--ccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCC
Q 024280           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD--GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG  167 (269)
Q Consensus        90 ~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~--~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g  167 (269)
                      ++++|||+|         +..+|..||||||+|+|+.  .+.  .....+++|+.+.|+++++.+|+  +++|||||+.|
T Consensus         5 ~~~~iiDvR---------~~~ey~~ghIpgAi~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~--~~~ivvyc~~g   71 (230)
T 2eg4_A            5 EDAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLR--LREEAELKALEGGLTELFQTLGL--RSPVVLYDEGL   71 (230)
T ss_dssp             TTCEEEECS---------CHHHHHHCBCTTCEECCCCSCCCC--CCSHHHHHHHHHHHHHHHHHTTC--CSSEEEECSSS
T ss_pred             CCEEEEECC---------ChhhHhhCcCCCCEECCccchhcc--cCCCCCcCCCHHHHHHHHHhcCC--CCEEEEEcCCC
Confidence            468999999         6899999999999999998  554  22334567778899999999987  78999999988


Q ss_pred             hHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCcccccccCCccccCH
Q 024280          168 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTL  247 (269)
Q Consensus       168 ~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (269)
                      ...|.+++|+|+ +||+||++|+||   |++  +|++++.+.                    +.+.+|....++..+++.
T Consensus        72 ~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~~~~--------------------~~~~~~~~~~~~~~~i~~  125 (230)
T 2eg4_A           72 TSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKEEPK--------------------PERTEVVAKLRRDWLLTA  125 (230)
T ss_dssp             CHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCSCCC--------------------CCCCCCCCCCCGGGBCCH
T ss_pred             CccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCCCCC--------------------cccccceecCCccceeCH
Confidence            756899999999 999999999999   987  899876541                    345677778888999999


Q ss_pred             HHHHHHhhCCCcEEEccCCCC
Q 024280          248 EQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       248 ~~v~~~l~~~~~~iiDaRs~~  268 (269)
                      +++++     +.+|||+|+++
T Consensus       126 ~e~~~-----~~~liDvR~~~  141 (230)
T 2eg4_A          126 DEAAR-----HPLLLDVRSPE  141 (230)
T ss_dssp             HHHHT-----CSCEEECSCHH
T ss_pred             HHHhh-----CCeEEeCCCHH
Confidence            99987     57899999865

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.91  E-value=3.8e-24  Score=173.16  Aligned_cols=115  Identities=16%  Similarity=0.243  Sum_probs=101.3

Q ss_pred             CCcccHHHHHHhhC--CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           75 EPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        75 ~~lIs~~eL~~~l~--~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ...|+++++.++++  +++.+|||||         +..+|..||||||+|+|+..+..      ...++.+.|.+.++..
T Consensus        22 ~~~is~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~l~~------~~~~~~~~~~~~~~~~   86 (139)
T 3d1p_A           22 IQSYSFEDMKRIVGKHDPNVVLVDVR---------EPSEYSIVHIPASINVPYRSHPD------AFALDPLEFEKQIGIP   86 (139)
T ss_dssp             CEECCHHHHHHHHHHTCTTEEEEECS---------CHHHHHHCCCTTCEECCTTTCTT------GGGSCHHHHHHHHSSC
T ss_pred             cceecHHHHHHHHhCCCCCeEEEECc---------CHHHHhCCCCCCcEEcCHHHhhh------hccCCHHHHHHHHhcc
Confidence            45799999999986  3579999999         68999999999999999987632      2346678899999888


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                      +++++++|||||.+|.+ |.++++.|+.+||+||++|+||+.+|..+|+|+..
T Consensus        87 ~~~~~~~ivvyC~~G~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~  138 (139)
T 3d1p_A           87 KPDSAKELIFYCASGKR-GGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD  138 (139)
T ss_dssp             CCCTTSEEEEECSSSHH-HHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred             CCCCCCeEEEECCCCch-HHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence            89999999999999876 88999999999999999999999999999999754

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=99.91  E-value=9.8e-25  Score=213.17  Aligned_cols=150  Identities=21%  Similarity=0.186  Sum_probs=122.4

Q ss_pred             CCcccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           75 EPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ...|+++||++++++ ++++|||||         +..+|..||||||+|||+..                 |...+..++
T Consensus         6 ~~~is~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAv~ip~~~-----------------~~~~~~~l~   59 (539)
T 1yt8_A            6 IAVRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSR-----------------LELEIHARV   59 (539)
T ss_dssp             CEEECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGG-----------------HHHHHHHHS
T ss_pred             CcccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCcCCCCEECCHHH-----------------HHHHHHhhC
Confidence            457999999999864 379999999         68999999999999999864                 556777888


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCc
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPT  233 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  233 (269)
                      .+++++|||||++|. .+.+++|+|+.+||+||++|+||+.+|+++|+|++++.+..  .+.                .+
T Consensus        60 ~~~~~~iVvyc~~g~-~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~--~~~----------------~g  120 (539)
T 1yt8_A           60 PRRDTPITVYDDGEG-LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVP--SKA----------------FG  120 (539)
T ss_dssp             CCTTSCEEEECSSSS-HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSSHH--HHH----------------HH
T ss_pred             CCCCCeEEEEECCCC-hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCcCc--Ccc----------------hh
Confidence            889999999999887 58999999999999999999999999999999999876521  000                01


Q ss_pred             ccccccCCccccCHHHHHHHhhC-CCcEEEccCCCCC
Q 024280          234 TFQTKFQPHLIWTLEQVKRNIEE-GTYQLVDARSKAR  269 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~~v~~~l~~-~~~~iiDaRs~~r  269 (269)
                      +|....+....++.++++..+++ ++++|||+|+++|
T Consensus       121 ~~~~~~~~~~~it~~~l~~~l~~~~~~~llDvR~~~e  157 (539)
T 1yt8_A          121 ELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDE  157 (539)
T ss_dssp             HHHHHHHCCCEECHHHHHHHHHTTCSEEEEECSCHHH
T ss_pred             hhhhhhcCCCccCHHHHHHHHhCCCCcEEEeCCCHHH
Confidence            22223344557899999999875 5689999998753

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.90  E-value=1.3e-23  Score=161.14  Aligned_cols=97  Identities=18%  Similarity=0.272  Sum_probs=85.0

Q ss_pred             cccHHHHHHhh-CCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           77 VVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        77 lIs~~eL~~~l-~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      .|++++|++++ ++++++|||||         +..+|..||||||+|+|+..+....                 .  .++
T Consensus         3 ~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~~~-----------------~--~l~   54 (100)
T 3foj_A            3 SITVTELKEKILDANPVNIVDVR---------TDQETAMGIIPGAETIPMNSIPDNL-----------------N--YFN   54 (100)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGGCG-----------------G--GSC
T ss_pred             ccCHHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHHHH-----------------H--hCC
Confidence            48999999988 45679999999         6899999999999999998764321                 1  247


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCce
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      ++++||+||.+|.+ |.++++.|+.+|| +|++|+||+.+|.++|+|+
T Consensus        55 ~~~~ivvyC~~g~r-s~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv  100 (100)
T 3foj_A           55 DNETYYIICKAGGR-SAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH  100 (100)
T ss_dssp             TTSEEEEECSSSHH-HHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred             CCCcEEEEcCCCch-HHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence            88999999999876 8899999999999 9999999999999999986

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=99.89  E-value=8e-24  Score=200.88  Aligned_cols=147  Identities=11%  Similarity=0.064  Sum_probs=113.5

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      .++||++||++++++++++|||+|+...........+|..||||||+|+|++.+         .+|+.+.|+++++++||
T Consensus         3 ~~~is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~l---------~lp~~~~f~~~~~~lgi   73 (423)
T 2wlr_A            3 SAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWL---------DKMSTEQLNAWIKQHNL   73 (423)
T ss_dssp             -CCCCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGGG---------GGCCHHHHHHHHHHTTC
T ss_pred             ccccCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHHh---------cCCCHHHHHHHHHHcCC
Confidence            368999999999987789999999432110011124688999999999998764         28899999999999999


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCcc
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTT  234 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  234 (269)
                      +++++|||||+.+  .|+|+||+|+.+||+||++||||   |.++|+ ++...                           
T Consensus        74 ~~~~~vVvy~~~~--~a~r~~w~l~~~G~~~V~vl~Gg---~~~~g~-~~~~~---------------------------  120 (423)
T 2wlr_A           74 KTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILSDA---LSEPSR-LQKLP---------------------------  120 (423)
T ss_dssp             CTTSCEEEESCHH--HHHHHHHHHHHTTCCCEEEBTTT---TSCGGG-CBCCT---------------------------
T ss_pred             CCCCeEEEECCCC--CHHHHHHHHHHcCCceeEeccch---hhcCCC-cccCC---------------------------
Confidence            9999999999874  59999999999999999999998   454565 22111                           


Q ss_pred             cccccCCccccCHHHHHHHhh--------CCCcEEEccC--CCC
Q 024280          235 FQTKFQPHLIWTLEQVKRNIE--------EGTYQLVDAR--SKA  268 (269)
Q Consensus       235 ~~~~~~~~~~~~~~~v~~~l~--------~~~~~iiDaR--s~~  268 (269)
                           +...+++.+++++.++        +++.+|||+|  +++
T Consensus       121 -----~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~  159 (423)
T 2wlr_A          121 -----HFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPK  159 (423)
T ss_dssp             -----TGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCS
T ss_pred             -----CCCcccCHHHHHHHhhccccccccCCCeEEEEecCCCch
Confidence                 1123577788887776        3578999999  754

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.89  E-value=2.7e-23  Score=161.29  Aligned_cols=102  Identities=20%  Similarity=0.275  Sum_probs=90.0

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|+++++.+++++++.+|||||         +..+|..||||||+|+|+..                 |.+.+..  ++
T Consensus         5 ~~i~~~~l~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~-----------------l~~~~~~--l~   56 (108)
T 1gmx_A            5 ECINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTNDT-----------------LGAFMRD--ND   56 (108)
T ss_dssp             EEECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHHH-----------------HHHHHHH--SC
T ss_pred             cccCHHHHHHHHhCCCCEEEEcC---------CHHHHHhCCCccCEeCCHHH-----------------HHHHHHh--cC
Confidence            46999999999877779999999         68999999999999999764                 4455665  58


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~  207 (269)
                      ++++|||||.+|.+ +.++++.|+.+||+||++|+||+.+|..+ +|++++.
T Consensus        57 ~~~~ivvyc~~g~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~~  106 (108)
T 1gmx_A           57 FDTPVMVMCYHGNS-SKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY  106 (108)
T ss_dssp             TTSCEEEECSSSSH-HHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred             CCCCEEEEcCCCch-HHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccccc
Confidence            89999999999885 88999999999999999999999999999 9998753

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.89  E-value=2.6e-23  Score=161.24  Aligned_cols=99  Identities=22%  Similarity=0.403  Sum_probs=84.6

Q ss_pred             cccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           77 VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        77 lIs~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      -||+++|++.+.+ ++++|||||         ...+|..||||||+|+|++.+...-                 .+  ++
T Consensus         3 ~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~~~-----------------~~--l~   54 (103)
T 3iwh_A            3 SITTDELKNKLLESKPVQIVDVR---------TDEETAMGYIPNAKLIPMDTIPDNL-----------------NS--FN   54 (103)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGGCG-----------------GG--CC
T ss_pred             CcCHHHHHHHHhCCCCeEEEECC---------ChhHHhcCccCCcccCcccchhhhh-----------------hh--hc
Confidence            3899999997754 468999999         6899999999999999998764321                 12  47


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                      ++++||+||.+|.+ |..++..|+..||+++ .|.||+.+|+++|+|+++
T Consensus        55 ~~~~ivv~C~~G~r-S~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pves  102 (103)
T 3iwh_A           55 KNEIYYIVCAGGVR-SAKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKS  102 (103)
T ss_dssp             TTSEEEEECSSSSH-HHHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred             CCCeEEEECCCCHH-HHHHHHHHHHcCCCEE-EecChHHHHHHCCCccee
Confidence            89999999999886 7888899999999765 689999999999999986

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.89  E-value=2.8e-23  Score=167.71  Aligned_cols=112  Identities=18%  Similarity=0.198  Sum_probs=89.4

Q ss_pred             CcccHHHHHHhhC--CCCcEEEEeccCCCCCCCCCHhhHhh-CCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           76 PVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQV-AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        76 ~lIs~~eL~~~l~--~~~~vIIDvR~~~~~~~~~~~~ey~~-gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ..|++++|.++++  +++++|||||         +..+|.. ||||||+|||+..+........ ...          ..
T Consensus        22 ~~is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~-~~~----------~~   81 (139)
T 2hhg_A           22 ETLTTADAIALHKSGASDVVIVDIR---------DPREIERDGKIPGSFSCTRGMLEFWIDPQS-PYA----------KP   81 (139)
T ss_dssp             EEECHHHHHHHHHTTCTTEEEEECS---------CHHHHHHHCCCTTCEECCGGGHHHHHCTTS-TTC----------CG
T ss_pred             CccCHHHHHHHHhccCCCeEEEECC---------CHHHHHhCCCCCCeEECChHHHHHhcCccc-hhh----------hc
Confidence            5799999999987  5679999999         6899999 9999999999987643211000 000          12


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      +++++++|||||.+|.+ |.+++++|+.+||+||++|+||+.+|..+|+|++++.+
T Consensus        82 ~~~~~~~ivvyC~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  136 (139)
T 2hhg_A           82 IFQEDKKFVFYCAGGLR-SALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP  136 (139)
T ss_dssp             GGGSSSEEEEECSSSHH-HHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred             cCCCCCeEEEECCCChH-HHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence            45789999999999975 88999999999999999999999999999999998754

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.89  E-value=4.5e-23  Score=160.52  Aligned_cols=101  Identities=19%  Similarity=0.257  Sum_probs=87.5

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|++++|.+++++  .+|||||         ...+|..||||||+|+|+..+                 .+.+..  ++
T Consensus         4 ~~is~~el~~~l~~--~~iiDvR---------~~~e~~~ghIpgA~~ip~~~l-----------------~~~~~~--l~   53 (108)
T 3gk5_A            4 RSINAADLYENIKA--YTVLDVR---------EPFELIFGSIANSINIPISEL-----------------REKWKI--LE   53 (108)
T ss_dssp             CEECHHHHHHTTTT--CEEEECS---------CHHHHTTCBCTTCEECCHHHH-----------------HHHGGG--SC
T ss_pred             cEeCHHHHHHHHcC--CEEEECC---------CHHHHhcCcCCCCEEcCHHHH-----------------HHHHHh--CC
Confidence            45999999999876  8999999         689999999999999998653                 334444  47


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      ++++||+||.+|.+ |.+++++|+.+|| +|++|+||+.+|..+|+|+++..+
T Consensus        54 ~~~~ivvyC~~G~r-s~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~  104 (108)
T 3gk5_A           54 RDKKYAVICAHGNR-SAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH  104 (108)
T ss_dssp             TTSCEEEECSSSHH-HHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred             CCCeEEEEcCCCcH-HHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence            88999999999886 8899999999999 999999999999999999998765

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.88  E-value=6e-23  Score=159.21  Aligned_cols=100  Identities=29%  Similarity=0.448  Sum_probs=78.2

Q ss_pred             HHHHHhhC--CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 024280           81 DWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD  158 (269)
Q Consensus        81 ~eL~~~l~--~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~  158 (269)
                      ++|+++++  +++++|||||         +..+|..||||||+|||+..+..                ....  ++++++
T Consensus         1 eel~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~----------------~~~~--~l~~~~   53 (106)
T 3hix_A            1 MVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLVD----------------RASS--SLEKSR   53 (106)
T ss_dssp             ------------CCEEEECS---------CHHHHHTCEETTCEECCGGGHHH----------------HHHH--HSCTTS
T ss_pred             ChHHHHHHcCCCCeEEEECC---------CHHHHhcCcCCCCEeCCHHHHHH----------------HHHh--cCCCCC
Confidence            35777776  3468999999         68999999999999999876422                1112  257889


Q ss_pred             cEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          159 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       159 ~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      +|||||.+|.+ +.+++++|+.+||+||++|+||+.+|+++|+|+++..+
T Consensus        54 ~ivvyc~~g~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~  102 (106)
T 3hix_A           54 DIYVYGAGDEQ-TSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH  102 (106)
T ss_dssp             CEEEECSSHHH-HHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred             eEEEEECCCCh-HHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence            99999998876 89999999999999999999999999999999998764

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.88  E-value=8.9e-23  Score=166.48  Aligned_cols=104  Identities=25%  Similarity=0.396  Sum_probs=89.1

Q ss_pred             cccHHHHHHhhCC--CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           77 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        77 lIs~~eL~~~l~~--~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      .||+++|++++++  ++++|||||         +..+|..||||||+|||+..+.                 +.+. .++
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~-----------------~~~~-~~l   53 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLV-----------------DRAS-SSL   53 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECS---------CHHHHHHCEETTCEECCGGGHH-----------------HHHH-TTS
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECC---------CHHHHhCCCCCCCEEcCHHHHH-----------------HHHH-hcC
Confidence            3899999999874  358999999         6899999999999999987643                 2221 257


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      +++++|||||.+|.+ |.++++.|+.+||+||++|+||+.+|.++|+|++++.+
T Consensus        54 ~~~~~ivvyC~~g~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  106 (141)
T 3ilm_A           54 EKSRDIYVYGAGDEQ-TSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE  106 (141)
T ss_dssp             CTTSEEEEECSSHHH-HHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred             CCCCeEEEEECCChH-HHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence            889999999998765 88999999999999999999999999999999999764

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.88  E-value=1.4e-22  Score=165.83  Aligned_cols=105  Identities=22%  Similarity=0.318  Sum_probs=90.5

Q ss_pred             CcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..|+++||.++++++  +++|||||         +..+|..||||||+|||+..+....                  ..+
T Consensus        16 ~~is~~el~~~l~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~~~------------------~~~   68 (144)
T 3nhv_A           16 YETDIADLSIDIKKGYEGIIVVDVR---------DAEAYKECHIPTAISIPGNKINEDT------------------TKR   68 (144)
T ss_dssp             TEEEHHHHHHHHHTTCCSEEEEECS---------CHHHHHHCBCTTCEECCGGGCSTTT------------------TTT
T ss_pred             cccCHHHHHHHHHcCCCCEEEEECc---------CHHHHhcCCCCCCEECCHHHHhHHH------------------Hhh
Confidence            468999999998764  68999999         6899999999999999998764311                  124


Q ss_pred             CCCCCcEEEeCCCCh-HHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          154 LENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       154 I~~d~~VVvY~~~g~-~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      ++++++|||||.+|. ..|.+++++|+.+|| +|++|+||+.+|.++|+|++++.+
T Consensus        69 l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~  123 (144)
T 3nhv_A           69 LSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLG  123 (144)
T ss_dssp             CCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSG
T ss_pred             CCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCC
Confidence            688999999999884 358999999999999 699999999999999999999764

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.88  E-value=6.4e-23  Score=164.41  Aligned_cols=113  Identities=19%  Similarity=0.193  Sum_probs=92.9

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      ...|+++++.++++ ++.+|||||         +..+|..||||||+|||+..+..     .+++++.+.+++.+.  .+
T Consensus        17 ~~~is~~e~~~~l~-~~~~lIDvR---------~~~e~~~ghIpgAinip~~~~~~-----~~~~~~~~~~~~~~~--~l   79 (129)
T 1tq1_A           17 PSSVSVTVAHDLLL-AGHRYLDVR---------TPEEFSQGHACGAINVPYMNRGA-----SGMSKNTDFLEQVSS--HF   79 (129)
T ss_dssp             CEEEEHHHHHHHHH-HTCCEEEES---------CHHHHHHCCBTTBEECCSCCCST-----TTCCCTTTHHHHHTT--TC
T ss_pred             CcccCHHHHHHHhc-CCCEEEECC---------CHHHHhcCCCCCcEECcHhhccc-----ccccCCHHHHHHHHh--hC
Confidence            35799999999886 468999999         68999999999999999876532     234444444455444  36


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                      +++++|||||.+|.+ |.++++.|+.+||+||++|+||+.+|..+|+|+++
T Consensus        80 ~~~~~ivvyC~~G~r-s~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~  129 (129)
T 1tq1_A           80 GQSDNIIVGCQSGGR-SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA  129 (129)
T ss_dssp             CTTSSEEEEESSCSH-HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred             CCCCeEEEECCCCcH-HHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCCC
Confidence            889999999999886 88899999999999999999999999999999863

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.88  E-value=1.9e-22  Score=163.56  Aligned_cols=106  Identities=18%  Similarity=0.278  Sum_probs=91.8

Q ss_pred             CcccHHHHHHhhC-CCCcEEEEeccCCCCCCCCCHhhHhh-CC--CCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           76 PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQV-AH--IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        76 ~lIs~~eL~~~l~-~~~~vIIDvR~~~~~~~~~~~~ey~~-gH--IPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      ..|++++|.++++ +++.+|||||         ...+|.. ||  ||||+|||+..+..               ...+  
T Consensus        23 ~~is~~el~~~l~~~~~~~liDVR---------~~~E~~~~gh~~IpgAinip~~~l~~---------------~~~~--   76 (137)
T 1qxn_A           23 VMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGKLEP---------------LLAK--   76 (137)
T ss_dssp             EEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTTSHH---------------HHHH--
T ss_pred             cccCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCcCCCCCEEcchHHhhh---------------HHhh--
Confidence            4699999999987 6679999999         6899999 99  99999999876531               0122  


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      .+++++++|||||.+|.+ |.++++.|+.+||+||++|+||+.+|..+|+|++++.+
T Consensus        77 ~~l~~~~~ivvyC~~G~r-S~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  132 (137)
T 1qxn_A           77 SGLDPEKPVVVFCKTAAR-AALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSH  132 (137)
T ss_dssp             HCCCTTSCEEEECCSSSC-HHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCC
T ss_pred             ccCCCCCeEEEEcCCCcH-HHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccc
Confidence            257899999999999986 78899999999999999999999999999999998654

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=99.87  E-value=5.4e-22  Score=176.86  Aligned_cols=118  Identities=26%  Similarity=0.375  Sum_probs=103.3

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHh--------hCCCCCCeeccccccccccCCCCCCCCCHHHH
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ--------VAHIPGALFFDVDGVADRTTNLPHMLPSEEAF  145 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~--------~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f  145 (269)
                      ....|+++++.+++++++.+|||||         ...+|.        .||||||+|+|+..+.+.+..   .+.+ ++|
T Consensus       145 ~~~~i~~~~l~~~l~~~~~~liDvR---------~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~---~~~~-~~l  211 (271)
T 1e0c_A          145 DEPTASRDYLLGRLGAADLAIWDAR---------SPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRA---LRIR-TDI  211 (271)
T ss_dssp             STTBCCHHHHHHHTTCTTEEEEECS---------CHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGT---TEEC-TTH
T ss_pred             ccccccHHHHHHHhcCCCcEEEEcC---------ChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCC---CCCH-HHH
Confidence            4467999999999988889999999         688999        899999999999987654321   2233 789


Q ss_pred             HHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhC-CCceec
Q 024280          146 AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVES  205 (269)
Q Consensus       146 ~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~-G~pv~~  205 (269)
                      ++.+..+|++++++||+||.+|.+ |+.+++.|+.+||+||++|+||+.+|.+. |+|+++
T Consensus       212 ~~~~~~~~~~~~~~ivvyC~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~  271 (271)
T 1e0c_A          212 AGRLEELGITPDKEIVTHCQTHHR-SGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL  271 (271)
T ss_dssp             HHHHHHTTCCTTSEEEEECSSSSH-HHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred             HHHHHHcCCCCCCCEEEECCchHH-HHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence            999999999999999999999986 88999999999999999999999999998 999864

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.87  E-value=6.6e-23  Score=159.97  Aligned_cols=101  Identities=17%  Similarity=0.260  Sum_probs=86.0

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|++++|    .+++++|||||         ...+|..||||||+|+|+..+                 .+.+..++++
T Consensus         5 ~~is~~el----~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l-----------------~~~~~~~~~~   54 (110)
T 2k0z_A            5 YAISLEEV----NFNDFIVVDVR---------ELDEYEELHLPNATLISVNDQ-----------------EKLADFLSQH   54 (110)
T ss_dssp             TEEETTTC----CGGGSEEEEEE---------CHHHHHHSBCTTEEEEETTCH-----------------HHHHHHHHSC
T ss_pred             eeeCHHHh----ccCCeEEEECC---------CHHHHhcCcCCCCEEcCHHHH-----------------HHHHHhcccC
Confidence            45777776    24568999999         689999999999999998764                 2334455789


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      ++++|||||.+|.+ |.++++.|+.+||++ ++|+||+.+|..+|+|++++..
T Consensus        55 ~~~~ivvyC~~G~r-s~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~~  105 (110)
T 2k0z_A           55 KDKKVLLHCRAGRR-ALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDDT  105 (110)
T ss_dssp             SSSCEEEECSSSHH-HHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCCS
T ss_pred             CCCEEEEEeCCCch-HHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCCC
Confidence            99999999999875 889999999999999 9999999999999999988654

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=99.86  E-value=7.2e-22  Score=177.30  Aligned_cols=119  Identities=22%  Similarity=0.345  Sum_probs=104.1

Q ss_pred             CCCcccHHHHHHhhC---CCCcEEEEeccCCCCCCCCCHhhHh----------------hCCCCCCeeccccccccccCC
Q 024280           74 KEPVVSVDWLHANLR---EPDLKVLDASWYMPDEQRNPFQEYQ----------------VAHIPGALFFDVDGVADRTTN  134 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~---~~~~vIIDvR~~~~~~~~~~~~ey~----------------~gHIPGAi~ip~~~l~~~~~~  134 (269)
                      ...+|++++|.++++   +.+..|||||         ...+|.                .||||||+|+|+..+.+.+  
T Consensus       144 ~~~~i~~~el~~~l~~~~~~~~~liDvR---------~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~--  212 (285)
T 1uar_A          144 ESIRAYRDDVLEHIIKVKEGKGALVDVR---------SPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD--  212 (285)
T ss_dssp             GGGEECHHHHHHHHHHHHTTSEEEEECS---------CHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT--
T ss_pred             cceEEcHHHHHHHHhhcccCCCcEEEcC---------CccceeeeccccccccccccccCCcCCCccccCHHHhcCCC--
Confidence            346799999999883   1335799999         678887                7999999999999876543  


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHH-HcCCCcEEEccCcHHHHH-hCCCceecC
Q 024280          135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR-VFGHDRVWVLDGGLPRWR-ASGYDVESS  206 (269)
Q Consensus       135 ~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~-~~G~~nV~vLdGG~~~W~-~~G~pv~~~  206 (269)
                        +.+++.++|.+.+..+|++++++|||||++|.+ |++++++|+ .+||+||++|+||+.+|. ..|+|++++
T Consensus       213 --~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~r-s~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g  283 (285)
T 1uar_A          213 --GTFKSAEELRALYEPLGITKDKDIVVYCRIAER-SSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG  283 (285)
T ss_dssp             --SCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHH-HHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred             --CcCCCHHHHHHHHHHcCCCCCCCEEEECCchHH-HHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence              468899999999999999999999999999875 889999999 999999999999999998 799999875

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=99.86  E-value=1.7e-21  Score=174.15  Aligned_cols=116  Identities=23%  Similarity=0.374  Sum_probs=101.5

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhh----------------CCCCCCeeccccccccccCCCCCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------------AHIPGALFFDVDGVADRTTNLPHM  138 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~----------------gHIPGAi~ip~~~l~~~~~~~~~~  138 (269)
                      ...++++++.+++++++  |||+|         ...+|..                ||||||+|+|+..+...    .+.
T Consensus       143 ~~~~~~~el~~~~~~~~--liDvR---------~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~----~~~  207 (277)
T 3aay_A          143 TIRAFRDEVLAAINVKN--LIDVR---------SPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANE----DGT  207 (277)
T ss_dssp             GGEECHHHHHHTTTTSE--EEECS---------CHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCT----TSC
T ss_pred             chhcCHHHHHHhcCCCC--EEEeC---------ChHHeeeeecccccccccccccCCcCCCceecCHHHhcCC----CCc
Confidence            34588999999987655  99999         6788875                99999999999876543    246


Q ss_pred             CCCHHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHH-cCCCcEEEccCcHHHHHh-CCCceecC
Q 024280          139 LPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESS  206 (269)
Q Consensus       139 lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~-~G~~nV~vLdGG~~~W~~-~G~pv~~~  206 (269)
                      +++.++|++.+.++|++++++||+||++|.+ |++++++|+. +||+||++|+||+.+|.. .|+|++++
T Consensus       208 ~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~r-s~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g  276 (277)
T 3aay_A          208 FKSDEELAKLYADAGLDNSKETIAYCRIGER-SSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG  276 (277)
T ss_dssp             BCCHHHHHHHHHHHTCCTTSCEEEECSSHHH-HHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred             CCCHHHHHHHHHHcCCCCCCCEEEEcCcHHH-HHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence            7889999999999999999999999999886 7889999985 999999999999999999 99999875

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.85  E-value=4.7e-22  Score=158.32  Aligned_cols=103  Identities=19%  Similarity=0.310  Sum_probs=86.7

Q ss_pred             CcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhH-hhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc
Q 024280           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey-~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l  152 (269)
                      ..|++++|.++++++  +++|||||         ...+| ..||||||+|||+..+                 .+.+.. 
T Consensus        15 ~~is~~el~~~l~~~~~~~~liDvR---------~~~e~~~~ghIpgA~nip~~~l-----------------~~~~~~-   67 (124)
T 3flh_A           15 LYIDHHTVLADMQNATGKYVVLDVR---------NAPAQVKKDQIKGAIAMPAKDL-----------------ATRIGE-   67 (124)
T ss_dssp             TEECHHHHHHHHHHTCCCEEEEECC---------CSCHHHHCCEETTCEECCHHHH-----------------HHHGGG-
T ss_pred             ceecHHHHHHHHHcCCCCEEEEECC---------CHHHHHhcCcCCCCEECCHHHH-----------------HHHHhc-
Confidence            469999999988754  48999999         56787 9999999999998653                 333433 


Q ss_pred             CCCCCCcEEEeCCCChHH-HHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCC
Q 024280          153 GLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~-A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~  207 (269)
                       ++++++|||||.+|.++ |.++++.|+.+||+ |++|+||+.+|+.+|+|+.+.+
T Consensus        68 -l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~~  121 (124)
T 3flh_A           68 -LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHHH  121 (124)
T ss_dssp             -SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred             -CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence             57899999999998864 78999999999997 9999999999999999988754

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=99.85  E-value=4.1e-22  Score=191.22  Aligned_cols=128  Identities=21%  Similarity=0.198  Sum_probs=111.3

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      ..+|+++||++++++ + +|||+|         +..+|..||||||+|+|++.                .|++++++++ 
T Consensus       272 ~~~is~~~l~~~l~~-~-~iiD~R---------~~~~y~~ghIpGA~~i~~~~----------------~~~~~~~~l~-  323 (474)
T 3tp9_A          272 RVDLPPERVRAWREG-G-VVLDVR---------PADAFAKRHLAGSLNIPWNK----------------SFVTWAGWLL-  323 (474)
T ss_dssp             ECCCCGGGHHHHHHT-S-EEEECS---------CHHHHHHSEETTCEECCSST----------------THHHHHHHHC-
T ss_pred             CceeCHHHHHHHhCC-C-EEEECC---------ChHHHhccCCCCeEEECcch----------------HHHHHHHhcC-
Confidence            357999999999876 4 999999         68999999999999999763                4888999998 


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCCCcc
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTT  234 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  234 (269)
                      +++++|||||+.+.  ++++||+|+.+||++|++|.+|+.+|..+|+++++..                           
T Consensus       324 ~~~~~vvvy~~~~~--~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~---------------------------  374 (474)
T 3tp9_A          324 PADRPIHLLAADAI--APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYA---------------------------  374 (474)
T ss_dssp             CSSSCEEEECCTTT--HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCE---------------------------
T ss_pred             CCCCeEEEEECCCc--HHHHHHHHHHcCCcceEEecCcHHHHHhccccccccc---------------------------
Confidence            88999999999876  7889999999999999986669999999998876643                           


Q ss_pred             cccccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          235 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       235 ~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                               .++.+++++.+++++.+|||+|+++
T Consensus       375 ---------~i~~~~l~~~~~~~~~~lvDvR~~~  399 (474)
T 3tp9_A          375 ---------NVSPDEVRGALAQQGLWLLDVRNVD  399 (474)
T ss_dssp             ---------EECHHHHHHTTTTTCCEEEECSCHH
T ss_pred             ---------ccCHHHHHHHhcCCCcEEEECCCHH
Confidence                     2678899998887889999999865

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1e-21  Score=160.81  Aligned_cols=116  Identities=11%  Similarity=0.089  Sum_probs=89.2

Q ss_pred             CcccHHHHHHhhCC-CCcEEEEeccCCCCCCCCCHhhHhh-CCC------CCCeeccccccccccCCCCCCCCC-HHHHH
Q 024280           76 PVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV-AHI------PGALFFDVDGVADRTTNLPHMLPS-EEAFA  146 (269)
Q Consensus        76 ~lIs~~eL~~~l~~-~~~vIIDvR~~~~~~~~~~~~ey~~-gHI------PGAi~ip~~~l~~~~~~~~~~lp~-~~~f~  146 (269)
                      ..|+++++.+++++ ++.+|||||         +..+|.. |||      |||+|||+.. .+.     ...+. .+++.
T Consensus         5 ~~is~~el~~~l~~~~~~~liDVR---------~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~~-----~~~~~~~~~l~   69 (148)
T 2fsx_A            5 GDITPLQAWEMLSDNPRAVLVDVR---------CEAEWRFVGVPDLSSLGREVVYVEWAT-SDG-----THNDNFLAELR   69 (148)
T ss_dssp             EEECHHHHHHHHHHCTTCEEEECS---------CHHHHHHTCEECCGGGTCCCEECCSBC-TTS-----CBCTTHHHHHH
T ss_pred             ccCCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCCccccCCCCcEEeeeec-ccc-----ccCHHHHHHHH
Confidence            46999999998874 679999999         6899997 999      9999999886 211     01121 34566


Q ss_pred             HHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcH------------HHHHhCCCceecCC
Q 024280          147 AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL------------PRWRASGYDVESSA  207 (269)
Q Consensus       147 ~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~------------~~W~~~G~pv~~~~  207 (269)
                      +.+++.|++++++|||||.+|.+ |.++++.|+.+||+||++|+||+            .+|+++|+|+++..
T Consensus        70 ~~l~~~~~~~~~~ivvyC~~G~r-S~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~  141 (148)
T 2fsx_A           70 DRIPADADQHERPVIFLCRSGNR-SIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR  141 (148)
T ss_dssp             HHCC-------CCEEEECSSSST-HHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred             HHHhhccCCCCCEEEEEcCCChh-HHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence            66666788999999999999986 78999999999999999999999            68999999998754

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.84  E-value=3.1e-21  Score=159.16  Aligned_cols=110  Identities=23%  Similarity=0.321  Sum_probs=88.0

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      ...|++++|.+++++++++|||||         +..+|..||||||+|||+..+..             .+.+++..  +
T Consensus        27 ~~~Is~~el~~~l~~~~~~lIDvR---------~~~ey~~ghIpgAinip~~~l~~-------------~~~~l~~~--~   82 (152)
T 1t3k_A           27 ISYITSTQLLPLHRRPNIAIIDVR---------DEERNYDGHIAGSLHYASGSFDD-------------KISHLVQN--V   82 (152)
T ss_dssp             SEEECTTTTTTCCCCTTEEEEEES---------CSHHHHSSCCCSSEEECCSSSST-------------THHHHHHT--C
T ss_pred             CceECHHHHHHHhcCCCEEEEECC---------ChhhccCccCCCCEECCHHHHHH-------------HHHHHHHh--c
Confidence            457999999998877789999999         57899999999999999987532             24555554  3


Q ss_pred             CCCCcEEEeCC-CChHH--HHH-----HHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          155 ENKDGLVVYDG-KGIFS--AAR-----VWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       155 ~~d~~VVvY~~-~g~~~--A~r-----a~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      +++++|||||. +|.++  +++     ++|+|+.+||+||++|+||+.+|.++|+|+++..+
T Consensus        83 ~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~  144 (152)
T 1t3k_A           83 KDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE  144 (152)
T ss_dssp             CSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred             CCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence            68899999998 77652  222     23344668999999999999999999999988654

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=99.84  E-value=7.6e-21  Score=173.05  Aligned_cols=117  Identities=18%  Similarity=0.240  Sum_probs=103.8

Q ss_pred             CCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhH-----------hhCCCCCCeeccccccccccCCCCCCCCC
Q 024280           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-----------QVAHIPGALFFDVDGVADRTTNLPHMLPS  141 (269)
Q Consensus        73 ~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey-----------~~gHIPGAi~ip~~~l~~~~~~~~~~lp~  141 (269)
                      .+..+++++++.+++++++.+|||||         ...+|           ..||||||+|||+.++.+..    +.+.+
T Consensus       172 ~~~~~i~~~e~~~~~~~~~~~liDvR---------~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~----~~~~~  238 (302)
T 3olh_A          172 DPAFIKTYEDIKENLESRRFQVVDSR---------ATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQE----GLEKS  238 (302)
T ss_dssp             CGGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSS----SCBCC
T ss_pred             CccceecHHHHHHhhcCCCcEEEecC---------CHHHccccccCCCcCCcCccCCCceecCHHHhcCCC----CccCC
Confidence            34568999999999877789999999         68899           78999999999999876543    35678


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCce
Q 024280          142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       142 ~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      .++|.+.+..++++++++||+||++|.+ |+.++..|+.+||++|++|+|||.+|...|+|.
T Consensus       239 ~~~l~~~~~~~~~~~~~~iv~yC~sG~r-s~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~  299 (302)
T 3olh_A          239 PEEIRHLFQEKKVDLSKPLVATCGSGVT-ACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE  299 (302)
T ss_dssp             HHHHHHHHHHTTCCTTSCEEEECSSSST-THHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred             HHHHHHHHHhcCCCCCCCEEEECCChHH-HHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence            8999999999999999999999999987 677888999999999999999999999998874

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.83  E-value=1.2e-21  Score=155.18  Aligned_cols=110  Identities=20%  Similarity=0.145  Sum_probs=82.7

Q ss_pred             cccHHHHHHhhCCC-CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH----HHH
Q 024280           77 VVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA----VSA  151 (269)
Q Consensus        77 lIs~~eL~~~l~~~-~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~----l~~  151 (269)
                      -|+++||+++++++ +++|||||         +..+|..||||||+|+|+..+......      ....+.+.    -..
T Consensus         2 ~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~------~~~~~~~~l~~~~~~   66 (127)
T 3i2v_A            2 RVSVTDYKRLLDSGAFHLLLDVR---------PQVEVDICRLPHALHIPLKHLERRDAE------SLKLLKEAIWEEKQG   66 (127)
T ss_dssp             EECHHHHHHHHHHTCCCEEEECS---------CHHHHHHCCCTTSEECCHHHHHTTCHH------HHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHhCCCCeEEEECC---------CHHHhhheecCCceeCChHHHhhhhhh------hHHHHHHHHhhhccc
Confidence            38999999998755 58999999         689999999999999999876542110      01112222    233


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHc------CCCcEEEccCcHHHHHhCCCc
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVF------GHDRVWVLDGGLPRWRASGYD  202 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~------G~~nV~vLdGG~~~W~~~G~p  202 (269)
                      .|++++++|||||.+|.+ +..+++.|+.+      ||.+|++|+||+.+|..+..|
T Consensus        67 ~~~~~~~~ivv~C~~G~r-s~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~  122 (127)
T 3i2v_A           67 TQEGAAVPIYVICKLGND-SQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG  122 (127)
T ss_dssp             C---CCEEEEEECSSSSH-HHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred             ccCCCCCeEEEEcCCCCc-HHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence            567778899999999986 67777888777      799999999999999987654

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=99.83  E-value=9.2e-21  Score=169.80  Aligned_cols=117  Identities=26%  Similarity=0.363  Sum_probs=95.4

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhH-----------hhCCCCCCeeccccccccccCCCCCCCCCH
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-----------QVAHIPGALFFDVDGVADRTTNLPHMLPSE  142 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey-----------~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~  142 (269)
                      ....|+++++.+++++++.+|||||         ...+|           ..||||||+|||+..+.. +    +.+.+.
T Consensus       150 ~~~~i~~~e~~~~~~~~~~~liDvR---------~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~-~----~~~~~~  215 (280)
T 1urh_A          150 PEAVVKVTDVLLASHENTAQIIDAR---------PAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-E----GELKTT  215 (280)
T ss_dssp             GGGBCCHHHHHHHHHHTCSEEEECS---------CHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-S----SSBCCH
T ss_pred             cccEEcHHHHHHHhcCCCcEEEeCC---------chhhcccccCCCCCCCcCccCCCceEeeHHHhhc-C----CccCCH
Confidence            4467999999999877779999999         68899           689999999999998764 1    346678


Q ss_pred             HHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh-CCCceec
Q 024280          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVES  205 (269)
Q Consensus       143 ~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~-~G~pv~~  205 (269)
                      +++.+.+...+++++++||+||.+|.+ |+.++..|+.+||+||++|+||+.+|.. .|+|+++
T Consensus       216 ~~l~~~~~~~~~~~~~~ivv~C~~G~r-s~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~  278 (280)
T 1urh_A          216 DELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP  278 (280)
T ss_dssp             HHHHHHHHTTTCCSSSCEEEECCSSST-HHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred             HHHHHHHHHcCCCCCCCEEEECChHHH-HHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence            899999999999999999999999987 7888999999999999999999999987 5999875

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=99.83  E-value=1.9e-20  Score=169.47  Aligned_cols=120  Identities=18%  Similarity=0.218  Sum_probs=105.6

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhH------------hhCCCCCCeeccccccccccCCCCCCCCC
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY------------QVAHIPGALFFDVDGVADRTTNLPHMLPS  141 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey------------~~gHIPGAi~ip~~~l~~~~~~~~~~lp~  141 (269)
                      ....|+++++.+++++++.+|||||         ...+|            ..||||||+|||+.++.+.+    +.+.+
T Consensus       158 ~~~~i~~~e~~~~~~~~~~~liDvR---------~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~----~~~~~  224 (296)
T 1rhs_A          158 RSLLKTYEQVLENLESKRFQLVDSR---------AQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED----GFEKS  224 (296)
T ss_dssp             GGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT----SCBCC
T ss_pred             cceEEcHHHHHHHhcCCCceEEeCC---------chhhcccccCCcccCCCcCccCCCCEeecHHHhcCCC----CcCCC
Confidence            3468999999999876778999999         68999            78999999999999876543    34667


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh-CCCceecCC
Q 024280          142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (269)
Q Consensus       142 ~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~-~G~pv~~~~  207 (269)
                      .+++.+.+..+|++++++||+||.+|.+ |+.++..|+.+||+||++|+||+.+|.. .++|++++.
T Consensus       225 ~~~l~~~~~~~~~~~~~~ivv~C~sG~r-s~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~  290 (296)
T 1rhs_A          225 PEELRAMFEAKKVDLTKPLIATCRKGVT-ACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQ  290 (296)
T ss_dssp             HHHHHHHHHHTTCCTTSCEEEECSSSST-HHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred             HHHHHHHHHHcCCCCCCCEEEECCcHHH-HHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence            8899999999999999999999999987 7778889999999999999999999998 899998864

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.83  E-value=1.6e-21  Score=159.79  Aligned_cols=115  Identities=19%  Similarity=0.355  Sum_probs=89.2

Q ss_pred             CCcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccccccc-----ccCCCCCCCCCHHHHHH
Q 024280           75 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD-----RTTNLPHMLPSEEAFAA  147 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~-----~~~~~~~~lp~~~~f~~  147 (269)
                      ...|+++||.++++++  +++|||||         +..+|..||||||+|||+..+..     ....+...+|+.+..+.
T Consensus        15 ~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~   85 (154)
T 1hzm_A           15 AISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDR   85 (154)
T ss_dssp             SSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHH
T ss_pred             ccccCHHHHHHHHhCCCCCEEEEEcC---------CHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHH
Confidence            4579999999988765  78999999         67999999999999999987531     11234566776544333


Q ss_pred             HHHHcCCCCCCcEEEeCCCChHH------HHHHHHHHHHc---CCCcEEEccCcHHHHHhCCCce
Q 024280          148 AVSALGLENKDGLVVYDGKGIFS------AARVWWMFRVF---GHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       148 ~l~~lGI~~d~~VVvY~~~g~~~------A~ra~~~L~~~---G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      + .  +++++++|||||+.|.++      +.+++|+|+.+   ||+ |++|+||+.+|... +|.
T Consensus        86 ~-~--~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~-~p~  145 (154)
T 1hzm_A           86 F-T--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE-FSL  145 (154)
T ss_dssp             H-H--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH-HCS
T ss_pred             H-h--ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH-ChH
Confidence            3 2  357889999999988765      36778899877   999 99999999999875 443

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.83  E-value=2.4e-21  Score=146.74  Aligned_cols=92  Identities=21%  Similarity=0.245  Sum_probs=74.0

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCC
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~  156 (269)
                      .|+++++.+++++ +.+|||||         +..+|..||||||+|+|+.++....                   ..+++
T Consensus         3 ~is~~~l~~~~~~-~~~liDvR---------~~~e~~~ghi~gAi~ip~~~l~~~~-------------------~~l~~   53 (94)
T 1wv9_A            3 KVRPEELPALLEE-GVLVVDVR---------PADRRSTPLPFAAEWVPLEKIQKGE-------------------HGLPR   53 (94)
T ss_dssp             EECGGGHHHHHHT-TCEEEECC---------CC--CCSCCSSCCEECCHHHHTTTC-------------------CCCCS
T ss_pred             cCCHHHHHHHHHC-CCEEEECC---------CHHHHhcccCCCCEECCHHHHHHHH-------------------HhCCC
Confidence            4889999998865 68999999         5789999999999999998764321                   12467


Q ss_pred             CCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCC
Q 024280          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (269)
Q Consensus       157 d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G  200 (269)
                       ++||+||.+|.+ |.++++.|+.+||+ |++|+||+.+|..+|
T Consensus        54 -~~ivvyC~~g~r-s~~a~~~L~~~G~~-v~~l~GG~~~W~~~G   94 (94)
T 1wv9_A           54 -RPLLLVCEKGLL-SQVAALYLEAEGYE-AMSLEGGLQALTQGK   94 (94)
T ss_dssp             -SCEEEECSSSHH-HHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred             -CCEEEEcCCCCh-HHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence             899999999986 88999999999999 999999999998765

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=99.82  E-value=1.5e-20  Score=183.54  Aligned_cols=134  Identities=18%  Similarity=0.164  Sum_probs=108.2

Q ss_pred             CcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc-
Q 024280           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-  152 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l-  152 (269)
                      ..|++++|.++++++  +.+|||||         ...+|..||||||+|||+.++                 .+.++.+ 
T Consensus       265 ~~is~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l-----------------~~~~~~~~  318 (539)
T 1yt8_A          265 ERLDLAGLAQWQDEHDRTTYLLDVR---------TPEEYEAGHLPGSRSTPGGQL-----------------VQETDHVA  318 (539)
T ss_dssp             EEECHHHHHHHHHCTTSCEEEEECS---------CHHHHHHCBCTTCEECCHHHH-----------------HHSHHHHC
T ss_pred             ceECHHHHHHHHhCCCCCeEEEECC---------CHHHHhcCCCCCCEeCCHHHH-----------------HHHHHhhc
Confidence            468999999988653  68999999         689999999999999998653                 2333333 


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccC-cHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCCC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDG-GLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVG  231 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdG-G~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~~  231 (269)
                      |+ ++++|||||++|.+ +..+++.|+.+|| +|++|+| |+.+|..+|+|+++.+..                      
T Consensus       319 ~~-~~~~ivv~c~~g~r-s~~aa~~L~~~G~-~v~~l~G~G~~~w~~~g~p~~~~~~~----------------------  373 (539)
T 1yt8_A          319 SV-RGARLVLVDDDGVR-ANMSASWLAQMGW-QVAVLDGLSEADFSERGAWSAPLPRQ----------------------  373 (539)
T ss_dssp             CS-BTCEEEEECSSSSH-HHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSCCCCCCCC----------------------
T ss_pred             CC-CCCeEEEEeCCCCc-HHHHHHHHHHcCC-eEEEecCCChHHHHHhhccccCCCCC----------------------
Confidence            33 68999999999987 5555566999999 8999999 999999999998775320                      


Q ss_pred             CcccccccCCccccCHHHHHHHhhCCCcEEEccCCCC
Q 024280          232 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKA  268 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~v~~~l~~~~~~iiDaRs~~  268 (269)
                              .....++.+++++.+++++.+|||+|+++
T Consensus       374 --------~~~~~i~~~~l~~~l~~~~~~liDvR~~~  402 (539)
T 1yt8_A          374 --------PRADTIDPTTLADWLGEPGTRVLDFTASA  402 (539)
T ss_dssp             --------CCCCEECHHHHHHHTTSTTEEEEECSCHH
T ss_pred             --------CcCCccCHHHHHHHhcCCCeEEEEeCCHH
Confidence                    11235899999999988889999999864

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=99.81  E-value=1.6e-19  Score=165.54  Aligned_cols=118  Identities=21%  Similarity=0.271  Sum_probs=101.4

Q ss_pred             CCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhh----------------CCCCCCeeccccccccccCCCC
Q 024280           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------------AHIPGALFFDVDGVADRTTNLP  136 (269)
Q Consensus        73 ~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~----------------gHIPGAi~ip~~~l~~~~~~~~  136 (269)
                      ....+|+++++.+++++.  +|||||         ...+|..                ||||||+|||+..+.+.+    
T Consensus       176 ~~~~~i~~~el~~~l~~~--~liDvR---------~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~----  240 (318)
T 3hzu_A          176 DAPIRAFRDDVLAILGAQ--PLIDVR---------SPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADES----  240 (318)
T ss_dssp             CTTTBCCHHHHHHHTTTS--CEEECS---------CHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTT----
T ss_pred             CccccccHHHHHHhhcCC--eEEecC---------CHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCC----
Confidence            455689999999999764  899999         6899988                999999999999876543    


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHH-cCCCcEEEccCcHHHHHh-CCCceecCCC
Q 024280          137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESSAS  208 (269)
Q Consensus       137 ~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~-~G~~nV~vLdGG~~~W~~-~G~pv~~~~~  208 (269)
                      +.+.+.+++.+.+  .+++++++||+||++|.+ |+.++..|+. +||+||++|+|||.+|.. .|+|++++..
T Consensus       241 g~~~~~~~l~~~~--~~l~~~~~ivvyC~sG~r-s~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~  311 (318)
T 3hzu_A          241 GRFRSREELERLY--DFINPDDQTVVYCRIGER-SSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEE  311 (318)
T ss_dssp             SCBCCHHHHHHHT--TTCCTTCCCEEECSSSHH-HHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSSS
T ss_pred             CcCCCHHHHHHHh--cCCCCCCcEEEEcCChHH-HHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCCC
Confidence            3566778888888  578999999999999986 7778888886 999999999999999995 7999999753

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.81  E-value=7.1e-20  Score=145.77  Aligned_cols=108  Identities=17%  Similarity=0.254  Sum_probs=81.0

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccC----------------CCCCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT----------------NLPHML  139 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~----------------~~~~~l  139 (269)
                      ..|++++|.+   +++++|||||         +..+|..||||||+|+|+..+.....                ......
T Consensus         5 ~~i~~~el~~---~~~~~iiDvR---------~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (134)
T 3g5j_A            5 SVIKIEKALK---LDKVIFVDVR---------TEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVS   72 (134)
T ss_dssp             CEECHHHHTT---CTTEEEEECS---------CHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHG
T ss_pred             cccCHHHHHh---cCCcEEEEcC---------CHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhccccccc
Confidence            3589999876   5679999999         68999999999999999975421100                000001


Q ss_pred             CCHHHHHHHHHHcCCCCC-CcEEEeCC-CChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhC
Q 024280          140 PSEEAFAAAVSALGLENK-DGLVVYDG-KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       140 p~~~~f~~~l~~lGI~~d-~~VVvY~~-~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~  199 (269)
                      +..+.|.+.+..  ++++ ++|||||. +|.+ |.+++++|+.+|| ||++|+||+.+|++.
T Consensus        73 ~~~~~~~~~~~~--~~~~~~~ivvyC~~~G~r-s~~a~~~L~~~G~-~v~~l~GG~~~W~~~  130 (134)
T 3g5j_A           73 YKLKDIYLQAAE--LALNYDNIVIYCARGGMR-SGSIVNLLSSLGV-NVYQLEGGYKAYRNF  130 (134)
T ss_dssp             GGHHHHHHHHHH--HHTTCSEEEEECSSSSHH-HHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred             ccHHHHHHHHHH--hccCCCeEEEEECCCChH-HHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence            222355555555  3677 89999995 6765 8899999999999 999999999999874

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.80  E-value=2.8e-20  Score=138.20  Aligned_cols=84  Identities=18%  Similarity=0.211  Sum_probs=72.7

Q ss_pred             CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCChHH
Q 024280           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFS  170 (269)
Q Consensus        91 ~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~  170 (269)
                      +++|||+|         +..+|..||||||+|+|+..                 |.+.+..++++++++||+||.+|.+ 
T Consensus         1 ~~~liDvR---------~~~e~~~ghIpgA~~ip~~~-----------------l~~~~~~l~~~~~~~ivv~C~~g~r-   53 (85)
T 2jtq_A            1 AEHWIDVR---------VPEQYQQEHVQGAINIPLKE-----------------VKERIATAVPDKNDTVKVYCNAGRQ-   53 (85)
T ss_dssp             CEEEEECS---------CHHHHTTEEETTCEECCHHH-----------------HHHHHHHHCCCTTSEEEEEESSSHH-
T ss_pred             CCEEEECC---------CHHHHHhCCCCCCEEcCHHH-----------------HHHHHHHhCCCCCCcEEEEcCCCch-
Confidence            46899999         68999999999999999754                 5667788888999999999999875 


Q ss_pred             HHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          171 AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       171 A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                      |.++++.|+.+||++|++| ||+.+|.   .|+++
T Consensus        54 s~~aa~~L~~~G~~~v~~l-GG~~~w~---~~~~~   84 (85)
T 2jtq_A           54 SGQAKEILSEMGYTHVENA-GGLKDIA---MPKVK   84 (85)
T ss_dssp             HHHHHHHHHHTTCSSEEEE-EETTTCC---SCEEE
T ss_pred             HHHHHHHHHHcCCCCEEec-cCHHHHh---ccccc
Confidence            8899999999999999999 9988774   56554

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.80  E-value=5.2e-20  Score=150.89  Aligned_cols=121  Identities=19%  Similarity=0.284  Sum_probs=87.7

Q ss_pred             CcccHHHHHHhhCC--CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccccccccc-CCCCCCCCCHHHH--HHHHH
Q 024280           76 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT-TNLPHMLPSEEAF--AAAVS  150 (269)
Q Consensus        76 ~lIs~~eL~~~l~~--~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~-~~~~~~lp~~~~f--~~~l~  150 (269)
                      +-|+++||.+++++  ++++|||||         +..+|..||||||+|||+..+.... ..  +.++ .+.+  .+...
T Consensus         4 ~~Is~~~l~~~l~~~~~~~~iiDvR---------~~~ey~~gHIpgAinip~~~l~~~~~~~--~~~~-~~~ll~~~~~~   71 (153)
T 2vsw_A            4 TQIVTERLVALLESGTEKVLLIDSR---------PFVEYNTSHILEAININCSKLMKRRLQQ--DKVL-ITELIQHSAKH   71 (153)
T ss_dssp             EEECHHHHHHHHTSTTCCEEEEECS---------CHHHHHHCEETTCEECCCCHHHHHHHHT--TSSC-HHHHHHHSCSS
T ss_pred             ccccHHHHHHHHhcCCCCEEEEECC---------CHHHhccCccCCCeeeChHHHHHhhhhc--CCcC-HHHhcCchhhh
Confidence            45899999999973  578999999         6899999999999999998752210 00  1111 1111  11223


Q ss_pred             HcCCCCCCcEEEeCCCChHHHHH-----HHHHHHHc--CCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          151 ALGLENKDGLVVYDGKGIFSAAR-----VWWMFRVF--GHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       151 ~lGI~~d~~VVvY~~~g~~~A~r-----a~~~L~~~--G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      .++++++++|||||+.|.+++..     ++++|+.+  ||++|++|+||+.+|...+.++.++.+
T Consensus        72 ~~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~~  136 (153)
T 2vsw_A           72 KVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGKS  136 (153)
T ss_dssp             CCCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC--
T ss_pred             hhccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCCC
Confidence            45788999999999988764322     26777755  999999999999999998777777643

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=99.80  E-value=3.5e-19  Score=155.43  Aligned_cols=103  Identities=21%  Similarity=0.321  Sum_probs=88.9

Q ss_pred             CCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhh----------CCCCCCeeccccccccccCCCCCCCCCH
Q 024280           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------AHIPGALFFDVDGVADRTTNLPHMLPSE  142 (269)
Q Consensus        73 ~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~----------gHIPGAi~ip~~~l~~~~~~~~~~lp~~  142 (269)
                      ....+|+++++.+     +.+|||+|         ...+|..          ||||||+|+|+..+.+.+          
T Consensus       118 ~~~~~i~~~e~~~-----~~~liDvR---------~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~----------  173 (230)
T 2eg4_A          118 RRDWLLTADEAAR-----HPLLLDVR---------SPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE----------  173 (230)
T ss_dssp             CGGGBCCHHHHHT-----CSCEEECS---------CHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT----------
T ss_pred             CccceeCHHHHhh-----CCeEEeCC---------CHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH----------
Confidence            3457899999987     57899999         6899998          999999999999875421          


Q ss_pred             HHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       143 ~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                          +.+...+++++++||+||++|.+ |+.+++.|+.+| .||++|+||+.+|...|+|+++
T Consensus       174 ----e~~~~~~~~~~~~iv~~C~~G~r-s~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~  230 (230)
T 2eg4_A          174 ----GLLERLGLQPGQEVGVYCHSGAR-SAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP  230 (230)
T ss_dssp             ----THHHHHTCCTTCEEEEECSSSHH-HHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred             ----HHHHhcCCCCCCCEEEEcCChHH-HHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence                14556689999999999999986 888999999999 9999999999999999999864

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.79  E-value=1.1e-19  Score=145.87  Aligned_cols=117  Identities=20%  Similarity=0.282  Sum_probs=78.9

Q ss_pred             cccHHHHHH--------hhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH
Q 024280           77 VVSVDWLHA--------NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (269)
Q Consensus        77 lIs~~eL~~--------~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~  148 (269)
                      +|+++||++        ++++++++|||||         +..+|..||||||+|+|+..+..........++    +...
T Consensus         2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~----~~~~   68 (142)
T 2ouc_A            2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQQGKIT----VLDL   68 (142)
T ss_dssp             EECHHHHHHHHHC----------CEEEECS---------CHHHHHHEEETTCEECCCSSHHHHHHHHTTSSC----HHHH
T ss_pred             ccCHHHHHHHHHhcccccCCCCCCEEEEeC---------CHHHhhhhhccCccccCccHHHHHHHhhcCCcc----hhhh
Confidence            689999999        6666679999999         689999999999999999875321000000111    2222


Q ss_pred             HHHcCCC------CCCcEEEeCCCChHHH--------HHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCC
Q 024280          149 VSALGLE------NKDGLVVYDGKGIFSA--------ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (269)
Q Consensus       149 l~~lGI~------~d~~VVvY~~~g~~~A--------~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~  207 (269)
                      +...+..      ++++|||||+.|.+++        ..+...|+..|| +|++|+||+.+|..+|+++.++.
T Consensus        69 ~~~~~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~  140 (142)
T 2ouc_A           69 ISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS  140 (142)
T ss_dssp             HHTTSCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred             CCChhhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence            2211111      3688999999887531        223345688999 99999999999999999988754

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.77  E-value=4.2e-19  Score=142.97  Aligned_cols=110  Identities=14%  Similarity=0.098  Sum_probs=88.7

Q ss_pred             CcccHHHHHHhhC-CCCcEEEEeccCCCCCCCCCHhhHhhCCC-------CCCeeccccccccccCCCCCCCCCHHHHHH
Q 024280           76 PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHI-------PGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (269)
Q Consensus        76 ~lIs~~eL~~~l~-~~~~vIIDvR~~~~~~~~~~~~ey~~gHI-------PGAi~ip~~~l~~~~~~~~~~lp~~~~f~~  147 (269)
                      ..|+++++.++++ +++.+|||||         ...||..+|+       |||+|||+..+.            ...|.+
T Consensus         5 ~~is~~e~~~~l~~~~~~~liDVR---------~~~E~~~~~~~~~~g~~~ga~~ip~~~~~------------~~~~~~   63 (134)
T 1vee_A            5 SSGSAKNAYTKLGTDDNAQLLDIR---------ATADFRQVGSPNIKGLGKKAVSTVYNGED------------KPGFLK   63 (134)
T ss_dssp             CBCCHHHHHHHHHHCTTEEEEECS---------CHHHHHHTCEECCTTTSCCCEECCCCGGG------------HHHHHH
T ss_pred             CccCHHHHHHHHHhCCCeEEEEcC---------CHHHHhhcCCCcccccCCceEEeeccccc------------ChhHHH
Confidence            3599999999886 5678999999         6899986333       799999986531            223444


Q ss_pred             HHHHcC-CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcH---HHHHhCCCceecCC
Q 024280          148 AVSALG-LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL---PRWRASGYDVESSA  207 (269)
Q Consensus       148 ~l~~lG-I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~---~~W~~~G~pv~~~~  207 (269)
                      .+.... ++++++|||||.+|.+ |..++..|+.+||+||+.|.||+   .+|+++|+|++...
T Consensus        64 ~l~~~~~~~~~~~ivv~C~sG~R-S~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~  126 (134)
T 1vee_A           64 KLSLKFKDPENTTLYILDKFDGN-SELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPK  126 (134)
T ss_dssp             HHHTTCSCGGGCEEEEECSSSTT-HHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCC
T ss_pred             HHHHHhCCCCCCEEEEEeCCCCc-HHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCC
Confidence            454433 3789999999999987 78888999999999999999999   78999999998764

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.77  E-value=1.4e-18  Score=150.59  Aligned_cols=106  Identities=14%  Similarity=0.133  Sum_probs=86.2

Q ss_pred             CCcccHHHHHHhhCCC------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH
Q 024280           75 EPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~  148 (269)
                      ...|++++|.++++++      +++|||||         +..+|..||||||+|||+..+..                ..
T Consensus        43 ~~~Is~~el~~~l~~~~~~~~~~~~lIDvR---------~~~Ey~~gHIpGAinip~~~l~~----------------~~   97 (211)
T 1qb0_A           43 LKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAE----------------SF   97 (211)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------HH
T ss_pred             CCeeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHccCcCCCCEECCchHHHH----------------Hh
Confidence            4679999999999763      68999999         68999999999999999876421                12


Q ss_pred             HH---HcCCCCCCcE--EEeCC-CChHHHHHHHHHHHH----------cCCCcEEEccCcHHHHHhCCCceecC
Q 024280          149 VS---ALGLENKDGL--VVYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVESS  206 (269)
Q Consensus       149 l~---~lGI~~d~~V--VvY~~-~g~~~A~ra~~~L~~----------~G~~nV~vLdGG~~~W~~~G~pv~~~  206 (269)
                      +.   .++++++++|  |+||+ +|.+ +.++++.|+.          +||++|++|+||+.+|.++|.|+...
T Consensus        98 ~~~~~~l~~~~d~~ivvVvyC~~sG~r-s~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~  170 (211)
T 1qb0_A           98 LLKSPIAPCSLDKRVILIFHCEFSSER-GPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP  170 (211)
T ss_dssp             HHTTTCCCSSTTSEEEEEEECSSSSSH-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred             hhhhhhccccCCCCeEEEEECCCCCcc-HHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence            22   2344578887  88999 8876 7778888875          79999999999999999999988664

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.76  E-value=1.5e-18  Score=145.42  Aligned_cols=106  Identities=14%  Similarity=0.151  Sum_probs=81.6

Q ss_pred             CCcccHHHHHHhhCC------CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH
Q 024280           75 EPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~------~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~  148 (269)
                      ...|++++|.+++++      ++++|||||         +..+|..||||||+|||+..+..                .+
T Consensus        23 ~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~----------------~~   77 (175)
T 2a2k_A           23 LKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAE----------------SF   77 (175)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------HH
T ss_pred             CceeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHcCCcCCCcEECChhHHHH----------------Hh
Confidence            457999999999976      368999999         68999999999999999876422                11


Q ss_pred             HHH---cCCCCCCcEEE--eCC-CChHHHHHHHHHHHH----------cCCCcEEEccCcHHHHHhCCCceecC
Q 024280          149 VSA---LGLENKDGLVV--YDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVESS  206 (269)
Q Consensus       149 l~~---lGI~~d~~VVv--Y~~-~g~~~A~ra~~~L~~----------~G~~nV~vLdGG~~~W~~~G~pv~~~  206 (269)
                      +..   ++++++++|||  ||+ +|.+ +.++++.|+.          +||+||++|+||+.+|.++|.|+...
T Consensus        78 ~~~~~~~~~~~~~~ivvv~yC~~~g~r-s~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~  150 (175)
T 2a2k_A           78 LLKSPIAPCSLDKRVILIFHSEFSSER-GPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP  150 (175)
T ss_dssp             HHSSCCCC----CEEEEEEECSSSSSH-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred             hhhhhhccccCCCCeEEEEECCCCCCc-cHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCC
Confidence            221   23447788744  698 7776 7778888874          59999999999999999999988654

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.76  E-value=1.8e-18  Score=155.01  Aligned_cols=103  Identities=18%  Similarity=0.300  Sum_probs=87.6

Q ss_pred             CCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHH-HHc
Q 024280           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV-SAL  152 (269)
Q Consensus        74 ~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l-~~l  152 (269)
                      ....|+++++.+++++++++|||||         ...+|..||||||+|+|+..+..              +.+++ ..+
T Consensus       120 ~~~~Is~~el~~ll~~~~~vlIDVR---------~~~Ey~~GHIpGAiniP~~~~~~--------------~~~~l~~~l  176 (265)
T 4f67_A          120 AGTYLSPEEWHQFIQDPNVILLDTR---------NDYEYELGTFKNAINPDIENFRE--------------FPDYVQRNL  176 (265)
T ss_dssp             TTCEECHHHHHHHTTCTTSEEEECS---------CHHHHHHEEETTCBCCCCSSGGG--------------HHHHHHHHT
T ss_pred             CCceECHHHHHHHhcCCCeEEEEeC---------CchHhhcCcCCCCEeCCHHHHHh--------------hHHHHHHhh
Confidence            3568999999999988889999999         68999999999999999887642              22222 244


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G  200 (269)
                      +.+++++||+||.+|.+ +.++++.|+..||+||++|+||+.+|.++.
T Consensus       177 ~~~kdk~IVvyC~~G~R-S~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~  223 (265)
T 4f67_A          177 IDKKDKKIAMFCTGGIR-CEKTTAYMKELGFEHVYQLHDGILNYLESI  223 (265)
T ss_dssp             GGGTTSCEEEECSSSHH-HHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred             hhCCCCeEEEEeCCChH-HHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence            55789999999999886 788899999999999999999999999864

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.75  E-value=1.6e-18  Score=142.64  Aligned_cols=107  Identities=19%  Similarity=0.160  Sum_probs=80.2

Q ss_pred             CcccHHHHHHhhCCC----CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           76 PVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~----~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      ..|++++|.++++++    +++|||||         +. +|..||||||+|||+..+...         ..+.+.+.+..
T Consensus         5 ~~Is~~el~~~l~~~~~~~~~~lIDvR---------~~-ey~~gHIpGAinip~~~l~~~---------~~~~l~~~l~~   65 (152)
T 2j6p_A            5 TYIKPEELVELLDNPDSLVKAAVIDCR---------DS-DRDCGFIVNSINMPTISCTEE---------MYEKLAKTLFE   65 (152)
T ss_dssp             EEECHHHHHHHHHSHHHHHTEEEEECC---------ST-TGGGCBCTTCEECCTTTCCHH---------HHHHHHHHHHH
T ss_pred             CccCHHHHHHHHhCCCCCCCEEEEEcC---------cH-HhCcCcCCCcEECChhHhhHH---------HHHHHHHHhcc
Confidence            469999999998763    78999999         45 899999999999998865321         01234444443


Q ss_pred             cCCCCCCcEEEeC-CCChHHHHHHH----HHHHHcCC--CcEEEccCcHHHHHhCCCceec
Q 024280          152 LGLENKDGLVVYD-GKGIFSAARVW----WMFRVFGH--DRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       152 lGI~~d~~VVvY~-~~g~~~A~ra~----~~L~~~G~--~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                         .+.+.||+|| .+|.+ +.+++    +.|+.+||  ++|++|+||+.+|..+|.++..
T Consensus        66 ---~~~~~vV~yC~~sg~r-s~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~  122 (152)
T 2j6p_A           66 ---EKKELAVFHCAQSLVR-APKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP  122 (152)
T ss_dssp             ---TTCCEEEEECSSSSSH-HHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred             ---cCCCEEEEEcCCCCCc-cHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence               2344678889 57765 44444    67788897  5999999999999999987654

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.75  E-value=1.7e-18  Score=143.15  Aligned_cols=107  Identities=15%  Similarity=0.169  Sum_probs=83.8

Q ss_pred             CCcccHHHHHHhhCC------CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH
Q 024280           75 EPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~------~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~  148 (269)
                      ...|++++|.+++++      ++++|||||         +..+|..||||||+|||+..+...                .
T Consensus        22 ~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~~~~~----------------~   76 (161)
T 1c25_A           22 LKYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEEVED----------------F   76 (161)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHHH----------------H
T ss_pred             cceeCHHHHHHHHhccccccCCCeEEEECC---------ChHHccCCcccCcEeCChhHHHHH----------------H
Confidence            357999999999976      368999999         689999999999999998764321                1


Q ss_pred             HHHcC--CCCCCcE--EEeCC-CChHHHHHHHHHHHH----------cCCCcEEEccCcHHHHHhCCCceecCC
Q 024280          149 VSALG--LENKDGL--VVYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVESSA  207 (269)
Q Consensus       149 l~~lG--I~~d~~V--VvY~~-~g~~~A~ra~~~L~~----------~G~~nV~vLdGG~~~W~~~G~pv~~~~  207 (269)
                      +...+  .+++++|  |+||. +|.+ +..++..|+.          +||+||++|+||+.+|..++.|+....
T Consensus        77 ~~~~~~~~~~~~~ivvv~yC~~sg~r-s~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~  149 (161)
T 1c25_A           77 LLKKPIVPTDGKRVIVVFHCEFSSER-GPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP  149 (161)
T ss_dssp             TTTSCCCCCTTSEEEEEEECSSSSSH-HHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred             HhhhhhccCCCCCeEEEEEcCCCCcc-hHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence            11111  2467775  68999 7776 6677777764          599999999999999999999988753

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=99.75  E-value=2.1e-18  Score=165.40  Aligned_cols=101  Identities=26%  Similarity=0.395  Sum_probs=89.6

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|+++++.+++++++.+|||+|         +..+|..||||||+|+|+..+...                 +.  +++
T Consensus       374 ~~i~~~~l~~~~~~~~~~lvDvR---------~~~e~~~ghIpgA~~ip~~~l~~~-----------------~~--~l~  425 (474)
T 3tp9_A          374 ANVSPDEVRGALAQQGLWLLDVR---------NVDEWAGGHLPQAHHIPLSKLAAH-----------------IH--DVP  425 (474)
T ss_dssp             EEECHHHHHHTTTTTCCEEEECS---------CHHHHHHCBCTTCEECCHHHHTTT-----------------GG--GSC
T ss_pred             cccCHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHHH-----------------Hh--cCC
Confidence            56999999999987789999999         689999999999999998875432                 11  367


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                      ++++||+||++|.+ |+.+++.|+.+||+||++|+||+.+|.++|+|+++
T Consensus       426 ~~~~vvv~C~~G~r-a~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~  474 (474)
T 3tp9_A          426 RDGSVCVYCRTGGR-SAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA  474 (474)
T ss_dssp             SSSCEEEECSSSHH-HHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred             CCCEEEEECCCCHH-HHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence            89999999999986 88899999999999999999999999999999874

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.74  E-value=5.3e-19  Score=148.39  Aligned_cols=129  Identities=17%  Similarity=0.179  Sum_probs=81.5

Q ss_pred             ccCCCCCcccCCCCCC-CCcccHHHHHHhhCCC-------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccccccc
Q 024280           59 AAGRRADYSTLSVSPK-EPVVSVDWLHANLREP-------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD  130 (269)
Q Consensus        59 ~~~~~~~~~~~~~~~~-~~lIs~~eL~~~l~~~-------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~  130 (269)
                      +....-.+.+...... -..|++++|.++++++       +++|||||         . .+|..||||||+|||+..+..
T Consensus        13 ~~~~~~~~~m~~~~~~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR---------~-~Ey~~GHIpGAiniP~~~l~~   82 (169)
T 3f4a_A           13 GRENLYFQGMDSYSITNVKYLDPTELHRWMQEGHTTTLREPFQVVDVR---------G-SDYMGGHIKDGWHYAYSRLKQ   82 (169)
T ss_dssp             -------------CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEECC---------S-TTCTTCEETTCEECCHHHHHH
T ss_pred             cccchhhccchhcccCCCcEeCHHHHHHHHhcCCccCcCCCEEEEECC---------c-hHHccCcCCCCEECCHHHhhc
Confidence            3344444444444332 3479999999998643       48999999         5 789999999999999987643


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHcCCC--CCCcEEEeCCCC-hHHHHHHH-HHHHHc---C--CCcEEEccCcHHHHHhCCC
Q 024280          131 RTTNLPHMLPSEEAFAAAVSALGLE--NKDGLVVYDGKG-IFSAARVW-WMFRVF---G--HDRVWVLDGGLPRWRASGY  201 (269)
Q Consensus       131 ~~~~~~~~lp~~~~f~~~l~~lGI~--~d~~VVvY~~~g-~~~A~ra~-~~L~~~---G--~~nV~vLdGG~~~W~~~G~  201 (269)
                      ..       +..+++.+.+...+++  ++++|||||.+| .+ +.+++ |+++.+   |  +.+|++|+||+.+|..++.
T Consensus        83 ~~-------~~l~~l~~~~~~~~~~~~~~~~IVvyC~sG~~R-s~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~  154 (169)
T 3f4a_A           83 DP-------EYLRELKHRLLEKQADGRGALNVIFHCMLSQQR-GPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYG  154 (169)
T ss_dssp             CH-------HHHHHHHHHHHHHHHTSSSCEEEEEECSSSSSH-HHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHT
T ss_pred             cc-------ccHHHHHHHHHhhcccccCCCeEEEEeCCCCCc-HHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcC
Confidence            20       1122333333333332  247999999987 54 44444 555543   4  6799999999999999887


Q ss_pred             ceec
Q 024280          202 DVES  205 (269)
Q Consensus       202 pv~~  205 (269)
                      |.+.
T Consensus       155 ~~~~  158 (169)
T 3f4a_A          155 DDES  158 (169)
T ss_dssp             TCTT
T ss_pred             Cccc
Confidence            6554

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=99.73  E-value=4.3e-18  Score=140.66  Aligned_cols=120  Identities=18%  Similarity=0.248  Sum_probs=85.4

Q ss_pred             CCcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccC--CCCCCCCCHHHHHHHHH
Q 024280           75 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--NLPHMLPSEEAFAAAVS  150 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~--~~~~~lp~~~~f~~~l~  150 (269)
                      ...|+++||.++++++  +++|||||         +..+|..||||||+|||+..+.....  .+...+|..  ..+.+.
T Consensus        14 ~~~i~~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~--~~~~~~   82 (157)
T 1whb_A           14 KGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDD--SKDTWK   82 (157)
T ss_dssp             CSEECHHHHHHHHTCSSSCEEEEEES---------CHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTT--HHHHHH
T ss_pred             CCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChH--HHHHHH
Confidence            4579999999999876  79999999         68999999999999999876532110  111234432  234445


Q ss_pred             HcCCCCCCcEEEeCCCChH---HHHHHHHHHHH----c----CCC-cEEEccCcHHHHHhCCCceecCCC
Q 024280          151 ALGLENKDGLVVYDGKGIF---SAARVWWMFRV----F----GHD-RVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       151 ~lGI~~d~~VVvY~~~g~~---~A~ra~~~L~~----~----G~~-nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      ..+  +.+.|||||..+..   .+++++|.|..    +    |+. +|++|+||+.+|... +|+....+
T Consensus        83 ~~~--~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~  149 (157)
T 1whb_A           83 KRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNA  149 (157)
T ss_dssp             GGG--TSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCC
T ss_pred             hcC--CCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCC
Confidence            443  45569999987643   34667777762    2    454 499999999999985 88877543

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.71  E-value=1.2e-17  Score=145.62  Aligned_cols=105  Identities=17%  Similarity=0.126  Sum_probs=78.6

Q ss_pred             CCcccHHHHHHhhCCC------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHH
Q 024280           75 EPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~  148 (269)
                      -..|++++|.++++++      +++|||||         .+.||..||||||+|||+.+                .+.+.
T Consensus        56 ~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR---------~~~Ey~~GHIpGAinIP~~~----------------~l~~~  110 (216)
T 3op3_A           56 LKYVNPETVAALLSGKFQGLIEKFYVIDCR---------YPYEYLGGHIQGALNLYSQE----------------ELFNF  110 (216)
T ss_dssp             SEEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTSEETTCEECCSHH----------------HHHHH
T ss_pred             CCEeCHHHHHHHHhCCCccccCCEEEEEeC---------cHHHHhcCCccCCEECChHH----------------HHHHH
Confidence            3569999999999865      68999999         68999999999999999764                12233


Q ss_pred             HHHcCC---CCCC--cEEEeCC-CChHHHHHHHHHHHHc----------CCCcEEEccCcHHHHHhCCCceec
Q 024280          149 VSALGL---ENKD--GLVVYDG-KGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       149 l~~lGI---~~d~--~VVvY~~-~g~~~A~ra~~~L~~~----------G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                      +...++   ++++  .|||||. +|.+ +..++..|+..          ||++|++|+||+.+|..+...+-.
T Consensus       111 l~~~~~~~~~~~k~~~VVvyC~~SG~R-s~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce  182 (216)
T 3op3_A          111 FLKKPIVPLDTQKRIIIVFHCEFSSER-GPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE  182 (216)
T ss_dssp             HTSSCCCCSSTTSEEEEEEECCC--CC-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             HhhccccccccCCCCEEEEEeCCCChH-HHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence            322222   2333  4999999 8876 66777777765          999999999999999987554443

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=99.70  E-value=2.2e-17  Score=152.23  Aligned_cols=114  Identities=18%  Similarity=0.321  Sum_probs=89.5

Q ss_pred             CCcccHHHHHHhhCCC----CcEEEEeccCCCCCCCCCHhhHh-----------hCCCCCCeeccccccccccCCCCCCC
Q 024280           75 EPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHML  139 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~----~~vIIDvR~~~~~~~~~~~~ey~-----------~gHIPGAi~ip~~~l~~~~~~~~~~l  139 (269)
                      ..+++.+++.+.+++.    +.+|||+|         ..++|.           .||||||+|+|+.++.+.+..   .+
T Consensus       183 ~~v~~~~~v~~~v~~~~~~~~~~lvDaR---------s~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~---~~  250 (327)
T 3utn_X          183 KEIVDYEEMFQLVKSGELAKKFNAFDAR---------SLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETK---TY  250 (327)
T ss_dssp             HHEECHHHHHHHHHTTCHHHHCEEEECS---------CHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTC---CC
T ss_pred             hheecHHHHhhhhhcccccccceeeccC---------ccceecccccCccccccCCCCCCCcccChhhccCCCCC---CC
Confidence            3478999998888653    46899999         456664           599999999999997765542   23


Q ss_pred             C-CHHH----HHHHHHH--cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCC
Q 024280          140 P-SEEA----FAAAVSA--LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  201 (269)
Q Consensus       140 p-~~~~----f~~~l~~--lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~  201 (269)
                      + ..+.    |++.+..  .|++++++||+||++|.+ |+-+++.|+.+|+++|++|||+|.+|.....
T Consensus       251 ~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvt-A~~~~laL~~lG~~~v~lYdGSWsEW~~r~~  318 (327)
T 3utn_X          251 PEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVS-GVIIKTALELAGVPNVRLYDGSWTEWVLKSG  318 (327)
T ss_dssp             CCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHH-HHHHHHHHHHTTCCSEEEESSHHHHHHHHHC
T ss_pred             CCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHH-HHHHHHHHHHcCCCCceeCCCcHHHhccccC
Confidence            3 3333    4444443  389999999999999986 8889999999999999999999999987543

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=99.70  E-value=1.5e-17  Score=155.84  Aligned_cols=105  Identities=18%  Similarity=0.217  Sum_probs=87.2

Q ss_pred             CCCcEEEEeccCCCCCCCCCHhhHh-----------hCCCCCCeeccccccc--cccCCCCCC-CCCHHHHHHHHHHc--
Q 024280           89 EPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVA--DRTTNLPHM-LPSEEAFAAAVSAL--  152 (269)
Q Consensus        89 ~~~~vIIDvR~~~~~~~~~~~~ey~-----------~gHIPGAi~ip~~~l~--~~~~~~~~~-lp~~~~f~~~l~~l--  152 (269)
                      +++.+|||+|         ...+|.           .||||||+|||+.++.  +.+    +. +.+.+++++.+..+  
T Consensus       172 ~~~~~lIDvR---------~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~----~~~~~~~~~l~~~~~~~~~  238 (373)
T 1okg_A          172 PPQAIITDAR---------SADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGD----GKVLRSEEEIRHNIMTVVQ  238 (373)
T ss_dssp             CTTCCEEECS---------CHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSS----SCEECCHHHHHHHHHTTCC
T ss_pred             ccCceEEeCC---------CHHHccccccccccCCcCccCCCcEEecHHHhhccCCC----CCccCCHHHHHHHHHhhhc
Confidence            4568899999         689999           9999999999999875  322    23 56788999999988  


Q ss_pred             CCCC---CCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh-CCCceecCC
Q 024280          153 GLEN---KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (269)
Q Consensus       153 GI~~---d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~-~G~pv~~~~  207 (269)
                      |+++   +++||+||++|.+ |+.+++.|+.+||+||++|+|||.+|.. .|+|++++.
T Consensus       239 gi~~~~~d~~ivvyC~sG~r-s~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~  296 (373)
T 1okg_A          239 GAGDAADLSSFVFSCGSGVT-ACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRSI  296 (373)
T ss_dssp             -----CCCTTSEEECSSSST-HHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHHH
T ss_pred             CCCcccCCCCEEEECCchHH-HHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccCC
Confidence            8898   9999999999987 7788899999999999999999999997 689987653

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=99.69  E-value=9.2e-18  Score=138.95  Aligned_cols=119  Identities=18%  Similarity=0.239  Sum_probs=83.3

Q ss_pred             CCcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccC--CCCCCCCCHHHHHHHHH
Q 024280           75 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--NLPHMLPSEEAFAAAVS  150 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~--~~~~~lp~~~~f~~~l~  150 (269)
                      ...|+++||.++++++  +++|||||         +..+|..||||||+|||+..+.....  .+...+|.  ...+.+.
T Consensus        19 ~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~--~~~~l~~   87 (157)
T 2gwf_A           19 SGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPD--DSKDTWK   87 (157)
T ss_dssp             CCEECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCH--HHHHHHH
T ss_pred             CCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCH--HHHHHHH
Confidence            3579999999998766  79999999         68999999999999999886532110  11123442  2234455


Q ss_pred             HcCCCCCCcEEEeCCCChH---HHHHHHHHHH----Hc----CCC-cEEEccCcHHHHHhCCCceecCC
Q 024280          151 ALGLENKDGLVVYDGKGIF---SAARVWWMFR----VF----GHD-RVWVLDGGLPRWRASGYDVESSA  207 (269)
Q Consensus       151 ~lGI~~d~~VVvY~~~g~~---~A~ra~~~L~----~~----G~~-nV~vLdGG~~~W~~~G~pv~~~~  207 (269)
                      ..+  +.+.|||||..+..   .+++++|.|.    .+    |+. +|++|+||+.+|... +|+....
T Consensus        88 ~~~--~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~  153 (157)
T 2gwf_A           88 KRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN  153 (157)
T ss_dssp             TTT--TSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBSC
T ss_pred             hcC--CCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcCC
Confidence            443  45669999987643   2455667665    22    344 499999999999984 8876643

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.69  E-value=6.8e-17  Score=133.50  Aligned_cols=111  Identities=19%  Similarity=0.326  Sum_probs=77.9

Q ss_pred             CCcccHHHHHHhhC--------CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccccccc----ccCCCC--CCCC
Q 024280           75 EPVVSVDWLHANLR--------EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD----RTTNLP--HMLP  140 (269)
Q Consensus        75 ~~lIs~~eL~~~l~--------~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~----~~~~~~--~~lp  140 (269)
                      ..+|+++||.++++        +++++|||||         ...+|..||||||+|+|+..+..    .....+  ..++
T Consensus        10 ~~~is~~el~~~l~~~~~~~~~~~~~~liDvR---------~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~   80 (158)
T 3tg1_B           10 IKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLIS   80 (158)
T ss_dssp             -CEECHHHHHHHHCC----------CEEEECS---------CHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTC
T ss_pred             CcEecHHHHHHHHHhcccccCCCCCEEEEEcC---------CHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcC
Confidence            35799999999997        3468999999         68999999999999999987531    010110  0011


Q ss_pred             CHHHHHHHHHHcCCCCCCcEEEeCCCChH--------HHHHHHHHHHHcCCCcEEEccCcHHHHHhC
Q 024280          141 SEEAFAAAVSALGLENKDGLVVYDGKGIF--------SAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       141 ~~~~f~~~l~~lGI~~d~~VVvY~~~g~~--------~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~  199 (269)
                      ..+. .   ..+...++++|||||.+|.+        .+..+++.|+..|| +|++|+||+.+|.+.
T Consensus        81 ~~~~-~---~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~  142 (158)
T 3tg1_B           81 CREG-K---DSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN  142 (158)
T ss_dssp             CCCS-S---CSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred             CHHH-H---HHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence            0000 0   01111357899999998842        47888899999999 699999999999864

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.61  E-value=4.9e-16  Score=150.95  Aligned_cols=91  Identities=21%  Similarity=0.301  Sum_probs=76.0

Q ss_pred             ccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCC
Q 024280           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  157 (269)
Q Consensus        78 Is~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d  157 (269)
                      |++++|.++  +++.+|||||         ...||..||||||+|+|++.+....                 ..  ++++
T Consensus       475 i~~~~~~~~--~~~~~~iDvR---------~~~e~~~~~i~ga~~ip~~~l~~~~-----------------~~--~~~~  524 (565)
T 3ntd_A          475 IHFDQIDNL--SEDQLLLDVR---------NPGELQNGGLEGAVNIPVDELRDRM-----------------HE--LPKD  524 (565)
T ss_dssp             ECTTTTTSC--CTTEEEEECS---------CGGGGGGCCCTTCEECCGGGTTTSG-----------------GG--SCTT
T ss_pred             eeHHHHHhC--CCCcEEEEeC---------CHHHHhcCCCCCcEECCHHHHHHHH-----------------hh--cCCc
Confidence            566666555  4568999999         6899999999999999998764321                 11  4788


Q ss_pred             CcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCC
Q 024280          158 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (269)
Q Consensus       158 ~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G  200 (269)
                      ++||+||.+|.+ |.++++.|+.+|| ||++|+||+.+|+++|
T Consensus       525 ~~iv~~c~~g~r-s~~a~~~l~~~G~-~v~~l~gG~~~w~~~g  565 (565)
T 3ntd_A          525 KEIIIFSQVGLR-GNVAYRQLVNNGY-RARNLIGGYRTYKFAS  565 (565)
T ss_dssp             SEEEEECSSSHH-HHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred             CeEEEEeCCchH-HHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence            999999999876 8899999999999 9999999999999876

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.56  E-value=2.1e-15  Score=147.72  Aligned_cols=94  Identities=16%  Similarity=0.151  Sum_probs=79.5

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|++++|.++++ ++.+|||||         ...+|..||||||+|+|++.+...                 +..  ++
T Consensus       489 ~~i~~~~~~~~~~-~~~~~iDvR---------~~~e~~~ghi~ga~~ip~~~l~~~-----------------~~~--l~  539 (588)
T 3ics_A          489 DTVQWHEIDRIVE-NGGYLIDVR---------EPNELKQGMIKGSINIPLDELRDR-----------------LEE--VP  539 (588)
T ss_dssp             CEECTTTHHHHHH-TTCEEEECS---------CGGGGGGCBCTTEEECCHHHHTTC-----------------GGG--SC
T ss_pred             ceecHHHHHHHhc-CCCEEEEcC---------CHHHHhcCCCCCCEECCHHHHHHH-----------------Hhh--CC
Confidence            4688999998885 458999999         689999999999999998775432                 112  47


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G  200 (269)
                      ++++||+||.+|.+ |.++++.|+.+||+ |++|+||+.+|++..
T Consensus       540 ~~~~iv~~C~~g~r-s~~a~~~l~~~G~~-v~~l~GG~~~w~~~~  582 (588)
T 3ics_A          540 VDKDIYITCQLGMR-GYVAARMLMEKGYK-VKNVDGGFKLYGTVL  582 (588)
T ss_dssp             SSSCEEEECSSSHH-HHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred             CCCeEEEECCCCcH-HHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence            88999999998875 78999999999999 999999999998753

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.55  E-value=7e-15  Score=141.07  Aligned_cols=75  Identities=13%  Similarity=0.147  Sum_probs=63.4

Q ss_pred             CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEeCCCChH
Q 024280           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIF  169 (269)
Q Consensus        90 ~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVvY~~~g~~  169 (269)
                      ++++|||+|         +..+|..||||||+|+|+..                .|+.+++.+ ++++++|||||+ +. 
T Consensus       295 ~~~~ilD~R---------~~~~y~~gHIpGAv~ip~~~----------------~~~~~~~~~-~~~~~~vvly~~-~~-  346 (466)
T 3r2u_A          295 TNRLTFDLR---------SKEAYHGGHIEGTINIPYDK----------------NFINQIGWY-LNYDQEINLIGD-YH-  346 (466)
T ss_dssp             CCSEEEECS---------CHHHHHHSCCTTCEECCSST----------------THHHHHTTT-CCTTSCEEEESC-HH-
T ss_pred             CCeEEEECC---------CHHHHhhCCCCCcEECCccH----------------HHHHHHHhc-cCCCCeEEEEEC-Cc-
Confidence            468999999         68999999999999999763                366677655 488999999998 33 


Q ss_pred             HHHHHHHHHHHcCCCcEEE-ccCc
Q 024280          170 SAARVWWMFRVFGHDRVWV-LDGG  192 (269)
Q Consensus       170 ~A~ra~~~L~~~G~~nV~v-LdGG  192 (269)
                      .++++||+|+.+||++|+. |+|+
T Consensus       347 ~a~~a~~~L~~~G~~~v~~~l~g~  370 (466)
T 3r2u_A          347 LVSKATHTLQLIGYDDIAGYQLPQ  370 (466)
T ss_dssp             HHHHHHHHHHTTTCCCEEEEECCC
T ss_pred             hHHHHHHHhhhhhcccccccccCc
Confidence            4899999999999999987 6764

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.52  E-value=9.7e-16  Score=147.04  Aligned_cols=87  Identities=13%  Similarity=0.160  Sum_probs=0.0

Q ss_pred             HHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 024280           83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  162 (269)
Q Consensus        83 L~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~d~~VVv  162 (269)
                      +.+++++++.+|||||         ...+|..||||||+|+|+.++..                 .+..  ++++++||+
T Consensus       379 ~~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~-----------------~~~~--l~~~~~iv~  430 (466)
T 3r2u_A          379 HSEDITGNESHILDVR---------NDNEWNNGHLSQAVHVPHGKLLE-----------------TDLP--FNKNDVIYV  430 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHhCCCcEEEEeC---------CHHHHhcCcCCCCEECCHHHHHH-----------------HHhh--CCCCCeEEE
Confidence            5555666678999999         67899999999999999887532                 1222  568899999


Q ss_pred             eCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh
Q 024280          163 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (269)
Q Consensus       163 Y~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~  198 (269)
                      ||++|.+ |+.+++.|+.+||+||++|+||+.+|++
T Consensus       431 ~C~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~  465 (466)
T 3r2u_A          431 HCQSGIR-SSIAIGILEHKGYHNIINVNEGYKDIQL  465 (466)
T ss_dssp             ------------------------------------
T ss_pred             ECCCChH-HHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence            9999876 7889999999999999999999999975

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=97.12  E-value=0.0009  Score=54.18  Aligned_cols=112  Identities=13%  Similarity=0.089  Sum_probs=58.9

Q ss_pred             ccHHHHHHhhCCCCcEEEEeccCCCCC-CCCC--HhhHhhC-CCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           78 VSVDWLHANLREPDLKVLDASWYMPDE-QRNP--FQEYQVA-HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        78 Is~~eL~~~l~~~~~vIIDvR~~~~~~-~~~~--~~ey~~g-HIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ++++++..+.+.+-..|||+|...... +.+.  ..++..+ +|+|.+++|+...          -++.+.+.+++..+.
T Consensus        30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~----------~~~~~~~~~~~~~l~   99 (156)
T 2f46_A           30 LTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR----------DIQKHDVETFRQLIG   99 (156)
T ss_dssp             CCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT----------TCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC----------CCCHHHHHHHHHHHH
Confidence            345555554433335799999321110 0000  0124444 5999999998641          133455554444331


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHH-HHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWM-FRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~-L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                       +.+.+|+|||..|.+++ -++.+ |...|..    ++-=+..-+..|+.++.
T Consensus       100 -~~~~pVlvHC~sG~Rs~-~l~al~l~~~g~~----~~~a~~~~~~~g~~l~~  146 (156)
T 2f46_A          100 -QAEYPVLAYCRTGTRCS-LLWGFRRAAEGMP----VDEIIRRAQAAGVNLEN  146 (156)
T ss_dssp             -TSCSSEEEECSSSHHHH-HHHHHHHHHTTCC----HHHHHHHHHHTTCCCGG
T ss_pred             -hCCCCEEEECCCCCCHH-HHHHHHHHHcCCC----HHHHHHHHHHcCCCcHH
Confidence             24789999999999654 33322 3445653    12223444556665543

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=82.45  E-value=0.4  Score=37.42  Aligned_cols=25  Identities=12%  Similarity=0.270  Sum_probs=21.5

Q ss_pred             ccCHHHHHHHhh-CCCcEEEccCCCC
Q 024280          244 IWTLEQVKRNIE-EGTYQLVDARSKA  268 (269)
Q Consensus       244 ~~~~~~v~~~l~-~~~~~iiDaRs~~  268 (269)
                      .++.+++++.++ +++.+|||+|+++
T Consensus        24 ~is~~el~~~l~~~~~~~liDVR~~~   49 (137)
T 1qxn_A           24 MLSPKDAYKLLQENPDITLIDVRDPD   49 (137)
T ss_dssp             EECHHHHHHHHHHCTTSEEEECCCHH
T ss_pred             ccCHHHHHHHHhcCCCeEEEECCCHH
Confidence            488999999887 6779999999864

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=81.40  E-value=0.42  Score=36.94  Aligned_cols=25  Identities=16%  Similarity=0.084  Sum_probs=21.3

Q ss_pred             ccCHHHHHHHhh--CCCcEEEccCCCC
Q 024280          244 IWTLEQVKRNIE--EGTYQLVDARSKA  268 (269)
Q Consensus       244 ~~~~~~v~~~l~--~~~~~iiDaRs~~  268 (269)
                      .++.+++++.++  +++.+|||+|+++
T Consensus        23 ~is~~~l~~~l~~~~~~~~liDvR~~~   49 (139)
T 2hhg_A           23 TLTTADAIALHKSGASDVVIVDIRDPR   49 (139)
T ss_dssp             EECHHHHHHHHHTTCTTEEEEECSCHH
T ss_pred             ccCHHHHHHHHhccCCCeEEEECCCHH
Confidence            488999999988  6689999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	269
d1okga1	156	c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransf	2e-36
d1rhsa1	149	c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [Ta	1e-34
d1urha1	147	c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransf	3e-33
d1uara1	143	c.46.1.2 (A:2-144) Sulfurtransferase {Thermus ther	2e-24
d1hzma_	154	c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat	3e-16
d1e0ca1	135	c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter	4e-14
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	4e-12
d2gwfa1	135	c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal h	6e-10
d1gmxa_	108	c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia	7e-09
d1yt8a3	157	c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase	8e-09
d1tq1a_	119	c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc	1e-08
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	7e-08
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	1e-06
d1yt8a2	101	c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase P	1e-07
d1t3ka_	132	c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {	1e-07
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	3e-07
d1yt8a1	136	c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase	3e-07
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	4e-07
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	2e-06
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	4e-05
d1c25a_	161	c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId:	0.003

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 156

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score =  124 bits (313), Expect = 2e-36
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR- 131
           P +  +    +  +L   + +++D  + +  +  +   +Y   H+  A+  DVD    + 
Sbjct: 5   PGKVFLDPSEVADHLA--EYRIVDCRYSLKIK-DHGSIQYAKEHVKSAIRADVDTNLSKL 61

Query: 132 --TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWV 188
             T+   H LP    F     A G+  +  ++ YD + G     R+WWM    G D  +V
Sbjct: 62  VPTSTARHPLPPCAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGAD-AYV 120

Query: 189 LDGGLPRWRASGYDVES 205
           ++GG    +A+G ++ES
Sbjct: 121 INGGFQACKAAGLEMES 137

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 149

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  119 bits (300), Expect = 1e-34
 Identities = 66/139 (47%), Positives = 81/139 (58%), Gaps = 7/139 (5%)

Query: 76  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 189
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 190 DGGLPRWRASGYDVESSAS 208
           +GG   W   G+ V S  S
Sbjct: 127 NGGFRNWLKEGHPVTSEPS 145

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score =  116 bits (291), Expect = 3e-33
 Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 3   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 62

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 63  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 122

Query: 195 RWRASGYDVESSAS 208
            W+     +E  A 
Sbjct: 123 GWQRDDLLLEEGAV 136

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 143

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 93.4 bits (231), Expect = 2e-24
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 6   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQR--DFWDP 55

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 56  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 115

Query: 195 RWRASGYDVESSA 207
           +W   G  + +  
Sbjct: 116 KWVEEGRPLTTEV 128

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 3e-16
 Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 27/144 (18%)

Query: 71  VSPKEPVVSVDWLHANLREPDLKV--LDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 128
            S      +V WL+  L   + ++  +D           P + Y+ +HI  A+   + G+
Sbjct: 11  ASEMAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGI 61

Query: 129 ADR-----TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------IFSAARVWWM 177
             R        +  +    E              D +V+YD             + +  +
Sbjct: 62  MLRRLQKGNLPVRALFTRGEDRD---RFTRRCGTDTVVLYDESSSDWNENTGGESLLGLL 118

Query: 178 FRVFGHD--RVWVLDGGLPRWRAS 199
            +    +  R + L+GG  +++A 
Sbjct: 119 LKKLKDEGCRAFYLEGGFSKFQAE 142

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 65.5 bits (158), Expect = 4e-14
 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 14/144 (9%)

Query: 64  ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFF 123
            D+++L +     V+    L A L  P+L ++D +             Y   HIPGA F 
Sbjct: 2   DDFASLPL-----VIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFV 47

Query: 124 DVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH 183
           D           P + P  E   +    LG   +   VVYD +G   A R  W+  V G 
Sbjct: 48  DPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107

Query: 184 DRVWVLDGGLPRWRASGYDVESSA 207
            R   L+GGL  W A    +    
Sbjct: 108 QRYHYLNGGLTAWLAEDRPLSREL 131

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 60.3 bits (145), Expect = 4e-12
 Identities = 32/139 (23%), Positives = 44/139 (31%), Gaps = 10/139 (7%)

Query: 68  TLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA-HIPGALFFDVD 126
            LS+   EP  S D+L   L   DL + DA    P E R          HIPGA+ F+  
Sbjct: 5   ALSLHD-EPTASRDYLLGRLGAADLAIWDARS--PQEYRGEKVLAAKGGHIPGAVNFE-- 59

Query: 127 GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRV 186
                    P          A          D  +V   +    +   + + +  G+ RV
Sbjct: 60  ---WTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRV 116

Query: 187 WVLDGGLPRW-RASGYDVE 204
               G    W       VE
Sbjct: 117 KGYAGSWGEWGNHPDTPVE 135

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 6e-10
 Identities = 15/136 (11%), Positives = 41/136 (30%), Gaps = 25/136 (18%)

Query: 78  VSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
           ++   L+  + + ++ ++  DA      +          + I  +L    + ++   T  
Sbjct: 3   ITAKELYTMMTDKNISLIIMDARRMQDYQD---------SCILHSLSVPEEAISPGVT-- 51

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF------------GH 183
              + +     +  +     N + +V+ D        ++    R                
Sbjct: 52  ASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLR 111

Query: 184 DRVWVLDGGLPRWRAS 199
           +   VL+GG   W   
Sbjct: 112 NEPLVLEGGYENWLLC 127

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

 Score = 50.5 bits (120), Expect = 7e-09
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 30/127 (23%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 137
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDNDF 57

Query: 138 MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 197
             P                     V    G  S           G+D V+ +DGG   W+
Sbjct: 58  DTPVM-------------------VMCYHGNSSK-GAAQYLLQQGYDVVYSIDGGFEAWQ 97

Query: 198 ASGYDVE 204
              +  E
Sbjct: 98  R-QFPAE 103

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 157

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 51.5 bits (122), Expect = 8e-09
 Identities = 33/188 (17%), Positives = 53/188 (28%), Gaps = 36/188 (19%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           P+   +    L   L EP  +VLD +                  +   L   ++ +    
Sbjct: 2   PRADTIDPTTLADWLGEPGTRVLDFTA--SANYAKRHIPGAAWVLRSQLKQALERLGTAE 59

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
                                        V        A       +      V++LDGG
Sbjct: 60  R---------------------------YVLTCGSSLLARFAVAEVQALSGKPVFLLDGG 92

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVGPTTFQTKFQPHLIWTLEQVKR 252
              W A+G   E   S    L AS   +   + Y+G   P       Q +L W    V++
Sbjct: 93  TSAWVAAGLPTEDGES----LLASPRIDRYRRPYEGTDNPREA---MQGYLDWEFGLVEQ 145

Query: 253 NIEEGTYQ 260
              +GT+ 
Sbjct: 146 LGRDGTHG 153

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.9 bits (118), Expect = 1e-08
 Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             VSV   H  L     + LD         R P +E+   H  GA+            + 
Sbjct: 8   SSVSVTVAHD-LLLAGHRYLDV--------RTP-EEFSQGHACGAINVPYMNRGASGMSK 57

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                 +              +   ++   +    + +        G   V  + GG   
Sbjct: 58  NTDFLEQ--------VSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSA 109

Query: 196 WRASGYDVES 205
           W  +G   ++
Sbjct: 110 WAKNGLPTKA 119

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.3 bits (114), Expect = 7e-08
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 74  KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
           +  + + + +  NL     +++D+          P  +  V    G +   V+       
Sbjct: 9   RSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDA-VGLDSGHIRGSVNMPFMNFL 67

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL 193
                  S E   A   A  ++    L+    KG  +A  +     + G   V + DG  
Sbjct: 68  TEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKG-VTACHIALAAYLCGKPDVAIYDGSW 126

Query: 194 PRWRASGY 201
             W     
Sbjct: 127 FEWFHRAP 134

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 234 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
            F+      L+ T EQV  N+E   +QLVD+R++ R
Sbjct: 2   IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGR 37

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.5 bits (109), Expect = 1e-07
 Identities = 22/125 (17%), Positives = 34/125 (27%), Gaps = 28/125 (22%)

Query: 77  VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
           V +   + A L    +L +LD               +  AH   A    +  +       
Sbjct: 3   VRTFHDIRAALLARRELALLDVREE---------DPFAQAHPLFAANLPLSRLELEIHAR 53

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                                +D  +     G   A          G+  V +LDGGL  
Sbjct: 54  VPR------------------RDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSG 95

Query: 196 WRASG 200
           WR +G
Sbjct: 96  WRNAG 100

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 132

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 47.4 bits (111), Expect = 1e-07
 Identities = 17/139 (12%), Positives = 36/139 (25%), Gaps = 16/139 (11%)

Query: 69  LSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 128
           ++++     ++   L    R P++ ++D      +   +       A             
Sbjct: 1   MAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQ 60

Query: 129 ADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWV 188
             +  +      +         A  L N                 +       G   + +
Sbjct: 61  NVKDKDTLVFHSALSQVRGPTCARRLVN----------------YLDEKKEDTGIKNIMI 104

Query: 189 LDGGLPRWRASGYDVESSA 207
           L+ G   W ASG  V   A
Sbjct: 105 LERGFNGWEASGKPVCRCA 123

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 46.7 bits (110), Expect = 3e-07
 Identities = 19/130 (14%), Positives = 30/130 (23%), Gaps = 10/130 (7%)

Query: 90  PDLKVLDASWYMPDE----QRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF 145
           P   + DA     D      R    +    HI GA             +   +   EE  
Sbjct: 11  PQAIITDARS--ADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIR 68

Query: 146 ---AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGY 201
                 V   G        V+      +A     +    G    ++  G    +      
Sbjct: 69  HNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRP 128

Query: 202 DVESSASGDA 211
            +  S   D 
Sbjct: 129 PIMRSIIDDY 138

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.4 bits (109), Expect = 3e-07
 Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 27/134 (20%)

Query: 76  PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           P ++ + + A L    +  +LDA        R    EYQ   IPG +      +  R   
Sbjct: 24  PSLAAEEVQALLDARAEAVILDA--------RRF-DEYQTMSIPGGISVPGAELVLRVAE 74

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           L     +                  ++V       S      +      + V  L  G  
Sbjct: 75  LAPDPRTR-----------------VIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTI 117

Query: 195 RWRASGYDVESSAS 208
            W  +G  +E   +
Sbjct: 118 GWTLAGQQLEHGQT 131

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.0 bits (108), Expect = 4e-07
 Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 17/122 (13%)

Query: 85  ANLREPDLKVLDA----------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             ++E    ++D           +      Q    +     HIPGA          +  N
Sbjct: 14  IKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAG---HIPGAKNIPWA----KAVN 66

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 S E   A    LG+     +VVY      S+   + +  + G+  V   DG   
Sbjct: 67  PDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWT 126

Query: 195 RW 196
            W
Sbjct: 127 EW 128

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 43.4 bits (101), Expect = 2e-06
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 10/126 (7%)

Query: 74  KEPVVSVDWLHANLREPDLKVLDA---SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
            E VV V  +     E   +++DA   + +   E   P    +  HIPGAL         
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAARFN-AEVDEPRPGLRRGHIPGALNVP-----W 55

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
                   L + +   A     G+     ++V  G G+  AA V           V + D
Sbjct: 56  TELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYD 114

Query: 191 GGLPRW 196
           G    W
Sbjct: 115 GAWSEW 120

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 40.0 bits (92), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 241 PHLIWTLEQVKRNIEEGTYQLVDARSKAR 269
           P  +  +  V     E T Q++DAR  AR
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAAR 30

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 25/165 (15%), Positives = 46/165 (27%), Gaps = 39/165 (23%)

Query: 50  QSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRN 107
               +  ++A G+  D   +S     P +    L+        +  ++D         R 
Sbjct: 7   SKGYLFHTVA-GKHQDLKYIS-----PEIMASVLNGKFANLIKEFVIIDC--------RY 52

Query: 108 PFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG 167
           P  EY+  HI GA+            NL      E+             +  +V +    
Sbjct: 53  P-YEYEGGHIKGAV------------NLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFS 99

Query: 168 IFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYD 202
                R+    R             +  ++VL GG   +      
Sbjct: 100 SERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	269
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	100.0
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	100.0
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	100.0
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.97
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.96
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.95
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.92
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.9
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.89
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.88
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.88
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.86
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.86
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.86
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.85
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.85
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.83
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.8
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	99.74
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	99.72
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	99.61
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	88.63
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	81.55

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-35  Score=242.91  Aligned_cols=134  Identities=43%  Similarity=0.859  Sum_probs=122.3

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCC-CCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~-~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..|||++||+++|++++++|||||+.++... .+..++|..||||||+|+++..+.+...+.++++|+.++|+++++++|
T Consensus         2 ~~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~~~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~G   81 (147)
T d1urha1           2 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   81 (147)
T ss_dssp             CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             CccCcHHHHHHHhCCCCeEEEEeeCCCCCccCccHHHHHHhCCccccEEeehhhhccccccccccCCCHHHHHHHHHHhC
Confidence            3689999999999999999999997765542 234578999999999999999988888888999999999999999999


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      |+++++||+||+.+..+|+|+||+|+++||+||++||||+.+|+++|+|++++.+
T Consensus        82 i~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~W~~~g~pv~~~~~  136 (147)
T d1urha1          82 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV  136 (147)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred             cCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHHHHHcCCCccCCCC
Confidence            9999999999988777799999999999999999999999999999999999876

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-33  Score=229.77  Aligned_cols=142  Identities=27%  Similarity=0.541  Sum_probs=125.1

Q ss_pred             CCCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHH
Q 024280           71 VSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (269)
Q Consensus        71 ~~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~  150 (269)
                      +++++.+||++||++++++++++|||+|        .+..+|..||||||+|+|+....  ..+..+++++.+.|+++++
T Consensus         2 ~~~p~~lVs~~~l~~~l~~~~v~iiDvr--------~~~~~y~~gHIPgAi~~~~~~~~--~~~~~~~l~~~~~l~~~~~   71 (143)
T d1uara1           2 YAHPEVLVSTDWVQEHLEDPKVRVLEVD--------EDILLYDTGHIPGAQKIDWQRDF--WDPVVRDFISEEEFAKLME   71 (143)
T ss_dssp             CSCGGGEECHHHHHTTTTCTTEEEEEEC--------SSTTHHHHCBCTTCEEECHHHHH--BCSSSSSBCCHHHHHHHHH
T ss_pred             CCCCCccCcHHHHHHHhCCCCeEEEECC--------CCHHHHhcCCCCCcccccccccc--cccccccchhhHHHHHHhh
Confidence            5678889999999999998899999999        34678999999999999987532  2345678999999999999


Q ss_pred             HcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCCcchHHHhhhhHHHHHHhhcCCC
Q 024280          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (269)
Q Consensus       151 ~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~~~~~~~~~~~~e~~~~~~~~~~  230 (269)
                      ++||+++++||+||+.+..+|+|+||+|+++||+||++||||+.+|+.+|+|++++.+                    .+
T Consensus        72 ~~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~G~~~V~vldGG~~~W~~~g~p~~~~~~--------------------~~  131 (143)
T d1uara1          72 RLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP--------------------SY  131 (143)
T ss_dssp             HTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC--------------------CC
T ss_pred             hhccCCCceEEEecCCCcccchhHHHHHHHhCCceEEEEcCcHHHHHHCCCCccCCCC--------------------CC
Confidence            9999999999999998888899999999999999999999999999999999999875                    25


Q ss_pred             CCcccccccCCc
Q 024280          231 GPTTFQTKFQPH  242 (269)
Q Consensus       231 ~~~~~~~~~~~~  242 (269)
                      .+.+|.++++++
T Consensus       132 ~~~~~~~~~~~e  143 (143)
T d1uara1         132 PPGRYEVPYRDE  143 (143)
T ss_dssp             CCCCCCCCCCCG
T ss_pred             CCccccccCCCC
Confidence            677888777653

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.8e-33  Score=228.51  Aligned_cols=136  Identities=48%  Similarity=0.887  Sum_probs=121.2

Q ss_pred             CCCCCcccHHHHHHhhC----CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHH
Q 024280           72 SPKEPVVSVDWLHANLR----EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (269)
Q Consensus        72 ~~~~~lIs~~eL~~~l~----~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~  147 (269)
                      .++.+|||++||+++++    +++++|||||+++++.. ++..+|..||||||+|++++.+........+++|+.+.|++
T Consensus         4 ~~~~~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~~-~~~~~y~~gHIPGAv~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (149)
T d1rhsa1           4 VLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTR-EARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFAD   82 (149)
T ss_dssp             SCCCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSC-CHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHH
T ss_pred             ccCCCccCHHHHHHHHhccCCCCCEEEEEecCcCCCCc-chHHHHHHhcccCceeccHHhhcccccchhhhhhhhHHHHH
Confidence            34678999999999986    34799999998877643 35789999999999999999888777778899999999999


Q ss_pred             HHHHcCCCCCCcEEEeCCC--ChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          148 AVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       148 ~l~~lGI~~d~~VVvY~~~--g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      .|+.+||+++++|||||..  ++..|+|+||+|+++||+||++||||+.+|+++|+|++++.+
T Consensus        83 ~l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~~~W~~~G~pv~~~~~  145 (149)
T d1rhsa1          83 YVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPS  145 (149)
T ss_dssp             HHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             HHhhhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcHHHHHHCcCcccCCCC
Confidence            9999999999999999964  445689999999999999999999999999999999998865

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.97  E-value=1.1e-31  Score=221.34  Aligned_cols=130  Identities=23%  Similarity=0.482  Sum_probs=113.0

Q ss_pred             CCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccc-cccc--cCCCCCCCCCHHHHHHHHHH
Q 024280           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADR--TTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        75 ~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~-l~~~--~~~~~~~lp~~~~f~~~l~~  151 (269)
                      ..|||++||.++++  +++|||||+++.+... +..+|..||||||++++++. +...  ...+++|||+.+.|++.|++
T Consensus         7 ~~lvs~~~L~~~l~--d~~iiD~r~~l~~~~~-g~~~Y~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP~~~~~~~~l~~   83 (156)
T d1okga1           7 KVFLDPSEVADHLA--EYRIVDCRYSLKIKDH-GSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPCAEFIDWCMA   83 (156)
T ss_dssp             CCEECHHHHTTCGG--GSEEEECCCCSSSTTT-TTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEeCHHHHHHhcC--CCEEEEeeccCCCCcc-hHHHHHHcCCCCCeEcCHHHhcccccCCCCCccccCCHHHHHHHHHh
Confidence            46999999999985  4899999988776443 46899999999999999876 3332  34567899999999999999


Q ss_pred             cCCCCCCcEEEeCCC-ChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          152 LGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       152 lGI~~d~~VVvY~~~-g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      +||+++++||+||+. |..+|+|+||+|+++|| ||++||||+.+|+++|+|++++.+
T Consensus        84 lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~-~v~iLdGG~~aW~~~G~pv~t~~p  140 (156)
T d1okga1          84 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEP  140 (156)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCC
T ss_pred             ccccCCceEEEEeCCCCchHHHHHHHHHHHcCC-eeEEeCCCHHHHHHCCCCCCCCCC
Confidence            999999999999865 45679999999999998 699999999999999999999875

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.96  E-value=7.9e-29  Score=196.97  Aligned_cols=128  Identities=29%  Similarity=0.462  Sum_probs=116.3

Q ss_pred             CCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        72 ~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      ++...+|+++||++++++++++|||||         ...+|..||||||+|+|+..+..............+.++..+..
T Consensus         5 ~~~p~lIs~~el~~~l~~~~~viiDvR---------~~~ey~~gHIpgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (135)
T d1e0ca1           5 ASLPLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGE   75 (135)
T ss_dssp             TTSCSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHH
T ss_pred             CCCCcEeeHHHHHHHhcCCCeEEEECC---------CHHHHhcccCccccccchhhhhhcccccchhhcchhhhhhhhcc
Confidence            344578999999999998899999999         68999999999999999998776666666777888999999999


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      .++..+..+|+||..+...+++++|+|+.+||+||++|+||+.+|+++|+|++++.+
T Consensus        76 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~G~~~V~~l~GG~~~W~~~g~p~~~~~p  132 (135)
T d1e0ca1          76 LGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP  132 (135)
T ss_dssp             HTCCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred             ccccccccccccccccCccchhhHHHHHhccCCCEEEecChHHHHHHCCCCCCCCCC
Confidence            999999999999988777899999999999999999999999999999999999876

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.95  E-value=8.6e-28  Score=193.52  Aligned_cols=119  Identities=27%  Similarity=0.382  Sum_probs=105.0

Q ss_pred             CCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHh--------hCCCCCCeeccccccccccCCCCCCCCCHH
Q 024280           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ--------VAHIPGALFFDVDGVADRTTNLPHMLPSEE  143 (269)
Q Consensus        72 ~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~--------~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~  143 (269)
                      .+.++++|.+||++++++++++|||+|         +..+|.        .||||||+|+|+..+.+.+    +.+++.+
T Consensus         8 ~~~~~~~s~d~l~~~l~~~~~~liD~R---------~~~ey~G~~~~~~~~GhIPGAinip~~~~~~~~----~~~~~~~   74 (136)
T d1e0ca2           8 LHDEPTASRDYLLGRLGAADLAIWDAR---------SPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPS----RALRIRT   74 (136)
T ss_dssp             CCSTTBCCHHHHHHHTTCTTEEEEECS---------CHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGG----GTTEECT
T ss_pred             cCCCceEcHHHHHHhhCCCCeEEEECc---------ChHHhcccccccccCCcchhHhhhhhhhhhccc----cccchhH
Confidence            446789999999999999899999999         678885        7999999999999876543    3456667


Q ss_pred             HHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh-CCCcee
Q 024280          144 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVE  204 (269)
Q Consensus       144 ~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~-~G~pv~  204 (269)
                      +|++.++.+|++++++||+||++|.+ |+++||+|+.+||+||++|+||+.+|.+ .++|+|
T Consensus        75 ~l~~~~~~~gi~~~~~vV~yC~~G~~-a~~~~~~l~~~G~~~v~~ydGg~~eW~~~~~~PvE  135 (136)
T d1e0ca2          75 DIAGRLEELGITPDKEIVTHCQTHHR-SGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE  135 (136)
T ss_dssp             THHHHHHHTTCCTTSEEEEECSSSSH-HHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred             HHhhhhhhcccCCCCceEEeCCChHH-HHHHHHHHHHcCCCCcEEecCCHHHHhcCCCCCCc
Confidence            89999999999999999999998875 8899999999999999999999999976 588886

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=1.2e-25  Score=182.64  Aligned_cols=117  Identities=17%  Similarity=0.210  Sum_probs=104.5

Q ss_pred             CCCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHh------------hCCCCCCeeccccccccccCCCCCCC
Q 024280           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ------------VAHIPGALFFDVDGVADRTTNLPHML  139 (269)
Q Consensus        72 ~~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~------------~gHIPGAi~ip~~~l~~~~~~~~~~l  139 (269)
                      .+++.+++.+|+.+.+++++++|||+|         +..+|.            .||||||+|+|+..+.+.+    +.+
T Consensus         7 ~~~~~i~~~~ev~~~l~~~~~~iiD~R---------~~~ef~G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~----~~~   73 (144)
T d1rhsa2           7 LNRSLLKTYEQVLENLESKRFQLVDSR---------AQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED----GFE   73 (144)
T ss_dssp             CCGGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT----SCB
T ss_pred             cChHHeecHHHHHHHhcCCCcEEEECC---------CCHHHcCCCCCCccccceeeehhhhhhcchhhhhhhh----ccc
Confidence            456789999999999988899999999         677874            6999999999999876543    467


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCc
Q 024280          140 PSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (269)
Q Consensus       140 p~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~p  202 (269)
                      ++++++++++...||+++++||+||++|.+ |+.+||+|+.+||+||++|||||.+|...+.|
T Consensus        74 ~~~~~l~~~~~~~gi~~~~~iI~yC~sG~~-A~~~~~~l~~lG~~~v~~YdGsw~eW~~~~~p  135 (144)
T d1rhsa2          74 KSPEELRAMFEAKKVDLTKPLIATCRKGVT-ACHIALAAYLCGKPDVAIYDGSWFEWFHRAPP  135 (144)
T ss_dssp             CCHHHHHHHHHHTTCCTTSCEEEECSSSST-HHHHHHHHHHTTCCCCEEESSHHHHHHHHSCG
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEEecccch-HHHHHHHHHHcCCCCCEEeCCCHHHHhhcCCC
Confidence            889999999999999999999999999886 88999999999999999999999999987643

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=3.7e-24  Score=173.13  Aligned_cols=115  Identities=23%  Similarity=0.375  Sum_probs=97.2

Q ss_pred             cHHHHHHhh---CCCCcEEEEeccCCCCCCCCCHhhHh----------------hCCCCCCeeccccccccccCCCCCCC
Q 024280           79 SVDWLHANL---REPDLKVLDASWYMPDEQRNPFQEYQ----------------VAHIPGALFFDVDGVADRTTNLPHML  139 (269)
Q Consensus        79 s~~eL~~~l---~~~~~vIIDvR~~~~~~~~~~~~ey~----------------~gHIPGAi~ip~~~l~~~~~~~~~~l  139 (269)
                      ..+++.+.+   ++++.+|||+|         +.++|.                .||||||+|+|+.++.+.+    +++
T Consensus         5 ~~~~v~~~~~~~~~~~~~lvD~R---------~~~ey~G~~~~~~~~~~~~~~r~GhIpgA~nlp~~~~~~~~----~~~   71 (141)
T d1uara2           5 YRDDVLEHIIKVKEGKGALVDVR---------SPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD----GTF   71 (141)
T ss_dssp             CHHHHHHHHHHHHTTSEEEEECS---------CHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT----SCB
T ss_pred             cHHHHHHHHHHhhCCCcEEEeCC---------CHHHcCCccCcccccCcccceeeeEeCCccccccccccccc----ccc
Confidence            344554433   35678999999         577775                7999999999999876543    467


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHH-cCCCcEEEccCcHHHHHh-CCCceecCC
Q 024280          140 PSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (269)
Q Consensus       140 p~~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~-~G~~nV~vLdGG~~~W~~-~G~pv~~~~  207 (269)
                      .+.++|++.+..+||+++++||+||++|.+ |+.+||+|+. +||+||++|||||.+|.+ .++||+++.
T Consensus        72 ~~~~~~~~~~~~~gi~~d~~vV~yC~~G~~-As~~~~~l~~~~G~~~v~~ydGs~~eW~~~~~~Pv~~g~  140 (141)
T d1uara2          72 KSAEELRALYEPLGITKDKDIVVYCRIAER-SSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  140 (141)
T ss_dssp             CCHHHHHHHHGGGTCCTTSEEEEECSSHHH-HHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             ccHHHHHHHHHHhCCCCCCeEEEEecCcch-HHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            889999999999999999999999999876 8889999985 899999999999999966 799999874

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=6e-23  Score=164.79  Aligned_cols=106  Identities=22%  Similarity=0.284  Sum_probs=93.1

Q ss_pred             CcccHHHHHHhhC-CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCC
Q 024280           76 PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (269)
Q Consensus        76 ~lIs~~eL~~~l~-~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI  154 (269)
                      +.|++++|+++++ +++++|||+|         +..+|..||||||+|+|...                 |...+.++..
T Consensus        24 ~~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpGAi~ip~~~-----------------l~~~~~~l~~   77 (136)
T d1yt8a1          24 PSLAAEEVQALLDARAEAVILDAR---------RFDEYQTMSIPGGISVPGAE-----------------LVLRVAELAP   77 (136)
T ss_dssp             CEECHHHHHHHHHTTCSEEEEECS---------CHHHHHHSBCTTCEECCGGG-----------------HHHHHHHHCC
T ss_pred             CccCHHHHHHHHhcCCCcEEEEcC---------ChhhccceecCCchhhhhhH-----------------HHHHhhcccc
Confidence            3599999999885 4568999999         68999999999999999764                 5566777878


Q ss_pred             CCCCcEEEeCCCChHHHHHHHHHHHHcCCCc-EEEccCcHHHHHhCCCceecCCC
Q 024280          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       155 ~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~n-V~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      +++++||+||.+|.+ +..++.+|+..||+| |++|+||+.+|+.+|+|++++..
T Consensus        78 ~~~~~iV~~C~~g~r-s~~aa~~L~~~G~~~~V~~L~GG~~~W~~~G~pve~g~~  131 (136)
T d1yt8a1          78 DPRTRVIVNCAGRTR-SIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQT  131 (136)
T ss_dssp             STTSEEEEECSSSHH-HHHHHHHHHHTTCSSCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             cccceEEEEcCCCCc-hHHHHHHHHHcCCCceEEEeCCcHHHHHHCCCCceeCCC
Confidence            889999999999886 777888899999986 99999999999999999999864

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.88  E-value=2.3e-22  Score=164.74  Aligned_cols=104  Identities=27%  Similarity=0.393  Sum_probs=91.4

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|++++|++++++++++|||+|         ...+|..||||||+|+|+..+                 ...+..  +.
T Consensus         5 ~~Is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghIpga~~~~~~~~-----------------~~~~~~--~~   56 (157)
T d1yt8a3           5 DTIDPTTLADWLGEPGTRVLDFT---------ASANYAKRHIPGAAWVLRSQL-----------------KQALER--LG   56 (157)
T ss_dssp             CEECHHHHHHHTTSTTEEEEECS---------CHHHHHHCBCTTCEECCGGGH-----------------HHHHHH--HC
T ss_pred             CEECHHHHHHHHhCCCeEEEEeC---------CHHHHhhcccccceecccccc-----------------cccccc--cc
Confidence            35999999999988889999999         689999999999999998753                 233333  36


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      ++++||+||.+|.+ +..+++.|+.+||+||++|+||+.+|.++|+|++++..
T Consensus        57 ~~~~vv~~c~~g~r-s~~~a~~l~~~G~~~v~~L~GG~~~W~~aGlp~~~~~~  108 (157)
T d1yt8a3          57 TAERYVLTCGSSLL-ARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGES  108 (157)
T ss_dssp             CCSEEEEECSSSHH-HHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSC
T ss_pred             cCcceeeccCCcch-HHHHHHHHhcccCceEEEecCCHHHHhhCCCCCcCCCC
Confidence            78999999999886 78889999999999999999999999999999999765

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=2.9e-23  Score=162.04  Aligned_cols=109  Identities=25%  Similarity=0.355  Sum_probs=96.3

Q ss_pred             CCCCcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHh-----------hCCCCCCeeccccccccccCCCCCCCCC
Q 024280           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPS  141 (269)
Q Consensus        73 ~~~~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~-----------~gHIPGAi~ip~~~l~~~~~~~~~~lp~  141 (269)
                      +++.+++.+|+..++++++.+|||+|         +.++|.           .||||||+|+|+..+..     ...+.+
T Consensus         1 np~~~~~~~ev~~~~~~~~~~liD~R---------~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~-----~~~~~~   66 (120)
T d1urha2           1 NPEAVVKVTDVLLASHENTAQIIDAR---------PAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-----EGELKT   66 (120)
T ss_dssp             CGGGBCCHHHHHHHHHHTCSEEEECS---------CHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-----SSSBCC
T ss_pred             ChhHHccHHHHHHHhhCCCcEEEeCC---------CHHHcCcccCCcccccccccccccchhchhhccc-----ccccCC
Confidence            45678999999999988889999999         577774           79999999999887543     245778


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHH
Q 024280          142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW  196 (269)
Q Consensus       142 ~~~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W  196 (269)
                      .+++++.+...|++++++||+||++|.+ |++++++|+.+||+||++|+|||.+|
T Consensus        67 ~~~~~~~~~~~g~~~~~~ii~yC~sG~~-A~~~~~~L~~lG~~~v~~y~Gs~~eW  120 (120)
T d1urha2          67 TDELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYDGAWSEW  120 (120)
T ss_dssp             HHHHHHHHHTTTCCSSSCEEEECCSSST-HHHHHHHHHHTTCSSCEEECCSCCC-
T ss_pred             HHHhhhhhhhcccCccCceEEEccchhH-HHHHHHHHHHcCCCCceEcCCChhhC
Confidence            8999999999999999999999999986 89999999999999999999999888

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.2e-22  Score=155.08  Aligned_cols=99  Identities=20%  Similarity=0.288  Sum_probs=87.1

Q ss_pred             cccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCCC
Q 024280           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (269)
Q Consensus        77 lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~~  156 (269)
                      .||++++.+++++++++|||+|         ...+|..||||||+|+|.+.                 |.+.+..  +++
T Consensus         6 ~Is~~e~~~~l~~~~~~liDvR---------~~~e~~~ghI~gA~~ip~~~-----------------l~~~~~~--~~~   57 (108)
T d1gmxa_           6 CINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTNDT-----------------LGAFMRD--NDF   57 (108)
T ss_dssp             EECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHHH-----------------HHHHHHH--SCT
T ss_pred             EeCHHHHHHHHHCCCeEEEECC---------CHHHHHhcCCCCcccccchh-----------------HHHHhhh--ccc
Confidence            5999999999988889999999         68999999999999998654                 5566666  488


Q ss_pred             CCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceec
Q 024280          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (269)
Q Consensus       157 d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~  205 (269)
                      +++|||||.+|.+ +.+++..|+..||+||++|+||+.+|+++ +|++.
T Consensus        58 ~~~ivv~c~~g~r-s~~~a~~L~~~G~~~v~~l~GG~~~W~~~-~p~e~  104 (108)
T d1gmxa_          58 DTPVMVMCYHGNS-SKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEV  104 (108)
T ss_dssp             TSCEEEECSSSSH-HHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGE
T ss_pred             cCcccccCCCChH-HHHHHHHHHHcCCCCEEEEcChHHHHHHc-CCCcc
Confidence            9999999998886 78888999999999999999999999754 88764

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=7e-22  Score=149.76  Aligned_cols=98  Identities=24%  Similarity=0.276  Sum_probs=84.7

Q ss_pred             cccHHHHHHhhC-CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           77 VVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        77 lIs~~eL~~~l~-~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ++|+++|++.+. +++++|||+|         +..+|..||||||+|+|.+.                 +...+..+..+
T Consensus         3 v~S~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAi~~~~~~-----------------~~~~~~~~~~~   56 (101)
T d1yt8a2           3 VRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSR-----------------LELEIHARVPR   56 (101)
T ss_dssp             EECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGG-----------------HHHHHHHHSCC
T ss_pred             cCcHHHHHHHHHCCCCeEEEECC---------CHHHHHhccCCCcccccccc-----------------hhhhhhhcccc
Confidence            578999998764 4579999999         68999999999999999765                 33445566678


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCC
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  201 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~  201 (269)
                      ++++||+||..+.+ +..+++.|+.+||+||++|+||+.+|+++|.
T Consensus        57 ~~~~vv~~~~~g~~-s~~~~~~l~~~G~~nV~~l~GG~~~W~~aGg  101 (101)
T d1yt8a2          57 RDTPITVYDDGEGL-APVAAQRLHDLGYSDVALLDGGLSGWRNAGG  101 (101)
T ss_dssp             TTSCEEEECSSSSH-HHHHHHHHHHTTCSSEEEETTHHHHHHHTTC
T ss_pred             cCceeeeccchhhh-HHHHHHHHHHcCCCcEEEeCChHHHHHHCcC
Confidence            88999999998876 7889999999999999999999999999884

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=1.6e-22  Score=158.34  Aligned_cols=111  Identities=20%  Similarity=0.192  Sum_probs=89.4

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|+++.+.+++++ +.+|||||         +..+|..||||||+|+|+..+...     ......+.+.++..  .++
T Consensus         8 ~~i~~~~a~~l~~~-g~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~-----~~~~~~~~~~~~~~--~~~   70 (119)
T d1tq1a_           8 SSVSVTVAHDLLLA-GHRYLDVR---------TPEEFSQGHACGAINVPYMNRGAS-----GMSKNTDFLEQVSS--HFG   70 (119)
T ss_dssp             EEEEHHHHHHHHHH-TCCEEEES---------CHHHHHHCCBTTBEECCSCCCSTT-----TCCCTTTHHHHHTT--TCC
T ss_pred             CccCHHHHHHHHHC-cCEEEECC---------CHHHHHcCCCCCccchhhcccccc-----cccccHHHHHHHHH--hcC
Confidence            46889988888865 46899999         689999999999999998764321     12222334444433  467


Q ss_pred             CCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCcee
Q 024280          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~  204 (269)
                      ++++|||||++|.+ +..++.+|+.+||+||++|+||+.+|.++|+|++
T Consensus        71 ~~~~iv~~C~~G~r-s~~a~~~L~~~G~~nv~~l~GG~~~W~~~g~P~e  118 (119)
T d1tq1a_          71 QSDNIIVGCQSGGR-SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK  118 (119)
T ss_dssp             TTSSEEEEESSCSH-HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred             CCcEEEEEcCCcCc-HHHHHHHHHhcccCCeEEecChHHHHHHCCCCcc
Confidence            89999999999886 7889999999999999999999999999999986

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.85  E-value=4.3e-22  Score=160.33  Aligned_cols=108  Identities=17%  Similarity=0.202  Sum_probs=86.6

Q ss_pred             CCCcEEEEeccCCCCCCCCCHhhHh-----------hCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHc-----
Q 024280           89 EPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-----  152 (269)
Q Consensus        89 ~~~~vIIDvR~~~~~~~~~~~~ey~-----------~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~l-----  152 (269)
                      .++++|||+|         +.++|.           .||||||+|+|+..+...... ...+.+.+++.+.+..+     
T Consensus        10 ~p~~vlvD~R---------~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~   79 (139)
T d1okga2          10 PPQAIITDAR---------SADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGD-GKVLRSEEEIRHNIMTVVQGAG   79 (139)
T ss_dssp             CTTCCEEECS---------CHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSS-SCEECCHHHHHHHHHTTCC---
T ss_pred             CCCeEEEeCC---------CHHHhCCcCCCcccCCcCceeCCCeeccchhhcccccc-ccccCCHHHhhhhhhhhhhhcc
Confidence            3679999999         577775           799999999999875443322 23456677887777654     


Q ss_pred             CCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHh-CCCceecCC
Q 024280          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~-~G~pv~~~~  207 (269)
                      |++++++||+||++|.+ |+++||+|+.+||+||++|||||.+|.+ .++||+++.
T Consensus        80 ~~~~~~~vV~yC~sG~~-Aa~~~~~L~~~G~~~v~vydGsw~eW~~~~~~Pv~~~~  134 (139)
T d1okga2          80 DAADLSSFVFSCGSGVT-ACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRSI  134 (139)
T ss_dssp             --CCCTTSEEECSSSST-HHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHHH
T ss_pred             CCCCCCeEEEECCCcHH-HHHHHHHHHHhCCCCccCCCCCHHHHhCCCCCCeeecC
Confidence            67888999999999986 8899999999999999999999999966 688988753

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.85  E-value=2.1e-21  Score=155.90  Aligned_cols=105  Identities=17%  Similarity=0.284  Sum_probs=90.9

Q ss_pred             CcccHHHHHHhhC-CCCcEEEEeccCCCCCCCCCHhhHhhCC---CCCCeeccccccccccCCCCCCCCCHHHHHHHHHH
Q 024280           76 PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAH---IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (269)
Q Consensus        76 ~lIs~~eL~~~l~-~~~~vIIDvR~~~~~~~~~~~~ey~~gH---IPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~  151 (269)
                      ..||+++++++++ +++++|||||         ...||..+|   |+||+|+|...                 +...+..
T Consensus        23 ~~Isp~e~~~ll~~~~~~~lIDvR---------~~~E~~~~hip~i~~a~~ip~~~-----------------l~~~~~~   76 (137)
T d1qxna_          23 VMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGK-----------------LEPLLAK   76 (137)
T ss_dssp             EEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTT-----------------SHHHHHH
T ss_pred             CEEcHHHHHHHHHcCcCEEEEECC---------cHHHHHHhccccccccccCCccc-----------------ccccccc
Confidence            4799999999985 5679999999         689999999   56688888654                 3456667


Q ss_pred             cCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCC
Q 024280          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (269)
Q Consensus       152 lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~  207 (269)
                      .+++++++|||||.+|.+ |..++.+|+.+||+||++|+||+.+|..+|+|+....
T Consensus        77 ~~~~~~~~ivvyC~~G~r-s~~aa~~L~~~G~~nV~~l~GG~~~W~~~g~P~~~~~  131 (137)
T d1qxna_          77 SGLDPEKPVVVFCKTAAR-AALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS  131 (137)
T ss_dssp             HCCCTTSCEEEECCSSSC-HHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred             cccCcccceeeeecccch-HHHHHHHHHHcCCCcEEEecCHHHHHHHcCCCCCCCC
Confidence            789999999999999886 7889999999999999999999999999999987653

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=1.4e-21  Score=155.28  Aligned_cols=109  Identities=21%  Similarity=0.295  Sum_probs=86.8

Q ss_pred             CcccHHHHHHhhCCCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Q 024280           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lGI~  155 (269)
                      ..|+++||.+++++++++|||||         ...+|..||||||+|+|+..+..             .+.+++..  ..
T Consensus         8 ~~I~~~el~~~~~~~~v~iIDvR---------~~~e~~~ghIpgAinip~~~~~~-------------~~~~~~~~--~~   63 (132)
T d1t3ka_           8 SYITSTQLLPLHRRPNIAIIDVR---------DEERNYDGHIAGSLHYASGSFDD-------------KISHLVQN--VK   63 (132)
T ss_dssp             EEECTTTTTTCCCCTTEEEEEES---------CSHHHHSSCCCSSEEECCSSSST-------------THHHHHHT--CC
T ss_pred             CEECHHHHHHHHhCCCeEEEEcc---------CHHHHHhccCcccceeeeecccc-------------cccccccc--cc
Confidence            46999999999998899999999         57899999999999999887543             23444444  36


Q ss_pred             CCCcEEEeCCCChHHH--------HHHHHHHHHcCCCcEEEccCcHHHHHhCCCceecCCC
Q 024280          156 NKDGLVVYDGKGIFSA--------ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (269)
Q Consensus       156 ~d~~VVvY~~~g~~~A--------~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv~~~~~  208 (269)
                      ++..+|+||..+..++        .++++.|..+||+||++|+||+.+|.++|+|+.+...
T Consensus        64 ~~~~iv~~c~~~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~  124 (132)
T d1t3ka_          64 DKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE  124 (132)
T ss_dssp             SCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred             cccceEEEeccccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHcCCCcccCCC
Confidence            7788999997554322        2334455678999999999999999999999998654

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=3.8e-20  Score=146.93  Aligned_cols=100  Identities=20%  Similarity=0.141  Sum_probs=84.9

Q ss_pred             CcccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHHHHcC
Q 024280           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l~~lG  153 (269)
                      ..|++++++++++++  +.+|||+|         ...+|..||||||+|+|+..+                 ......++
T Consensus        23 ~~I~~~e~~~~l~~~~~~~~liDvR---------~~~e~~~ghipgai~~p~~~~-----------------~~~~~~~~   76 (130)
T d1yt8a4          23 ERLDLAGLAQWQDEHDRTTYLLDVR---------TPEEYEAGHLPGSRSTPGGQL-----------------VQETDHVA   76 (130)
T ss_dssp             EEECHHHHHHHHHCTTSCEEEEECS---------CHHHHHHCBCTTCEECCHHHH-----------------HHSHHHHC
T ss_pred             cccCHHHHHHHHHccCCCEEEEECC---------CcHHHhcCccCCccccccccc-----------------cccccccc
Confidence            469999999998644  47999999         689999999999999997653                 33445567


Q ss_pred             CCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHHHHHhCCCce
Q 024280          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       154 I~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      .+++++|||||.+|.+ |..++..|+.+|| +|++|+||+.+|..++...
T Consensus        77 ~~~~~~ivl~C~~G~r-S~~aa~~L~~~G~-~v~~l~GG~~aw~~~~g~~  124 (130)
T d1yt8a4          77 SVRGARLVLVDDDGVR-ANMSASWLAQMGW-QVAVLDGLSEADFSERGAW  124 (130)
T ss_dssp             CSBTCEEEEECSSSSH-HHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSC
T ss_pred             CCccceEEeecCCCcc-HHHHHHHHHHcCC-CeEEEcCchHHHHHhcCCC
Confidence            8899999999998876 7888899999999 7999999999999887543

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.5e-19  Score=144.37  Aligned_cols=117  Identities=19%  Similarity=0.347  Sum_probs=85.7

Q ss_pred             CCCCcccHHHHHHhhC--CCCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeecccccccc-----ccCCCCCCCCCHHHH
Q 024280           73 PKEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD-----RTTNLPHMLPSEEAF  145 (269)
Q Consensus        73 ~~~~lIs~~eL~~~l~--~~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~-----~~~~~~~~lp~~~~f  145 (269)
                      .....+|++||+++++  +++++|||||         +..+|..||||||+|+++..+..     ........+++.+..
T Consensus        13 ~~~~~~s~e~L~~~l~~~~~~~lilDvR---------~~~ey~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (154)
T d1hzma_          13 EMAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDR   83 (154)
T ss_dssp             CCSSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHH
T ss_pred             cccCccCHHHHHHHHhcCCCCEEEEECC---------CHHHHhcCCCCCCcccCcHHHHhhhccCCcccccccCCcHHHH
Confidence            3456799999999985  4579999999         67999999999999999875321     122344555555554


Q ss_pred             HHHHHHcCCCCCCcEEEeCCCCh------HHHHHHHHHHHHcCC--CcEEEccCcHHHHHhCCCc
Q 024280          146 AAAVSALGLENKDGLVVYDGKGI------FSAARVWWMFRVFGH--DRVWVLDGGLPRWRASGYD  202 (269)
Q Consensus       146 ~~~l~~lGI~~d~~VVvY~~~g~------~~A~ra~~~L~~~G~--~nV~vLdGG~~~W~~~G~p  202 (269)
                      ..+.+   ..+++.||+||..+.      ..+.+++|+++.+|+  .+|++|+||+.+|... ||
T Consensus        84 ~~~~~---~~~~~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~iL~GG~~~w~~~-yp  144 (154)
T d1hzma_          84 DRFTR---RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAE-FS  144 (154)
T ss_dssp             HHHHH---STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCCCEECCCCHHHHHHH-HC
T ss_pred             HHHhh---cCCCCeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhcCCeEEEEeCcHHHHHHH-Ch
Confidence            44433   366788999997643      235677888887765  3899999999999875 54

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.7e-19  Score=140.18  Aligned_cols=110  Identities=18%  Similarity=0.222  Sum_probs=75.9

Q ss_pred             cccHHHHHHhhCCC--CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCC--CCCCCCCHHHHHHHHHHc
Q 024280           77 VVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN--LPHMLPSEEAFAAAVSAL  152 (269)
Q Consensus        77 lIs~~eL~~~l~~~--~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~--~~~~lp~~~~f~~~l~~l  152 (269)
                      .||++||+++++++  +++|||+|         +..+|..||||||+|||...+......  +...++  ....+.+.  
T Consensus         2 ~Is~~eL~~~l~~~~~~~liiDvR---------~~~ey~~~hI~gAinip~~~l~~~~~~~~l~~~~~--~~~~~~~~--   68 (135)
T d2gwfa1           2 AITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLP--DDSKDTWK--   68 (135)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSC--HHHHHHHH--
T ss_pred             eECHHHHHHHHhcCCCCEEEEEec---------CCccccCCccCCeEEeCHHHcccccchhhhhhhhh--HHHHHHHh--
Confidence            48999999998764  59999999         789999999999999998876432111  111111  22233333  


Q ss_pred             CCCCCCcEEEeCCCChHHH----HHHH---HHHH-----HcCCCcEEEccCcHHHHHhC
Q 024280          153 GLENKDGLVVYDGKGIFSA----ARVW---WMFR-----VFGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       153 GI~~d~~VVvY~~~g~~~A----~ra~---~~L~-----~~G~~nV~vLdGG~~~W~~~  199 (269)
                      ...+.+.||+||..+....    ..+.   ..|.     ..|+.+|++|+||+.+|.++
T Consensus        69 ~~~~~~~iV~yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~  127 (135)
T d2gwfa1          69 KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC  127 (135)
T ss_dssp             TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred             ccCCCCeEEEEeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHh
Confidence            3457789999998654321    1122   2222     35788999999999999987

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.2e-17  Score=135.49  Aligned_cols=103  Identities=16%  Similarity=0.152  Sum_probs=75.5

Q ss_pred             CcccHHHHHHhhCC------CCcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHH
Q 024280           76 PVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (269)
Q Consensus        76 ~lIs~~eL~~~l~~------~~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l  149 (269)
                      ..|++++|.+++++      ++++|||||         ...+|..||||||+|+|..+..                .+.+
T Consensus        23 k~Is~~~l~~ll~~~~~~~~~~~~IIDvR---------~~~Ey~~gHI~gAinip~~~~~----------------~~~l   77 (161)
T d1c25a_          23 KYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEEV----------------EDFL   77 (161)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHH----------------HHHT
T ss_pred             CccCHHHHHHHHhhhhhcccCCEEEEECC---------CHHHHHhhhcCCcEEcCcHHHH----------------HHHH
Confidence            46999999999875      268999999         6899999999999999865421                1111


Q ss_pred             H----HcCCCCCCcEEEeCCCChHHHHHHHHHHHH----------cCCCcEEEccCcHHHHHhCCCce
Q 024280          150 S----ALGLENKDGLVVYDGKGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDV  203 (269)
Q Consensus       150 ~----~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~----------~G~~nV~vLdGG~~~W~~~G~pv  203 (269)
                      .    .....+...||+||..+...+.+++..|+.          +||++|++|+||+.+|....-++
T Consensus        78 ~~~~~~~~~~~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~~p~l  145 (161)
T d1c25a_          78 LKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSY  145 (161)
T ss_dssp             TTSCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGG
T ss_pred             hhhhhhhhhccCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHHCcCc
Confidence            1    112244566899997543346777777764          49999999999999998764433

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7.6e-17  Score=133.92  Aligned_cols=104  Identities=16%  Similarity=0.203  Sum_probs=75.0

Q ss_pred             CcccHHHHHHhhCCC------CcEEEEeccCCCCCCCCCHhhHhhCCCCCCeeccccccccccCCCCCCCCCHHHHHHHH
Q 024280           76 PVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (269)
Q Consensus        76 ~lIs~~eL~~~l~~~------~~vIIDvR~~~~~~~~~~~~ey~~gHIPGAi~ip~~~l~~~~~~~~~~lp~~~~f~~~l  149 (269)
                      ..|++++|.+++.++      +++|||||         +..+|..|||+||+|+|...+.....           +....
T Consensus        23 k~Isp~eL~~ll~~~~~~~~~~~lIID~R---------~~~Ey~~gHI~gAiNi~~~~~~~~~~-----------~~~~~   82 (174)
T d1ymka1          23 KYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAESFL-----------LKSPI   82 (174)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHHHHH-----------HTTTC
T ss_pred             cEeCHHHHHHHHhhhhhcccCCEEEEECC---------CchhhhhhhcCCccccCchHHHHHHH-----------HHhhh
Confidence            469999999999753      58999999         68999999999999999875321100           00000


Q ss_pred             HHcCCCCCCcEEEeCCCChHHHHHHHHHHHH----------cCCCcEEEccCcHHHHHhC
Q 024280          150 SALGLENKDGLVVYDGKGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRAS  199 (269)
Q Consensus       150 ~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~----------~G~~nV~vLdGG~~~W~~~  199 (269)
                      .....++...||+||..+...+..++..|+.          .|+++|++|+||+.+|.+.
T Consensus        83 ~~~~~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~  142 (174)
T d1ymka1          83 APCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ  142 (174)
T ss_dssp             CC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred             hhhhhccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHh
Confidence            0011245677999998655557777777764          4999999999999999764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=88.63  E-value=0.45  Score=36.53  Aligned_cols=49  Identities=16%  Similarity=0.269  Sum_probs=39.2

Q ss_pred             HHHHHHHHcCCCCCCcEEEeCCCChHHHHHHHHHHHHcCCCcEEEccCcHH
Q 024280          144 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP  194 (269)
Q Consensus       144 ~f~~~l~~lGI~~d~~VVvY~~~g~~~A~ra~~~L~~~G~~nV~vLdGG~~  194 (269)
                      -|.+.++..++++++.|+|+..+|.  +..+...|...|++++.+++=...
T Consensus         4 G~~~~l~~~~~~~~~~vlIlGaGGa--arai~~aL~~~g~~~I~I~nR~~~   52 (167)
T d1npya1           4 AIVKLIEKYHLNKNAKVIVHGSGGM--AKAVVAAFKNSGFEKLKIYARNVK   52 (167)
T ss_dssp             HHHHHHHHTTCCTTSCEEEECSSTT--HHHHHHHHHHTTCCCEEEECSCHH
T ss_pred             HHHHHHHHcCCCCCCeEEEECCCHH--HHHHHHHHHHCCCCEEEEecccHH
Confidence            3678899999999999999966554  444667899999999999987654

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=81.55  E-value=0.21  Score=37.35  Aligned_cols=25  Identities=12%  Similarity=0.270  Sum_probs=21.1

Q ss_pred             ccCHHHHHHHhh-CCCcEEEccCCCC
Q 024280          244 IWTLEQVKRNIE-EGTYQLVDARSKA  268 (269)
Q Consensus       244 ~~~~~~v~~~l~-~~~~~iiDaRs~~  268 (269)
                      .++.+++++.+. +++.+|||+|+++
T Consensus        24 ~Isp~e~~~ll~~~~~~~lIDvR~~~   49 (137)
T d1qxna_          24 MLSPKDAYKLLQENPDITLIDVRDPD   49 (137)
T ss_dssp             EECHHHHHHHHHHCTTSEEEECCCHH
T ss_pred             EEcHHHHHHHHHcCcCEEEEECCcHH
Confidence            588999999885 5789999999864