Citrus Sinensis ID: 024335

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWEKVRAEKNS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccEEEccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEValeparlnkipvqVQRDLFLVLSRFIFFYNSVDKLESFLkqfpvfpnaflvggsadFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTClysftspggpmyptraVRHAAWDALDflfpvgqyprHVISLFFRLlypwcwpsscwNFIMSWLKAVLHTLLRVVFSSWEKVRAEKNS
Flexible Loop (DISEMBL)
MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFsswekvraekns
Low Complexity Region (SEG)
MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWEKVRAEKNS
Disordered region (IsUnstruct)
******RILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWEK*******
Disordered Region (DISOPRED)
*****QRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSW**V******
Disordered Region (DISEMBL)
MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWE********
Disordered Region (DISPRO)
***SGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWEKVR*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVLHTLLRVVFSSWEKVRAEKNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
225435022	357	PREDICTED: uncharacterized protein LOC10	1.0	0.753	0.828	1e-130
224054823	364	predicted protein [Populus trichocarpa]	0.996	0.736	0.826	1e-128
18424303	359	uncharacterized protein [Arabidopsis tha	0.973	0.729	0.801	1e-124
21537130	359	unknown [Arabidopsis thaliana]	0.973	0.729	0.801	1e-124
297796947	359	hypothetical protein ARALYDRAFT_496133 [	0.973	0.729	0.801	1e-124
357472745	358	hypothetical protein MTR_4g063570 [Medic	0.996	0.748	0.776	1e-123
363807874	358	uncharacterized protein LOC100815374 [Gl	0.988	0.743	0.770	1e-121
224104479	359	predicted protein [Populus trichocarpa]	0.981	0.735	0.796	1e-120
297788302	363	predicted protein [Arabidopsis lyrata su	0.951	0.705	0.792	1e-120
449462625	358	PREDICTED: uncharacterized protein LOC10	0.996	0.748	0.750	1e-117

>gi|225435022|ref|XP_002284193.1| PREDICTED: uncharacterized protein LOC100260346 [Vitis vinifera] gi|297746114|emb|CBI16170.3| unnamed protein product [Vitis vinifera]

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/269 (82%), Positives = 246/269 (91%)

Query: 1   MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFW 60
           +PE+G+ ILDLIVQLWSQLF SHIFALLFHKW+FEVQL N EVL RYSSALVQGATNVFW
Sbjct: 89  VPENGKSILDLIVQLWSQLFASHIFALLFHKWLFEVQLENSEVLFRYSSALVQGATNVFW 148

Query: 61  IDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFL 120
           IDIQTN+  FQSLFRYLLEEVAL P RLNKI  Q QRDL+L+LSRFIFFYN VDKLESFL
Sbjct: 149 IDIQTNTMRFQSLFRYLLEEVALVPTRLNKIAPQAQRDLYLLLSRFIFFYNFVDKLESFL 208

Query: 121 KQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLK 180
           K+FP+FPN+FL GG AD FVIE+ADQLQKLKVEPVL+HYLSQIKVLQG+ELRMTTSTRLK
Sbjct: 209 KEFPIFPNSFLAGGPADIFVIELADQLQKLKVEPVLVHYLSQIKVLQGLELRMTTSTRLK 268

Query: 181 TCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNF 240
            CLYSFTSPGGPMYPTR VRHAAW+ALDFLFPVG+YPRH+ISLFFRLLYPW WPSSCWNF
Sbjct: 269 ACLYSFTSPGGPMYPTRIVRHAAWEALDFLFPVGRYPRHLISLFFRLLYPWYWPSSCWNF 328

Query: 241 IMSWLKAVLHTLLRVVFSSWEKVRAEKNS 269
           IMS +KAVL++LLR++FSS EK+R  KN+
Sbjct: 329 IMSCIKAVLYSLLRLIFSSLEKLRRPKNA 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054823|ref|XP_002298370.1| predicted protein [Populus trichocarpa] gi|222845628|gb|EEE83175.1| predicted protein [Populus trichocarpa]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 224/271 (82%), Positives = 249/271 (91%), Gaps = 3/271 (1%)

Query: 1   MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFW 60
           +PESG++IL LIVQLWSQ F SHIF+LLFHKW+FE QL+N EVL+R+SSALVQGATNV W
Sbjct: 93  VPESGKQILHLIVQLWSQSFASHIFSLLFHKWLFEAQLDNTEVLVRFSSALVQGATNVLW 152

Query: 61  IDIQTNSRHFQSLFR--YLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLES 118
           IDIQTN RHFQSLF+  YLLEEVALEP RLN+IPVQ QR+LFL+LSRFI FYNSVDK++S
Sbjct: 153 IDIQTNKRHFQSLFQASYLLEEVALEPMRLNRIPVQAQRELFLLLSRFILFYNSVDKIDS 212

Query: 119 FLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQG-MELRMTTST 177
           FLKQFP+FPNAFLVGG ADFFVIE+ADQLQKLKVEPVLLHYLSQIKVLQG MELRMTTST
Sbjct: 213 FLKQFPIFPNAFLVGGPADFFVIELADQLQKLKVEPVLLHYLSQIKVLQGGMELRMTTST 272

Query: 178 RLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSC 237
           RLK CLYSFTSPGGPMYPTRAVRHAAWDALD LFPVG+YPRH ISLFFRLLYPW WPSSC
Sbjct: 273 RLKACLYSFTSPGGPMYPTRAVRHAAWDALDLLFPVGRYPRHFISLFFRLLYPWYWPSSC 332

Query: 238 WNFIMSWLKAVLHTLLRVVFSSWEKVRAEKN 268
           WNFI+S +KAV ++LLR++FSSW+K+R  KN
Sbjct: 333 WNFIISCIKAVFYSLLRLLFSSWDKLREPKN 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424303|ref|NP_568917.1| uncharacterized protein [Arabidopsis thaliana] gi|332009876|gb|AED97259.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/262 (80%), Positives = 239/262 (91%)

Query: 3   ESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWID 62
           E G+ ILDL+VQLWSQ F SHIF+LLFHKW+FEV+L+N E+LLRYSSALVQGATNVFWID
Sbjct: 96  ERGKDILDLMVQLWSQSFASHIFSLLFHKWLFEVELDNQEILLRYSSALVQGATNVFWID 155

Query: 63  IQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQ 122
           IQTN+R FQSLFRYLLEEVALE  RL KIP+Q QR+L+L+LSRFIFFYNSVDKL+SFL+ 
Sbjct: 156 IQTNTRRFQSLFRYLLEEVALEQIRLKKIPIQAQRELYLLLSRFIFFYNSVDKLDSFLRN 215

Query: 123 FPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTC 182
           FP FPNAFL+GG  DF VIE+ DQLQKLKVEPVLLHYLSQ+K+LQGMELRMTTSTRLK C
Sbjct: 216 FPEFPNAFLIGGPGDFLVIELTDQLQKLKVEPVLLHYLSQMKILQGMELRMTTSTRLKAC 275

Query: 183 LYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIM 242
           LYSFTSPGGPMYPTRAVRHAAWDALD LFPVG+YPRH+ISLFFRLLYPW WPSSCWNF++
Sbjct: 276 LYSFTSPGGPMYPTRAVRHAAWDALDSLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVV 335

Query: 243 SWLKAVLHTLLRVVFSSWEKVR 264
           S +KAVL++++R++FS  EK R
Sbjct: 336 SCIKAVLYSIVRLIFSRREKPR 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537130|gb|AAM61471.1| unknown [Arabidopsis thaliana]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/262 (80%), Positives = 239/262 (91%)

Query: 3   ESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWID 62
           E G+ ILDL+VQLWSQ F SHIF+LLFHKW+FEV+L+N E+LLRYSSALVQGATNVFWID
Sbjct: 96  ERGKDILDLMVQLWSQSFASHIFSLLFHKWLFEVELDNQEILLRYSSALVQGATNVFWID 155

Query: 63  IQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQ 122
           IQTN+R FQSLFRYLLEEVALE  RL KIP+Q QR+L+L+LSRFIFFYNSVDKL+SFL+ 
Sbjct: 156 IQTNTRRFQSLFRYLLEEVALEQIRLKKIPIQAQRELYLLLSRFIFFYNSVDKLDSFLRN 215

Query: 123 FPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTC 182
           FP FPNAFL+GG  DF VIE+ DQLQKLKVEPVLLHYLSQ+K+LQGMELRMTTSTRLK C
Sbjct: 216 FPEFPNAFLIGGPGDFLVIELTDQLQKLKVEPVLLHYLSQMKILQGMELRMTTSTRLKAC 275

Query: 183 LYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIM 242
           LYSFTSPGGPMYPTRAVRHAAWDALD LFPVG+YPRH+ISLFFRLLYPW WPSSCWNF++
Sbjct: 276 LYSFTSPGGPMYPTRAVRHAAWDALDSLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVV 335

Query: 243 SWLKAVLHTLLRVVFSSWEKVR 264
           S +KAVL++++R++FS  EK R
Sbjct: 336 SCIKAVLYSIVRLIFSRREKPR 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796947|ref|XP_002866358.1| hypothetical protein ARALYDRAFT_496133 [Arabidopsis lyrata subsp. lyrata] gi|297312193|gb|EFH42617.1| hypothetical protein ARALYDRAFT_496133 [Arabidopsis lyrata subsp. lyrata]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/262 (80%), Positives = 238/262 (90%)

Query: 3   ESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWID 62
           E G+ ILDL+VQLWSQ F SHIF+LLFHKW+FEV+L N E+LLRYSSALVQGATNVFWID
Sbjct: 96  ERGKDILDLMVQLWSQSFASHIFSLLFHKWLFEVELENQEILLRYSSALVQGATNVFWID 155

Query: 63  IQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQ 122
           IQTN+R FQSLFRYLLEEVALE  RL KIP+Q QR+L+L+LSRFIFFYNSVDKL+SFL+ 
Sbjct: 156 IQTNTRRFQSLFRYLLEEVALEQMRLKKIPIQAQRELYLLLSRFIFFYNSVDKLDSFLRN 215

Query: 123 FPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTC 182
           FP FPNAFL+GG  DF VIE+ DQLQKLKVEPVLLHYLSQ+K+LQGMELRMTTSTRLK C
Sbjct: 216 FPEFPNAFLIGGPGDFLVIELTDQLQKLKVEPVLLHYLSQMKILQGMELRMTTSTRLKAC 275

Query: 183 LYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIM 242
           LYSFTSPGGPMYPTRAVRHAAWDALD LFPVG+YPRH+ISLFFRLLYPW WPSSCWNF++
Sbjct: 276 LYSFTSPGGPMYPTRAVRHAAWDALDSLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVV 335

Query: 243 SWLKAVLHTLLRVVFSSWEKVR 264
           S +KAVL++++R++FS  EK R
Sbjct: 336 SCIKAVLYSIVRLIFSRREKPR 357

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357472745|ref|XP_003606657.1| hypothetical protein MTR_4g063570 [Medicago truncatula] gi|355507712|gb|AES88854.1| hypothetical protein MTR_4g063570 [Medicago truncatula]

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/268 (77%), Positives = 241/268 (89%)

Query: 1   MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFW 60
           +PESG+ +LD+IVQLWSQ F SHIF+LLFHKW+FEV L+N EVLLRYSSALVQGATNVFW
Sbjct: 90  VPESGKPVLDMIVQLWSQSFASHIFSLLFHKWMFEVHLDNPEVLLRYSSALVQGATNVFW 149

Query: 61  IDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFL 120
           IDIQTN+R FQS+FRYLL++VAL+  RLNKIP+Q QRD++L+LSRFI FYNS  K++SFL
Sbjct: 150 IDIQTNTRRFQSIFRYLLDDVALDHTRLNKIPLQAQRDMYLLLSRFILFYNSAGKVDSFL 209

Query: 121 KQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLK 180
           KQ PVF  AFLVGG AD FV E+ DQLQKLKVEPVLLHYLS+IKVLQGMELRMTTSTRLK
Sbjct: 210 KQCPVFQTAFLVGGPADIFVNELTDQLQKLKVEPVLLHYLSEIKVLQGMELRMTTSTRLK 269

Query: 181 TCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNF 240
           TCLYSFTSPGGPMYPTRAVRHAAW++LDFLFPVGQYPRH+ISLFFRLLYPW WPSSCWNF
Sbjct: 270 TCLYSFTSPGGPMYPTRAVRHAAWESLDFLFPVGQYPRHLISLFFRLLYPWYWPSSCWNF 329

Query: 241 IMSWLKAVLHTLLRVVFSSWEKVRAEKN 268
           ++S ++ + ++LLR++FS+WEKV   K 
Sbjct: 330 VISCVRTIFYSLLRLIFSTWEKVSKPKT 357

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807874|ref|NP_001241933.1| uncharacterized protein LOC100815374 [Glycine max] gi|255645052|gb|ACU23025.1| unknown [Glycine max]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/266 (77%), Positives = 236/266 (88%)

Query: 3   ESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWID 62
           ESG+ ILDLIVQLWSQ F SHIFALLFHKW+FEV L+N EVLLRYSSALVQGATNVFWID
Sbjct: 92  ESGKPILDLIVQLWSQSFASHIFALLFHKWLFEVHLDNPEVLLRYSSALVQGATNVFWID 151

Query: 63  IQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQ 122
           IQTN+R FQSLFRYLLE+V L+  RLNK+P Q QRD++L+LSRFI FYN  DK++SFLKQ
Sbjct: 152 IQTNTRRFQSLFRYLLEDVGLDHTRLNKVPFQAQRDMYLLLSRFILFYNKADKIDSFLKQ 211

Query: 123 FPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTC 182
            P FP AFL+GG AD FV E+ DQLQKLKVEPVLLHYLS+IK+LQGMELRMTTSTRLKTC
Sbjct: 212 CPAFPTAFLIGGPADIFVTELTDQLQKLKVEPVLLHYLSEIKILQGMELRMTTSTRLKTC 271

Query: 183 LYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIM 242
           LYSFTSPGGPMYPTRAVRHAAW+ALD LFPVG+YPRH+ISLFFRLLYPW WPSSCWNF++
Sbjct: 272 LYSFTSPGGPMYPTRAVRHAAWEALDLLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVI 331

Query: 243 SWLKAVLHTLLRVVFSSWEKVRAEKN 268
           S ++AV +++L  +FS+W+K+   K+
Sbjct: 332 SCIQAVFYSVLGFIFSTWDKIAKPKS 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104479|ref|XP_002313449.1| predicted protein [Populus trichocarpa] gi|222849857|gb|EEE87404.1| predicted protein [Populus trichocarpa]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/266 (79%), Positives = 237/266 (89%), Gaps = 2/266 (0%)

Query: 1   MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFW 60
           +PESG++IL LI+QLWSQ F SHIF LLFHKW+FE QL+N EVLLR+SSALVQGATNVFW
Sbjct: 93  VPESGKQILHLILQLWSQSFASHIFFLLFHKWLFEAQLDNTEVLLRFSSALVQGATNVFW 152

Query: 61  IDIQTNSRHFQSLFR--YLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLES 118
           IDIQTN+R FQSLF+  YLL+EVAL P +LNKIPVQ QR+LFL+LSRF  FYNS      
Sbjct: 153 IDIQTNTRRFQSLFQASYLLDEVALAPMQLNKIPVQAQRELFLLLSRFTLFYNSGKLSNF 212

Query: 119 FLKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTR 178
           FLKQFPVF NAFLVGG ADFFVIEVADQLQKLKVEPVLLHYLS IKVLQG+ELRMTTSTR
Sbjct: 213 FLKQFPVFLNAFLVGGPADFFVIEVADQLQKLKVEPVLLHYLSHIKVLQGLELRMTTSTR 272

Query: 179 LKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCW 238
           LK CLYSFTSPGGPMYPTRAVRHAAWD+LD LFPVGQYPRH+IS FFRLLYPWCWPSSCW
Sbjct: 273 LKACLYSFTSPGGPMYPTRAVRHAAWDSLDLLFPVGQYPRHLISFFFRLLYPWCWPSSCW 332

Query: 239 NFIMSWLKAVLHTLLRVVFSSWEKVR 264
           +FI+S +KAV ++LL ++FSSW+K+R
Sbjct: 333 SFIISCIKAVFYSLLGLLFSSWDKLR 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297788302|ref|XP_002862281.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297307623|gb|EFH38539.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/256 (79%), Positives = 231/256 (90%)

Query: 3   ESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWID 62
           E G+ ILDL+VQLWSQ F SHIF+LLFHKW+FEV+L N E+LLRYSSALVQGATNVFWID
Sbjct: 99  ERGKDILDLMVQLWSQSFASHIFSLLFHKWLFEVELENQEILLRYSSALVQGATNVFWID 158

Query: 63  IQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQ 122
           IQTN+R FQSLFRYLLEEVALE  RL KIP+Q QR+L+L+LSRFIFFYNSVDKL+SFL+ 
Sbjct: 159 IQTNTRRFQSLFRYLLEEVALEQMRLKKIPIQAQRELYLLLSRFIFFYNSVDKLDSFLRN 218

Query: 123 FPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTC 182
           FP FPNAFL+GG  DF VIE+ DQLQKLKVEPVLLHYLSQ+K+LQGMELRMTTSTRLK C
Sbjct: 219 FPEFPNAFLIGGPGDFLVIELTDQLQKLKVEPVLLHYLSQMKILQGMELRMTTSTRLKAC 278

Query: 183 LYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIM 242
           LYSFTSPGGPMYPTRAVRHAAWDALD LFPVG+YPRH+ISLFFRLLYPW WPSSCWNF++
Sbjct: 279 LYSFTSPGGPMYPTRAVRHAAWDALDSLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVV 338

Query: 243 SWLKAVLHTLLRVVFS 258
                +L++++R++FS
Sbjct: 339 LASTTLLYSIVRLIFS 354

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462625|ref|XP_004149041.1| PREDICTED: uncharacterized protein LOC101221721 [Cucumis sativus] gi|449512817|ref|XP_004164148.1| PREDICTED: uncharacterized protein LOC101231975 [Cucumis sativus]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/269 (75%), Positives = 236/269 (87%), Gaps = 1/269 (0%)

Query: 1   MPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQL-NNDEVLLRYSSALVQGATNVF 59
           +PESG+ ILDLIV+LWSQ F  HIF LLFHKW+FE+++ N++EV LR SSALVQGATN+F
Sbjct: 89  VPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIENSEEVHLRNSSALVQGATNIF 148

Query: 60  WIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESF 119
           W+DIQ N+  F+SLF YLLEEV+ +PARLNKIP+QVQRDLFL+LSRF+ FY+S DKLESF
Sbjct: 149 WLDIQANTTRFKSLFHYLLEEVSFQPARLNKIPIQVQRDLFLLLSRFLIFYDSDDKLESF 208

Query: 120 LKQFPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRL 179
           LKQFP FPNA LVGG AD FVIE+ DQ+QKLKVEPVLLHYLS++ VLQGMELRMTTSTRL
Sbjct: 209 LKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLHYLSRLIVLQGMELRMTTSTRL 268

Query: 180 KTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWN 239
           KTCLYSFTSPGGPMYPTRAVRHAAWDALD LFPVG+YPRH+ISLFFRLLYPW WPSSCWN
Sbjct: 269 KTCLYSFTSPGGPMYPTRAVRHAAWDALDLLFPVGRYPRHLISLFFRLLYPWYWPSSCWN 328

Query: 240 FIMSWLKAVLHTLLRVVFSSWEKVRAEKN 268
           F++S ++AV  +L R++FS +E     K+
Sbjct: 329 FVISCIRAVFLSLFRLIFSRFENPNQHKS 357

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
TAIR|locus:2168158	359	AT5G59960 "AT5G59960" [Arabido	0.973	0.729	0.801	5.6e-116

TAIR|locus:2168158 AT5G59960 "AT5G59960" [Arabidopsis thaliana (taxid:3702)]

 Score = 1143 (407.4 bits), Expect = 5.6e-116, P = 5.6e-116
 Identities = 210/262 (80%), Positives = 239/262 (91%)

Query:     3 ESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSALVQGATNVFWID 62
             E G+ ILDL+VQLWSQ F SHIF+LLFHKW+FEV+L+N E+LLRYSSALVQGATNVFWID
Sbjct:    96 ERGKDILDLMVQLWSQSFASHIFSLLFHKWLFEVELDNQEILLRYSSALVQGATNVFWID 155

Query:    63 IQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLFLVLSRFIFFYNSVDKLESFLKQ 122
             IQTN+R FQSLFRYLLEEVALE  RL KIP+Q QR+L+L+LSRFIFFYNSVDKL+SFL+ 
Sbjct:   156 IQTNTRRFQSLFRYLLEEVALEQIRLKKIPIQAQRELYLLLSRFIFFYNSVDKLDSFLRN 215

Query:   123 FPVFPNAFLVGGSADFFVIEVADQLQKLKVEPVLLHYLSQIKVLQGMELRMTTSTRLKTC 182
             FP FPNAFL+GG  DF VIE+ DQLQKLKVEPVLLHYLSQ+K+LQGMELRMTTSTRLK C
Sbjct:   216 FPEFPNAFLIGGPGDFLVIELTDQLQKLKVEPVLLHYLSQMKILQGMELRMTTSTRLKAC 275

Query:   183 LYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIM 242
             LYSFTSPGGPMYPTRAVRHAAWDALD LFPVG+YPRH+ISLFFRLLYPW WPSSCWNF++
Sbjct:   276 LYSFTSPGGPMYPTRAVRHAAWDALDSLFPVGRYPRHLISLFFRLLYPWYWPSSCWNFVV 335

Query:   243 SWLKAVLHTLLRVVFSSWEKVR 264
             S +KAVL++++R++FS  EK R
Sbjct:   336 SCIKAVLYSIVRLIFSRREKPR 357


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.140   0.448    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      269       269   0.00096  114 3  11 22  0.37    33
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  216 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.03u 0.16s 21.19t   Elapsed:  00:00:01
  Total cpu time:  21.03u 0.16s 21.19t   Elapsed:  00:00:01
  Start:  Fri May 10 01:11:22 2013   End:  Fri May 10 01:11:23 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00