Citrus Sinensis ID: 024337

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MQPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE
Secondary Structure (PSIPRED)
cccccccEEEEEEEccccccccccEEEEccccEEEEEEcccccEEccccccccHHHcccccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEcccccccHHHHHHHHcccccEEEEcccccHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHccEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEHHHcccHHHHHHHHccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
cccEEccEEEEEEEccccccccccEEEEccccEEEEEEcccccEEcccccccHHHHHHHcccccHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccHHEccHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHcccccEEEEHHHEccccccccccHHHHHHHHHHHHEcEEEEEcHHHHHHHHHHHHHHHHHcccEEEEEEHHHHHHHcHHHHHHHHccccccEEEEEEccc
Coil and Loop (DISEMBL)
mqpisgygvakvldsenpefskgdlvwgmtgweeyslitapylfkiqhtdvplsyytgilgmpgmtAYVGFYEVcsakhgecvfisaasGAVGQLVGQFAKLLGCYvvgsagskdkVDLLKnkfgfdeafnYKEEADLNAALKRYFPEGIDVYFenvggktldavlpnmkiRGRIAACGMisqynldkpegvHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIphikegklVYVEDMAEGLESAPAALIGLfsgqnvgkqvvavape
Flexible Loop (DISEMBL)
mqpisgygvakvldsenpefSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE
Low Complexity Region (SEG)
MQPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE
Disordered region (IsUnstruct)
*******************FSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV*****
Disordered Region (DISOPRED)
MQPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA**
Disordered Region (DISEMBL)
MQPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE
Disordered Region (DISPRO)
*QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	269	2.2.26 [Sep-21-2011]
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.988	0.777	0.705	1e-114
Q39173	343	NADP-dependent alkenal do	yes	no	0.996	0.781	0.722	1e-114
Q39172	345	NADP-dependent alkenal do	no	no	0.996	0.776	0.711	1e-113
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.988	0.762	0.450	3e-55
O34812	339	Putative NADP-dependent o	yes	no	0.977	0.775	0.426	3e-53
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.955	0.781	0.460	1e-52
P97584	329	Prostaglandin reductase 1	yes	no	0.959	0.784	0.446	4e-52
Q9EQZ5	329	Prostaglandin reductase 1	yes	no	0.962	0.787	0.449	1e-51
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.959	0.784	0.443	2e-51
P76113	345	NADPH-dependent curcumin	N/A	no	0.966	0.753	0.405	2e-50

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  411 bits (1056), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 189/268 (70%), Positives = 235/268 (87%), Gaps = 2/268 (0%)

Query: 4   ISGYGVAKVLDSENPEFSKGDLVWG-MTGWEEYSLITAPY-LFKIQHTDVPLSYYTGILG 61
           I  YGV+KVLDS +P + KG+L+WG   GWEEY+LI  PY LFKIQ  DVPLSYY GILG
Sbjct: 75  IVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQDKDVPLSYYVGILG 134

Query: 62  MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
           MPGMTAY GF+E+CS K GE VF++AA+G+VGQLVGQFAK+ GCYVVGSAGSK+KVDLLK
Sbjct: 135 MPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLK 194

Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
           NKFGFD+AFNYKEE+D + ALKR+FPEGID+YF+NVGGK L+AV+ NM++ GRIA CGM+
Sbjct: 195 NKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMV 254

Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE 241
           SQY+L +PEGVHNL+ L+ K++RM+GF+V+D+YHLYPKFLEM++P IKEGK+ YVED++E
Sbjct: 255 SQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISE 314

Query: 242 GLESAPAALIGLFSGQNVGKQVVAVAPE 269
           GLESAP+AL+G++ G+NVG QVVAV+ E
Sbjct: 315 GLESAPSALLGVYVGRNVGNQVVAVSRE 342

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.
Mentha piperita (taxid: 34256)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 8EC: 1

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/270 (72%), Positives = 233/270 (86%), Gaps = 2/270 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT--APYLFKIQHTDVPLSYYTGI 59
           +PI GYGV++V++S +P++ KGDL+WG+ GWEEYS+IT  A   FKIQHTDVPLSYYTG+
Sbjct: 74  KPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGL 133

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDL
Sbjct: 134 LGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDL 193

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           LK KFGFD+AFNYKEE+DL+AALKR FP+GID+YFENVGGK LDAVL NM   GRIA CG
Sbjct: 194 LKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCG 253

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
           MISQYNL+  EGVHNL  ++ KR+R++GF+V D Y  YPKFLE+++P IKEGK+ YVED+
Sbjct: 254 MISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDV 313

Query: 240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           A+GLE AP AL+GLF G+NVGKQVV +A E
Sbjct: 314 ADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  408 bits (1049), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/270 (71%), Positives = 228/270 (84%), Gaps = 2/270 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT--APYLFKIQHTDVPLSYYTGI 59
           QPI GYGV+++++S +P++ KGDL+WG+  WEEYS+IT      FKIQHTDVPLSYYTG+
Sbjct: 76  QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           LK KFGFD+AFNYKEE+DL AALKR FP GID+YFENVGGK LDAVL NM + GRIA CG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
           MISQYNL+  EGVHNL  ++ KR+R++GF+V D Y  Y KFLE ++PHI+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315

Query: 240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           A+GLE AP AL+GLF G+NVGKQVV VA E
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  215 bits (547), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/273 (45%), Positives = 169/273 (61%), Gaps = 7/273 (2%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTD----VPLSYYT 57
           +P     VAKV+ S   ++  G  V  ++GWEEY+ ++   L  +Q  +    +PL  + 
Sbjct: 79  KPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFVSKQALGFLQPINNPYKLPLIDFV 138

Query: 58  GILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
           G LGMP  TAY G   +   K GE ++ISAASGAVGQ+ GQ AK +G +VVGS GS +K 
Sbjct: 139 GSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKF 198

Query: 118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAA 177
            +  +  G+D  FNYK+E+   A L R  P+GID+YFENVGG+T+DAVL NM ++GRI  
Sbjct: 199 KICLDS-GYDSVFNYKKESPFKA-LPRLCPKGIDIYFENVGGETMDAVLENMNLQGRIIF 256

Query: 178 CGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYP-KFLEMIIPHIKEGKLVYV 236
           CG ISQYN   P  V NL  ++ K L ++GFIV +    Y  ++ E +   I EGK+ Y 
Sbjct: 257 CGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQYQEQYFEEMPKLIAEGKIKYK 316

Query: 237 EDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
            D+ +GLESAP A IG+  G+N GK +V +A E
Sbjct: 317 CDVYDGLESAPEAFIGMLQGKNSGKTIVKIADE 349

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  208 bits (530), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/267 (42%), Positives = 158/267 (59%), Gaps = 4/267 (1%)

Query: 4   ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMP 63
           +SG  +A+V+ S+     KGD+V G   W+E+S ++   L KI  +  P S Y GILGM 
Sbjct: 71  LSGGVIAEVV-SDGNHLKKGDIVIGNLSWQEFSAVSESALRKIDTSLAPASAYLGILGMT 129

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
           G+TAY G  ++   K GE V +S A+GAVG  VGQ AK+ G  VVG AGS +K+D LK +
Sbjct: 130 GLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLKQE 189

Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
             FDEA NYK   D+  AL+   P+G+DVYF+NVGG   DAV+  +    RI  CG IS 
Sbjct: 190 LQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVCGAISS 249

Query: 184 YNLDKPE---GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           YN +      G      L+  +  M+GFIV D+   + +  + +   +K GKL Y E + 
Sbjct: 250 YNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEWLKAGKLHYEETIT 309

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVA 267
           EG E+ P A +GLF G+N GKQ++ V+
Sbjct: 310 EGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  206 bits (525), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/265 (46%), Positives = 165/265 (62%), Gaps = 8/265 (3%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFK--IQHTD-VPLSYYTGILGM 62
           G  VA+V++S+N  F KG +V  + GW  +S+     L K  ++  D +PLS   G +GM
Sbjct: 65  GEQVARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVEWPDKLPLSLALGTVGM 124

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  ++C  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +KV  LK 
Sbjct: 125 PGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK- 183

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           K GFD AFNYK    L  AL+   P+G D YF+NVGG+  +AV+  MK  GRIA CG IS
Sbjct: 184 KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVILQMKTFGRIAICGAIS 243

Query: 183 QYNLDK--PEGVHNLMYLVSKRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDM 239
           QYN     P+G    + ++ ++LRMEGFIV      +  K L  ++  + EGK+   E +
Sbjct: 244 QYNRTGPCPQGPAPEV-VIYQQLRMEGFIVNRWQGEVRQKALTELMNWVSEGKVQCHEYV 302

Query: 240 AEGLESAPAALIGLFSGQNVGKQVV 264
            EG E  PAA +G+  G+N+GK +V
Sbjct: 303 TEGFEKMPAAFMGMLKGENLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 159/264 (60%), Gaps = 6/264 (2%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQH---TDVPLSYYTGILGM 62
           G  VA+V++S+N  F  G +V  + GW  +S+     L K+       +PLS   G +GM
Sbjct: 65  GEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPDKLPLSLALGTVGM 124

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  ++C  K GE V ++AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK 
Sbjct: 125 PGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK- 183

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           K GFD AFNYK    L  AL+   P+G D YF+NVGG+  + V+  MK  GRIA CG IS
Sbjct: 184 KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVILQMKTFGRIAICGAIS 243

Query: 183 QYNLDKP-EGVHNLMYLVSKRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           QYN   P     +   ++ ++LRMEGFIV      +  K L  ++  + EGK+ Y E + 
Sbjct: 244 QYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKALTDLMNWVSEGKIRYHEYIT 303

Query: 241 EGLESAPAALIGLFSGQNVGKQVV 264
           EG E  PAA +G+  G N+GK +V
Sbjct: 304 EGFEKMPAAFMGMLKGDNLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1

 Score =  203 bits (516), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/265 (44%), Positives = 162/265 (61%), Gaps = 6/265 (2%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGM 62
           G  VA+V++S+N  F  G +V   +GW  + +     L K+       +PLS   G +GM
Sbjct: 65  GQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGM 124

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  EVC  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK 
Sbjct: 125 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK- 183

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           + GFD AFNYK    L  ALK+  P+G D YF+NVGG+ L+ VL  MK  G+IA CG IS
Sbjct: 184 QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAIS 243

Query: 183 QYN-LDKPEGVHNLMYLVSKRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
            YN +D+     +   ++ K+LR+EGFIV      +  K L  ++  + EGK+ Y E + 
Sbjct: 244 VYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVT 303

Query: 241 EGLESAPAALIGLFSGQNVGKQVVA 265
           +G E+ PAA I + +G N+GK VV 
Sbjct: 304 KGFENMPAAFIEMLNGANLGKAVVT 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  202 bits (515), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 156/264 (59%), Gaps = 6/264 (2%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKI---QHTDVPLSYYTGILGM 62
           G  VA+V++S+N  F  G +V   +GW  +S+     L K+       +PLS   G +GM
Sbjct: 65  GEQVARVVESKNSAFPTGTIVLAPSGWTTHSISNGEKLEKVLAEWPDTLPLSLALGTVGM 124

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  ++C  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +KV  LK 
Sbjct: 125 PGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAWLK- 183

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           K GFD A NYK    L  ALK   PEG D YF+NVGG+  +  +  MK  GRIA CG IS
Sbjct: 184 KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAITQMKKFGRIAICGAIS 243

Query: 183 QYNLDKPEGV-HNLMYLVSKRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
            YN   P     +   ++ K L ++GF+V      +  K L  ++  + EGK+ Y E + 
Sbjct: 244 VYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKALRDLLKWVSEGKIQYHEHVT 303

Query: 241 EGLESAPAALIGLFSGQNVGKQVV 264
           EG E+ PAA IGL  G+N+GK +V
Sbjct: 304 EGFENMPAAFIGLLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score =  199 bits (505), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/269 (40%), Positives = 159/269 (59%), Gaps = 9/269 (3%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKI-QHTDVPLSYYTGILGMPG 64
           G  V++V++S +P++  GD V G +GW++Y + +   L K+  H   P S+  G+LGMPG
Sbjct: 76  GGTVSRVVESNHPDYQSGDWVLGYSGWQDYDISSGDDLVKLGDHPQNP-SWSLGVLGMPG 134

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
            TAY+G  ++   K GE + ++AA+G VG  VGQ  KL GC VVG AG  +K        
Sbjct: 135 FTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVL 194

Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
           GFD   ++  + D    L +  P+GID+Y+ENVGGK  DAVLP +    RI  CG++S Y
Sbjct: 195 GFDVCLDHHAD-DFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSY 253

Query: 185 NLDK-PEGVHNLMYLVS----KRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEGKLVYVED 238
           N  + P G   L  L++    KR+R++GFI+   Y H   +F   +   +KE K+ Y E+
Sbjct: 254 NATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYREE 313

Query: 239 MAEGLESAPAALIGLFSGQNVGKQVVAVA 267
           + +GLE+AP   IGL  G+N GK V+ VA
Sbjct: 314 ITDGLENAPQTFIGLLKGKNFGKVVIRVA 342

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
225434189	345	PREDICTED: NADP-dependent alkenal double	0.996	0.776	0.802	1e-124
308943732	347	alcohol dehydrogenase [Camellia sinensis	0.996	0.772	0.795	1e-123
224117858	348	predicted protein [Populus trichocarpa]	0.996	0.770	0.776	1e-122
444302246	351	Chain A, X-ray Crystal Structure Of A Do	0.992	0.760	0.787	1e-122
6692816	343	allyl alcohol dehydrogenase [Nicotiana t	0.996	0.781	0.784	1e-122
224117874	348	predicted protein [Populus trichocarpa]	0.996	0.770	0.776	1e-121
225434197	345	PREDICTED: NADP-dependent alkenal double	0.988	0.771	0.794	1e-121
342898881	352	ketone/zingerone synthase 2 [Rubus idaeu	0.992	0.758	0.770	1e-119
342898879	348	ketone/zingerone synthase 1 [Rubus idaeu	0.996	0.770	0.762	1e-119
147792340	364	hypothetical protein VITISV_043826 [Viti	0.988	0.730	0.782	1e-119

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/269 (80%), Positives = 242/269 (89%), Gaps = 1/269 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITA-PYLFKIQHTDVPLSYYTGIL 60
            PI+GYGVAKVLDS +P+F  GDLVWG+TGWEEYSLIT    LFKIQHTDVPLSYYTGIL
Sbjct: 77  SPITGYGVAKVLDSRHPDFRTGDLVWGITGWEEYSLITTDERLFKIQHTDVPLSYYTGIL 136

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           GM GMTAY GFYE+CS K GE VFISAASGAVGQLVGQFAKLLGCYVVGSAG+K+KVDLL
Sbjct: 137 GMAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFAKLLGCYVVGSAGTKEKVDLL 196

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           KNKFGFDEAFNYKEE DL A LKRYFPEGID+YFENVGGK LDAVL NM++ GRIA CGM
Sbjct: 197 KNKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFENVGGKMLDAVLVNMRLHGRIAVCGM 256

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           ISQYNL++PEGV NL  +V+KR+RMEGF+V D+YHLYPKFL++I+P+I+EGK+VYVED+A
Sbjct: 257 ISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKFLDLIMPYIREGKIVYVEDIA 316

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           EGLESAP ALIGL+SG+NVGKQVV VA E
Sbjct: 317 EGLESAPTALIGLYSGRNVGKQVVVVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/269 (79%), Positives = 241/269 (89%), Gaps = 1/269 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP-YLFKIQHTDVPLSYYTGIL 60
            PI+G+GVA+VLDS +P F KGDL+WG TGWEEY++IT P  +FKIQ+TDVPLSYYTGIL
Sbjct: 79  SPITGFGVARVLDSGHPNFKKGDLIWGRTGWEEYTIITEPANVFKIQNTDVPLSYYTGIL 138

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           GM GMTAYVGFYE+CS K G+ VFISAASGAVGQLVGQFAKLLGCYVVGSAG+K+KVDLL
Sbjct: 139 GMHGMTAYVGFYEICSPKQGDYVFISAASGAVGQLVGQFAKLLGCYVVGSAGTKEKVDLL 198

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           KNKFGFDEAFNYKEE DL AALKRYFP GI++YFENVGGK LDAVL NM++  RIA CGM
Sbjct: 199 KNKFGFDEAFNYKEEKDLEAALKRYFPNGINIYFENVGGKMLDAVLANMRLHSRIAVCGM 258

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           ISQYNL++PEGVHNL  L++KR+RMEGFIV D+YHLYPKFLEMI+P IK GK+ YVED+A
Sbjct: 259 ISQYNLERPEGVHNLFCLITKRVRMEGFIVFDYYHLYPKFLEMILPCIKGGKITYVEDVA 318

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           EGLESAPAALIGLFSG+NVGKQVV VA E
Sbjct: 319 EGLESAPAALIGLFSGRNVGKQVVVVARE 347

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/269 (77%), Positives = 244/269 (90%), Gaps = 1/269 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP-YLFKIQHTDVPLSYYTGIL 60
            PISG GVAKVLDS +P++ KGD +WGMTGWEEYSLITA   LFKI   DVPLSYYTGIL
Sbjct: 80  SPISGRGVAKVLDSRHPDYKKGDFIWGMTGWEEYSLITATETLFKIHDKDVPLSYYTGIL 139

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           GMPG+TAY GFYE+CS K GE VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL
Sbjct: 140 GMPGLTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 199

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           KNKFGFD+AFNYKEE DL+AALKRYFP+GID+YFENVGGK LDAV+ NM++RGRI+ CGM
Sbjct: 200 KNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKMLDAVVLNMRVRGRISVCGM 259

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           +SQYNL++PEGVHNLM+LV KR+ MEGF+V D +HL+PK+L+M++P+IK+GK+VYVED+A
Sbjct: 260 VSQYNLEQPEGVHNLMHLVPKRIHMEGFLVYDFFHLFPKYLDMVLPYIKQGKIVYVEDIA 319

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           EGLE+APAAL GLF+G+N+GKQVVAV+ E
Sbjct: 320 EGLENAPAALTGLFAGRNIGKQVVAVSHE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/268 (78%), Positives = 240/268 (89%), Gaps = 1/268 (0%)

Query: 3   PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYLFKIQHTDVPLSYYTGILG 61
           PI+GYGVAKVL+S +P+F KGDLVWGMTGWEEYS+IT    LFKI   DVPLSYYTGILG
Sbjct: 76  PITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILG 135

Query: 62  MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
           MPGMTAY GF+EVCS K GE VF+SAASGAVGQLVGQFAK+LGCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLK 195

Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
           +KFGFDEAFNYKEE DL+AALKRYFP+GID+YFENVGGK LDAVL NMK+ GRIA CGMI
Sbjct: 196 SKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMI 255

Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE 241
           SQYNL++ EGVHNL  L++KR+RMEGF+V D+YHLYPK+LEM+IP IK GK+VYVED+A 
Sbjct: 256 SQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAH 315

Query: 242 GLESAPAALIGLFSGQNVGKQVVAVAPE 269
           GLESAP AL+GLFSG+N+GKQVV V+ E
Sbjct: 316 GLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/269 (78%), Positives = 240/269 (89%), Gaps = 1/269 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYLFKIQHTDVPLSYYTGIL 60
            PI+GYGVAKVL+S +P+F KGDLVWGMTGWEEYS+IT    LFKI   DVPLSYYTGIL
Sbjct: 75  SPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGIL 134

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           GMPGMTAY GF+EVCS K GE VF+SAASGAVGQLVGQFAK+LGCYVVGSAGSK+KVDLL
Sbjct: 135 GMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLL 194

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           K+KFGFDEAFNYKEE DL+AALKRYFP+GID+YFENVGGK LDAVL NMK+ GRIA CGM
Sbjct: 195 KSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGM 254

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           ISQYNL++ EGVHNL  L++KR+RMEGF+V D+YHLYPK+LEM+IP IK GK+VYVED+A
Sbjct: 255 ISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVA 314

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
            GLESAP AL+GLFSG+N+GKQVV V+ E
Sbjct: 315 HGLESAPTALVGLFSGRNIGKQVVMVSRE 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117874|ref|XP_002331653.1| predicted protein [Populus trichocarpa] gi|222874049|gb|EEF11180.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/269 (77%), Positives = 243/269 (90%), Gaps = 1/269 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP-YLFKIQHTDVPLSYYTGIL 60
            PISG GVAKVLDS +P++ KGD +WG+TGWEEYSLITA   LFKI   DVPLSYYTGIL
Sbjct: 80  SPISGRGVAKVLDSRHPDYKKGDFIWGITGWEEYSLITATETLFKIHDKDVPLSYYTGIL 139

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           GMPGMTAY GFYE+CS K GE VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL
Sbjct: 140 GMPGMTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 199

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           KNKFGFD+AFNYKEE DL+AALKRYFP+GID+YFENVGGK LDAVL NM++RGRI+ CGM
Sbjct: 200 KNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKILDAVLLNMRVRGRISVCGM 259

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           +SQYNL++PEGVHNLM+LV KR+ MEGF+V   +HL+PK+L+M++P+IK+GK+VYVED+A
Sbjct: 260 VSQYNLEQPEGVHNLMHLVLKRIHMEGFLVYYFFHLFPKYLDMVLPYIKQGKIVYVEDIA 319

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           EGLE+APAAL GLF+G+N+GKQVVAV+ E
Sbjct: 320 EGLENAPAALTGLFAGRNIGKQVVAVSRE 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/267 (79%), Positives = 240/267 (89%), Gaps = 1/267 (0%)

Query: 4   ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP-YLFKIQHTDVPLSYYTGILGM 62
           ISGYGVAKVLDS +P FSKGDLVWG TGWEEY+LITAP  LFKI + DVPLSYY GILGM
Sbjct: 79  ISGYGVAKVLDSGHPNFSKGDLVWGFTGWEEYTLITAPESLFKIPNNDVPLSYYIGILGM 138

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY GFYE+CS K GE V++SAASGAVGQLVGQFAKL+GCYVVGSAGSK+KVDLLKN
Sbjct: 139 PGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAKLIGCYVVGSAGSKEKVDLLKN 198

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           KFGFDEAFNYKEE DL A LKRYFPEGID+YFENVGG  LDAVL NM+++GRIAACGMIS
Sbjct: 199 KFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFENVGGPMLDAVLANMRVQGRIAACGMIS 258

Query: 183 QYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEG 242
           QYNLDKP GV+NLM ++ K+++M+GF+   ++HLYPKFLEMI+PH+KEGK+VYVED+AEG
Sbjct: 259 QYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFHLYPKFLEMILPHVKEGKVVYVEDIAEG 318

Query: 243 LESAPAALIGLFSGQNVGKQVVAVAPE 269
           LESAP ALIGLFSG+NVGKQVV VA E
Sbjct: 319 LESAPQALIGLFSGRNVGKQVVLVARE 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342898881|gb|AEL78826.1| ketone/zingerone synthase 2 [Rubus idaeus]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/270 (77%), Positives = 239/270 (88%), Gaps = 3/270 (1%)

Query: 3   PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPY---LFKIQHTDVPLSYYTGI 59
           PI+GYGVAKVL+S +  F +GDLVWG TGWEEY++I A +   LFKI++TDVPLSYYTGI
Sbjct: 83  PITGYGVAKVLESADARFKQGDLVWGFTGWEEYTVINATHIESLFKIENTDVPLSYYTGI 142

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           LGMPGMTAY GFYEVCS K GE V+ISAASGAVGQLVGQFAKL GCYVVGSAG+K+KVDL
Sbjct: 143 LGMPGMTAYAGFYEVCSPKKGETVYISAASGAVGQLVGQFAKLSGCYVVGSAGTKEKVDL 202

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           LKNKFGFDEAFNYKEE +L+AALKRYFPEGID+YFENVGGK LDAVL NM+ RGRIA CG
Sbjct: 203 LKNKFGFDEAFNYKEEPNLDAALKRYFPEGIDIYFENVGGKMLDAVLLNMRFRGRIAVCG 262

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
           MISQYNL+KPEGV NLM L+ K +R++GF VL++YHLY KFLEM++P IKEGK+ YVED+
Sbjct: 263 MISQYNLEKPEGVQNLMSLIYKEVRIQGFGVLNYYHLYEKFLEMVLPAIKEGKITYVEDV 322

Query: 240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
            EGLESAP+ALIGLF+G+NVGKQVV V+ E
Sbjct: 323 VEGLESAPSALIGLFTGRNVGKQVVVVSRE 352

Source: Rubus idaeus

Species: Rubus idaeus

Genus: Rubus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342898879|gb|AEL78825.1| ketone/zingerone synthase 1 [Rubus idaeus]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/269 (76%), Positives = 241/269 (89%), Gaps = 1/269 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP-YLFKIQHTDVPLSYYTGIL 60
            PI GYGVA+VL+S NP+F+ GDLVWG TGWEEYS+ITA   LFKI +TDVPLSYYTG+L
Sbjct: 80  SPIIGYGVARVLESGNPKFNPGDLVWGFTGWEEYSVITATESLFKIHNTDVPLSYYTGLL 139

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           GMPGMTAY GFYE+CS K GE V++SAASGAVGQLVGQFAKL GCYVVGSAGSK+KVDLL
Sbjct: 140 GMPGMTAYAGFYEICSPKKGETVYVSAASGAVGQLVGQFAKLTGCYVVGSAGSKEKVDLL 199

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           KNKFGFDEAFNYKEEADL+AAL+RYFP+GID+YFENVGGK LDAVLPNM+ +GRIA CGM
Sbjct: 200 KNKFGFDEAFNYKEEADLDAALRRYFPDGIDIYFENVGGKMLDAVLPNMRPKGRIAVCGM 259

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           ISQYNL++PEGV NLM L+ K++RMEGF+V  +YHLY KFLE ++P+IK+GK+ YVED+ 
Sbjct: 260 ISQYNLEQPEGVRNLMALIVKQVRMEGFMVFSYYHLYGKFLETVLPYIKQGKITYVEDVV 319

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           +GL++APAALIGL+SG+NVGKQVV V+ E
Sbjct: 320 DGLDNAPAALIGLYSGRNVGKQVVVVSRE 348

Source: Rubus idaeus

Species: Rubus idaeus

Genus: Rubus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792340|emb|CAN61472.1| hypothetical protein VITISV_043826 [Vitis vinifera]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/267 (78%), Positives = 235/267 (88%), Gaps = 1/267 (0%)

Query: 4   ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP-YLFKIQHTDVPLSYYTGILGM 62
           I GYGVAKVLDS +P FSKGDLVWG T WEEYSLIT+   L KI  TDVPLSYYTGILGM
Sbjct: 98  IEGYGVAKVLDSGHPNFSKGDLVWGFTNWEEYSLITSTEMLIKIPTTDVPLSYYTGILGM 157

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY GFYE+C+ K GE V++SAASGAVGQLVGQFAKLLGCYVVGSAGSK+KVDLLKN
Sbjct: 158 PGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVVGSAGSKEKVDLLKN 217

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           KFGFDEAFNYKEE DL A LKRYFPEGID+YF+NVGGK LDAVL NM++ GRIAACGMIS
Sbjct: 218 KFGFDEAFNYKEETDLVACLKRYFPEGIDIYFDNVGGKMLDAVLLNMRVHGRIAACGMIS 277

Query: 183 QYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEG 242
           QYNLDK EGV NL+ ++ K++RM+GF++  +YHLYPK+LEM++PHIKEGK+VYVED  EG
Sbjct: 278 QYNLDKLEGVCNLINIIIKQVRMQGFVITSYYHLYPKYLEMVLPHIKEGKIVYVEDTVEG 337

Query: 243 LESAPAALIGLFSGQNVGKQVVAVAPE 269
           LESAP ALIGLFSG+NVGKQVV VA E
Sbjct: 338 LESAPQALIGLFSGRNVGKQVVVVARE 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	269
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	0.996	0.781	0.722	4.4e-107
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.988	0.777	0.705	1.5e-106
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	0.992	0.773	0.712	5.1e-106
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	0.992	0.760	0.721	1.4e-105
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	0.996	0.765	0.702	2.8e-105
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	0.996	0.776	0.703	9.5e-105
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.992	0.771	0.706	3.2e-104
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	0.996	0.759	0.707	8.6e-104
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	0.996	0.759	0.692	2e-102
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.988	0.753	0.686	3e-101

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
 Identities = 195/270 (72%), Positives = 233/270 (86%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT--APYLFKIQHTDVPLSYYTGI 59
             +PI GYGV++V++S +P++ KGDL+WG+ GWEEYS+IT  A   FKIQHTDVPLSYYTG+
Sbjct:    74 KPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQHTDVPLSYYTGL 133

Query:    60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQFAK++GCYVVGSAGSK+KVDL
Sbjct:   134 LGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDL 193

Query:   120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
             LK KFGFD+AFNYKEE+DL+AALKR FP+GID+YFENVGGK LDAVL NM   GRIA CG
Sbjct:   194 LKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCG 253

Query:   180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
             MISQYNL+  EGVHNL  ++ KR+R++GF+V D Y  YPKFLE+++P IKEGK+ YVED+
Sbjct:   254 MISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDV 313

Query:   240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             A+GLE AP AL+GLF G+NVGKQVV +A E
Sbjct:   314 ADGLEKAPEALVGLFHGKNVGKQVVVIARE 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
 Identities = 189/268 (70%), Positives = 235/268 (87%)

Query:     4 ISGYGVAKVLDSENPEFSKGDLVWG-MTGWEEYSLITAPY-LFKIQHTDVPLSYYTGILG 61
             I  YGV+KVLDS +P + KG+L+WG   GWEEY+LI  PY LFKIQ  DVPLSYY GILG
Sbjct:    75 IVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQDKDVPLSYYVGILG 134

Query:    62 MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
             MPGMTAY GF+E+CS K GE VF++AA+G+VGQLVGQFAK+ GCYVVGSAGSK+KVDLLK
Sbjct:   135 MPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLK 194

Query:   122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
             NKFGFD+AFNYKEE+D + ALKR+FPEGID+YF+NVGGK L+AV+ NM++ GRIA CGM+
Sbjct:   195 NKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMV 254

Query:   182 SQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE 241
             SQY+L +PEGVHNL+ L+ K++RM+GF+V+D+YHLYPKFLEM++P IKEGK+ YVED++E
Sbjct:   255 SQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPRIKEGKVTYVEDISE 314

Query:   242 GLESAPAALIGLFSGQNVGKQVVAVAPE 269
             GLESAP+AL+G++ G+NVG QVVAV+ E
Sbjct:   315 GLESAPSALLGVYVGRNVGNQVVAVSRE 342

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
 Identities = 193/271 (71%), Positives = 229/271 (84%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYL---FKIQHTDVPLSYYTG 58
             QPI GYGV+++++S +P++ KGDL+WG+  WEEYS+IT P     FKIQHTDVPLSYYTG
Sbjct:    76 QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVIT-PMTHAHFKIQHTDVPLSYYTG 134

Query:    59 ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
             +LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVD
Sbjct:   135 LLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVD 194

Query:   119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
             LLK KFGFD+AFNYKEE+DL AALKR FP GID+YFENVGGK LDAVL NM + GRIA C
Sbjct:   195 LLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVC 254

Query:   179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238
             GMISQYNL+  EGVHNL  ++ KR+R++GF+V D Y  Y KFLE ++PHI+EGK+ YVED
Sbjct:   255 GMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVED 314

Query:   239 MAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             +A+GLE AP AL+GLF G+NVGKQVV VA E
Sbjct:   315 VADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
 Identities = 194/269 (72%), Positives = 229/269 (85%)

Query:     3 PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYL-FKIQHTDVPLSYYTGIL 60
             PI G GV+KV+DS +P++ KGDL+WG+ GWEEYS+IT   Y  FKI+HTDVPLSYYTG+L
Sbjct:    83 PIIGLGVSKVIDSGHPDYKKGDLLWGLVGWEEYSVITLTTYSHFKIEHTDVPLSYYTGLL 142

Query:    61 GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
             GMPGMTAY GFYEVCS K GE VF+SAASGAVGQLVGQFAKL+GCYVVGSAGSK+KV LL
Sbjct:   143 GMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVYLL 202

Query:   121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
             K KFGFD+AFNYKEE D +AALKRYFPEGID+YFENVGGK LDAVL NMK+ GR+A CGM
Sbjct:   203 KTKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENVGGKMLDAVLINMKLHGRVAVCGM 262

Query:   181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
             ISQYNL  PEGVHNL  ++ KR++++GF V D Y  YPKFL+ ++P+I+EGK+ YVED+A
Sbjct:   263 ISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKFLDFVLPYIREGKITYVEDIA 322

Query:   241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             EG ES P+AL+GLF G+NVGKQ+  VA E
Sbjct:   323 EGFESGPSALLGLFEGKNVGKQLFVVARE 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
 Identities = 189/269 (70%), Positives = 232/269 (86%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYL-FKIQHTDVPLSYYTGIL 60
             +PI G+ V+KV+DS +P++ KGDL+WG+ GW EYSLIT  +  +KIQHTDVPLSYYTG+L
Sbjct:    82 EPIYGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLITPDFSHYKIQHTDVPLSYYTGLL 141

Query:    61 GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
             GMPGMTAY GFYE+CS K GE VF+SAASGAVGQLVGQFAK++GCYVVGSAGS +KVDLL
Sbjct:   142 GMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKIMGCYVVGSAGSNEKVDLL 201

Query:   121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
             KNKFGFD+AFNYK E DLNAALKR FPEGID+YFENVGGK LDAVL NMK+ GRIA CGM
Sbjct:   202 KNKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVGGKMLDAVLLNMKLHGRIAVCGM 261

Query:   181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
             ISQYNL+  EGVHNL  ++ KR+R++GF+V D++  + KFL+ ++P+I+EGK+ YVED+ 
Sbjct:   262 ISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFLDFVLPYIREGKITYVEDVV 321

Query:   241 EGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             EGLE+ P+AL+GLF G+NVGKQ++AVA E
Sbjct:   322 EGLENGPSALLGLFHGKNVGKQLIAVARE 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
 Identities = 190/270 (70%), Positives = 228/270 (84%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITA-PYL-FKIQHTDVPLSYYTGI 59
             +PI GYGV++V++S +P++ KGDL+WG+ GWEEYS+IT   ++ FKIQHTD+PLSYYTG+
Sbjct:    76 KPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFKIQHTDIPLSYYTGL 135

Query:    60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQFAK++GCYVVGSAGS +KVDL
Sbjct:   136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSTEKVDL 195

Query:   120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
             LK KFGFD+AFNYKEE DL+AALKR FP GID+YFENVGGK LDAVL NM   GRIA CG
Sbjct:   196 LKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDAVLLNMNPHGRIAVCG 255

Query:   180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
             MISQYNL+  EGVHNL  ++ KR+R++GF V D Y  Y KFL+ ++PHIKEGK+ YVED+
Sbjct:   256 MISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFVLPHIKEGKITYVEDV 315

Query:   240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             A+GLE  P AL+GLF G+NVGKQVV +A E
Sbjct:   316 ADGLEKGPEALVGLFHGKNVGKQVVVIARE 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
 Identities = 190/269 (70%), Positives = 231/269 (85%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITA-PYL-FKIQHTDVPLSYYTGI 59
             +PISG+GV+KV+DS + ++ +GDL+WG  GWEEYS+IT  P L FKI HT+ PLSYYTG+
Sbjct:    77 KPISGFGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPIPNLHFKIHHTNFPLSYYTGL 136

Query:    60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             LGMPGMTAYVGFYE+C+ K G+ VF+SAASGAVGQLVGQFAKL+GCYVVGSAGSK+KVDL
Sbjct:   137 LGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDL 196

Query:   120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
             LKNKFGFD+AFNYKEE +L  ALKR FPEGID+YFENVGGK LDAV+ NM+  GRIAACG
Sbjct:   197 LKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLDAVILNMRPHGRIAACG 256

Query:   180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
             MISQYNL  PEG++ L  +  KR+R+EGF   D++H Y +FLE ++P+IKEGK+ YVED+
Sbjct:   257 MISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEFVVPYIKEGKIKYVEDV 316

Query:   240 AEGLESAPAALIGLFSGQNVGKQVVAVAP 268
             A+GLESAPAAL+GLF G+NVGKQ+V V+P
Sbjct:   317 ADGLESAPAALVGLFHGKNVGKQLVVVSP 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
 Identities = 191/270 (70%), Positives = 230/270 (85%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYL-FKIQHTDVPLSYYTGI 59
             +PISG+GVAK +DS +P +  GDL+WG  GWEEYS+IT  P   FKI HTDVPLS+YTG+
Sbjct:    84 KPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIHHTDVPLSFYTGL 143

Query:    60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             LG+PG+TAYVGFYE+CS K GE VF+SAASGAVGQLVGQFAK+ GCYVVGSA SK+KVDL
Sbjct:   144 LGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKVDL 203

Query:   120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
             LK KFG+DEAFNYKEE DL+AALKR FPEGID+YFENVGGK LDAVL NM+  GRIAACG
Sbjct:   204 LKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKMLDAVLENMRTHGRIAACG 263

Query:   180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
             MISQYNL +PEGVHNL  +V KR+R++GF  ++ +  Y KFL+ I+P+++EGK+ YVED+
Sbjct:   264 MISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLDFILPYVREGKITYVEDI 323

Query:   240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             A+GLE+ P+ALIGLF G+NVGKQ+VAVA E
Sbjct:   324 AQGLENGPSALIGLFHGKNVGKQLVAVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
 Identities = 187/270 (69%), Positives = 227/270 (84%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYL-FKIQHTDVPLSYYTGI 59
             +PISG+GVAK +DS +P +  GDL+WG  GWEEYS+IT  P   FKI HTDVPLS+YTG+
Sbjct:    84 KPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIHHTDVPLSFYTGL 143

Query:    60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             LG+PG+TAYVGFYE+CS K GE VF+SAASGAVGQLVGQFAK+ GCYVVGSA SK+KVDL
Sbjct:   144 LGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSKEKVDL 203

Query:   120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
             LK KFG+D+AFNYKEE DL+AALKR FPEGID+YFENVGGK LDAVL NM+  GRIAACG
Sbjct:   204 LKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLDAVLQNMRTHGRIAACG 263

Query:   180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
             MISQYNL +PEG+HN   +V KR+R++ F  ++ +  Y KFL+ I+PH++EGK+ YVED+
Sbjct:   264 MISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKFLDFILPHVREGKITYVEDI 323

Query:   240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             A+GLE+ P+ALIGLF G+NVGKQ+V VA E
Sbjct:   324 AQGLENGPSALIGLFHGKNVGKQLVEVARE 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
 Identities = 184/268 (68%), Positives = 226/268 (84%)

Query:     2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYL-FKIQHTDVPLSYYTGI 59
             +PISG+GVAK +DS +P +  GDL+WG  GWEEYS+IT  P   FKI HTDVPLS+YTG+
Sbjct:    84 KPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIHHTDVPLSFYTGL 143

Query:    60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             LG+PG+TAY+GFYE+CS K GE VF+SAASGAVGQLVGQFAK+ GCYVVGSA S++KVDL
Sbjct:   144 LGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYVVGSASSEEKVDL 203

Query:   120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
             LK KFG+D+AFNYKEE DL+AALKR FPEGID+YFENVGGK L+AVL NM+  GRIAACG
Sbjct:   204 LKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLEAVLENMRTHGRIAACG 263

Query:   180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
             MISQYNL KPE +HN   +V KR+R++GF  ++ +  Y KFL+ I+PH++EGKL YVED+
Sbjct:   264 MISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDFILPHVREGKLTYVEDI 323

Query:   240 AEGLESAPAALIGLFSGQNVGKQVVAVA 267
             ++GLE+ P+ALIGLF G+NVGKQ+V VA
Sbjct:   324 SQGLENGPSALIGLFHGKNVGKQLVEVA 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6WAU0	PULR_MENPI	1, ., 3, ., 1, ., 8, 1	0.7052	0.9888	0.7777	N/A	no
Q39173	P2_ARATH	1, ., 3, ., 1, ., 7, 4	0.7222	0.9962	0.7813	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.963
3rd Layer	1.3.1.81	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.74	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	269
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-177
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-149
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-139
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-111
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	1e-100
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	2e-68
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	4e-59
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-44
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	9e-30
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-25
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	3e-22
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-21
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	7e-21
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-20
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	4e-19
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-17
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-17
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-17
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-17
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	8e-16
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-15
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	4e-14
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	6e-13
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-12
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	2e-12
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	3e-12
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-12
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	3e-12
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-11
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	7e-11
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	6e-10
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-09
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	3e-09
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	3e-09
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-08
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-08
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	5e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	8e-08
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	1e-07
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-07
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	3e-07
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	4e-07
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-06
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	1e-06
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-06
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-06
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-06
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	1e-05
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-05
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	4e-05
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	1e-04
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-04
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-04
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	0.001
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	0.001
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	0.002
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	0.002
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	0.002
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	0.003

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  492 bits (1268), Expect = e-177
 Identities = 192/266 (72%), Positives = 223/266 (83%), Gaps = 1/266 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP-YLFKIQHTDVPLSYYTGIL 60
           + I+GYGVAKV+DS NP+F  GDLVWG TGWEEYSLI     L KI HTDVPLSYY G+L
Sbjct: 73  EVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLL 132

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           GMPG+TAY GFYEVC  K GE VF+SAASGAVGQLVGQ AKL GCYVVGSAGS +KVDLL
Sbjct: 133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL 192

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           KNK GFD+AFNYKEE DL+AALKRYFP GID+YF+NVGGK LDAVL NM + GRIAACGM
Sbjct: 193 KNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
           ISQYNL+ PEGV NL+ ++ KR++++GF+V D+ H YP+FLE +  +IKEGKL YVED+A
Sbjct: 253 ISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIA 312

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAV 266
           +GLESAP A +GLF+G N+GKQVV V
Sbjct: 313 DGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  419 bits (1078), Expect = e-149
 Identities = 185/271 (68%), Positives = 221/271 (81%), Gaps = 3/271 (1%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLI--TAPYLFKIQ-HTDVPLSYYTG 58
           Q I G+GV+KV+DS++P F  GDL+ G+TGWEEYSLI  +   L KIQ   D+PLSY+ G
Sbjct: 78  QRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLG 137

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           +LGM G TAY GFYEVCS K G+ VF+SAASGAVGQLVGQ AKL GCYVVGSAGS  KVD
Sbjct: 138 LLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 197

Query: 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
           LLKNK GFDEAFNYKEE DL+AALKRYFPEGID+YF+NVGG  LDA L NMKI GRIA C
Sbjct: 198 LLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVC 257

Query: 179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238
           GM+S  +L   +G+HNL  L+SKR+RM+GF+  D+ HL+P+FLE +  + K+GK+VY+ED
Sbjct: 258 GMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIED 317

Query: 239 MAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           M+EGLESAPAAL+GLFSG+NVGKQV+ VA E
Sbjct: 318 MSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  395 bits (1018), Expect = e-139
 Identities = 136/265 (51%), Positives = 177/265 (66%), Gaps = 3/265 (1%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPY-LFKIQHTD-VPLSYYTGI 59
           +P+ G GV +V++S +P+F  GDLV G  GW+EY+++     L K+  +  +PLS Y G+
Sbjct: 66  EPMRGGGVGEVVESRSPDFKVGDLVSGFLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGV 125

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           LGM G+TAY G  E+   K GE V +SAA+GAVG +VGQ AKLLG  VVG AGS +K   
Sbjct: 126 LGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW 185

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           L  + GFD A NYK   DL  ALK   P+GIDVYF+NVGG+ LDA L  +   GRIA CG
Sbjct: 186 LVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCG 244

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
            ISQYN  +P G  NL  +++KRL M+GFIV D+   +P+ L  +   + EGKL Y ED+
Sbjct: 245 AISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV 304

Query: 240 AEGLESAPAALIGLFSGQNVGKQVV 264
            EGLE+AP A +GLF+G+N GK VV
Sbjct: 305 VEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  323 bits (830), Expect = e-111
 Identities = 135/267 (50%), Positives = 174/267 (65%), Gaps = 3/267 (1%)

Query: 3   PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGM 62
            + G  VAKV+ S +P F  GD+V G++GW+EY++     L K+  +  PLS Y G+LGM
Sbjct: 74  VMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  ++   K GE V +SAA+GAVG +VGQ AKL GC VVG AG  +K D L  
Sbjct: 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTE 193

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           + GFD   +YK E D   ALK   P+GIDVYFENVGG+ LDAVLP + +  RI  CG IS
Sbjct: 194 ELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAIS 252

Query: 183 QYN-LDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEGKLVYVEDMA 240
           QYN  + P G   L  L++KRLR++GFIV   Y   +P+ L  +   +KEGK+ Y E + 
Sbjct: 253 QYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIV 312

Query: 241 EGLESAPAALIGLFSGQNVGKQVVAVA 267
           +GLE+AP A IGL SG+N GK VV VA
Sbjct: 313 DGLENAPEAFIGLLSGKNFGKLVVKVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  294 bits (755), Expect = e-100
 Identities = 122/272 (44%), Positives = 165/272 (60%), Gaps = 9/272 (3%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLI---TAPYLFKI---QHTDVPLSY 55
             + G  VAKV++S+N +F  G +V    GW  +++      P L+K+      D+P S 
Sbjct: 60  DTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSL 119

Query: 56  YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
             G+LGMPG+TAY G  E+C  K GE V ++ A+GAVG LVGQ AK+ GC V+G AGS D
Sbjct: 120 ALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD 179

Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           KV  LK + GFD  FNYK    L  ALK   P+GID YF+NVGG+    VL +M   GR+
Sbjct: 180 KVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRV 237

Query: 176 AACGMISQYNLDKPEGVHNL-MYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV 234
           A CG IS YN  +P+    +   ++ K+L+MEGFIV      +P+ L+ ++  IKEGKL 
Sbjct: 238 AVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLK 297

Query: 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
           Y E + EG E+ P A IG+  G+N GK +V V
Sbjct: 298 YREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  214 bits (546), Expect = 2e-68
 Identities = 120/270 (44%), Positives = 159/270 (58%), Gaps = 18/270 (6%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGM 62
           G  VA+V++S+N    KG +V    GW  +S+     L K+       +PLS   G +GM
Sbjct: 62  GQQVARVVESKNVALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGM 121

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  E+C  K GE V ++AA+GAVG +VGQ AKL GC VVG+AGS +KV  LK 
Sbjct: 122 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK- 180

Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           K GFD AFNYK    L   LK+  P+G D YF+NVGG+  + V+  MK  GRIA CG IS
Sbjct: 181 KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 240

Query: 183 QYNLD-------KPEGVHNLMYLVSKRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLV 234
            YN          PE V      + + LRMEGFIV      +  K L+ ++  + EGK+ 
Sbjct: 241 TYNRTGPLPPGPPPEIV------IYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQ 294

Query: 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264
           Y E + EG E+ PAA +G+  G+N+GK +V
Sbjct: 295 YKEYVIEGFENMPAAFMGMLKGENLGKTIV 324

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  191 bits (486), Expect = 4e-59
 Identities = 105/277 (37%), Positives = 156/277 (56%), Gaps = 15/277 (5%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMT-GWEEYSLITAPYLFKI--QHTDVPLSYYTG 58
           Q + G GV  V +S++ +F+ GD+V      W+ Y+++    L K+  Q  D  LSY+ G
Sbjct: 72  QVLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131

Query: 59  ILGMPGMTAYVGFYE--VCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
            +G+PG+TA +G  E    +    + + +S A+GA G L GQ  +LLGC  VVG  GS +
Sbjct: 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDE 191

Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           K  LLK++ GFD A NYK + ++   L+   PEG+DVYF+NVGG+  D V+  M     I
Sbjct: 192 KCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHI 250

Query: 176 AACGMISQYNLDKP------EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK 229
             CG ISQYN D P      E    +  L  + +  E F+VL++   + + +  +   +K
Sbjct: 251 ILCGQISQYNKDVPYPPPLPEATEAI--LKERNITRERFLVLNYKDKFEEAIAQLSQWVK 308

Query: 230 EGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
           EGKL   E + EGLE+A  A   + +G N+GKQ+V V
Sbjct: 309 EGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  152 bits (386), Expect = 2e-44
 Identities = 89/256 (34%), Positives = 133/256 (51%), Gaps = 20/256 (7%)

Query: 20  FSKGDLVWGMT--GWEEYSLITAPYLFKIQHTDVPL---SYYTGILGMPGMTAYVGFYEV 74
           F  GD V  M+   + EY ++ A +        VP         ++   G+TA +   EV
Sbjct: 82  FKVGDAVATMSFGAFAEYQVVPARHAVP-----VPELKPEVLPLLVS--GLTASIALEEV 134

Query: 75  CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE 134
              K GE V ++AA+G  GQ   Q AKL GC+V+G+  S +K + LK+  G D   NYK 
Sbjct: 135 GEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKT 193

Query: 135 EADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDK---PEG 191
           E DL   LK+ +P+G+DV +E+VGG+  D  + N+ ++GR+   G IS Y       P  
Sbjct: 194 E-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVK 252

Query: 192 VHNL-MYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE--GLESAPA 248
              L   L++K   + GF +  +  L P+ L+ ++   + GKLV   D     GLES   
Sbjct: 253 GATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVAD 312

Query: 249 ALIGLFSGQNVGKQVV 264
           A+  L+SG+N+GK VV
Sbjct: 313 AVDYLYSGKNIGKVVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  113 bits (286), Expect = 9e-30
 Identities = 79/269 (29%), Positives = 118/269 (43%), Gaps = 15/269 (5%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMT------GWEEYSLITAPYLFKIQHTDVPLSYYTGI 59
             GV   + S    F  GD V  +       G+ EY ++ A +L  +    +        
Sbjct: 65  AAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLP-DGLSFEE-AAA 122

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           L + G+TA++  ++    K GE V +  A+G VG    Q AK LG  VV    S +K++L
Sbjct: 123 LPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLEL 182

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           LK + G D   NY+EE  +    +    +G+DV  + VGG T  A L  +   GR+ + G
Sbjct: 183 LK-ELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIG 241

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEG-FIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238
            +S      P    NL+ L+ KRL + G  +         + L  +   +  GKL  V D
Sbjct: 242 ALS----GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVID 297

Query: 239 MAEGLESAPAALIGLFS-GQNVGKQVVAV 266
               L  APAA   L    +  GK V+ V
Sbjct: 298 RVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  101 bits (255), Expect = 2e-25
 Identities = 75/260 (28%), Positives = 102/260 (39%), Gaps = 36/260 (13%)

Query: 15  SENPEFSKGDLVWGMTGWE------EYSLITAPYLFKIQHTDVP--LSYYT-GILGMPGM 65
                F  GD V+GMT +       EY ++ A  L        P  LS+     L + G+
Sbjct: 76  PGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALK-----PANLSFEEAAALPLAGL 130

Query: 66  TAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125
           TA+   +E+   K G+ V I  A+G VG    Q AK  G  V+ +A S    D L+   G
Sbjct: 131 TAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAANADFLR-SLG 188

Query: 126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA-ACGMISQY 184
            DE  +Y +     AA     P G+D   + VGG+TL   L  +K  GR+    G     
Sbjct: 189 ADEVIDYTKGDFERAAA----PGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAE 244

Query: 185 NLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLE 244
              K  GV      V                   + L  +   ++ GKL  V D    LE
Sbjct: 245 QAAKRRGVRAGFVFVEPD---------------GEQLAELAELVEAGKLRPVVDRVFPLE 289

Query: 245 SAPAALIGLFSGQNVGKQVV 264
            A  A   L SG   GK V+
Sbjct: 290 DAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 93.5 bits (233), Expect = 3e-22
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 78  KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD 137
           + GE V +  A   VG    Q AKL G  V+ +AGS+DK++  K   G D   +Y++E  
Sbjct: 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDF 223

Query: 138 LNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMY 197
           +    +     G+DV  E+VG  T +  L ++   GR+  CG  + Y     E   +L +
Sbjct: 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRH 278

Query: 198 LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQ 257
           +  ++L + G             L+  +  +  GKL  V D    LE A  A   L S +
Sbjct: 279 VFWRQLSILG-----STMGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESRE 333

Query: 258 NVGKQVVAV 266
             GK V+  
Sbjct: 334 QFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 89.7 bits (223), Expect = 4e-21
 Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 14/196 (7%)

Query: 31  GWEEYSLITAPYLFKIQHTDVPLSYYTGIL-GMPGMTAYVGFYEVCSAKHGECVFISAAS 89
           G+ EY ++ A  L  +      LS     L   P  TAY         K G+ V +  A 
Sbjct: 88  GFAEYVVVPADNLVPL---PDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAG 144

Query: 90  GAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEG 149
           G VG L  Q AK  G  V+ +  S +K++L K + G D   +YKEE DL   L+     G
Sbjct: 145 G-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELRLTGGGG 201

Query: 150 IDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF 208
            DV  + VGG  TL   L  ++  GRI   G  S            L  L+ K L + G 
Sbjct: 202 ADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDD-----LRRLLFKELTIIGS 256

Query: 209 IVLDHYHLYPKFLEMI 224
                   + + L+++
Sbjct: 257 TG-GTREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 89.6 bits (223), Expect = 7e-21
 Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 13/169 (7%)

Query: 20  FSKGDLVW-GMTGWE-------EYSLITAPYLFKIQHTDVPLSYYTGI-LGMPGMTAYVG 70
              GD VW    GW        EY ++ A  L  +      +S+  G  LG+P +TAY  
Sbjct: 79  LKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPL---PDGVSFEQGAALGIPALTAYRA 135

Query: 71  FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF 130
            +    AK GE V +   SGAVG    Q A+  G  V+ +A S +  +L++   G D  F
Sbjct: 136 LFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQA-GADAVF 194

Query: 131 NYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           NY+ E   +  L     +G+DV  E +    L   L  +   GRI   G
Sbjct: 195 NYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYG 243

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 88.3 bits (220), Expect = 2e-20
 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 33/216 (15%)

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
            TA+   +++   K GE V I   +  VG    Q AK LG  V+ +AGS++K++  +   
Sbjct: 125 FTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-AL 183

Query: 125 GFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
           G D A NY+ E D    +K      G+DV  + VGG  L   L  +   GR+   G++  
Sbjct: 184 GADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLG- 241

Query: 184 YNLDKPEGVH---NLMYLVSKRLRMEGF------------IVLDHYHLYPKFLEMIIPHI 228
                  G     +L  L+ KRL + G             +          F E + P  
Sbjct: 242 -------GAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAA-------FREHVWPLF 287

Query: 229 KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264
             G++  V D    LE A  A   + S +++GK V+
Sbjct: 288 ASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 84.6 bits (210), Expect = 4e-19
 Identities = 76/273 (27%), Positives = 111/273 (40%), Gaps = 40/273 (14%)

Query: 9   VAKVLDSENPEFSKGDLVWGMTGWE------EYSLITAPYLFKIQHTDVP--LSYYTG-I 59
           V  V  S    F  GD V+G    +      EY +     L K      P  +S+     
Sbjct: 70  VVAV-GSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKK-----PEGVSFEEAAA 123

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           L + G+TA     +    K G+ V I+ ASG VG    Q AK LG +V G   ++   +L
Sbjct: 124 LPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR-NAEL 182

Query: 120 LKNKFGFDEAFNYKEE--ADLNAALKRYFPEGIDVYFENVGGKTLDAV--LPNMKIRGRI 175
           +++  G DE  +Y  E    L A  ++Y     DV F+ VG            +K  GR 
Sbjct: 183 VRS-LGADEVIDYTTEDFVALTAGGEKY-----DVIFDAVGNSPFSLYRASLALKPGGRY 236

Query: 176 AACG----MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG 231
            + G     +    L  P  +        +RL+   F+   +     + LE +   ++EG
Sbjct: 237 VSVGGGPSGLLLVLLLLPLTL----GGGGRRLKF--FLAKPN----AEDLEQLAELVEEG 286

Query: 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264
           KL  V D    LE AP A   L SG+  GK V+
Sbjct: 287 KLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 80.6 bits (200), Expect = 1e-17
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 6   GYGVAKVLDSENPEFSKGDLV-WGMTG--WEEYSLITAPYLFKIQHTDVPLSYYTGILGM 62
           G GV + +      F  GD V +      + EY ++ A  L K+    +       +L +
Sbjct: 62  GAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLP-DGISDETAAALL-L 119

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
            G+TA+    E    K G+ V + AA+G VG L+ Q+AK LG  V+G+  S++K +L + 
Sbjct: 120 QGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA 179

Query: 123 KFGFDEAFNYKEEADLNAALKRY-FPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
             G D   NY++E D    ++      G+DV ++ VG  T +  L +++ RG + + G  
Sbjct: 180 A-GADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNA 237

Query: 182 S 182
           S
Sbjct: 238 S 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 76.2 bits (188), Expect = 2e-17
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 11/138 (7%)

Query: 91  AVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP-E 148
            VG    Q AK LG   V+    S++K++L K + G D   NY++E D    ++      
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGR 58

Query: 149 GIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207
           G+DV  + VG   TL+  L  ++  GR+   G+     +  P     L  L+ K L + G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRDLLLKELTILG 113

Query: 208 FIVLDHYHLYPKFLEMII 225
            +       + + LE++ 
Sbjct: 114 SLGGGREE-FEEALELLA 130

Length = 131

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 47/271 (17%)

Query: 20  FSKGDLVWGMTG--------WEEYSLITAPYLFK----IQHTD---VPLSYYTGILGMPG 64
           F  GD V+G  G          EY+++ A  L      +   +   +PL          G
Sbjct: 79  FRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPL---------VG 129

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA+ G  +  + + G+ V I   +G VG +  Q AK  G  V  +A S +K    +   
Sbjct: 130 ITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SL 187

Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
           G D    Y+E        +     G DV F+ VGG+TLDA    + + GR+ +    + +
Sbjct: 188 GADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGATH 246

Query: 185 NLDKP--------EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKL-VY 235
           +L  P         GV  L+ L++   R        H+    + L      ++ G+L   
Sbjct: 247 DL-APLSFRNATYSGVFTLLPLLTGEGR-------AHHG---EILREAARLVERGQLRPL 295

Query: 236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
           ++     LE A AA   L SG   GK V+ V
Sbjct: 296 LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 79.5 bits (197), Expect = 3e-17
 Identities = 72/260 (27%), Positives = 107/260 (41%), Gaps = 31/260 (11%)

Query: 20  FSKGDLVWGMTGW---EEYSLITAPYLFKIQHTDVP--LSYYTGI-LGMPGMTAYVGFYE 73
           F  GD V  +TG     E  ++ A  +F +     P  LS+     L +   TAY     
Sbjct: 79  FKVGDRVVALTGQGGFAEEVVVPAAAVFPL-----PDGLSFEEAAALPVTYGTAYHALVR 133

Query: 74  VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133
               + GE V +  A+G VG    Q AK LG  V+ +A S++K+ L +   G D   +Y+
Sbjct: 134 RARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYR 192

Query: 134 EEADLNAALK-RYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI----AACGMISQYNLDK 188
           +  DL   +K      G+DV ++ VGG   +A L ++   GR+     A G I Q     
Sbjct: 193 DP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPA-- 249

Query: 189 PEGVHNLMYLVSKRLRMEGF----IVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLE 244
                NL+ L  K + + G            L    L  +   + EGK+         LE
Sbjct: 250 -----NLLLL--KNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLE 302

Query: 245 SAPAALIGLFSGQNVGKQVV 264
            A  AL  L   +  GK V+
Sbjct: 303 QAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.4 bits (186), Expect = 8e-16
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
            G+TAY   ++    + G  + I+  +G VG    Q AK  G  V+ +  SK   + +K 
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182

Query: 123 KFGFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIA 176
             G D   +Y +E D+   +K      G+D   + VGG+T  A+ P +   G + 
Sbjct: 183 SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLV 236

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 36/287 (12%)

Query: 6   GYGVAKVLDS---ENPEFSKGDLVWGMT---GWEEYSLITAPYLFKIQHTDVPLSYYTG- 58
           G+  A  +++      +F  GD V G+T   G+ E   + A  +F +      +S+    
Sbjct: 61  GFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPD---GMSFEEAA 117

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKV 117
              +  +TAY   +E+ + + G+ V + +A+G VG   GQ  K +    VVG+A S  K 
Sbjct: 118 AFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKH 176

Query: 118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAA 177
           + LK   G     +Y+ + D    +K+  PEG+D+  + +GG+        +K  GR+  
Sbjct: 177 EALKEN-GVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVV 234

Query: 178 CGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY------------HLYPK------ 219
            G  +    +K     +   L  K         +                L+ +      
Sbjct: 235 YGAANLVTGEKR----SWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTE 290

Query: 220 FLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
            ++ ++   +EGK+    D     E    A+  L S +N+GK V+  
Sbjct: 291 VMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 22/270 (8%)

Query: 8   GVAKVLDSENPEFSKGDLVWGMT---GWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPG 64
           G    +      +  GD V  +    G+ EY  + A  +  +      LS       +P 
Sbjct: 67  GEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPE---GLSLVEAA-ALPE 122

Query: 65  --MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
              T +   ++    K GE V I   +  +G    Q AK  G  V  +AGS +K      
Sbjct: 123 TFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACE 181

Query: 123 KFGFDEAFNYKEEADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
             G D A NY+EE D    +K     +G+DV  + VGG  L+  +  + + GRI   G  
Sbjct: 182 ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGF- 239

Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGFI-----VLDHYHLYPKFLEMIIPHIKEGKLVYV 236
                   +   +L  L++KRL + G       V +   +  +  E + P +  G++  V
Sbjct: 240 ----QGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV 295

Query: 237 EDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
            D    LE A  A   + SG ++GK V+ V
Sbjct: 296 IDKVFPLEDAAQAHALMESGDHIGKIVLTV 325

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 6e-13
 Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 13/209 (6%)

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA+    +    K G+ V I A +  VG    Q A+  G   + +  S++KVD  K   
Sbjct: 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-L 184

Query: 125 GFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
                  Y +E      +K+    +G+++  + VGG  L      + + G+    G +  
Sbjct: 185 AAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGG 244

Query: 184 YNLDKPEGVHNLMYLVSKRLRMEGFIVL----DHY--HLYPKFLEMIIPHIKEGKLVYVE 237
             ++K     NL+ L+ KR  +  F  L    D Y   L   F   ++P+++EG++  + 
Sbjct: 245 AKVEKF----NLLPLLRKRASII-FSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIV 299

Query: 238 DMAEGLESAPAALIGLFSGQNVGKQVVAV 266
           D    LE    A   L   +N+GK V+ V
Sbjct: 300 DRTYPLEEVAEAHTFLEQNKNIGKVVLTV 328

Length = 334

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 13/204 (6%)

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
           G+TA+   + +   K G+ V +    G V     QFAK  G  V+ ++ S +K++  K  
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202

Query: 124 FGFDEAFNYKEEADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
            G D   NY+   D    + +     G+D   E  G  TL   +  +   G I+  G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262

Query: 183 QYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEG 242
                  E    L+ L++K   + G  V         F  M    I+  ++  V D    
Sbjct: 263 -----GFEAPVLLLPLLTKGATLRGIAVGSRAQ----FEAMNR-AIEAHRIRPVIDRVFP 312

Query: 243 LESAPAALIGLFSGQNVGKQVVAV 266
            E A  A   L SG + GK V+ V
Sbjct: 313 FEEAKEAYRYLESGSHFGKVVIRV 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 78/286 (27%), Positives = 121/286 (42%), Gaps = 61/286 (21%)

Query: 12  VLDSENPEFSKGDLV----W--GMT---GWEEYSLITAPYLFKIQHTDVPL-----SYYT 57
           V+ SE+P F +GD V    +  G++   G+ +Y+ + A +L       VPL         
Sbjct: 68  VVSSEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWL-------VPLPEGLSLREA 120

Query: 58  GILGMPGMTAYVGFYEV----CSAKHGECVFISAASGAVGQL-VGQFAKLLGCYVVGSAG 112
             LG  G TA +    +     + + G  V ++ A+G VG L V   +KL G  VV S G
Sbjct: 121 MALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILSKL-GYEVVASTG 178

Query: 113 SKDKVDLLKNKFGFDEAFNYKEEADLNAAL-KRYFPEGIDVYFENVGGKTLDAVLPNMKI 171
             ++ D LK + G  E  + ++ +     L K  +   +D     VGG TL  VL  +K 
Sbjct: 179 KAEEEDYLK-ELGASEVIDREDLSPPGKPLEKERWAGAVD----TVGGHTLANVLAQLKY 233

Query: 172 RGRIAACGMISQYNLD-----------KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220
            G +AACG+    +L               G+ ++   ++ R      +  D   L P+ 
Sbjct: 234 GGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATD---LKPRN 290

Query: 221 LEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
           LE I   I              LE  P AL  + +GQ+ G+ VV V
Sbjct: 291 LESITREI-------------TLEELPEALEQILAGQHRGRTVVDV 323

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 65.1 bits (159), Expect = 3e-12
 Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 11/205 (5%)

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
            +T    F        GE + I  A+G  G +  Q A+L G  +  +A S DK++ LK +
Sbjct: 106 FLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-Q 163

Query: 124 FGFDEAFNYKEEADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGR---IAACG 179
            G     NY EE D    + R     G+DV    + G+ +   L  +   GR   IA   
Sbjct: 164 LGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTA 222

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
           + S  ++D    + N     S  LR      LD   +     EM +  ++EG+L      
Sbjct: 223 LKSAPSVDL-SVLSNNQSFHSVDLRKLLL--LDPEFIADYQAEM-VSLVEEGELRPTVSR 278

Query: 240 AEGLESAPAALIGLFSGQNVGKQVV 264
               +    A   L   +N+GK VV
Sbjct: 279 IFPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 23/236 (9%)

Query: 31  GWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASG 90
           G+ EY  +    L K+   +V       +      TA     +    K G+ V ++ A G
Sbjct: 117 GFAEYVKVPERSLVKL-PDNVSDESAA-LAACVVGTAVHAL-KRAGVKKGDTVLVTGAGG 173

Query: 91  AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPE 148
            VG    Q AK LG  V+    S +K+ +LK        +   + E+       K     
Sbjct: 174 GVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVK-----KLG--- 225

Query: 149 GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF 208
           G DV  E VG  T++  L ++   GR+   G     N+           L+ K +R+ G 
Sbjct: 226 GADVVIELVGSPTIEESLRSLNKGGRLVLIG-----NVTPDPAPLRPGLLILKEIRIIGS 280

Query: 209 IVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264
           I      +  + L++    +KEGK+  V D    LE    AL  L SG+ VG+ V+
Sbjct: 281 ISATKADVE-EALKL----VKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 29/194 (14%)

Query: 12  VLDSENPEFSKGDLV------WGMT---GWEEYSLITAPYLFKIQHTDVP--LS-YYTGI 59
           V+ S++P F +GD V       GM    G+ EY  + A ++  +     P  LS     I
Sbjct: 69  VVSSDDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL-----PEGLSLREAMI 123

Query: 60  LGMPGMTAYVGFYE----VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
           LG  G TA +  +       + + G  V ++ A+G VG +       LG  VV   G ++
Sbjct: 124 LGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVAILAKLGYTVVALTGKEE 182

Query: 116 KVDLLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRG 173
           + D LK   G  E  + ++  +      LK  +   ID     VGG  L  +L   K  G
Sbjct: 183 QADYLK-SLGASEVLDREDLLDESKKPLLKARWAGAID----TVGGDVLANLLKQTKYGG 237

Query: 174 RIAACGMISQYNLD 187
            +A+CG  +   L 
Sbjct: 238 VVASCGNAAGPELT 251

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 34/262 (12%)

Query: 20  FSKGDLVWGMT--GWEEYSLITAPYLFKIQHTD-------VPLSYYTGILGMPGMTAYVG 70
              GD V G+    +  +  + A  + KI  +        +P++Y         +TAY  
Sbjct: 49  LKVGDRVMGLAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAY---------LTAYYA 99

Query: 71  FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF 130
             ++   + GE V I AA+G VGQ   Q A+ LG  V  + GS++K + L+   G  +  
Sbjct: 100 LVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHI 159

Query: 131 NYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG---MISQYNL 186
               +      + R     G+DV   ++ G+ L A    +   GR    G   ++S   L
Sbjct: 160 FSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKL 219

Query: 187 DKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPK----FLEMIIPHIKEGKLVYVEDMAEG 242
                + N+ +            +       P+     L  ++  ++ G L  +      
Sbjct: 220 GMRPFLRNVSF--------SSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVP 271

Query: 243 LESAPAALIGLFSGQNVGKQVV 264
             S   A   + SG+++GK V+
Sbjct: 272 SASEIDAFRLMQSGKHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 61.1 bits (149), Expect = 7e-11
 Identities = 61/212 (28%), Positives = 85/212 (40%), Gaps = 13/212 (6%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           L M  +TAY    E+   + G+ V I+AAS +VG    Q A   G  V+ +  + +K D 
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRY-FPEGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
           L    G        EE DL A + R    +G+DV F+ VGG     +   +   G +   
Sbjct: 185 LLAL-GAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVY 242

Query: 179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKE----GKLV 234
           G +S      P         + K L   G+  LD   L P+     I  I +    G L 
Sbjct: 243 GALSGEPTPFPLKAA-----LKKSLTFRGY-SLDEITLDPEARRRAIAFILDGLASGALK 296

Query: 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
            V D     +    A   L SGQ +GK VV  
Sbjct: 297 PVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 58.4 bits (142), Expect = 6e-10
 Identities = 69/283 (24%), Positives = 106/283 (37%), Gaps = 40/283 (14%)

Query: 8   GVAKVLD--SENPEFSKGDLVW-GMTG---WEEYSLITAPYLFKIQHTDVPLSYYTGILG 61
           GV +V+   S       GD V     G   W  ++++ A  L K+   DV        L 
Sbjct: 71  GVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVP-NDVDPEQA-ATLS 128

Query: 62  MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
           +   TAY    +    + G+ V  + A+ AVGQ V Q AKLLG   +     +  ++ LK
Sbjct: 129 VNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELK 188

Query: 122 N---KFGFDEAFNYKEEADLNAA--LKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 176
                 G D     +E   L A   LK        +    VGGK+   +   +   G + 
Sbjct: 189 ERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMV 248

Query: 177 ACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY---------HLYPKFLEMIIPH 227
             G +S     +P  V     L+ K + + GF +              +  +  E+    
Sbjct: 249 TYGGMS----GQPVTV-PTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAEL---- 299

Query: 228 IKEGKLVYV------EDMAEGLESAPAALIGLFSGQNVGKQVV 264
           I+EGKL         +D  E  + A A  +    G   GKQV+
Sbjct: 300 IREGKLKAPPVEKVTDDPLEEFKDALANALKGGGG---GKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 57.0 bits (139), Expect = 1e-09
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 19/119 (15%)

Query: 20  FSKGDLVWGMT--GWEEYSLITAPYLFKI-------QHTDVPLSYYTGILGMPGMTAYVG 70
            + GD V G+    +    +  A  +  I       +   VP+ +         +TAY  
Sbjct: 44  LAVGDRVMGLAPGAFATRVVTDARLVVPIPDGWSFEEAATVPVVF---------LTAYYA 94

Query: 71  FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA 129
             ++   + GE V I AA+G VGQ   Q A+ LG  V  +AGS +K D L+   G  + 
Sbjct: 95  LVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRA-LGIPDD 152

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           +   G TA +G  ++ +   G+ V ++AA+G +G L+ Q AK  G  VVG+AG   K  L
Sbjct: 124 VVHDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           ++   G D A +Y      +   +     G+ V  + VGG    A L  +   GR    G
Sbjct: 183 VR-ALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYG 241

Query: 180 MIS 182
             S
Sbjct: 242 WAS 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 25/241 (10%)

Query: 26  VWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFI 85
             G  G+ EY ++ A Y+ KI    + L      L   G+T Y    +  + K G+ V +
Sbjct: 118 TDG--GYAEYVVVPARYVVKIPE-GLDL-AEAAPLLCAGITTYRAL-KKANVKPGKWVAV 172

Query: 86  SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRY 145
             A G +G +  Q+AK +G  V+    S++K++L K K G D   N  +   L A     
Sbjct: 173 VGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDSDALEAV---- 226

Query: 146 FPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205
             E  D   + VG  TL+  L  ++  G +   G+        P  +     L+ K + +
Sbjct: 227 -KEIADAIIDTVGPATLEPSLKALRRGGTLVLVGLP----GGGPIPLLPAFLLILKEISI 281

Query: 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEGLESAPAALIGLFSGQNVGKQV 263
            G             LE  +    EGK+    +E +   L+    A   +  G+  G+ V
Sbjct: 282 VG-----SLVGTRADLEEALDFAAEGKIKPEILETI--PLDEINEAYERMEKGKVRGRAV 334

Query: 264 V 264
           +
Sbjct: 335 I 335

Length = 339

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 67/294 (22%), Positives = 108/294 (36%), Gaps = 47/294 (15%)

Query: 4   ISGYGVAKV---LDSENPEFSKGDLVWGMT-----------GWEEYSLITAPYLFKIQHT 49
           I G   A     + S    F  GD V G              ++EY +  A    KI   
Sbjct: 57  ILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDN 116

Query: 50  DVPLSYYTG-ILGMPGMTAYVGFY----------EVCSAKHGECVFISAASGAVGQLVGQ 98
              +S+     L +  +TA +  +          +   A  G+ V I   S +VG L  Q
Sbjct: 117 ---ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQ 173

Query: 99  FAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK---EEADLNAALKRYFPEGIDVYFE 155
            AKL G  V+ +A  K+  DL+K   G D  F+Y       D+ AA        +D    
Sbjct: 174 LAKLAGYKVITTASPKNF-DLVK-SLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST 231

Query: 156 NVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH---NLMYLVSKRLRMEGFIVLD 212
               +     L      G++ +   + +   +  +GV     L Y V   +  +     +
Sbjct: 232 PESAQLCAEALGRSG-GGKLVSLLPVPE-ETEPRKGVKVKFVLGYTVFGEIPEDR----E 285

Query: 213 HYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264
              ++ K+L      ++EGKL    V  +  GLE     L  L  G+  G+++V
Sbjct: 286 FGEVFWKYLP---ELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLV 336

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 18/152 (11%)

Query: 31  GWEEYSLITAPYLFKIQHTDVPLSYYTGI---LGMPGMTAYVGFYEVCSAKHGECVFISA 87
           G+ EY ++    LFKI     P S    +   L +  +TAY           GE V +  
Sbjct: 117 GYAEYIVVPEKNLFKI-----PDSISDELAASLPVAALTAYHALKTAGLGP-GETVVVFG 170

Query: 88  ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP 147
           ASG  G    Q AK++G  V+  +        LK +FG DE  +Y E  +    + +   
Sbjct: 171 ASGNTGIFAVQLAKMMGAEVIAVSRKDW----LK-EFGADEVVDYDEVEEKVKEITKMA- 224

Query: 148 EGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
              DV   ++G    D  L  +   GR+   G
Sbjct: 225 ---DVVINSLGSSFWDLSLSVLGRGGRLVTFG 253

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 59/267 (22%), Positives = 102/267 (38%), Gaps = 24/267 (8%)

Query: 8   GVAKVLD--SENPEFSKGDLV----WGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILG 61
           GV  V++  S       G  V       T W+EY +  A  L  +  +          + 
Sbjct: 64  GVGVVVEVGSGVSGLLVGQRVLPLGGEGT-WQEYVVAPADDLIPVPDSISDEQAAMLYI- 121

Query: 62  MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
            P +TA++   E      G+ V  +AA+ AVG+++ Q AKLLG   +      ++V+ LK
Sbjct: 122 NP-LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK 180

Query: 122 NKFGFDEAFNYKEEADLNAALK-RYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
              G DE  +     DL   +K      G  +  + VGG++   +  +++  G +   G+
Sbjct: 181 AL-GADEVIDS-SPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGL 238

Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY------HLYPKFLEMIIPHIKEGKLV 234
           +S   +  P  V      + K + + GF  L  +          +    +I  ++ G L 
Sbjct: 239 LSGEPVPFPRSV-----FIFKDITVRGFW-LRQWLHSATKEAKQETFAEVIKLVEAGVLT 292

Query: 235 YVEDMAEGLESAPAALIGLFSGQNVGK 261
                   LE    A+         GK
Sbjct: 293 TPVGAKFPLEDFEEAVAAAEQPGRGGK 319

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 21/158 (13%)

Query: 31  GWEEYSLITAPYLFKIQH--TDV-----PLSYYTGILGMPGMTAYVGFYEVCSAKHGECV 83
           G+ EY+++ A   + +    +DV     P SY T    M          E      GE V
Sbjct: 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTA-ENM---------LERAGVGAGETV 181

Query: 84  FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK 143
            ++ ASG VG  + Q AK  G  V+  AG   K + ++   G D       +A L A  K
Sbjct: 182 LVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVR-ALGADTV--ILRDAPLLADAK 237

Query: 144 RYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
               E +DV  + VGG     +L  ++  GR    G I
Sbjct: 238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAI 275

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
           G+T Y    +    K  E     AA+G VG +  Q+AK LG  ++G+ GS  K    K  
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184

Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRG 173
            G  +  NY+EE  +    +    + + V +++VG  T +A L  ++ RG
Sbjct: 185 -GAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRG 233

Length = 327

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 17/167 (10%)

Query: 20  FSKGDLVWGMT---GWEEYSLITAPYLFKI-QHTDVPLSYYTGILGMP--GMTAYVGFYE 73
           F  GD V  +T   G  EY  + A YL  + +  D         + +    +TAY   + 
Sbjct: 79  FEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDA-----AEAVCLVLNYVTAYQMLHR 133

Query: 74  VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133
                 G+ V I  ASG VGQ + + A L G  V G+A S+     L+         +Y 
Sbjct: 134 AAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAALRELGA--TPIDY- 189

Query: 134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
                +       P G+DV F+ VGG++ +     +   G +   G 
Sbjct: 190 --RTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGG 234

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 11/179 (6%)

Query: 89  SGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP 147
           +G +G L    AKLLG   V+    S ++++L K   G D   N  E+      L+    
Sbjct: 177 AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGG 236

Query: 148 EGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME 206
            G DV  E VG    LD  L  ++  G +   G+         +       +VSK L + 
Sbjct: 237 RGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYG-----GEDIPLPAGLVVSKELTLR 291

Query: 207 GFIVLDHYHLYPKFLEMIIPH-IKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264
           G +       + + L+++    I   KL+        L+ A  A       +    +VV
Sbjct: 292 GSLRPSGREDFERALDLLASGKIDPEKLI---THRLPLDDAAEAYELFADRKEEAIKVV 347

Length = 350

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 37/191 (19%)

Query: 12  VLDSENPEFSKGDLV------WGMT---GWEEYSLITAPYLFKIQHTDVPLSYYTG---- 58
           V++S +P F  GD V       G++   G+ EY+ + A ++       VPL    G    
Sbjct: 69  VVESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWV-------VPLP--KGLTLK 119

Query: 59  ---ILGMPGMTAYVGFYEV----CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA 111
              ILG  G TA +  + +     + + G  V ++ A+G VG L       LG  VV S 
Sbjct: 120 EAMILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAVSILAKLGYEVVAST 178

Query: 112 GSKDKVDLLKNKFGFDEAFNYKEEAD--LNAALKRYFPEGIDVYFENVGGKTLDAVLPNM 169
           G  D  D LK K G  E    +E  +  +    K+ +   +D     VGGKTL  +L  +
Sbjct: 179 GKADAADYLK-KLGAKEVIPREELQEESIKPLEKQRWAGAVD----PVGGKTLAYLLSTL 233

Query: 170 KIRGRIAACGM 180
           +  G +A  G+
Sbjct: 234 QYGGSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 43/162 (26%), Positives = 58/162 (35%), Gaps = 19/162 (11%)

Query: 20  FSKGDLVWGMTGWE------EYSLITAPYLFKIQHTDVPLSYYTGI-LGMPGMTAYVGFY 72
           F  GD VWG           EY  +  P   ++      LS+     L   G+TA+    
Sbjct: 95  FEIGDEVWGAVPPWSQGTHAEY--VVVP-ENEVSKKPKNLSHEEAASLPYAGLTAWSALV 151

Query: 73  EVCSAKHGEC----VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE 128
            V            V I   SG VG    Q  K  G +V  +  S D + L+K   G D+
Sbjct: 152 NVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STDAIPLVK-SLGADD 209

Query: 129 AFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMK 170
             +Y  E       +R      DV  + VGG T    L  +K
Sbjct: 210 VIDYNNEDFEEELTER---GKFDVILDTVGGDTEKWALKLLK 248

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 21/176 (11%)

Query: 19  EFSKGDLVWGMTG---------WEEYSLITAPYLFKIQHTDVPLSYYTGILG-MPGM--T 66
            F+ G  V    G         + EY+L+    ++ I   D  LS+    L  +P    T
Sbjct: 75  TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAI---DSDLSW--AELAALPETYYT 129

Query: 67  AYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF 126
           A+   +     + G+ + I   + +VG    + AK LG  V  +  S ++  LLK + G 
Sbjct: 130 AWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGA 188

Query: 127 DEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           DE     ++  +   L+   P G D   E VG  TL   L +++  G +   G++ 
Sbjct: 189 DEVV--IDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 10/103 (9%)

Query: 80  GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139
           G  V ++ ASG VG+   Q A L G +VV   GS  + + L+     +      E +   
Sbjct: 133 GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSG-- 190

Query: 140 AALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
                     +D+  ++VGG  L   L  +   G + + G  S
Sbjct: 191 --------APVDLVVDSVGGPQLARALELLAPGGTVVSVGSSS 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 28/194 (14%)

Query: 77  AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNY 132
            K GE V ++ A G VG    Q AK LG  V+    S+ K  ++  K+         F+ 
Sbjct: 160 VKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KYADYVIVGSKFS- 217

Query: 133 KEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGV 192
            EE       K+    G D+  E VG  TL+  L ++ + G+I   G     N+D P   
Sbjct: 218 -EEV------KKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIG-----NVD-PSPT 262

Query: 193 HNLM--YLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAAL 250
           ++L   Y++ K + + G I      +  + L++    + EGK+  V      L     AL
Sbjct: 263 YSLRLGYIILKDIEIIGHISATKRDV-EEALKL----VAEGKIKPVIGAEVSLSEIDKAL 317

Query: 251 IGLFSGQNVGKQVV 264
             L     +GK +V
Sbjct: 318 EELKDKSRIGKILV 331

Length = 334

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 6/154 (3%)

Query: 29  MTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAA 88
           M G  EY+++ A  L  +    +     + +LG  G TAY         + GE V +   
Sbjct: 139 MGGLAEYAVVPATALAPLP-ESLDY-TESAVLGCAGFTAYGALKHAADVRPGETVAVIGV 196

Query: 89  SGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP 147
            G VG    Q AK  G   + +     +K+   K + G     N  +E  + A  +    
Sbjct: 197 -GGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKEDAVAAIREITGG 254

Query: 148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM 180
            G+DV  E +G  +T    L  ++  GR    G+
Sbjct: 255 RGVDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 74/295 (25%), Positives = 112/295 (37%), Gaps = 79/295 (26%)

Query: 12  VLDSENPEFSKGDLV-----------WGMTGWEEYSLITAPYLFKIQHTDVPLSY----- 55
           V++S +P F  GD V           WG  G+ + + + A +L       VPL       
Sbjct: 69  VVESSSPRFKPGDRVVLTGWGVGERHWG--GYAQRARVKADWL-------VPLPEGLSAR 119

Query: 56  YTGILGMPGMTAYVGFYEVC---------SAKHGECVFISAASGAVGQL-VGQFAKLLGC 105
               +G  G TA +     C         +   G  V ++ A+G VG + V   A+L G 
Sbjct: 120 QAMAIGTAGFTAML-----CVMALEDHGVTPGDGP-VLVTGAAGGVGSVAVALLARL-GY 172

Query: 106 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAAL-KRYFPEGIDVYFENVGGKTLDA 164
            VV S G  ++ D L++  G  E  +  E ++    L K  +   +D     VGG TL  
Sbjct: 173 EVVASTGRPEEADYLRS-LGASEIIDRAELSEPGRPLQKERWAGAVDT----VGGHTLAN 227

Query: 165 VLPNMKIRGRIAACGMISQYNLDKPE-------------GVHNLMYLVSKRLRMEGFIVL 211
           VL   +  G +AACG+      D P              G+ ++M  + +R      +  
Sbjct: 228 VLAQTRYGGAVAACGLAG--GADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLAR 285

Query: 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
           D   L P  LE +   I              L   P A   + +GQ  G+ VV V
Sbjct: 286 D---LDPALLEALTREI-------------PLADVPDAAEAILAGQVRGRVVVDV 324

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 44/176 (25%), Positives = 59/176 (33%), Gaps = 20/176 (11%)

Query: 6   GY-GVAKVLD--SENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVP--LSYYTGIL 60
           GY  V +V++  S    F  GD V+      E  ++ A  L       +P  L      L
Sbjct: 25  GYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVP-----LPDGLPPERAAL 79

Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
                TA  G       + GE V +    G VG L  Q AK  G   V        VD  
Sbjct: 80  TALAATALNGV-RDAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREV------VGVDPD 131

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG-GKTLDAVLPNMKIRGRI 175
             +    EA    +              G DV  E  G    L+  L  ++ RGR+
Sbjct: 132 AARRELAEALGPADPV-AADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRV 186

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 15/171 (8%)

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
            +T Y         K GE V +    G +G    Q AK +G  V+     ++K++L K +
Sbjct: 150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-E 207

Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMIS 182
            G DE  N  +++  +         G DV F+ VG   T +     +K  GRI   G   
Sbjct: 208 LGADEVLNSLDDSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVG--- 263

Query: 183 QYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKL 233
              L + +   +L  L+++ LR     ++  +   P+ L  ++  I +GKL
Sbjct: 264 ---LGRDKLTVDLSDLIARELR-----IIGSFGGTPEDLPEVLDLIAKGKL 306

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 12/147 (8%)

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA +G  E    +  + V  +AA+ A+G+++ +  K  G  V+     K++VDLLK K 
Sbjct: 130 LTA-LGMLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KI 187

Query: 125 GFDEAFNYKEE---ADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
           G +   N  +     DL   + +       ++F+ VGG     +L  M     +   G +
Sbjct: 188 GAEYVLNSSDPDFLEDLKELIAK---LNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYL 244

Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGF 208
           S       E + + + L+ K   +EGF
Sbjct: 245 SG---KLDEPI-DPVDLIFKNKSIEGF 267

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
           G+T Y    +    K G+ V IS A G +G L  Q+AK +G  V+      +K++L K +
Sbjct: 151 GVTVYKAL-KKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208

Query: 124 FGFDEAFNYKEEADLNAALK 143
            G D   ++K+  D+ A  +
Sbjct: 209 LGADAFVDFKKSDDVEAVKE 228

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 61/287 (21%), Positives = 104/287 (36%), Gaps = 52/287 (18%)

Query: 17  NPEFSKGDLVWGMT----GWEEYSLITAPYLF-KIQHTDVPLSYY-TGILGMPGMTAY-- 68
           +P  S    +WG       + E++L+    L  K +H    L++      G+ G TAY  
Sbjct: 123 DPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKH----LTWEEAACPGLTGATAYRQ 178

Query: 69  -VGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK----------V 117
            VG +   + K G+ V I  A+G +G    Q A+  G   V    S +K           
Sbjct: 179 LVG-WNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEA 237

Query: 118 DLLKNKFGFD--------EAFN--YKEEADLNAAL-KRYFPEGIDVYFENVGGKTLDAVL 166
            + +N FG          +A     K        + +    E  D+ FE+ G  T    +
Sbjct: 238 VIDRNDFGHWGRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSV 297

Query: 167 PNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPK---FLEM 223
              +  G +  CG  + YN D     ++  YL  ++ R++G     H+    +      +
Sbjct: 298 YVCRRGGMVVICGGTTGYNHD-----YDNRYLWMRQKRIQG----SHFANLREAYEANRL 348

Query: 224 IIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV-APE 269
           +     +G++         LE    A   +    + G   V V AP 
Sbjct: 349 VA----KGRIDPTLSKTYPLEEIGQAHQDVHRNHHQGNVAVLVLAPR 391

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 44/152 (28%), Positives = 61/152 (40%), Gaps = 7/152 (4%)

Query: 31  GWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASG 90
           G+ EY L+    L ++      LS     L  P   A     E    + G+ V +    G
Sbjct: 119 GFAEYVLVPEESLHELPEN---LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PG 174

Query: 91  AVGQLVGQFAKLLGCYVVGSAGSKDKVDL-LKNKFGFDEAFNYKEEADLNAALKRYFPEG 149
            +G L  Q AKL G  VV     KD+V L +  + G D A N  EE       +    +G
Sbjct: 175 PIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGAD-AVNGGEEDLAELVNEITDGDG 233

Query: 150 IDVYFENVGG-KTLDAVLPNMKIRGRIAACGM 180
            DV  E  G    L+  L  ++  GRI   G+
Sbjct: 234 ADVVIECSGAVPALEQALELLRKGGRIVQVGI 265

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 12/141 (8%)

Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
            G DE  +Y  E    A       EG+DV  + VGG+TL   L  +K  GR+ + G    
Sbjct: 1   LGADEVIDYTTEDFEEAT----AGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGP-- 54

Query: 184 YNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGL 243
                   +        + +R      +          E +   ++ GKL  V D    L
Sbjct: 55  -----DLLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAE-LAELVEAGKLRPVIDRVFPL 108

Query: 244 ESAPAALIGLFSGQNVGKQVV 264
           E A  A   L SG+  GK V+
Sbjct: 109 EEAAEAHRYLESGRARGKVVL 129

Length = 129

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 78  KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD 137
             G+ V +  A G +G  V Q AK  G  V+      ++++  + + G D+  N  +E D
Sbjct: 158 TAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-D 214

Query: 138 LNAALKRYFP-EGIDVYFENVG 158
           + A L+     EG DV  +  G
Sbjct: 215 VAARLRELTDGEGADVVIDATG 236

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 78  KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEA 136
             G+ V +  A G +G L  Q+ K+LG   V+      +K+ + + + G D+  N KEE 
Sbjct: 158 TLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE- 214

Query: 137 DLNAALKRYFPEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACG 179
           D+    +     G D+  E  G   T++  L   +  G++   G
Sbjct: 215 DVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVG 258

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 24/172 (13%)

Query: 70  GFY--EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKVDLLKNKF 124
           GF+  E+   K G  V +   +G VG      A+LLG      V S  + +++DL K + 
Sbjct: 156 GFHGAELAGIKPGSTVAV-IGAGPVGLCAVAGARLLGAARIIAVDS--NPERLDLAK-EA 211

Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQ 183
           G  +  N K    +   L+     G+D   E VG  +T +  +  ++  G IA  G+   
Sbjct: 212 GATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGV--- 268

Query: 184 YNLDKPEGVHNL--MYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKL 233
               KP+ +  L   +  +   +     V          +  ++  I+EGK+
Sbjct: 269 --YGKPDPLPLLGEWFGKNLTFKTGLVPVRAR-------MPELLDLIEEGKI 311

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 5/132 (3%)

Query: 28  GMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISA 87
           G + + EY+++    L KI   D PL     +LG    T           + G+ V +  
Sbjct: 136 GCSTFAEYTVVHEISLVKIDP-DAPLEK-ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG 193

Query: 88  ASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF 146
             G VG    Q AK  G   ++    + +K++L K KFG     N KE  D+  A+    
Sbjct: 194 L-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVELT 251

Query: 147 PEGIDVYFENVG 158
             G D  FE VG
Sbjct: 252 DGGADYAFECVG 263

Length = 366

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	269
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.98
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.98
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.98
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.98
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.98
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.97
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.97
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.97
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.97
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.97
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.97
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.97
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.97
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.97
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.97
PRK10083	339	putative oxidoreductase; Provisional	99.97
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.97
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.97
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.97
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.97
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.97
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.97
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.97
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.97
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.97
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.97
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.97
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.97
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.97
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.96
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.96
PLN02702	364	L-idonate 5-dehydrogenase	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.96
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.96
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.96
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.96
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.95
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.95
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.95
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.82
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.65
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.51
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.41
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.73
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.68
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.68
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.66
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	98.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.49
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.48
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.43
PRK08324	681	short chain dehydrogenase; Validated	98.43
PLN02494	477	adenosylhomocysteinase	98.41
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.38
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.33
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.32
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.31
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.27
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.27
PRK05693	274	short chain dehydrogenase; Provisional	98.27
PRK12742	237	oxidoreductase; Provisional	98.25
PRK06182	273	short chain dehydrogenase; Validated	98.22
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.2
PRK08265	261	short chain dehydrogenase; Provisional	98.15
PRK05993	277	short chain dehydrogenase; Provisional	98.11
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	98.09
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.08
PRK08339	263	short chain dehydrogenase; Provisional	98.08
PRK05872	296	short chain dehydrogenase; Provisional	98.06
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.04
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	98.02
PRK06057	255	short chain dehydrogenase; Provisional	98.0
PRK07109	334	short chain dehydrogenase; Provisional	98.0
PRK06198	260	short chain dehydrogenase; Provisional	97.97
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.97
PRK06139	330	short chain dehydrogenase; Provisional	97.96
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.95
PRK06484	520	short chain dehydrogenase; Validated	97.95
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.94
PRK07060	245	short chain dehydrogenase; Provisional	97.93
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.93
PRK07825	273	short chain dehydrogenase; Provisional	97.91
PLN03209	576	translocon at the inner envelope of chloroplast su	97.91
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.9
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.88
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.88
PLN02780	320	ketoreductase/ oxidoreductase	97.88
PRK12939	250	short chain dehydrogenase; Provisional	97.88
PRK07576	264	short chain dehydrogenase; Provisional	97.88
PRK08017	256	oxidoreductase; Provisional	97.86
PRK07806	248	short chain dehydrogenase; Provisional	97.86
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.86
PRK07062	265	short chain dehydrogenase; Provisional	97.85
PRK12829	264	short chain dehydrogenase; Provisional	97.85
PRK05867	253	short chain dehydrogenase; Provisional	97.84
PRK07063	260	short chain dehydrogenase; Provisional	97.83
PRK06196	315	oxidoreductase; Provisional	97.83
PRK08177	225	short chain dehydrogenase; Provisional	97.83
PRK05854	313	short chain dehydrogenase; Provisional	97.82
PRK06500	249	short chain dehydrogenase; Provisional	97.82
PRK05866	293	short chain dehydrogenase; Provisional	97.81
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.81
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.81
PRK06949	258	short chain dehydrogenase; Provisional	97.8
PRK05884	223	short chain dehydrogenase; Provisional	97.8
PRK07890	258	short chain dehydrogenase; Provisional	97.79
PRK07814	263	short chain dehydrogenase; Provisional	97.79
PRK07478	254	short chain dehydrogenase; Provisional	97.78
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.77
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.77
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.76
PRK07832	272	short chain dehydrogenase; Provisional	97.76
PRK06180	277	short chain dehydrogenase; Provisional	97.75
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.75
PRK09186	256	flagellin modification protein A; Provisional	97.75
PRK07831	262	short chain dehydrogenase; Provisional	97.74
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.73
PRK06841	255	short chain dehydrogenase; Provisional	97.73
PRK07904	253	short chain dehydrogenase; Provisional	97.72
PRK08267	260	short chain dehydrogenase; Provisional	97.71
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.71
PRK07326	237	short chain dehydrogenase; Provisional	97.7
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.7
PRK06953	222	short chain dehydrogenase; Provisional	97.7
PRK08703	239	short chain dehydrogenase; Provisional	97.7
PRK07024	257	short chain dehydrogenase; Provisional	97.7
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.7
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.7
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.69
PRK06484	520	short chain dehydrogenase; Validated	97.69
PRK06194	287	hypothetical protein; Provisional	97.69
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.69
PRK07677	252	short chain dehydrogenase; Provisional	97.68
PRK05717	255	oxidoreductase; Validated	97.68
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.68
PRK10538	248	malonic semialdehyde reductase; Provisional	97.67
PRK06128	300	oxidoreductase; Provisional	97.67
PLN02253	280	xanthoxin dehydrogenase	97.67
PRK12828	239	short chain dehydrogenase; Provisional	97.66
PRK05876	275	short chain dehydrogenase; Provisional	97.66
PRK08589	272	short chain dehydrogenase; Validated	97.66
PRK09242	257	tropinone reductase; Provisional	97.65
PRK06483	236	dihydromonapterin reductase; Provisional	97.65
PRK07067	257	sorbitol dehydrogenase; Provisional	97.65
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.64
PRK06197	306	short chain dehydrogenase; Provisional	97.64
PRK09072	263	short chain dehydrogenase; Provisional	97.63
PRK09291	257	short chain dehydrogenase; Provisional	97.63
PRK07774	250	short chain dehydrogenase; Provisional	97.62
PRK06125	259	short chain dehydrogenase; Provisional	97.62
PRK08862	227	short chain dehydrogenase; Provisional	97.62
PRK07035	252	short chain dehydrogenase; Provisional	97.62
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.61
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.61
PRK06720	169	hypothetical protein; Provisional	97.61
PRK06172	253	short chain dehydrogenase; Provisional	97.61
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.61
PRK06482	276	short chain dehydrogenase; Provisional	97.61
PRK08643	256	acetoin reductase; Validated	97.61
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.6
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.6
PRK06179	270	short chain dehydrogenase; Provisional	97.59
PRK06138	252	short chain dehydrogenase; Provisional	97.59
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.58
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	97.58
PRK08251	248	short chain dehydrogenase; Provisional	97.58
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.57
PRK07454	241	short chain dehydrogenase; Provisional	97.57
PRK08263	275	short chain dehydrogenase; Provisional	97.57
PRK06914	280	short chain dehydrogenase; Provisional	97.56
KOG0725	270	consensus Reductases with broad range of substrate	97.55
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.55
PRK07985	294	oxidoreductase; Provisional	97.54
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.54
PRK05875	276	short chain dehydrogenase; Provisional	97.54
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.54
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.53
PRK06181	263	short chain dehydrogenase; Provisional	97.53
PRK07074	257	short chain dehydrogenase; Provisional	97.53
PRK06701	290	short chain dehydrogenase; Provisional	97.52
PRK12747	252	short chain dehydrogenase; Provisional	97.52
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.52
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.51
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.5
PRK08628	258	short chain dehydrogenase; Provisional	97.5
COG4122	219	Predicted O-methyltransferase [General function pr	97.5
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.5
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.5
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.5
PRK12367	245	short chain dehydrogenase; Provisional	97.5
PRK04148	134	hypothetical protein; Provisional	97.5
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.49
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.49
PRK06101	240	short chain dehydrogenase; Provisional	97.48
PRK12746	254	short chain dehydrogenase; Provisional	97.48
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.47
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.46
PRK06114	254	short chain dehydrogenase; Provisional	97.45
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.45
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.44
PRK12937	245	short chain dehydrogenase; Provisional	97.44
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.44
PRK07856	252	short chain dehydrogenase; Provisional	97.44
PRK07791	286	short chain dehydrogenase; Provisional	97.44
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.44
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.44
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.43
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.43
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.41
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.4
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.4
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.4
PRK06398	258	aldose dehydrogenase; Validated	97.4
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.4
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.4
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.4
PRK08226	263	short chain dehydrogenase; Provisional	97.39
KOG1208	314	consensus Dehydrogenases with different specificit	97.39
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.39
PRK06940	275	short chain dehydrogenase; Provisional	97.37
PRK07577	234	short chain dehydrogenase; Provisional	97.36
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.36
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.36
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.35
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.35
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.35
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.35
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	97.35
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.35
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.35
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.33
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.33
PRK08303	305	short chain dehydrogenase; Provisional	97.32
CHL00194	317	ycf39 Ycf39; Provisional	97.31
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	97.31
PRK05650	270	short chain dehydrogenase; Provisional	97.31
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.31
PLN02476	278	O-methyltransferase	97.31
PRK07102	243	short chain dehydrogenase; Provisional	97.3
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.29
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.27
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.27
PRK08278	273	short chain dehydrogenase; Provisional	97.27
PRK05599	246	hypothetical protein; Provisional	97.27
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.27
PRK07775	274	short chain dehydrogenase; Provisional	97.26
PRK12743	256	oxidoreductase; Provisional	97.26
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	97.26
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.26
PRK09135	249	pteridine reductase; Provisional	97.24
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.24
PRK06523	260	short chain dehydrogenase; Provisional	97.24
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	97.24
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.23
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.23
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.22
PRK07069	251	short chain dehydrogenase; Validated	97.22
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	97.22
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.21
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.2
PRK08264	238	short chain dehydrogenase; Validated	97.2
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.18
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.17
PRK05855	582	short chain dehydrogenase; Validated	97.17
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.17
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	97.16
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.15
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	97.15
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	97.15
PLN00015	308	protochlorophyllide reductase	97.15
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	97.14
TIGR00438	188	rrmJ cell division protein FtsJ.	97.14
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.13
PRK09134	258	short chain dehydrogenase; Provisional	97.13
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.12
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.12
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.12
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	97.11
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.1
PRK07201	657	short chain dehydrogenase; Provisional	97.1
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.1
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.1
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.09
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	97.08
PRK08219	227	short chain dehydrogenase; Provisional	97.08
PRK00811	283	spermidine synthase; Provisional	97.06
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	97.03
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.03
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.02
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	97.01
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.01
PRK07402	196	precorrin-6B methylase; Provisional	97.01
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.0
PLN02366	308	spermidine synthase	96.99
PRK11207	197	tellurite resistance protein TehB; Provisional	96.99
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.98
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.98
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.97
PLN02589	247	caffeoyl-CoA O-methyltransferase	96.96
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.95
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.95
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.94
PRK07578	199	short chain dehydrogenase; Provisional	96.94
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.93
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.93
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.92
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.91
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.9
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.88
PRK06123	248	short chain dehydrogenase; Provisional	96.87
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.86
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.86
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.84
PLN02244	340	tocopherol O-methyltransferase	96.82
COG2910	211	Putative NADH-flavin reductase [General function p	96.8
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.79
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.78
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	96.78
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.77
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.76
PRK12744	257	short chain dehydrogenase; Provisional	96.75
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.74
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.74
PRK07041	230	short chain dehydrogenase; Provisional	96.74
PLN02233	261	ubiquinone biosynthesis methyltransferase	96.73
PRK07023	243	short chain dehydrogenase; Provisional	96.73
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.72
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.72
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.72
PLN00016	378	RNA-binding protein; Provisional	96.72
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.7
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.7
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.68
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.68
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	96.67
PLN03075	296	nicotianamine synthase; Provisional	96.67
PRK14982	340	acyl-ACP reductase; Provisional	96.67
PRK00536	262	speE spermidine synthase; Provisional	96.66
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.66
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.65
PRK12827	249	short chain dehydrogenase; Provisional	96.64
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.61
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.59
PRK04457	262	spermidine synthase; Provisional	96.59
PRK14967	223	putative methyltransferase; Provisional	96.58
PLN02653	340	GDP-mannose 4,6-dehydratase	96.57
PRK08655	437	prephenate dehydrogenase; Provisional	96.57
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.56
COG1028	251	FabG Dehydrogenases with different specificities (	96.56
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	96.56
PRK08309	177	short chain dehydrogenase; Provisional	96.54
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.54
PRK06924	251	short chain dehydrogenase; Provisional	96.52
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.51
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.51
PRK08618	325	ornithine cyclodeaminase; Validated	96.51
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.51
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.5
PRK01581	374	speE spermidine synthase; Validated	96.5
PLN00203	519	glutamyl-tRNA reductase	96.5
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.47
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.47
PLN02686	367	cinnamoyl-CoA reductase	96.46
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.46
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	96.45
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	96.45
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	96.44
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.44
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.43
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.42
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.37
PRK08317	241	hypothetical protein; Provisional	96.37
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	96.35
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	96.35
PRK07574	385	formate dehydrogenase; Provisional	96.35
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.35
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.34
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.33
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.32
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	96.32
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.32
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.31
PRK14968	188	putative methyltransferase; Provisional	96.27
PLN03139	386	formate dehydrogenase; Provisional	96.27
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	96.26
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	96.26
PRK06849	389	hypothetical protein; Provisional	96.26
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.25
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.25
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	96.23
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	96.23
PRK14903	431	16S rRNA methyltransferase B; Provisional	96.22
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	96.22
PRK13243	333	glyoxylate reductase; Reviewed	96.21
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.2
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	96.18
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	96.18
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	96.18
PLN02214	342	cinnamoyl-CoA reductase	96.16
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	96.15
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	96.14
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.13
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	96.12
COG3963	194	Phospholipid N-methyltransferase [Lipid metabolism	96.11
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.11
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.11
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.11
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	96.09
PRK04266	226	fibrillarin; Provisional	96.09
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	96.08
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	96.06
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.06

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=4e-44  Score=288.27  Aligned_cols=244  Identities=25%  Similarity=0.347  Sum_probs=218.7

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEe-c------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWG-M------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~-~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      |++|+|.++|++|+.|++||||-. +                              |+|+||+++|+.+++++ |++++.
T Consensus        64 EivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~i-P~~~d~  142 (339)
T COG1064          64 EIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKI-PEGLDL  142 (339)
T ss_pred             ceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEEC-CCCCCh
Confidence            556778889999999999999954 2                              89999999999999999 999665


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . .+|++.|++.|+|++| +..+++||++|+|.|+ ||+|++++|+|+++|++|+++++++++.++++ ++|++++++.+
T Consensus       143 ~-~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~  218 (339)
T COG1064         143 A-EAAPLLCAGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSS  218 (339)
T ss_pred             h-hhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcC
Confidence            4 6899999999999999 5589999999999999 79999999999999999999999999999999 99999999987


Q ss_pred             ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337          134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH  213 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (269)
                      +. +..+.+++.    +|+++||++..+++.+++.|+++|+++.+|.+..    .+....+...++.+++++.|+..++ 
T Consensus       219 ~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~-  288 (339)
T COG1064         219 DS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT-  288 (339)
T ss_pred             Cc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC-
Confidence            55 777777663    9999999998899999999999999999998631    1223355677889999999999877 


Q ss_pred             ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                          ..++++++++..+|+++|.+.+.++++++++|++.|.+++..||+|+++.
T Consensus       289 ----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         289 ----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             ----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence                78899999999999999999778999999999999999999999999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.5e-43  Score=291.53  Aligned_cols=257  Identities=31%  Similarity=0.478  Sum_probs=222.5

Q ss_pred             CCcccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337            2 QPISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC   75 (269)
Q Consensus         2 ~~i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~   75 (269)
                      +..|++|+|+++|++|+.|++||+|+.+      |+|+||+.+|++.++++ |++++.. ++|++++.+.|||++|....
T Consensus        61 ~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~  138 (326)
T COG0604          61 PGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPL-PDGLSFE-EAAALPLAGLTAWLALFDRA  138 (326)
T ss_pred             ccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhc
Confidence            3478899999999999999999999887      69999999999999999 9996555 69999999999999999989


Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi  154 (269)
                      +++++++|||+||+|++|++++|+||++|+++++++.++++.++++ ++|++++++|.+. ++.+.+++.+++ ++|+|+
T Consensus       139 ~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         139 GLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEE
Confidence            9999999999999999999999999999987777777888888888 9999999999997 899999999988 999999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCe
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~  233 (269)
                      |++|+..+..+++.|+++|+++.+|...+    ......+...++.+.....+...... +....+.++.+.+++.+|.+
T Consensus       217 D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l  292 (326)
T COG0604         217 DTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL  292 (326)
T ss_pred             ECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999998652    12223445667778888877766532 24556788999999999999


Q ss_pred             eeeeehccccccHHHHHHHHhc-CCCcceEEEEe
Q 024337          234 VYVEDMAEGLESAPAALIGLFS-GQNVGKQVVAV  266 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv~~  266 (269)
                      ++.+..+|||++..++...... ++..||+|+++
T Consensus       293 ~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         293 KPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             cceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            9999999999996555444433 58899999974

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.3e-42  Score=262.09  Aligned_cols=259  Identities=23%  Similarity=0.335  Sum_probs=226.7

Q ss_pred             CCcccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            2 QPISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         2 ~~i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      |..|++|+|+.+|++|+++++||||+-+   |.|+|+..+|...++++ |+.+++. .+|++...+.|||..+++..+++
T Consensus        68 pGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vk  145 (336)
T KOG1197|consen   68 PGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVK  145 (336)
T ss_pred             CCcccceEEEEecCCccccccccEEEEeccchhhheeccccceeeccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCC
Confidence            4578999999999999999999999876   89999999999999999 8885544 58889999999999999999999


Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~  157 (269)
                      +|++||++.|+||+|++++|+++..|++++++..+.++++.++ +.|+++.|+++.+ |+.+++.+++++ |+|+++|.+
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsv  223 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSV  223 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccc
Confidence            9999999999999999999999999999999999999999999 9999999999998 999999999988 999999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCCCee
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      |.+++..++.+|++.|.+|.+|..++     ...++.+..+..+++.+..-.+..+   +........+++.++.+|.++
T Consensus       224 G~dt~~~sl~~Lk~~G~mVSfG~asg-----l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk  298 (336)
T KOG1197|consen  224 GKDTFAKSLAALKPMGKMVSFGNASG-----LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLK  298 (336)
T ss_pred             cchhhHHHHHHhccCceEEEeccccC-----CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccc
Confidence            99999999999999999999998653     3344555555556665544333223   222333456777788899999


Q ss_pred             eeeehccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      +.+.++|||+++.+|+.+++++...||+++.+.+|
T Consensus       299 ~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~  333 (336)
T KOG1197|consen  299 IHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE  333 (336)
T ss_pred             eeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence            99999999999999999999999999999988764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3e-41  Score=282.57  Aligned_cols=265  Identities=68%  Similarity=1.151  Sum_probs=221.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCc--ee--ecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPY--LF--KIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~--~~--~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      ++++|+|..+|++++.|++||+|+++|+|+||.+++.+.  ++  ++ |++++.+.++|++++++.|||+++...+++++
T Consensus        80 ~~~~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~  158 (348)
T PLN03154         80 IEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKK  158 (348)
T ss_pred             eEeeEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCC
Confidence            467899999999999999999999999999999999863  53  45 77755442477999999999999987788999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +++|||+|++|++|++++|+||.+|++|+++++++++.+.+++++|++.++|+++..++.+.+++.+++++|++|||+|+
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~  238 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGG  238 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCH
Confidence            99999999999999999999999999999999999999988647999999998742167777777776689999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeeh
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM  239 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  239 (269)
                      ..+..++++++++|+++.+|...+..........++..++.+++++.|+....+.....+.++.+++++++|++++.+..
T Consensus       239 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~  318 (348)
T PLN03154        239 DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDM  318 (348)
T ss_pred             HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceec
Confidence            89999999999999999998754321110001124556788899999887654433345678899999999999988888


Q ss_pred             ccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       240 ~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      +|+|+++++|++.+.+++..||+|++++++
T Consensus       319 ~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        319 SEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             ccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            899999999999999999999999998764

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.3e-39  Score=252.51  Aligned_cols=264  Identities=51%  Similarity=0.860  Sum_probs=237.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEE
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECV   83 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~v   83 (269)
                      +.|.++-..+-|+.+.|++||.|.+..+|+||..++.+.+.+++|...++++....|..++.|||.+|.+.++.++|++|
T Consensus        75 ~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~Getv  154 (340)
T COG2130          75 MVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETV  154 (340)
T ss_pred             eECCeeEEEEecCCCCCCCCCEEEecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEE
Confidence            45544455567888999999999999999999999999999997666667766889999999999999999999999999


Q ss_pred             EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhHh
Q 024337           84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLD  163 (269)
Q Consensus        84 lI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  163 (269)
                      +|.+|+|++|..+.|+||..|++|+.++.++++.+++.+.+|.+.++||+.+ ++.+.+++..+.++|+.||++|+..+.
T Consensus       155 vVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~D  233 (340)
T COG2130         155 VVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLD  233 (340)
T ss_pred             EEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHH
Confidence            9999999999999999999999999999999999999966999999999998 999999999999999999999999999


Q ss_pred             hhHhhhhcCCEEEEEeccccccCC-CCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeeeeehcc
Q 024337          164 AVLPNMKIRGRIAACGMISQYNLD-KPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYVEDMAE  241 (269)
Q Consensus       164 ~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~  241 (269)
                      ..+..|+..+|++.+|..+.|+.. .+..+..+..++.+.+++.|+...+. .....+..+++.+++++|+++...+..-
T Consensus       234 Av~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~d  313 (340)
T COG2130         234 AVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVD  313 (340)
T ss_pred             HHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehh
Confidence            999999999999999998888654 33445567788889999999998444 4455589999999999999999887777


Q ss_pred             ccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          242 GLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       242 ~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      .|+++++||..|.+|+.+||.|+++.+
T Consensus       314 GlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         314 GLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             hhhccHHHHHHHhcCCccceEEEEecC
Confidence            899999999999999999999999864

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.3e-38  Score=266.37  Aligned_cols=263  Identities=73%  Similarity=1.225  Sum_probs=217.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecC-CceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCE
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITA-PYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGEC   82 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~   82 (269)
                      ++|.|+++.+|++++.+++||+|+++|+|+||++++. ..++++||++++.+.+++++++++.|||+++.+.+++++|++
T Consensus        75 ~~g~~~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~  154 (338)
T cd08295          75 ITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGET  154 (338)
T ss_pred             EeccEEEEEEecCCCCCCCCCEEEecCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCE
Confidence            4567888889999999999999999999999999999 799999556655543578999999999999987789999999


Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhH
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTL  162 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~  162 (269)
                      |+|+|++|++|++++|+|+.+|++|+++++++++.+++++.+|+++++++.+..++.+.+++.+++++|++||++|+..+
T Consensus       155 VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~  234 (338)
T cd08295         155 VFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKML  234 (338)
T ss_pred             EEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHH
Confidence            99999999999999999999999999999999999999833999999987542167777777765689999999999889


Q ss_pred             hhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccc
Q 024337          163 DAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEG  242 (269)
Q Consensus       163 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  242 (269)
                      ..++++++++|+++.+|..................++.+++++.++....+.....+.++.+++++.+|.+++.+...|+
T Consensus       235 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  314 (338)
T cd08295         235 DAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADG  314 (338)
T ss_pred             HHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccC
Confidence            99999999999999998643211100001123355667778888766554433345678889999999999987777899


Q ss_pred             cccHHHHHHHHhcCCCcceEEEEe
Q 024337          243 LESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       243 ~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ++++++|++.+.+++..||+|+++
T Consensus       315 l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         315 LESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHHHHHhcCCCCceEEEEC
Confidence            999999999999999899999864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-38  Score=249.18  Aligned_cols=247  Identities=21%  Similarity=0.263  Sum_probs=211.9

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      |.+|+|.++|++|+++++||||..-                               |++++|++.++++++++ |++  +
T Consensus        68 EssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KL-Pd~--v  144 (354)
T KOG0024|consen   68 ESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKL-PDN--V  144 (354)
T ss_pred             ccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeC-CCC--C
Confidence            6789999999999999999999532                               89999999999999999 999  6


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +++.++|..++.++|+|. +++++++|+++||+|| |++|+.+...||.+|+ +|++++-.++|+++++ +||++.+.+.
T Consensus       145 s~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~  221 (354)
T KOG0024|consen  145 SFEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPS  221 (354)
T ss_pred             chhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeec
Confidence            667899999999999999 6799999999999999 9999999999999999 9999999999999999 8999877665


Q ss_pred             CCh---hhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeee
Q 024337          133 KEE---ADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG  207 (269)
Q Consensus       133 ~~~---~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (269)
                      ...   .++.+.+++..+. .+|+.|||+|. ..++.++..++.+|++++.+...      ....++......+++.+.|
T Consensus       222 ~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g  295 (354)
T KOG0024|consen  222 SHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRG  295 (354)
T ss_pred             cccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeee
Confidence            542   1445556665554 79999999996 88999999999999999988743      2344556678889999999


Q ss_pred             eeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCC-cceEEEEecC
Q 024337          208 FIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQN-VGKQVVAVAP  268 (269)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~~~  268 (269)
                      +..+.     +..+..+++++.+|++.  +.++..|+++++.+||+.++++.. .-|+++..++
T Consensus       296 ~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  296 SFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             eeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            87654     55799999999999876  568889999999999999998774 3488877653

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-38  Score=247.25  Aligned_cols=247  Identities=23%  Similarity=0.277  Sum_probs=214.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEE-ec-------------------------------------cceeeEEEecCCceee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVW-GM-------------------------------------TGWEEYSLITAPYLFK   45 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~-~~-------------------------------------g~~~~~~~v~~~~~~~   45 (269)
                      =|++|+|+++|++|+.|++||||= ++                                     |+||+|+++++.++++
T Consensus        71 HEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~k  150 (360)
T KOG0023|consen   71 HEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIK  150 (360)
T ss_pred             ceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEE
Confidence            467888999999999999999991 11                                     6799999999999999


Q ss_pred             cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337           46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG  125 (269)
Q Consensus        46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g  125 (269)
                      + |+++++. .+|++.|++.|+|.+| ...++.||+++.|.|+ ||+|.+++|+||++|.+|++++++..+.+.+-+.||
T Consensus       151 I-P~~~pl~-~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG  226 (360)
T KOG0023|consen  151 I-PENLPLA-SAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG  226 (360)
T ss_pred             C-CCCCChh-hccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC
Confidence            9 9997776 6999999999999999 5678999999999999 669999999999999999999998866666554899


Q ss_pred             CceeEecC-ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337          126 FDEAFNYK-EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR  204 (269)
Q Consensus       126 ~~~~~~~~-~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  204 (269)
                      ++..++.. ++ ++.+.+.+.+++.+|.+.+. ....++.++++++++|++|.+|.+..      ........+..+.++
T Consensus       227 Ad~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~  298 (360)
T KOG0023|consen  227 ADVFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKS  298 (360)
T ss_pred             cceeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEE
Confidence            99888777 55 88999998877777777766 45788999999999999999998642      334455677889999


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +.|+..+.     ....+++++++.++.+++++. ..+++++++|++.|.+++..+|.||+++.
T Consensus       299 I~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  299 IKGSIVGS-----RKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             EEeecccc-----HHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            99999877     677999999999999998874 67999999999999999999999999864

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=5.7e-37  Score=236.98  Aligned_cols=268  Identities=72%  Similarity=1.255  Sum_probs=243.2

Q ss_pred             CCcccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCce--eecC-CCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYL--FKIQ-HTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         2 ~~i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~--~~~~-p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      .||+|.|+-..+.++-+++++||.|+++-+|.||.+++++..  ++++ |.++++++-..++..++.|||..+++.+..+
T Consensus        73 ~pi~g~GV~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk  152 (343)
T KOG1196|consen   73 KPIDGFGVAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPK  152 (343)
T ss_pred             cEecCCceEEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCC
Confidence            368999998888888899999999999999999999988744  4432 4567788668899999999999999999999


Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|++|+|-||+|++|+++.|+|+.+|+.|+..+.|+++..+++.++|.+..|||.++.+....+++..++++|+.||.+|
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG  232 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG  232 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence            99999999999999999999999999999999999999999998999999999999657888888888889999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeee
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED  238 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  238 (269)
                      +..+...+..|+..||++.+|..+.++...+....+...++.+++++.|+...++.+...+.+..+..++++|+++..-+
T Consensus       233 G~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ed  312 (343)
T KOG1196|consen  233 GKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVED  312 (343)
T ss_pred             cHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehh
Confidence            99999999999999999999999988887776666788899999999999888888888899999999999999998877


Q ss_pred             hccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          239 MAEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       239 ~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      ..-.|++.++||..|.+|+..||.++.+..|
T Consensus       313 i~~Glen~P~A~vglf~GkNvGKqiv~va~E  343 (343)
T KOG1196|consen  313 IADGLENGPSALVGLFHGKNVGKQLVKVARE  343 (343)
T ss_pred             HHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence            6678999999999999999999999988753

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=9e-37  Score=258.12  Aligned_cols=250  Identities=18%  Similarity=0.248  Sum_probs=213.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++++.+++||+|+..                                                   |+|
T Consensus        67 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~  146 (371)
T cd08281          67 HEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAF  146 (371)
T ss_pred             ccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccc
Confidence            46789999999999999999999752                                                   589


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+.++++.++++ |++++.. +++.+++++.+||+++...++++++++|+|.|+ |++|++++|+|+.+|+ +|++++
T Consensus       147 aey~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~  223 (371)
T cd08281         147 AEYAVVSRRSVVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD  223 (371)
T ss_pred             eeeEEecccceEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc
Confidence            99999999999999 9985544 577888899999999877788999999999986 9999999999999999 799999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPE  190 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  190 (269)
                      .++++.++++ ++|+++++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|....    ...
T Consensus       224 ~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~  297 (371)
T cd08281         224 LNEDKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDP----EAR  297 (371)
T ss_pred             CCHHHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCC----Cce
Confidence            9999999998 9999999998876 78888888776689999999996 788999999999999999987432    111


Q ss_pred             CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      ...+...++.+++++.++....+.  .++.+..+++++.+|++++  .++++|+|+|+++|++.+.+++..+|+|+
T Consensus       298 ~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         298 LSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             eeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            234556788899999998765432  2456888999999999975  46788999999999999999988877663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2.1e-36  Score=253.82  Aligned_cols=262  Identities=39%  Similarity=0.681  Sum_probs=209.2

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec-cceeeEEEecCCceeecCCCCCC---cchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM-TGWEEYSLITAPYLFKIQHTDVP---LSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~~p~~~~---~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      ..|++|+|+++|++++.|++||+|+++ ++|+||++++++.++++ |++++   +++.+++++.++.|||+++.+.++++
T Consensus        73 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~  151 (345)
T cd08293          73 VLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHIT  151 (345)
T ss_pred             ceEeeEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHHeEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCC
Confidence            367899999999999999999999988 58999999999999999 87642   22235678889999999997778888


Q ss_pred             CC--CEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~--~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ++  ++|||+|++|++|++++|+|+++|+ +|+++++++++.+++++++|+++++++++. ++.+.+++.+++++|++||
T Consensus       152 ~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid  230 (345)
T cd08293         152 PGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFD  230 (345)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEE
Confidence            77  9999999999999999999999999 899999999999998845999999998876 8888888877668999999


Q ss_pred             CCCchhHhhhHhhhhcCCEEEEEeccccccCCCCC-Cccc--hHH-HhhcceeeeeeeecccccchHHHHHHHHHHHHCC
Q 024337          156 NVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPE-GVHN--LMY-LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       156 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  231 (269)
                      |+|+..+..++++++++|+++.+|........... ....  ... ...+++++.............+.++.+++++.+|
T Consensus       231 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  310 (345)
T cd08293         231 NVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEG  310 (345)
T ss_pred             CCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCC
Confidence            99997789999999999999999853221000000 0111  111 2234555444433232333456688889999999


Q ss_pred             CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .+++.....++++++++|++.+.+++..||+|+++
T Consensus       311 ~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         311 KLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             CccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            99877666679999999999999998889999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=4.6e-36  Score=251.20  Aligned_cols=244  Identities=23%  Similarity=0.275  Sum_probs=207.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|+.+++||+|+.                               .|+|+||+.++.+.++++ |++++
T Consensus        60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~-P~~~~  138 (339)
T cd08239          60 HEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPL-PDDLS  138 (339)
T ss_pred             cCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEEC-CCCCC
Confidence            4688999999999999999999975                               278999999999999999 98855


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      .. +++++++++.|||+++ ...+++++++|+|+|+ |++|++++|+|+.+|++ |+++++++++.++++ ++|++++++
T Consensus       139 ~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~  214 (339)
T cd08239         139 FA-DGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVIN  214 (339)
T ss_pred             HH-HhhhhcchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEc
Confidence            44 5778899999999999 4578899999999987 99999999999999997 999999999999998 999999999


Q ss_pred             cCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          132 YKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      +++. + .+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|....     .. ......++.+++++.++.
T Consensus       215 ~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~-~~~~~~~~~~~~~i~g~~  286 (339)
T cd08239         215 SGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-----LT-IEVSNDLIRKQRTLIGSW  286 (339)
T ss_pred             CCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-----cc-cCcHHHHHhCCCEEEEEe
Confidence            8875 6 6677777766 89999999998 456889999999999999987432     11 112345778899999887


Q ss_pred             ecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ...     .+.++.+++++.+|.+++  .++++|+++++++|++.+.++. .||+|+.+
T Consensus       287 ~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         287 YFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             cCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            643     467899999999998864  6778899999999999998876 68999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=8.3e-36  Score=248.69  Aligned_cols=260  Identities=47%  Similarity=0.808  Sum_probs=212.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCC---ceeecCCCCCCc--c--hhhhhcCCcchhHHHHHHHhhc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP---YLFKIQHTDVPL--S--YYTGILGMPGMTAYVGFYEVCS   76 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~~~~~p~~~~~--~--~~~a~l~~~~~~a~~~l~~~~~   76 (269)
                      +.|.++.+.|-+.++.+++||+|+++++|++|+.++.+   .++++ |++++.  +  ...+++++++.|||+++.+.++
T Consensus        62 v~G~e~~G~V~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~  140 (329)
T cd08294          62 MIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICK  140 (329)
T ss_pred             EecceEEEEEecCCCCCCCCCEEEeeCCeeeEEEECCccccceEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcC
Confidence            34444444444566789999999999999999999999   99999 988552  1  1235789999999999988889


Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++++++|+|+|++|++|++++|+|+.+|++|+++++++++.++++ ++|+++++++++. ++.+.+++.+++++|++||+
T Consensus       141 ~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~  218 (329)
T cd08294         141 PKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDN  218 (329)
T ss_pred             CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEEC
Confidence            999999999999999999999999999999999999999999999 8999999999876 88888888776689999999


Q ss_pred             CCchhHhhhHhhhhcCCEEEEEeccccccCCCCC-CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee
Q 024337          157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPE-GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  235 (269)
                      +|+..+..++++++++|+++.+|........... .......++.+++++.++....+.....+.++.+++++.+|.+++
T Consensus       219 ~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~  298 (329)
T cd08294         219 VGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKY  298 (329)
T ss_pred             CCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcC
Confidence            9998899999999999999998854321110010 122344567788888887654432334566888999999999988


Q ss_pred             eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ....+++++++++|++.+.+++..||+++++
T Consensus       299 ~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         299 REHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             CcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            7667899999999999999999899999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2e-36  Score=239.02  Aligned_cols=248  Identities=23%  Similarity=0.255  Sum_probs=213.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      =||+|+|++||++|++++|||+|+..                                                   ++|
T Consensus        61 HEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stF  140 (366)
T COG1062          61 HEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTF  140 (366)
T ss_pred             cccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccc
Confidence            38999999999999999999999543                                                   389


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||.++++..+.++ +...|+. .++.+.|...|.+-++.+.+++++|+++.|+|. |++|++++|-|+..|+ ++++++
T Consensus       141 a~y~vv~~~s~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD  217 (366)
T COG1062         141 AEYTVVHEISLVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD  217 (366)
T ss_pred             hhheeecccceEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe
Confidence            99999999999999 5554444 477889999999999989999999999999998 9999999999999999 999999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPE  190 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  190 (269)
                      .+++++++++ +||+++.+|.++..+..+.+++++++++|++|||+|+ ..++.++++..++|+.+.+|....    ...
T Consensus       218 ~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~  292 (366)
T COG1062         218 INPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQE  292 (366)
T ss_pred             CCHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----Cce
Confidence            9999999999 9999999998875248899999999899999999998 899999999999999999998542    122


Q ss_pred             CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceE
Q 024337          191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQ  262 (269)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkv  262 (269)
                      ....+..+... .++.|+..+....  +.++..++++..+|++..  .+++.++|+|++|||+.|.+|+....+
T Consensus       293 i~~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~V  363 (366)
T COG1062         293 ISTRPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSV  363 (366)
T ss_pred             eecChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEE
Confidence            22344455554 8888888776532  567999999999998875  577789999999999999999977443

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.6e-35  Score=246.53  Aligned_cols=257  Identities=44%  Similarity=0.719  Sum_probs=205.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecC---CCCCCcchhh-hhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQ---HTDVPLSYYT-GILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~---p~~~~~~~~~-a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      .+++|+|.++|   +.+++||+|+++++|++|+.++.+.+.+++   |++++.. ++ +++++++.|||+++.+.+++++
T Consensus        63 ~~~~g~v~~~~---~~~~~GdrV~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~  138 (325)
T TIGR02825        63 QQVARVVESKN---VALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDTLPLS-LALGTVGMPGLTAYFGLLEICGVKG  138 (325)
T ss_pred             ceEEEEEEeCC---CCCCCCCEEEEecCceeeEEechhheEEccccccCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCC
Confidence            45566666655   469999999999999999999998876652   5664333 34 6799999999999988899999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +++|||+|++|++|++++|+|+.+|++|+++++++++.++++ ++|++.++++++..++.+.++..+++++|++|||+|+
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~  217 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG  217 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCH
Confidence            999999999999999999999999999999999999999998 8999999998763145555666655589999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCC-ccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeeee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEG-VHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYVE  237 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~  237 (269)
                      ..+..++++++++|+++.+|............ ......++.+++++.++....+ .....+.++++++++.+|.+++.+
T Consensus       218 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  297 (325)
T TIGR02825       218 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE  297 (325)
T ss_pred             HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce
Confidence            88899999999999999998643211100111 1123456667888887765433 223356788999999999999887


Q ss_pred             ehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          238 DMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       238 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      ...|+++++++|++.+.+++..||+|++
T Consensus       298 ~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       298 YVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             eccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            7889999999999999999989999973

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.7e-35  Score=249.20  Aligned_cols=250  Identities=19%  Similarity=0.242  Sum_probs=210.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------------------ccceeeEEEecC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------------------MTGWEEYSLITA   40 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~   40 (269)
                      -|++|+|+++|++++.+++||+|+.                                           .|+|+||+.+++
T Consensus        60 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~  139 (358)
T TIGR03451        60 HEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHA  139 (358)
T ss_pred             cceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEeh
Confidence            4678999999999999999999974                                           278999999999


Q ss_pred             CceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 024337           41 PYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDL  119 (269)
Q Consensus        41 ~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~  119 (269)
                      ++++++ |++++.. +++.+++.+.++|+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++
T Consensus       140 ~~~~~i-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~  216 (358)
T TIGR03451       140 GQCTKV-DPAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEW  216 (358)
T ss_pred             hheEEC-CCCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            999999 8885443 577888899999998877788999999999986 9999999999999999 59999999999999


Q ss_pred             HHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHH
Q 024337          120 LKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMY  197 (269)
Q Consensus       120 ~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  197 (269)
                      ++ ++|+++++++.+. ++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|....    ......++..
T Consensus       217 ~~-~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~----~~~~~~~~~~  290 (358)
T TIGR03451       217 AR-EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP----DMTLELPLLD  290 (358)
T ss_pred             HH-HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC----CceeeccHHH
Confidence            98 9999999998876 788888888876 89999999997 788999999999999999987432    1112344567


Q ss_pred             HhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          198 LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      ++.+++++.+++.....  ..+.++.+++++++|.+++  .++++|+++|+++|++.+.+++.. |+++.
T Consensus       291 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       291 VFGRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HhhcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            77888988887643221  2566888999999999975  577889999999999999988765 77664

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2.3e-35  Score=245.49  Aligned_cols=251  Identities=21%  Similarity=0.255  Sum_probs=209.7

Q ss_pred             cccceEEEEeccCCCC-CCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            4 ISGYGVAKVLDSENPE-FSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      -|++|+|+++|+++++ |++||+|+++    |+|+||+.++.+.++++ |++++.. ++++++..+.|||.++ ...++ 
T Consensus        66 ~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-  141 (324)
T cd08291          66 FEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-  141 (324)
T ss_pred             cceEEEEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-
Confidence            4678999999999996 9999999986    89999999999999999 8885544 4677888889998655 45555 


Q ss_pred             CCCEEEEe-cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337           79 HGECVFIS-AASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~-ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~  156 (269)
                      +++.++|+ +++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++.. ++.+.+++.+++ ++|++|||
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~  219 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDA  219 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEEC
Confidence            45556665 78899999999999999999999999999999999 8999999998876 888888888776 89999999


Q ss_pred             CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHCCCeee
Q 024337          157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~  235 (269)
                      +|+......+++++++|+++.+|.....    .....+...++.+++++.++....+. ....+.++.+++++. +.+++
T Consensus       220 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  294 (324)
T cd08291         220 VGGGLTGQILLAMPYGSTLYVYGYLSGK----LDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKT  294 (324)
T ss_pred             CCcHHHHHHHHhhCCCCEEEEEEecCCC----CcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccccc
Confidence            9998888889999999999999875421    11123345677889999888876542 223567888888888 99999


Q ss_pred             eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          236 VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      .+.++|+|+|+++|++.+.+++..||+++.
T Consensus       295 ~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         295 TFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             ceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            999999999999999999999989999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.7e-35  Score=247.17  Aligned_cols=251  Identities=20%  Similarity=0.239  Sum_probs=209.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++++.+++||+|++.                                                   |+|
T Consensus        69 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~  148 (378)
T PLN02827         69 HEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSF  148 (378)
T ss_pred             ccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccc
Confidence            47899999999999999999999853                                                   689


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+.++++.++++ |++++.. +++.+++++.++|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ .|++++
T Consensus       149 aeyv~v~~~~~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~  225 (378)
T PLN02827        149 SEYTVVHSGCAVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVD  225 (378)
T ss_pred             eeeEEechhheEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            99999999999999 9985543 477788888999988767788999999999986 9999999999999999 588888


Q ss_pred             CCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDK  188 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  188 (269)
                      +++++.++++ ++|+++++++.+. .++.+.+++.+++++|++|||+|. ..+..+++.++++ |+++.+|....     
T Consensus       226 ~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-----  299 (378)
T PLN02827        226 INPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-----  299 (378)
T ss_pred             CCHHHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-----
Confidence            8999999998 9999989987651 156677777776689999999997 5789999999998 99999987432     


Q ss_pred             CCCccc-hHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          189 PEGVHN-LMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       189 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      . .... ...++.+++++.|+....+.  ....++.+++++.+|++++  .++++|+|+++++|++.+.+++. +|+||+
T Consensus       300 ~-~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~  375 (378)
T PLN02827        300 K-PEVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIH  375 (378)
T ss_pred             C-ccccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEE
Confidence            1 1122 23567789999988765432  2446788999999999988  68889999999999999998876 699998


Q ss_pred             ec
Q 024337          266 VA  267 (269)
Q Consensus       266 ~~  267 (269)
                      +.
T Consensus       376 ~~  377 (378)
T PLN02827        376 MP  377 (378)
T ss_pred             ec
Confidence            74

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=6.3e-35  Score=245.52  Aligned_cols=243  Identities=17%  Similarity=0.228  Sum_probs=200.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK   45 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~   45 (269)
                      -|++|+|+++|++|+.+++||+|+.                                      .|+|+||++++.+.+++
T Consensus        72 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  151 (360)
T PLN02586         72 HEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLR  151 (360)
T ss_pred             cceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeee
Confidence            4678999999999999999999963                                      27899999999999999


Q ss_pred             cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHc
Q 024337           46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD-LLKNKF  124 (269)
Q Consensus        46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~-~~~~~~  124 (269)
                      + |++++.. ++|++++.+.|+|+++.....++++++|+|.|+ |++|++++|+||.+|++|++++.++++.. .++ ++
T Consensus       152 l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~  227 (360)
T PLN02586        152 F-PDNLPLD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RL  227 (360)
T ss_pred             C-CCCCCHH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hC
Confidence            9 9985554 578899999999999966666789999999886 99999999999999999998887766654 445 89


Q ss_pred             CCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcce
Q 024337          125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRL  203 (269)
Q Consensus       125 g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  203 (269)
                      |+++++++.+.    +.+++.++ ++|++||++|. ..+..++++++++|+++.+|....      ....++..++.++.
T Consensus       228 Ga~~vi~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~  296 (360)
T PLN02586        228 GADSFLVSTDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRK  296 (360)
T ss_pred             CCcEEEcCCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCe
Confidence            99988886653    23444443 69999999997 678999999999999999986421      12344556667777


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      .+.++....     .+.++++++++++|++++.+ ++|+|+|+++|++.+.+++..||+|+.+.
T Consensus       297 ~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  354 (360)
T PLN02586        297 LVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA  354 (360)
T ss_pred             EEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            777766543     45688999999999999876 47999999999999999998899999863

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-35  Score=244.80  Aligned_cols=240  Identities=18%  Similarity=0.213  Sum_probs=200.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-----------------------------------ccceeeEEEecCCceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-----------------------------------MTGWEEYSLITAPYLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~p   48 (269)
                      -|++|+|+++  +++.|++||+|+.                                   .|+|+||++++++.++++ |
T Consensus        65 hE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~-P  141 (343)
T PRK09880         65 HEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPY-P  141 (343)
T ss_pred             cccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEEC-C
Confidence            5788999999  7889999999973                                   278999999999999999 8


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      ++  ++++++++..++.++|+++.+ ....++++|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|++
T Consensus       142 ~~--l~~~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~  216 (343)
T PRK09880        142 EK--ADEKVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGAD  216 (343)
T ss_pred             CC--CCHHHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCc
Confidence            88  444566778889999999954 56678999999997 9999999999999999 7999999999999999 89999


Q ss_pred             eeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeee
Q 024337          128 EAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME  206 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (269)
                      +++|+++. ++.+.. +. .+++|++|||+|. ..+..++++++++|+++.+|....      ....++..++.+++++.
T Consensus       217 ~vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~  287 (343)
T PRK09880        217 KLVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLK  287 (343)
T ss_pred             EEecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEE
Confidence            99998775 544322 22 2369999999997 678999999999999999987431      22345667788999998


Q ss_pred             eeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          207 GFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ++...      .+.++.+++++.+|.+++  .++++|+|+|+++|++.+.+++..||+++.+
T Consensus       288 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        288 GSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             EEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            87642      346888999999999975  5678899999999999999888789999864

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=243.67  Aligned_cols=252  Identities=22%  Similarity=0.238  Sum_probs=203.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++++.|++||+|+++                              |+|+||+.++.+.++++ |++  +
T Consensus        59 ~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~--~  135 (347)
T PRK10309         59 HEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFAL-PTD--M  135 (347)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEEC-cCC--C
Confidence            47889999999999999999999862                              78999999999999999 888  4


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +++.|++..++.++|+++ +...++++++|+|+|+ |++|++++|+|+.+|++ |+++++++++.++++ ++|+++++++
T Consensus       136 s~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~  212 (347)
T PRK10309        136 PIEDGAFIEPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNS  212 (347)
T ss_pred             CHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecC
Confidence            444444444566788886 5678899999999986 99999999999999996 788988999999998 9999999988


Q ss_pred             CChhhHHHHHHHHCCC-Ccc-EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GID-VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      ++. + .+.+.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|.....   .......+..++.+++++.++.
T Consensus       213 ~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~~~~~~~~~~~~i~g~~  287 (347)
T PRK10309        213 REM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD---LHLTSATFGKILRKELTVIGSW  287 (347)
T ss_pred             ccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC---cccChhhhhHHhhcCcEEEEEe
Confidence            765 5 5556666665 898 99999997 6889999999999999999875320   0111112345778899999876


Q ss_pred             ecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .........+.++.+++++.+|.++  +.++++|+|+|+++|++.+.+++..||+|+.+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            6432112246788899999999885  56788899999999999999988889999976

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.9e-34  Score=244.59  Aligned_cols=250  Identities=18%  Similarity=0.224  Sum_probs=205.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------------------------------c
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------------------------------M   29 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------------------------------~   29 (269)
                      -|++|+|+++|++++.+++||+|++                                                      .
T Consensus        71 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  150 (381)
T PLN02740         71 HEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNT  150 (381)
T ss_pred             ccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccC
Confidence            4789999999999999999999974                                                      2


Q ss_pred             cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEE
Q 024337           30 TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVV  108 (269)
Q Consensus        30 g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~  108 (269)
                      |+|+||+.++.+.++++ |++++.. ++|.+++++.|||+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus       151 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi  227 (381)
T PLN02740        151 STFTEYTVLDSACVVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKII  227 (381)
T ss_pred             ccceeEEEEehHHeEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEE
Confidence            68999999999999999 8885544 477888999999999877789999999999997 9999999999999999 699


Q ss_pred             EEeCCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEecccccc
Q 024337          109 GSAGSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYN  185 (269)
Q Consensus       109 ~~~~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~  185 (269)
                      ++++++++.++++ ++|+++++|+.+. .++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|....  
T Consensus       228 ~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~--  304 (381)
T PLN02740        228 GVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT--  304 (381)
T ss_pred             EEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCC--
Confidence            9999999999998 9999989987753 136777877776589999999997 7889999999996 99999987532  


Q ss_pred             CCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEE
Q 024337          186 LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQV  263 (269)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv  263 (269)
                        .....+....+ .++.++.|+....+..  ...++.+++++.++.+++  .++++|+|+|+++|++.+.+++. .|++
T Consensus       305 --~~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~  378 (381)
T PLN02740        305 --PKMLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCL  378 (381)
T ss_pred             --CceecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEE
Confidence              11111222223 3678888877654322  356888999999998864  57789999999999999988875 4888


Q ss_pred             EE
Q 024337          264 VA  265 (269)
Q Consensus       264 v~  265 (269)
                      ++
T Consensus       379 ~~  380 (381)
T PLN02740        379 LH  380 (381)
T ss_pred             Ee
Confidence            86

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.8e-34  Score=242.35  Aligned_cols=243  Identities=18%  Similarity=0.218  Sum_probs=201.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK   45 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~   45 (269)
                      -|++|+|+++|++++.+++||+|+.                                      .|+|+||++++++.+++
T Consensus        66 hE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  145 (375)
T PLN02178         66 HEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLS  145 (375)
T ss_pred             ceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEE
Confidence            3678999999999999999999963                                      27899999999999999


Q ss_pred             cCCCCCCcchhhhhcCCcchhHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHH
Q 024337           46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNK  123 (269)
Q Consensus        46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~~  123 (269)
                      + |++++.. +++++++.+.|+|+++..... .+++++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++ +
T Consensus       146 l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~  221 (375)
T PLN02178        146 I-PDGLPSD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-R  221 (375)
T ss_pred             C-CCCCCHH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-h
Confidence            9 9985544 477889999999999855432 368999999987 999999999999999999999877554 67777 9


Q ss_pred             cCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcc
Q 024337          124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKR  202 (269)
Q Consensus       124 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  202 (269)
                      +|+++++++.+.    +.+.+.++ ++|++|||+|. ..+..++++++++|+++.+|....      ....+...++.++
T Consensus       222 lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~  290 (375)
T PLN02178        222 LGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGR  290 (375)
T ss_pred             CCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCC
Confidence            999988886642    24444443 69999999997 478999999999999999986421      1234556777889


Q ss_pred             eeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          203 LRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      +++.|+....     .+.+.++++++.+|++++.+ ++|+|+|+++|++.+.+++..||+|+.+.
T Consensus       291 ~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~  349 (375)
T PLN02178        291 KMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA  349 (375)
T ss_pred             eEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence            9998877644     45688899999999999877 46999999999999999998899999873

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=3.8e-34  Score=241.64  Aligned_cols=251  Identities=20%  Similarity=0.229  Sum_probs=202.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++++.+++||+|+..                                                   |+|
T Consensus        61 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~  140 (368)
T TIGR02818        61 HEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTF  140 (368)
T ss_pred             cccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccc
Confidence            57899999999999999999999752                                                   489


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+++|.++++++ |++++.. ++|++++++.+||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       141 aey~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~  217 (368)
T TIGR02818       141 SEYTVVPEISLAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID  217 (368)
T ss_pred             eeeEEechhheEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence            99999999999999 9885544 578888999999999877788999999999986 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDK  188 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  188 (269)
                      +++++.++++ ++|+++++|+.+. .++.+.+.+.+++++|++|||+|. ..+..++++++++ |+++.+|....    .
T Consensus       218 ~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~----~  292 (368)
T TIGR02818       218 INPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA----G  292 (368)
T ss_pred             CCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCC----C
Confidence            9999999998 9999989987641 146677777776689999999996 7789999999886 99999987431    0


Q ss_pred             CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .........++. +..+.++.....  ..+..+.++++++.+|.++  +.++++|+|+|+++|++.+.+++. .|+++.+
T Consensus       293 ~~~~~~~~~~~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       293 QEISTRPFQLVT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             CcccccHHHHhc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            111122233332 334556543321  1245688899999999875  457889999999999999988764 5988864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=8.2e-35  Score=239.74  Aligned_cols=258  Identities=26%  Similarity=0.369  Sum_probs=201.5

Q ss_pred             cccceEEEE---ec-cCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh-
Q 024337            4 ISGYGVAKV---LD-SENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC-   75 (269)
Q Consensus         4 i~~~G~v~~---vg-~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~-   75 (269)
                      .+|.|++..   +| ..+.....||.++..   |+|+||.++|...++++ |+++++. ++|++|.++.|||.+|...+ 
T Consensus        71 ~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~  148 (347)
T KOG1198|consen   71 RDGSGVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKI-PESLSFE-EAAALPLAALTALSALFQLAP  148 (347)
T ss_pred             cccCCceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhhccCC-CCccChh-hhhcCchHHHHHHHHHHhccc
Confidence            445555433   34 334456777777766   89999999999999999 9996655 68899999999999999988 


Q ss_pred             -----cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCC
Q 024337           76 -----SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        76 -----~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                           +++++++|||+||+|++|++++|+|+++|+ +|++++ +++++++++ ++|+++++||++. ++.+.+++.++++
T Consensus       149 ~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~  225 (347)
T KOG1198|consen  149 GKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKG  225 (347)
T ss_pred             cccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCC
Confidence                 899999999999999999999999999995 555555 999999999 9999999999998 9999999988459


Q ss_pred             ccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh---cceeeeeeeecc-cccchHHHHHHHH
Q 024337          150 IDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS---KRLRMEGFIVLD-HYHLYPKFLEMII  225 (269)
Q Consensus       150 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~  225 (269)
                      ||+||||+|+........++..+|+...++............ ..+..+..   ....+.+..... .....++.++.+.
T Consensus       226 ~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  304 (347)
T KOG1198|consen  226 VDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALV  304 (347)
T ss_pred             ccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc-cchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHH
Confidence            999999999988888899999888765555544321111111 11110111   111111111111 1345578899999


Q ss_pred             HHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          226 PHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       226 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      ++++++++++.+.+.||++++.+|++.+.+++..||++++++
T Consensus       305 ~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  305 ELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            999999999999999999999999999999999999999876

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=5.7e-34  Score=236.99  Aligned_cols=236  Identities=17%  Similarity=0.115  Sum_probs=199.0

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDV   51 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~   51 (269)
                      ..|++|+|+++|++++++++||+|+.                               .|+|+||+.++.++++++ |+++
T Consensus        61 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~~  139 (329)
T TIGR02822        61 GHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRL-PTGY  139 (329)
T ss_pred             CcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEEC-CCCC
Confidence            35789999999999999999999963                               278999999999999999 8885


Q ss_pred             CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      +.. +++++++++.|||+++. .++++++++|+|+|+ |++|++++|+|+.+|++|+++++++++.++++ ++|+++++|
T Consensus       140 ~~~-~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~  215 (329)
T TIGR02822       140 DDV-ELAPLLCAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGG  215 (329)
T ss_pred             CHH-HhHHHhccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecc
Confidence            544 57889999999999994 578999999999998 99999999999999999999999999999999 999999887


Q ss_pred             cCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          132 YKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      ..+. .         .+++|+++++.+. ..+..++++++++|+++.+|....     .....++..++.+++++.++..
T Consensus       216 ~~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~  280 (329)
T TIGR02822       216 AYDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT-----DTPPLNYQRHLFYERQIRSVTS  280 (329)
T ss_pred             cccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc-----cCCCCCHHHHhhCCcEEEEeec
Confidence            5431 1         1268999998875 788999999999999999987422     1123445566778888888764


Q ss_pred             cccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      ..     ++.+.++++++++|++++ ++++|+|+|+++|++.+.+++..||+|+
T Consensus       281 ~~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       281 NT-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             CC-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            33     456788899999999975 5678999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=7.8e-34  Score=240.19  Aligned_cols=249  Identities=19%  Similarity=0.249  Sum_probs=204.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------------------------------------cc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------------------TG   31 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~   31 (269)
                      .|++|+|+++|++++++++||+|+.+                                                    |+
T Consensus        62 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~  141 (369)
T cd08301          62 HEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTST  141 (369)
T ss_pred             cccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeecccc
Confidence            57899999999999999999999853                                                    57


Q ss_pred             eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337           32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS  110 (269)
Q Consensus        32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~  110 (269)
                      |+||+.++..+++++ |++++.. +++.+++++.++|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|+++
T Consensus       142 ~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~  218 (369)
T cd08301         142 FSEYTVVHVGCVAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGV  218 (369)
T ss_pred             ceeEEEEecccEEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999999999 8885543 577888899999999877789999999999986 9999999999999999 89999


Q ss_pred             eCCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337          111 AGSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD  187 (269)
Q Consensus       111 ~~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  187 (269)
                      ++++++.++++ ++|++.++++... .++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|.....   
T Consensus       219 ~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~---  294 (369)
T cd08301         219 DLNPSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD---  294 (369)
T ss_pred             cCCHHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC---
Confidence            99999999998 9999888887651 156677777776689999999997 6788899999996 999999875421   


Q ss_pred             CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                       .........++ +++++.++...++.  .+..++.+++++.++.+++  .++++|+|+|+++|++.+.+++.. |+++
T Consensus       295 -~~~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         295 -AVFSTHPMNLL-NGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             -cccccCHHHHh-cCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence             11122333343 68889888765432  2456888999999998764  467889999999999999998864 8776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=7.6e-34  Score=240.02  Aligned_cols=250  Identities=23%  Similarity=0.293  Sum_probs=202.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      .|++|+|+++|+++++|++||+|++.                                                   |+|
T Consensus        62 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~  141 (368)
T cd08300          62 HEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTF  141 (368)
T ss_pred             cceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccc
Confidence            57899999999999999999999753                                                   479


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+.++.+.++++ |++++.. +++.+++++.++|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|++++
T Consensus       142 aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~  218 (368)
T cd08300         142 SEYTVVAEISVAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGID  218 (368)
T ss_pred             eeEEEEchhceEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            99999999999999 9885544 577888899999999877788999999999986 9999999999999999 799999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCChh-hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDK  188 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  188 (269)
                      +++++.++++ ++|+++++|+++.+ ++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|....    .
T Consensus       219 ~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~----~  293 (368)
T cd08300         219 INPDKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAA----G  293 (368)
T ss_pred             CCHHHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCC----C
Confidence            9999999998 99999999887531 47777877776689999999997 6889999999886 99999987431    0


Q ss_pred             CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      .........+. .+..+.++....+.  ..+.+..+++++.+|++++  .++++|+|+|+++|++.+.+++. .|++++
T Consensus       294 ~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         294 QEISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             CccccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            11112222233 23455555544332  2566888999999998875  47789999999999999988765 588764

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=8.3e-34  Score=236.13  Aligned_cols=252  Identities=19%  Similarity=0.227  Sum_probs=214.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .|++|+|+++|++++.+++||+|+++   |+|++|+.++...++++ |++++.. +++.++..+.++|+++ ..++++++
T Consensus        64 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g  140 (324)
T cd08292          64 SEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPL-PDGISDE-VAAQLIAMPLSALMLL-DFLGVKPG  140 (324)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEEC-CCCCCHH-HhhhccccHHHHHHHH-HhhCCCCC
Confidence            47889999999999999999999985   79999999999999999 9885443 4778888899999998 55889999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++|+|+|++|++|++++|+|+++|++++++++++++.+.++ ++|+++++++++. ++.+.+.+.+++ ++|++|||+|+
T Consensus       141 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~  218 (324)
T cd08292         141 QWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGG  218 (324)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCC
Confidence            99999999999999999999999999999999999999998 7899888888876 788888888877 99999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      .....++++++++|+++.+|....     ......+...+.+++++.++....+     +....+.+..+++++.+|.+.
T Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~  293 (324)
T cd08292         219 KLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLL  293 (324)
T ss_pred             hhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            888899999999999999986421     1122344456678999988876543     223456788999999999998


Q ss_pred             eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      +.+.+.|+++++.+|++.+.++...+|++++
T Consensus       294 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         294 LPVEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             CccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            7667789999999999999988778898863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=5.3e-34  Score=219.34  Aligned_cols=255  Identities=23%  Similarity=0.293  Sum_probs=209.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      =||.|.|+.+|++++.|++||+|+..    |+|++|.+.+++.++++ ++.+++. .||++....+|||.+|.+.-++++
T Consensus        83 nEGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~  160 (354)
T KOG0025|consen   83 NEGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNK  160 (354)
T ss_pred             CcceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCC
Confidence            47889999999999999999999876    89999999999999999 8887776 699999999999999988899999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCC-CccEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFE  155 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid  155 (269)
                      ||+|+..||++++|.+++|+|+++|.+-+-+.|+..+++.+++   .+|++++|...+. .-.+..+..... ++.+.||
T Consensus       161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~~~~~k~~~~~~~prLalN  239 (354)
T KOG0025|consen  161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RDRKMKKFKGDNPRPRLALN  239 (354)
T ss_pred             CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cchhhhhhhccCCCceEEEe
Confidence            9999999999999999999999999999999988776655433   7899999864432 111112222233 7899999


Q ss_pred             CCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc------ccchHHHHHHHHHHHH
Q 024337          156 NVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH------YHLYPKFLEMIIPHIK  229 (269)
Q Consensus       156 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  229 (269)
                      |+|+.......+.|..+|.++.+|..+.     .........++++++++.|+++..|      ++...+.+.++.+++.
T Consensus       240 cVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~  314 (354)
T KOG0025|consen  240 CVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYR  314 (354)
T ss_pred             ccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHH
Confidence            9999998999999999999999998764     2333445678899999999999887      3344567899999999


Q ss_pred             CCCeeeeeehccccccHHHHHHHHhcCC-CcceEEEEe
Q 024337          230 EGKLVYVEDMAEGLESAPAALIGLFSGQ-NVGKQVVAV  266 (269)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  266 (269)
                      .|++..+.....+|++...|++...+.. ..||-++.+
T Consensus       315 ~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  315 RGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             cCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            9999988888889999999988665543 335655554

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.2e-33  Score=237.27  Aligned_cols=246  Identities=19%  Similarity=0.231  Sum_probs=204.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCC----
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHT----   49 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~----   49 (269)
                      -|++|+|+++|++++.+ +||+|+.                              .|+|+||+.++.+.++++ |+    
T Consensus        59 hE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~i-p~~~~~  136 (349)
T TIGR03201        59 HEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVV-DEARLA  136 (349)
T ss_pred             ccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEEC-Cccccc
Confidence            47899999999999887 9999975                              279999999999999999 76    


Q ss_pred             --CCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc
Q 024337           50 --DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        50 --~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                        +++.. .++++++++.++|+++. ..+++++++|+|+|+ |++|++++|+|+.+|++|+++++++++.++++ ++|++
T Consensus       137 ~~~~~~~-~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~  212 (349)
T TIGR03201       137 AAGLPLE-HVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGAD  212 (349)
T ss_pred             ccCCCHH-HhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCc
Confidence              64433 47788899999999995 478999999999999 99999999999999999999999999999998 89999


Q ss_pred             eeEecCCh--hhHHHHHHHHCCC-Ccc----EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHh
Q 024337          128 EAFNYKEE--ADLNAALKRYFPE-GID----VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLV  199 (269)
Q Consensus       128 ~~~~~~~~--~~~~~~i~~~~~~-~~d----~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  199 (269)
                      +++++.+.  .++.+.+++.+++ ++|    ++|||+|+ ..+..++++++++|+++.+|....      ....++..++
T Consensus       213 ~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~  286 (349)
T TIGR03201       213 LTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNLM  286 (349)
T ss_pred             eEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHHh
Confidence            88887653  1466677777776 776    89999997 667789999999999999987532      1234455667


Q ss_pred             hcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee-eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          200 SKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV-EDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .++.++.+++...     .+.++.+++++++|.+++. +.+.|+|+++++||+.+.+++..||+++++
T Consensus       287 ~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       287 AFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             hcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence            7778888776433     4568899999999998752 224689999999999999999889998853

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.5e-34  Score=220.86  Aligned_cols=250  Identities=21%  Similarity=0.257  Sum_probs=212.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------------------------------------cc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------------------TG   31 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~   31 (269)
                      =|++|+|+.+|.+|..+++||+|..+                                                    .+
T Consensus        67 HEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~St  146 (375)
T KOG0022|consen   67 HEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTST  146 (375)
T ss_pred             ccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEeccccc
Confidence            37899999999999999999999755                                                    37


Q ss_pred             eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337           32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS  110 (269)
Q Consensus        32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~  110 (269)
                      |+||.+++...+.++ +...|++ .++.|.|...|+|.+..+.+++++|++++|+|- |++|++++|-||..|+ ++|++
T Consensus       147 FsEYTVv~~~~v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgv  223 (375)
T KOG0022|consen  147 FSEYTVVDDISVAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGV  223 (375)
T ss_pred             ceeEEEeecceeEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEE
Confidence            999999999999999 5554555 588899999999999989999999999999998 9999999999999999 99999


Q ss_pred             eCCHHHHHHHHHHcCCceeEecCChh-hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337          111 AGSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD  187 (269)
Q Consensus       111 ~~s~~~~~~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  187 (269)
                      +-++++++.++ +||+.+.+|..+.. ...+.++++|++++|+-|||+|+ ..+.+++.....+ |+-+.+|....    
T Consensus       224 DiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----  298 (375)
T KOG0022|consen  224 DINPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----  298 (375)
T ss_pred             ecCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----
Confidence            99999999999 99999999877421 47888999999999999999998 8999999999997 99999987543    


Q ss_pred             CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      .......+..++ .+.++.|+..+.+..  ++++..+.+...++++.  ..+++.+||+++++||+.|.+|+.. |.|+.
T Consensus       299 ~~~i~~~p~~l~-~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  299 GQEISTRPFQLV-TGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             Ccccccchhhhc-cccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            222233344444 467777777766533  67788898888888765  4577888999999999999999987 66654

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.8e-33  Score=236.60  Aligned_cols=245  Identities=20%  Similarity=0.194  Sum_probs=203.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK   45 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~   45 (269)
                      -|++|+|+++|++++.|++||+|+.                                      .|+|+||++++.+.+++
T Consensus        69 ~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  148 (357)
T PLN02514         69 HEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVK  148 (357)
T ss_pred             ceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEE
Confidence            4788999999999999999999962                                      27899999999999999


Q ss_pred             cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337           46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG  125 (269)
Q Consensus        46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g  125 (269)
                      + |++++.. +++++++.+.|||+++......+++++++|+|+ |++|++++|+||.+|++|+++++++++...+.+++|
T Consensus       149 i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~G  225 (357)
T PLN02514        149 I-PEGMAPE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLG  225 (357)
T ss_pred             C-CCCCCHH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcC
Confidence            9 9885544 578899999999999966666789999999975 999999999999999999999988887766654799


Q ss_pred             CceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337          126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR  204 (269)
Q Consensus       126 ~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  204 (269)
                      ++.++++.+.    +.+.+.+. ++|++|||+|. ..+..++++++++|+++.+|....      .....+..++.++.+
T Consensus       226 a~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~  294 (357)
T PLN02514        226 ADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKV  294 (357)
T ss_pred             CcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcE
Confidence            9877765442    23444333 69999999996 688999999999999999987532      123455667788999


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +.++....     ...++++++++.+|.+++.+ ++|+|+|+++|++.+.+++..||+++.++.
T Consensus       295 i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        295 ITGSFIGS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             EEEEecCC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            99887654     45688899999999998766 479999999999999999988999998864

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=4e-33  Score=234.46  Aligned_cols=243  Identities=23%  Similarity=0.261  Sum_probs=207.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .|++|+|+++|++++.+++||+|++                               .|+|+||+.++.+.++++ |+++ 
T Consensus        70 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l-P~~~-  147 (351)
T cd08233          70 HEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKL-PDNV-  147 (351)
T ss_pred             ccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEEC-cCCC-
Confidence            4788999999999999999999985                               378999999999999999 8884 


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                       +++.+++..++.+||+++ ..++++++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|++.+++
T Consensus       148 -~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~  223 (351)
T cd08233         148 -PLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLD  223 (351)
T ss_pred             -CHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEC
Confidence             444444557888999999 6788999999999986 9999999999999999 8999999999999998 899999999


Q ss_pred             cCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          132 YKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      +++. ++.+.+++.+++ ++|++|||+|. ..+..++++++++|+++.+|....      ....++..++.+++++.+..
T Consensus       224 ~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~  296 (351)
T cd08233         224 PTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSI  296 (351)
T ss_pred             CCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEe
Confidence            8887 888888888776 79999999996 788999999999999999987431      22345667778899998876


Q ss_pred             ecccccchHHHHHHHHHHHHCCCee--eeeehccccccH-HHHHHHHhcCCCc-ceEEE
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESA-PAALIGLFSGQNV-GKQVV  264 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkvvv  264 (269)
                      ...     .+.++++++++++|.++  +.+.++|+++|+ ++|++.+.+++.. +|+||
T Consensus       297 ~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         297 CYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             ccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            543     46789999999999995  446778999996 7999999998864 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=5.6e-33  Score=234.48  Aligned_cols=248  Identities=20%  Similarity=0.263  Sum_probs=202.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--------------------------------------------------ccee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--------------------------------------------------TGWE   33 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------g~~~   33 (269)
                      -|++|+|+++|++++++++||+|++.                                                  |+|+
T Consensus        61 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a  140 (365)
T cd08277          61 HEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFS  140 (365)
T ss_pred             cceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccce
Confidence            47899999999999999999999763                                                  6899


Q ss_pred             eEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeC
Q 024337           34 EYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG  112 (269)
Q Consensus        34 ~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~  112 (269)
                      ||+.++.++++++ |++++.. +++++++++.+||+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|+++++
T Consensus       141 e~~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~  217 (365)
T cd08277         141 QYTVVDENYVAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDI  217 (365)
T ss_pred             eeEEEchhheEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence            9999999999999 9885544 577888999999999877788999999999986 9999999999999999 7999999


Q ss_pred             CHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCCC
Q 024337          113 SKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDKP  189 (269)
Q Consensus       113 s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~  189 (269)
                      ++++.++++ ++|++++++..+. .++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|...+.     
T Consensus       218 ~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----  291 (365)
T cd08277         218 NEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----  291 (365)
T ss_pred             CHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----
Confidence            999999998 9999888887652 134666777666689999999996 7788999999885 999999875321     


Q ss_pred             CCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      .....+..++. +.++.++....+.  ....+..+++++.++.++  +.++++|+|+|+++|++.+.+++ ..|+++
T Consensus       292 ~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i  364 (365)
T cd08277         292 ELSIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI  364 (365)
T ss_pred             ccccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence            11223334443 7788887765432  234678899999988655  56778899999999999998877 458776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1.7e-32  Score=234.63  Aligned_cols=250  Identities=17%  Similarity=0.127  Sum_probs=197.9

Q ss_pred             cccceEEEEeccCCC-CCCCCCeEEec-------------------cceeeEEEecCC----ceeecCCCCCCcchhhhh
Q 024337            4 ISGYGVAKVLDSENP-EFSKGDLVWGM-------------------TGWEEYSLITAP----YLFKIQHTDVPLSYYTGI   59 (269)
Q Consensus         4 i~~~G~v~~vg~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~~~~~p~~~~~~~~~a~   59 (269)
                      -|++|+|+++|++|+ .|++||+|+..                   |+|+||++++.+    .++++ |++  ++++.|+
T Consensus        68 hE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~l-P~~--l~~~~aa  144 (410)
T cd08238          68 HEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLI-YEG--DGYAEAS  144 (410)
T ss_pred             cccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEEC-CCC--CCHHHHh
Confidence            467899999999998 59999999762                   899999999997    58999 888  4444444


Q ss_pred             cCCcchh---HHHHH--------HHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHc-
Q 024337           60 LGMPGMT---AYVGF--------YEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKVDLLKNKF-  124 (269)
Q Consensus        60 l~~~~~~---a~~~l--------~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~---~V~~~~~s~~~~~~~~~~~-  124 (269)
                      +..++.+   ++.++        .+.++++++++|+|+|++|++|++++|+|+.+|+   +|++++++++++++++ ++ 
T Consensus       145 l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~  223 (410)
T cd08238         145 LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLF  223 (410)
T ss_pred             hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhc
Confidence            4433322   33332        2346789999999999889999999999999864   8999999999999998 76 


Q ss_pred             -------CCc-eeEecCC-hhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCcc
Q 024337          125 -------GFD-EAFNYKE-EADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH  193 (269)
Q Consensus       125 -------g~~-~~~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  193 (269)
                             |++ .++++.+ . ++.+.+++.+++ ++|++||++|. ..+..++++++++|+++.++.....   .....+
T Consensus       224 ~~~~~~~Ga~~~~i~~~~~~-~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~  299 (410)
T cd08238         224 PPEAASRGIELLYVNPATID-DLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPL  299 (410)
T ss_pred             cccccccCceEEEECCCccc-cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---Cccccc
Confidence                   665 4677654 3 677788888877 89999999985 8889999999999988876542110   111235


Q ss_pred             chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      ++..++.+++++.|+....     .+.++.+++++.+|++++  .++++|+|+++++|++.+. ++..||+|+.++
T Consensus       300 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         300 NFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             cHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            5667888999999876543     567889999999999987  5788999999999999999 777899999874

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.8e-32  Score=231.38  Aligned_cols=248  Identities=21%  Similarity=0.228  Sum_probs=200.4

Q ss_pred             cccceEEEEeccCCCC------CCCCCeEEec-------------------------------------cceeeEEEecC
Q 024337            4 ISGYGVAKVLDSENPE------FSKGDLVWGM-------------------------------------TGWEEYSLITA   40 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~   40 (269)
                      .|++|+|+++|++++.      +++||+|+.+                                     |+|+||+.+++
T Consensus        60 ~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  139 (361)
T cd08231          60 HEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPP  139 (361)
T ss_pred             cCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecC
Confidence            4788999999999986      9999999764                                     78999999999


Q ss_pred             C-ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 024337           41 P-YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVD  118 (269)
Q Consensus        41 ~-~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~  118 (269)
                      + .++++ |++++.. .++++++++.|||+++.....++++++|||+|+ |++|++++++|+.+|+ +|+++++++++.+
T Consensus       140 ~~~~~~l-P~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         140 GTAIVRV-PDNVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCceEEC-CCCCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            7 79999 8884333 466777999999999977666779999999985 9999999999999999 9999999999999


Q ss_pred             HHHHHcCCceeEecCChhhH---HHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCcc
Q 024337          119 LLKNKFGFDEAFNYKEEADL---NAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH  193 (269)
Q Consensus       119 ~~~~~~g~~~~~~~~~~~~~---~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  193 (269)
                      +++ ++|++.+++++.. ++   ...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|....    ......
T Consensus       217 ~~~-~~g~~~vi~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~  290 (361)
T cd08231         217 LAR-EFGADATIDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAP----AGTVPL  290 (361)
T ss_pred             HHH-HcCCCeEEcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCC----CCcccc
Confidence            998 9999888887653 32   2467777766 89999999986 678899999999999999986431    111223


Q ss_pred             chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCC----CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG----KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .+..++.+++++.++...+     .+.++++++++.++    .+.+.+.++|+++++++|++.+.++.. +|++|.+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         291 DPERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             CHHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            4445688899988876543     34567777777776    344566788999999999999988774 7998863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=6e-32  Score=224.93  Aligned_cols=253  Identities=23%  Similarity=0.270  Sum_probs=214.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      .+++|+|+++|++++.+++||+|+++     |+|++|+.++.++++++ |++++.. +++++++.+.+||. +...++++
T Consensus        65 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~a~~~~~~~~ta~~-~~~~~~~~  141 (324)
T cd08244          65 GEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV-PDGLDLE-AAVAVVHDGRTALG-LLDLATLT  141 (324)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeC-CCCCCHH-HHhhhcchHHHHHH-HHHhcCCC
Confidence            46789999999999999999999984     79999999999999999 8885544 57789999999964 44678899


Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~  157 (269)
                      ++++++|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++.++++.+. ++.+.+.+.+++ ++|+++||+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~  219 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGV  219 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECC
Confidence            9999999999999999999999999999999999999999997 8999888888876 777888777776 899999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeee
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYV  236 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~  236 (269)
                      |+.....++++++++|+++.+|.....     ....+...++.+++++.+...... +....+.+..+++++.++.+.+.
T Consensus       220 g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~  294 (324)
T cd08244         220 GGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV  294 (324)
T ss_pred             ChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc
Confidence            997789999999999999999874321     112333456788888888776543 22345678889999999999877


Q ss_pred             eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          237 EDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +...+++++++++++.+.+++..||+++++
T Consensus       295 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         295 VGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             cceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            777899999999999999998899999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=4.2e-32  Score=231.48  Aligned_cols=249  Identities=19%  Similarity=0.259  Sum_probs=207.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .|++|+|+++|++++.+++||+|+++                               |+|++|+.++...++++ |++++
T Consensus        87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~i-P~~l~  165 (393)
T cd08246          87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPK-PKHLS  165 (393)
T ss_pred             cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEEC-CCCCC
Confidence            46789999999999999999999764                               78999999999999999 98854


Q ss_pred             cchhhhhcCCcchhHHHHHHHh--hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE
Q 024337           53 LSYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF  130 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~  130 (269)
                      .. +++.+++++.+||+++...  ++++++++|+|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++.++
T Consensus       166 ~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~i  243 (393)
T cd08246         166 WE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGVI  243 (393)
T ss_pred             HH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEEE
Confidence            43 4778999999999998655  67899999999999999999999999999999999999999999998 89998888


Q ss_pred             ecCCh---------------------hhHHHHHHHHCCC--CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCC
Q 024337          131 NYKEE---------------------ADLNAALKRYFPE--GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLD  187 (269)
Q Consensus       131 ~~~~~---------------------~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  187 (269)
                      +.++.                     ..+.+.+.+.+++  ++|++|||+|+..+..++++++++|+++.+|.....   
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~---  320 (393)
T cd08246         244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY---  320 (393)
T ss_pred             cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC---
Confidence            76431                     0245667777665  699999999988889999999999999999864321   


Q ss_pred             CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcC-CCcceEEEE
Q 024337          188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSG-QNVGKQVVA  265 (269)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~  265 (269)
                        ....+...++.++.++.+.+...     .+.+..++++++++.+.+.+.++|++++++++++.+.++ +..||+++-
T Consensus       321 --~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         321 --NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             --CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence              12234455667777777765543     356788999999999987777889999999999999988 788999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=7.7e-32  Score=224.21  Aligned_cols=253  Identities=22%  Similarity=0.296  Sum_probs=215.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .+++|+|.++|++++.+++||+|+++   |+|++|+.++.+.++++ |++++.. +++.++..+.+||+++...+.+.++
T Consensus        62 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~  139 (323)
T cd05282          62 NEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPG  139 (323)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEEecCHHHeEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCC
Confidence            36889999999999999999999985   79999999999999999 8885443 5778889999999999887888999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|+++++++.+. ++.+.+.+.+++ ++|+++||+|+
T Consensus       140 ~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~  217 (323)
T cd05282         140 DWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGG  217 (323)
T ss_pred             CEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCC
Confidence            99999999999999999999999999999999999999998 8999999988876 777888888776 89999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      ......+++++++|+++.+|.....     ....+...+..+++++.+.....+     +....+.+..+++++.++.+.
T Consensus       218 ~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  292 (323)
T cd05282         218 ESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT  292 (323)
T ss_pred             HHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc
Confidence            7778889999999999999874321     122333444458888888776543     234456788899999999998


Q ss_pred             eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      +.+.+.+++++++++++.+.+++..+|++++
T Consensus       293 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         293 TPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             cCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            7777889999999999999988888898863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.1e-32  Score=226.23  Aligned_cols=245  Identities=22%  Similarity=0.260  Sum_probs=205.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------cceeeEEEecCCceeecCCCCCCcchhhhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILG   61 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~   61 (269)
                      -|++|+|+++|++++.+++||+|++.                      |+|++|+.++.+.++++ |++++.. ++++++
T Consensus        83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~a~l~  160 (350)
T cd08274          83 ADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPV-NSPLSDV-ELATFP  160 (350)
T ss_pred             CcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeC-CCCCCHH-HHHhcc
Confidence            46789999999999999999999872                      78999999999999999 8885543 578999


Q ss_pred             CcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHH
Q 024337           62 MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA  141 (269)
Q Consensus        62 ~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~  141 (269)
                      +++.+||+++ ...+++++++++|+|++|++|++++++|+++|++|+++++++ +.+.++ ++|++.+++.... ...+ 
T Consensus       161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~-  235 (350)
T cd08274         161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD-  235 (350)
T ss_pred             cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH-
Confidence            9999999998 678899999999999999999999999999999999998665 888887 8998766665443 3333 


Q ss_pred             HHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHH
Q 024337          142 LKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF  220 (269)
Q Consensus       142 i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (269)
                       ...+.+ ++|++|||+|+..+..++++++++|+++.+|....     .....+...++.+++++.++....     .+.
T Consensus       236 -~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  304 (350)
T cd08274         236 -AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----REV  304 (350)
T ss_pred             -HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HHH
Confidence             344444 89999999999889999999999999999986421     112345566678888888877533     567


Q ss_pred             HHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          221 LEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +..+++++.++.+++.+...+++++++++++.+.+++..+|+++.+
T Consensus       305 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         305 FRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            8899999999999877778899999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-31  Score=223.61  Aligned_cols=242  Identities=22%  Similarity=0.262  Sum_probs=206.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .|++|+|+++|++++.+++||+|++                               .|+|+||+.++.+.++++ |++++
T Consensus        60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~l-p~~~~  138 (333)
T cd08296          60 HEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARI-PDDLD  138 (333)
T ss_pred             cceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeC-CCCCC
Confidence            4788999999999999999999975                               278999999999999999 98854


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .. +++++++++.++|+++.. .+++++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++
T Consensus       139 ~~-~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~  214 (333)
T cd08296         139 AA-EAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDT  214 (333)
T ss_pred             HH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecC
Confidence            43 477899999999999955 4899999999999 699999999999999999999999999999998 9999989998


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCC-chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      .+. ++.+.+.+.  .++|+++|+.| ...+..++++++++|+++.+|....      ........++.+++++.+....
T Consensus       215 ~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~  285 (333)
T cd08296         215 SKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSG  285 (333)
T ss_pred             CCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcC
Confidence            876 676666655  36999999997 4788999999999999999987531      2234455677899999987643


Q ss_pred             ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      .     .+.+..+++++.++.+++.+ ..++++++.+|++.+.+++..||+|++
T Consensus       286 ~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         286 T-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             C-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            3     45678888889999888765 479999999999999999999999873

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=223.61  Aligned_cols=257  Identities=23%  Similarity=0.335  Sum_probs=213.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .+++|+|.++|++++.+++||+|+++   |+|++|+.++.++++++ |++++.. +++.++.++.+||+++...+.++++
T Consensus        64 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~  141 (334)
T PTZ00354         64 LEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKG  141 (334)
T ss_pred             eeeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            46789999999999999999999997   79999999999999999 9885443 4778899999999999777889999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhh-HHHHHHHHCCC-CccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD-LNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      ++|+|+|++|++|++++++|+.+|++++.+.+++++.++++ ++|++.+++.... + +.+.+.+.+++ ++|+++||.|
T Consensus       142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~  219 (334)
T PTZ00354        142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVG  219 (334)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCc
Confidence            99999999999999999999999999888999999999998 8999888887764 4 77778887766 8999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCe
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~  233 (269)
                      +..+..++++++++|+++.++...+.    .....+...++.++.++.++.....     +....+.++.+++++.++.+
T Consensus       220 ~~~~~~~~~~l~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  295 (334)
T PTZ00354        220 GSYLSETAEVLAVDGKWIVYGFMGGA----KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEI  295 (334)
T ss_pred             hHHHHHHHHHhccCCeEEEEecCCCC----cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCc
Confidence            88899999999999999998864321    1111444555666667777654331     11223556788899999998


Q ss_pred             eeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      .+.+...+++++++++++.+.+++..+|+++++.+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        296 KPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             cCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            87777789999999999999988888999998765

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=9.6e-32  Score=225.31  Aligned_cols=255  Identities=25%  Similarity=0.279  Sum_probs=211.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      .|++|+|+++|++++.+++||+|++.    |+|++|+.++.+.++++ |++++.. +++++++.+.++|+++.....+++
T Consensus        69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~  146 (341)
T cd08290          69 NEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQP  146 (341)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCC
Confidence            47899999999999999999999986    89999999999999999 8885443 578889999999999977788999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHcCCceeEecCCh--hhHHHHHHHHCCCCccEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKVDLLKNKFGFDEAFNYKEE--ADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----~~~~~~~~~~g~~~~~~~~~~--~~~~~~i~~~~~~~~d~v  153 (269)
                      +++|+|+|++|++|++++|+|++.|++|+++++++    ++.+.++ ++|++++++++..  .++.+.+....++++|++
T Consensus       147 g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~v  225 (341)
T cd08290         147 GDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLA  225 (341)
T ss_pred             CCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEE
Confidence            99999999999999999999999999999999776    6688887 8999998887651  035566666654479999


Q ss_pred             EeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHH
Q 024337          154 FENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHI  228 (269)
Q Consensus       154 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  228 (269)
                      |||+|+..+...+++++++|+++.++....     .........++.+++++.+.....+     +....+.+..+++++
T Consensus       226 ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (341)
T cd08290         226 LNCVGGKSATELARLLSPGGTMVTYGGMSG-----QPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELI  300 (341)
T ss_pred             EECcCcHhHHHHHHHhCCCCEEEEEeccCC-----CCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHH
Confidence            999999778889999999999999986432     1122334456788999988876442     223345688899999


Q ss_pred             HCCCeeeeeehcc---ccccHHHHHHHHhcCCCcceEEEEe
Q 024337          229 KEGKLVYVEDMAE---GLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       229 ~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .++.+.+.....+   ++++++++++.+.+++..+|+|+.+
T Consensus       301 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         301 REGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            9999987666667   9999999999999988889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-31  Score=223.23  Aligned_cols=248  Identities=17%  Similarity=0.246  Sum_probs=201.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      .|++|+|+++|++++.+++||+|+++      |+|++|+.++.+.++++ |++++.. +++++++++.+||+++...+++
T Consensus        64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~  141 (336)
T TIGR02817        64 WDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGI  141 (336)
T ss_pred             eeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCC
Confidence            47889999999999999999999985      78999999999999999 9885543 5788999999999999887888


Q ss_pred             CC-----CCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           78 KH-----GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        78 ~~-----~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ++     +++|+|+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++..  ++.+.+.+..++++|
T Consensus       142 ~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd  218 (336)
T TIGR02817       142 NDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVS  218 (336)
T ss_pred             CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCC
Confidence            87     999999999999999999999998 999999999999999998 899998988654  666777765444899


Q ss_pred             EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc---c--ccch--HHHHHH
Q 024337          152 VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD---H--YHLY--PKFLEM  223 (269)
Q Consensus       152 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~--~~~~~~  223 (269)
                      +++|++++ ..+...+++++++|+++.++..         ...+...+..+++++.+.....   +  +...  .+.+++
T Consensus       219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (336)
T TIGR02817       219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP---------AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNR  289 (336)
T ss_pred             EEEEcCCcHHHHHHHHHHhccCCEEEEEccc---------ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHH
Confidence            99999864 7889999999999999987431         1122333445556665543321   1  1111  256888


Q ss_pred             HHHHHHCCCeeeeeehccc---cccHHHHHHHHhcCCCcceEEEE
Q 024337          224 IIPHIKEGKLVYVEDMAEG---LESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       224 ~~~~~~~g~~~~~~~~~~~---~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      +++++.++.+++.+.+.++   ++++++|++.+.+++..||+++.
T Consensus       290 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       290 VARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            9999999999876665554   68999999999999888998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=7.4e-32  Score=227.00  Aligned_cols=240  Identities=20%  Similarity=0.198  Sum_probs=188.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------cceeeEEEecCCceeecCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------TGWEEYSLITAPYLFKIQHTD   50 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~~~~~p~~   50 (269)
                      -|++|+|+++|++ +.|++||+|++.                                 |+|+||++++.+.++++ |++
T Consensus        63 ~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~-P~~  140 (355)
T cd08230          63 HEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKV-PPS  140 (355)
T ss_pred             cccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEEC-CCC
Confidence            5789999999999 999999999742                                 67999999999999999 888


Q ss_pred             CCcchhhhhcCCcchhHHHHHHHh------hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHH
Q 024337           51 VPLSYYTGILGMPGMTAYVGFYEV------CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLK  121 (269)
Q Consensus        51 ~~~~~~~a~l~~~~~~a~~~l~~~------~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~  121 (269)
                        ++ +++++..++.+++.++...      .+++++++|+|+|+ |++|++++|+||++|++|+++++   ++++.++++
T Consensus       141 --~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~  216 (355)
T cd08230         141 --LA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE  216 (355)
T ss_pred             --CC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence              44 5667777777766665332      23578999999997 99999999999999999999997   678999998


Q ss_pred             HHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc----hH
Q 024337          122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN----LM  196 (269)
Q Consensus       122 ~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~  196 (269)
                       ++|++. +++.+. ++.+ .+  ..+++|++|||+|. ..+..+++.++++|+++.+|...+.    ......    ..
T Consensus       217 -~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~  286 (355)
T cd08230         217 -ELGATY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNR  286 (355)
T ss_pred             -HcCCEE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhh
Confidence             999986 566554 4433 21  12479999999997 6789999999999999999875431    111122    34


Q ss_pred             HHhhcceeeeeeeecccccchHHHHHHHHHHHHCCC------eeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          197 YLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK------LVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .++.+++++.|+...+     .+.++.+++++.++.      +++.++++|+++|+++|++.+.++.  .|+++.+
T Consensus       287 ~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         287 DLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             hHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            6778999999876543     345677888887665      5666788999999999999887654  4999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.5e-31  Score=226.77  Aligned_cols=252  Identities=18%  Similarity=0.183  Sum_probs=192.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe----------------------------------------ccceeeEEEecCC--
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------MTGWEEYSLITAP--   41 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--   41 (269)
                      -|++|+|+++|++|+++++||||+.                                        .|+|+||+++|..  
T Consensus        67 hE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~  146 (393)
T TIGR02819        67 HEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADF  146 (393)
T ss_pred             ceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhC
Confidence            4689999999999999999999944                                        1789999999974  


Q ss_pred             ceeecCCCCCCcc---hhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEE-EEEeCCHHHH
Q 024337           42 YLFKIQHTDVPLS---YYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYV-VGSAGSKDKV  117 (269)
Q Consensus        42 ~~~~~~p~~~~~~---~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V-~~~~~s~~~~  117 (269)
                      +++++ |++++..   ..++++.+++.++|+++. .++++++++|+|.|+ |++|++++|+|+.+|+++ +++++++++.
T Consensus       147 ~l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~  223 (393)
T TIGR02819       147 NLLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARL  223 (393)
T ss_pred             ceEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence            79999 8764321   135788889999999984 578999999999765 999999999999999964 4456678899


Q ss_pred             HHHHHHcCCceeEecC-ChhhHHHHHHHHCCC-CccEEEeCCCch---------------hHhhhHhhhhcCCEEEEEec
Q 024337          118 DLLKNKFGFDEAFNYK-EEADLNAALKRYFPE-GIDVYFENVGGK---------------TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       118 ~~~~~~~g~~~~~~~~-~~~~~~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++++ ++|++. +++. +. ++.+.+.+.+++ ++|++|||+|..               .+..++++++++|+++.+|.
T Consensus       224 ~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~  300 (393)
T TIGR02819       224 AQAR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGL  300 (393)
T ss_pred             HHHH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeee
Confidence            9999 999974 5543 33 567778877766 899999999973               79999999999999999998


Q ss_pred             ccc-ccCCC------CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eee-hccccccHHHHH
Q 024337          181 ISQ-YNLDK------PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VED-MAEGLESAPAAL  250 (269)
Q Consensus       181 ~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~  250 (269)
                      ... .....      ............+++++.+...     ...+++..+++++.+|++++  .++ ++|+|+|+++||
T Consensus       301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~  375 (393)
T TIGR02819       301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGY  375 (393)
T ss_pred             cCCcccccccccccccccccchHHhhccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHH
Confidence            531 10000      0111223344455566655321     11345578999999999875  345 689999999999


Q ss_pred             HHHhcCCCcceEEEEec
Q 024337          251 IGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       251 ~~~~~~~~~gkvvv~~~  267 (269)
                      +.+.++.. +|+++.++
T Consensus       376 ~~~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       376 AEFDAGAA-KKFVIDPH  391 (393)
T ss_pred             HHHhhCCc-eEEEEeCC
Confidence            99988754 89999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.7e-31  Score=222.83  Aligned_cols=249  Identities=24%  Similarity=0.250  Sum_probs=202.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-----------------------------------cceeeEEEecCCceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-----------------------------------TGWEEYSLITAPYLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~~p   48 (269)
                      =|++|+|+++| .++.+++||||+..                                   |+|+||+.+|.++.+++.|
T Consensus        61 HE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~p  139 (350)
T COG1063          61 HEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLP  139 (350)
T ss_pred             ccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCC
Confidence            47889999999 77889999999533                                   6899999999876665537


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      +++  +.++|++..++.+++++........++.+|+|+|+ |++|++++++++.+|+ +|++++++++|++++++..+++
T Consensus       140 d~~--~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~  216 (350)
T COG1063         140 DGI--DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD  216 (350)
T ss_pred             CCC--ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe
Confidence            763  55789999999999888545555666669999998 9999999999999998 8899999999999999336777


Q ss_pred             eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337          128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM  205 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (269)
                      .+++.... +....+.+.+++ ++|++|||+|. ..+..+++.++++|+++.+|.....     ........++.+++++
T Consensus       217 ~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~-----~~~~~~~~~~~kel~l  290 (350)
T COG1063         217 VVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGE-----DIPLPAGLVVSKELTL  290 (350)
T ss_pred             EeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCc-----cCccCHHHHHhcccEE
Confidence            66666554 566777788888 99999999997 7789999999999999999986531     1145567889999999


Q ss_pred             eeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCC-cceEEEEe
Q 024337          206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQN-VGKQVVAV  266 (269)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  266 (269)
                      .|+...    .....++.+++++.+|++++.  +++.+++++++++++.+.+... ..|+++.+
T Consensus       291 ~gs~~~----~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         291 RGSLRP----SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             EeccCC----CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            998431    124568999999999999864  4567789999999999987554 45887753

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=2.8e-31  Score=226.52  Aligned_cols=252  Identities=19%  Similarity=0.242  Sum_probs=208.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .|++|+|+++|++++.+++||+|++.                               |+|+||+.++.+.++++ |++++
T Consensus        83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~v-P~~l~  161 (398)
T TIGR01751        83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPK-PKHLT  161 (398)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEEC-CCCCC
Confidence            35789999999999999999999763                               78999999999999999 88854


Q ss_pred             cchhhhhcCCcchhHHHHHHH--hhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE
Q 024337           53 LSYYTGILGMPGMTAYVGFYE--VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF  130 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~--~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~  130 (269)
                      .. +++.+..++.+||+++..  .+++.++++++|+|++|++|++++++|+++|++++++++++++.+.++ ++|++.++
T Consensus       162 ~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~v  239 (398)
T TIGR01751       162 WE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAVI  239 (398)
T ss_pred             HH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEEe
Confidence            43 477888999999999854  467899999999999999999999999999999999988999999998 79998888


Q ss_pred             ecCCh---------------------hhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCC
Q 024337          131 NYKEE---------------------ADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDK  188 (269)
Q Consensus       131 ~~~~~---------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  188 (269)
                      |.++.                     ..+.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+|.....    
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----  315 (398)
T TIGR01751       240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGY----  315 (398)
T ss_pred             cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCC----
Confidence            86431                     0244556667765 899999999988889999999999999999875431    


Q ss_pred             CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                       ........++.++.++.++....     .+.+..+++++.++.+.+.+..++++++++++++.+.+++..||+|+.+..
T Consensus       316 -~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~  389 (398)
T TIGR01751       316 -NHDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA  389 (398)
T ss_pred             -CCCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence             11233445556677776665433     334678899999999988777889999999999999999989999998754

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=5.7e-32  Score=220.33  Aligned_cols=227  Identities=18%  Similarity=0.208  Sum_probs=183.7

Q ss_pred             CcccceEEEEeccCCC------CCCCCCeEEe-------------------------------------ccceeeEEEec
Q 024337            3 PISGYGVAKVLDSENP------EFSKGDLVWG-------------------------------------MTGWEEYSLIT   39 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~~~v~   39 (269)
                      -=|++|+|+++|++|+      ++++||||+.                                     .|+|+||++++
T Consensus         3 GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~   82 (280)
T TIGR03366         3 GHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLP   82 (280)
T ss_pred             CcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEec
Confidence            3488999999999999      8999999953                                     16799999999


Q ss_pred             CC-ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHH
Q 024337           40 AP-YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKV  117 (269)
Q Consensus        40 ~~-~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~  117 (269)
                      ++ .++++ |++++.. .++++++.+.|+|+++.. ....++++|+|+|+ |++|++++|+||.+|++ |+++++++++.
T Consensus        83 ~~~~~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        83 AGTAIVPV-PDDLPDA-VAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             CCCcEEEC-CCCCCHH-HhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            98 79999 9885543 477888899999999844 55679999999987 99999999999999995 89998899999


Q ss_pred             HHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccch
Q 024337          118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL  195 (269)
Q Consensus       118 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  195 (269)
                      ++++ ++|++.+++..+   ..+.+.+.+++ ++|++|||+|. ..+..++++++++|+++.+|....    ......++
T Consensus       159 ~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~~~i~~  230 (280)
T TIGR03366       159 ELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP----GGPVALDP  230 (280)
T ss_pred             HHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC----CCceeeCH
Confidence            9999 999988887643   34456666655 89999999996 678999999999999999986421    11223556


Q ss_pred             HHHhhcceeeeeeeecccccchHHHHHHHHHHHHCC--Cee--eeeehccccccH
Q 024337          196 MYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG--KLV--YVEDMAEGLESA  246 (269)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~~~~~~~~~~  246 (269)
                      ..++.+++++.++....     .+.++++++++.++  .+.  +.++++|+++|+
T Consensus       231 ~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       231 EQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            78889999999876543     56788999999874  333  456778888763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=2.1e-31  Score=222.13  Aligned_cols=257  Identities=50%  Similarity=0.784  Sum_probs=210.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecC-CceeecCCCCCCcch-hhhh-cCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITA-PYLFKIQHTDVPLSY-YTGI-LGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~p~~~~~~~-~~a~-l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .|++|+|+++|++  .+++||+|+++++|++|+.++. +.++++ |++++.++ .+++ +++++.+||+++...+++.++
T Consensus        70 ~e~~G~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~  146 (329)
T cd05288          70 GGGVGEVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASGLRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPG  146 (329)
T ss_pred             CceEEEEEecCCC--CCCCCCEEecccceEEEEEecchhhcEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCC
Confidence            4788999999964  7999999999999999999999 999999 88853122 3444 999999999999777889999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      ++|+|+|++|++|+++++++++.|++|+++++++++.+.+++.+|++.++++++. ++.+.+.+.+++++|+++||+|+.
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~  225 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGE  225 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHH
Confidence            9999999999999999999999999999999999999999833999889988876 777777777655899999999998


Q ss_pred             hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehc
Q 024337          161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA  240 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  240 (269)
                      .+..++++++++|+++.+|..............+....+.+++++.+...........+.+..+++++.++.+++.....
T Consensus       226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~  305 (329)
T cd05288         226 ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVV  305 (329)
T ss_pred             HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccccc
Confidence            89999999999999999986442110000001234556778888888765443323356788899999999998766667


Q ss_pred             cccccHHHHHHHHhcCCCcceEEE
Q 024337          241 EGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       241 ~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +++++++++++.+.+++..+|+++
T Consensus       306 ~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         306 EGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             ccHHHHHHHHHHHhcCCCccceeC
Confidence            899999999999998887888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=3.1e-31  Score=222.14  Aligned_cols=244  Identities=22%  Similarity=0.266  Sum_probs=205.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|.++|++++.+++||+|+++                              |+|++|+.++.++++++ |++++.
T Consensus        63 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-P~~ls~  141 (340)
T cd05284          63 HENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKL-PRGLDP  141 (340)
T ss_pred             cceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEEC-CCCCCH
Confidence            46789999999999999999999864                              68999999999999999 988544


Q ss_pred             chhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           54 SYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      . ++++++..+.|||+++... ..+.++++|+|+|+ +++|++++++|+..| .+|+++++++++.+.++ ++|++++++
T Consensus       142 ~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~  218 (340)
T cd05284         142 V-EAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLN  218 (340)
T ss_pred             H-HhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEc
Confidence            3 5789999999999999766 46889999999996 679999999999999 79999999999999998 999988888


Q ss_pred             cCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          132 YKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      +++  .+.+.+++.+++ ++|+++||+|+ ..+..++++++++|+++.+|....       ........+.+++++.+..
T Consensus       219 ~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~  289 (340)
T cd05284         219 ASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSL  289 (340)
T ss_pred             CCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEe
Confidence            876  466777777766 89999999996 788999999999999999986431       1222334457888888776


Q ss_pred             ecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ...     .+.+..+++++.++.+++.+ ..+++++++++++.+.+++..||+++.+
T Consensus       290 ~~~-----~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         290 WGT-----RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             ccc-----HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            432     45688899999999988643 5689999999999999998889999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7.4e-31  Score=219.95  Aligned_cols=247  Identities=22%  Similarity=0.274  Sum_probs=209.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .+++|+|+++|++++.+++||+|+.                               .|+|++|+.++.+.++++ |++++
T Consensus        62 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~l-p~~~~  140 (341)
T cd08297          62 HEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPI-PDGLS  140 (341)
T ss_pred             cccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEEC-CCCCC
Confidence            4788999999999999999999985                               378999999999999999 88854


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .. ++++++..+.+||+++.. .+++++++++|+|+++++|++++++|+++|++|+++++++++.+.++ ++|++.++++
T Consensus       141 ~~-~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~  217 (341)
T cd08297         141 FE-QAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDF  217 (341)
T ss_pred             HH-HHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcC
Confidence            44 477899999999999965 58999999999999888999999999999999999999999999997 8999989998


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      ++. ++.+.+.+.+++ ++|+++||.++ .....++++++++|+++.+|....     .....+...++.+++++.+...
T Consensus       218 ~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~  291 (341)
T cd08297         218 KKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSLV  291 (341)
T ss_pred             CCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEecc
Confidence            876 778888887765 89999997774 788899999999999999986432     1123344566678888877543


Q ss_pred             cccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ..     .+.++.+++++.++.+.+.+ ..+++++++++++.+.++...||+++++
T Consensus       292 ~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         292 GT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             CC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            32     57788899999999987654 5689999999999999998899999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.3e-31  Score=222.36  Aligned_cols=249  Identities=24%  Similarity=0.301  Sum_probs=209.3

Q ss_pred             cccceEEEEeccCCCC---CCCCCeEEe----------------------------------------------------
Q 024337            4 ISGYGVAKVLDSENPE---FSKGDLVWG----------------------------------------------------   28 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~---~~~Gd~V~~----------------------------------------------------   28 (269)
                      .|++|+|+.+|++++.   +++||+|++                                                    
T Consensus        59 ~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (367)
T cd08263          59 HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYS  138 (367)
T ss_pred             cccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccccc
Confidence            4789999999999988   999999987                                                    


Q ss_pred             ccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-E
Q 024337           29 MTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-V  107 (269)
Q Consensus        29 ~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V  107 (269)
                      .|+|++|+.++.+.++++ |++++.. ++++++.++.+||+++...+.+.++++|+|+| +|++|++++++|+.+|++ |
T Consensus       139 ~g~~~~~~~~~~~~~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~v  215 (367)
T cd08263         139 MGGLAEYAVVPATALAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPI  215 (367)
T ss_pred             CCcceeEEEechhhEEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeE
Confidence            278999999999999999 9986544 58899999999999998878889999999996 599999999999999997 9


Q ss_pred             EEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCch-hHhhhHhhhhcCCEEEEEecccccc
Q 024337          108 VGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYN  185 (269)
Q Consensus       108 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~  185 (269)
                      ++++.++++.+.++ ++|++.+++++.. ++.+.+.+..++ ++|+++||+|+. .+..++++++++|+++.++....  
T Consensus       216 i~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~--  291 (367)
T cd08263         216 IAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG--  291 (367)
T ss_pred             EEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC--
Confidence            98988999999998 8999999998876 777788877665 899999999986 88999999999999999976431  


Q ss_pred             CCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEE
Q 024337          186 LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQV  263 (269)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvv  263 (269)
                        ......+...++.+++++.++....    ..+.++.+++++.++.+.+.  +...++++++.++++.+.+++..||+|
T Consensus       292 --~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~  365 (367)
T cd08263         292 --GATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAI  365 (367)
T ss_pred             --CCccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceee
Confidence              1122234455557888877743221    24678889999999998864  557789999999999999998889998


Q ss_pred             EE
Q 024337          264 VA  265 (269)
Q Consensus       264 v~  265 (269)
                      |+
T Consensus       366 ~~  367 (367)
T cd08263         366 VE  367 (367)
T ss_pred             eC
Confidence            74

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.4e-31  Score=222.42  Aligned_cols=233  Identities=15%  Similarity=0.162  Sum_probs=181.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------cceeeEEEecCCceeecCCCCCCcchh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------TGWEEYSLITAPYLFKIQHTDVPLSYY   56 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~   56 (269)
                      -|++|+|+++|.+  .|++||+|+..                           |+|+||+++|+++++++ |++  ++++
T Consensus        64 hE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v-P~~--l~~~  138 (341)
T cd08237          64 HEGIGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKL-PDN--VDPE  138 (341)
T ss_pred             ceeEEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEEC-CCC--CChH
Confidence            4678888887764  69999999752                           77999999999999999 888  4445


Q ss_pred             hhhcCCcchhHHHHHHHh--hcCCCCCEEEEecCcchHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           57 TGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKL-LG-CYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        57 ~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~vG~~~i~~a~~-~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .|+++.++.++|+++...  +.++++++|+|.|+ |++|++++|++++ +| .+|+++++++++.++++ .++..+.++ 
T Consensus       139 ~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-  215 (341)
T cd08237         139 VAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-  215 (341)
T ss_pred             HhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-
Confidence            667888999999998543  34688999999997 9999999999986 55 58999999999999998 666543221 


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc----hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG----KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG  207 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (269)
                          ++.       .+ ++|++|||+|+    ..+..++++++++|+++.+|....      ....++..++.+++++.+
T Consensus       216 ----~~~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g  278 (341)
T cd08237         216 ----DIP-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVG  278 (341)
T ss_pred             ----hhh-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEE
Confidence                111       12 69999999994    468999999999999999986421      123445667889999998


Q ss_pred             eeecccccchHHHHHHHHHHHHCC-----Ceeeeeehccccc---cHHHHHHHHhcCCCcceEEEEec
Q 024337          208 FIVLDHYHLYPKFLEMIIPHIKEG-----KLVYVEDMAEGLE---SAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~---~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      +....     .+.++++++++.++     .+++.++++|+++   ++.++++.+.++ ..||+|++++
T Consensus       279 ~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         279 SSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             ecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            76532     45688899999988     5677788889875   556666655554 5789999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.4e-31  Score=220.81  Aligned_cols=229  Identities=15%  Similarity=0.169  Sum_probs=178.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------ccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHH
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------MTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGF   71 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l   71 (269)
                      -|++|+|+++|+++ .|++||+|+.            .|+|+||++++++.++++ |++++  .+++. ...+.+||+++
T Consensus        64 hE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~i-p~~~~--~~~a~-~~~~~~a~~~~  138 (308)
T TIGR01202        64 YESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRL-DPALG--PQGAL-LALAATARHAV  138 (308)
T ss_pred             ceeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeC-CCCCC--HHHHh-hhHHHHHHHHH
Confidence            46889999999998 5999999984            489999999999999999 88744  34443 45678999999


Q ss_pred             HHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCc
Q 024337           72 YEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        72 ~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .+ . ..++++++|+|+ |++|++++|+|+.+|++ |++++.++++++.+. .+   .++|+.+  .        .+.++
T Consensus       139 ~~-~-~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~  201 (308)
T TIGR01202       139 AG-A-EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDY  201 (308)
T ss_pred             Hh-c-ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCC
Confidence            54 3 346889999986 99999999999999996 556666666666554 32   3454321  1        12379


Q ss_pred             cEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHH
Q 024337          151 DVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK  229 (269)
Q Consensus       151 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (269)
                      |++|||+|+ ..+..++++++++|+++.+|....      ....++..++.+++++.++..+.     .+.++++++++.
T Consensus       202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~  270 (308)
T TIGR01202       202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIE  270 (308)
T ss_pred             CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHHHHHHHHHH
Confidence            999999998 578999999999999999987432      12234456677888888765433     567999999999


Q ss_pred             CCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          230 EGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       230 ~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      +|.+++  .+++.|+|+|+++|++.+.++...+|++++
T Consensus       271 ~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       271 SGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             cCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            999876  477889999999999998877667899874

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.4e-30  Score=217.15  Aligned_cols=256  Identities=35%  Similarity=0.567  Sum_probs=211.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE   81 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~   81 (269)
                      .+++|+|..+|++++.+++||+|+++  |+|++|+.++.+.++++ |++  .. ++++++.++.+||+++....++++++
T Consensus        66 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~  141 (329)
T cd08250          66 FEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGE  141 (329)
T ss_pred             ceeEEEEEEECCCCCCCCCCCEEEEecCcceeEEEEechHHeEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCC
Confidence            46789999999999999999999986  89999999999999999 876  33 57889999999999997778899999


Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchh
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT  161 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  161 (269)
                      +++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++.+++.++. ++.+.+.+..++++|+++||+|+..
T Consensus       142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~  219 (329)
T cd08250         142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEM  219 (329)
T ss_pred             EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHH
Confidence            9999999999999999999999999999999999999998 8999888887775 6767776655458999999999988


Q ss_pred             HhhhHhhhhcCCEEEEEeccccccCCC-C---CCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeee
Q 024337          162 LDAVLPNMKIRGRIAACGMISQYNLDK-P---EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVE  237 (269)
Q Consensus       162 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  237 (269)
                      +..++++++++|+++.+|......... .   .........+.+++++.++....+.....+.+.++++++.++.+.+..
T Consensus       220 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  299 (329)
T cd08250         220 FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEV  299 (329)
T ss_pred             HHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeE
Confidence            999999999999999998754210000 0   001112345778888888876543323466788899999999988743


Q ss_pred             --ehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          238 --DMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       238 --~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                        ...++++++++|++.+.+++..+|++++
T Consensus       300 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         300 DPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             CCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence              3458999999999999988888898874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-30  Score=218.14  Aligned_cols=249  Identities=23%  Similarity=0.278  Sum_probs=208.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCC--ceeecCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAP--YLFKIQHTDV   51 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~~~~~p~~~   51 (269)
                      .+++|+|+.+|++++.+++||+|++                              .|+|++|+.++.+  .++++ |+++
T Consensus        60 ~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~i-P~~~  138 (345)
T cd08260          60 HEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRL-PDDV  138 (345)
T ss_pred             cceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEEC-CCCC
Confidence            5788999999999999999999986                              3789999999985  89999 9885


Q ss_pred             CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      +.. +++.++.++.+||+++...+++.++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|++++++
T Consensus       139 ~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~  215 (345)
T cd08260         139 DFV-TAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVN  215 (345)
T ss_pred             CHH-HhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEc
Confidence            543 57888999999999997778899999999999 599999999999999999999999999999998 899999998


Q ss_pred             cCC-hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          132 YKE-EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       132 ~~~-~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      +++ . ++.+.+.+..++++|++|||+|+ ..+..++++++++|+++.+|......   ......+..++.+++++.+..
T Consensus       216 ~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~  291 (345)
T cd08260         216 ASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVGSH  291 (345)
T ss_pred             cccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEeCC
Confidence            887 5 77777777665589999999995 78889999999999999998743210   012234455667888887765


Q ss_pred             ecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      ...     .+.++.++++++++.+.+.  +...+++++++++++.+.+++..+|+|++
T Consensus       292 ~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         292 GMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             cCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            432     5678889999999988753  55778999999999999999888998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.6e-30  Score=218.70  Aligned_cols=245  Identities=20%  Similarity=0.250  Sum_probs=205.2

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCcc
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPLS   54 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~~   54 (269)
                      +++|+|.++|++++.+++||+|+++                              |+|++|+.++.+.++++ |++++..
T Consensus        73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~s~~  151 (350)
T cd08240          73 EIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVD-PGGLDPA  151 (350)
T ss_pred             ceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeC-CCCCCHH
Confidence            6789999999999999999999864                              68999999999999999 8885544


Q ss_pred             hhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           55 YYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        55 ~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                       +++++++.+.+||+++.....+.++++|+|+| +|++|++++|+|+.+|+ +|++++.++++.+.++ ++|++.+++.+
T Consensus       152 -~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~  228 (350)
T cd08240         152 -LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVNGS  228 (350)
T ss_pred             -HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEecCC
Confidence             57788999999999997776677899999996 59999999999999999 7999998999999997 89998888887


Q ss_pred             ChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          134 EEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      +. ++.+.+.+..++++|++||++|. ..+..++++|+++|+++.++.....      ..........+++++.+.....
T Consensus       229 ~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~  301 (350)
T cd08240         229 DP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGS  301 (350)
T ss_pred             Cc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCC
Confidence            75 67777777665589999999995 7889999999999999999764321      1122233445777877766543


Q ss_pred             cccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                           .+++..++++++++.+++.....+++++++++++.+.+++..+|++++
T Consensus       302 -----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         302 -----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             -----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence                 367888999999999887666789999999999999998888999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.6e-30  Score=219.54  Aligned_cols=250  Identities=24%  Similarity=0.335  Sum_probs=206.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe----------------------------------------------------ccc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------------------MTG   31 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------------------~g~   31 (269)
                      -|++|+|+++|++++.+++||+|++                                                    .|+
T Consensus        61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  140 (365)
T cd08278          61 HEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSS  140 (365)
T ss_pred             cceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccc
Confidence            4789999999999999999999983                                                    278


Q ss_pred             eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337           32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS  110 (269)
Q Consensus        32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~  110 (269)
                      |++|+.++.++++++ |++++.. .++++++++.+||.++...+.++++++|+|+|+ |++|++++|+|+..|+ .++++
T Consensus       141 ~~~y~~v~~~~~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~  217 (365)
T cd08278         141 FATYAVVHERNVVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAV  217 (365)
T ss_pred             eeeEEEecchhEEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999999999 9985543 478999999999999878788999999999975 9999999999999999 68899


Q ss_pred             eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCC
Q 024337          111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKP  189 (269)
Q Consensus       111 ~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  189 (269)
                      ++++++.+.++ ++|++.+++++.. ++.+.+.+.++.++|+++||+|. ..+..++++++++|+++.+|....    ..
T Consensus       218 ~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~  291 (365)
T cd08278         218 DIVDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----GA  291 (365)
T ss_pred             eCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----CC
Confidence            88999999888 8999989988876 77777877774489999999996 788999999999999999987421    11


Q ss_pred             CCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee-eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY-VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      ....+...++.+++++.++.....  ...+.+..+++++.++.+.+ .+...+++++++++++.+.+++.. |++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         292 EVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             ccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            223445556678888887765332  12567788999999998864 234578999999999999887754 77763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.2e-30  Score=213.82  Aligned_cols=244  Identities=23%  Similarity=0.291  Sum_probs=202.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .|++|+|+++|++++.+++||+|+++   |+|++|+.++.+.++++ |++++.. +++++++.+.+||+++...... ++
T Consensus        57 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~  133 (305)
T cd08270          57 WDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LG  133 (305)
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CC
Confidence            57889999999999999999999986   79999999999999999 8885544 5788999999999999665544 69


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      ++++|+|++|++|++++++++.+|++|+.+++++++.+.++ ++|++..++...  +       ..++++|+++||+|+.
T Consensus       134 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~  203 (305)
T cd08270         134 RRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGP  203 (305)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcH
Confidence            99999999999999999999999999999999999999999 799875553221  1       1224799999999998


Q ss_pred             hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh--cceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeee
Q 024337          161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS--KRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED  238 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  238 (269)
                      .+..++++++++|+++.+|....     ......+..+..  +++++.++.... +....+.+..+++++.++++.+.+.
T Consensus       204 ~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~  277 (305)
T cd08270         204 QLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIG  277 (305)
T ss_pred             HHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceec
Confidence            88999999999999999986431     112233444444  588888877653 2334567889999999999998777


Q ss_pred             hccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          239 MAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       239 ~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.+++++++++++.+.+++..||+++++
T Consensus       278 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         278 WRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             cEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            8899999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.3e-30  Score=217.68  Aligned_cols=249  Identities=20%  Similarity=0.219  Sum_probs=199.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe---------------------------------ccceeeEEEecCC--ceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------------MTGWEEYSLITAP--YLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~p   48 (269)
                      -|++|+|+++|++++.+++||+|++                                 .|+|+||+.++.+  .++++ |
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~l-P  137 (351)
T cd08285          59 HEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPL-P  137 (351)
T ss_pred             cceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEEC-C
Confidence            4788999999999999999999986                                 2789999999975  89999 8


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      ++++.. +++.++..+.++|+++ ..++++++++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+.++ ++|++
T Consensus       138 ~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~  213 (351)
T cd08285         138 DGLTDE-QAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGAT  213 (351)
T ss_pred             CCCCHH-HhhhhccchhhHHHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCc
Confidence            885443 5778889999999997 6678999999999975 9999999999999999 6889988888999998 89999


Q ss_pred             eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc--hHHHhhcce
Q 024337          128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN--LMYLVSKRL  203 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~  203 (269)
                      ++++++.. ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|.....    .....+  ......+..
T Consensus       214 ~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~  288 (351)
T cd08285         214 DIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHK  288 (351)
T ss_pred             eEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhcccc
Confidence            99998876 777888777765 89999999997 6889999999999999999864321    000111  111223344


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHCCCeee---eeehccccccHHHHHHHHhcCCC-cceEEEEe
Q 024337          204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY---VEDMAEGLESAPAALIGLFSGQN-VGKQVVAV  266 (269)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  266 (269)
                      ++.+....    ...++++.+++++.+|++++   .....++++++++|++.+.+++. ..|++|++
T Consensus       289 ~i~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         289 TINGGLCP----GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             EEEEeecC----CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            44433221    12466888999999999987   34456899999999999998874 67999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.98  E-value=3.7e-30  Score=214.51  Aligned_cols=254  Identities=23%  Similarity=0.229  Sum_probs=204.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      .|++|+|+.+|++++.+++||+|+..    |+|++|+.++.+.++++ |++++.. +++.++..+.++|.++...+++++
T Consensus        63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~  140 (327)
T PRK10754         63 TEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKP  140 (327)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCC
Confidence            57889999999999999999999754    79999999999999999 8885443 467788899999999877788999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      +++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++.+.. ++.+.+++.+++ ++|+++||+|
T Consensus       141 g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~  218 (327)
T PRK10754        141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVG  218 (327)
T ss_pred             CCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCc
Confidence            999999999999999999999999999999999999999998 8999888888776 788888888876 8999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee-eeeeeccc---ccchHHHHHHHHHHHHCCCee
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM-EGFIVLDH---YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      +.....++++++++|+++.+|....     .........+..++..+ .......+   +....+.+..+++++.+|.++
T Consensus       219 ~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~  293 (327)
T PRK10754        219 KDTWEASLDCLQRRGLMVSFGNASG-----PVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIK  293 (327)
T ss_pred             HHHHHHHHHHhccCCEEEEEccCCC-----CCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCee
Confidence            9888899999999999999986431     11111222222222111 11111111   122344567789999999998


Q ss_pred             ee--eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          235 YV--EDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       235 ~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.  ..+.|++++++++++.+.+++..+|+|+.+
T Consensus       294 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        294 VDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             eecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            64  357899999999999999999899999863

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=7.5e-30  Score=211.48  Aligned_cols=254  Identities=26%  Similarity=0.375  Sum_probs=212.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .+++|+|..+|++++.+++||+|+++   |+|++|+.++.+.++++ |++++.. ++++++..+.++|+++...+++.++
T Consensus        60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g  137 (320)
T cd05286          60 VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPG  137 (320)
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCC
Confidence            47889999999999999999999985   69999999999999999 8885444 4778899999999999777889999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++..+. ++.+.+.+.+.+ ++|.++||+|+
T Consensus       138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~  215 (320)
T cd05286         138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGK  215 (320)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCc
Confidence            99999999999999999999999999999999999999997 8999888887776 777888887766 89999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCCCeeee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLVYV  236 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~  236 (269)
                      .....++++++++|+++.+|....     ......+..+..+++++.+.....+   +....+.+..+++++.++.+.+.
T Consensus       216 ~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  290 (320)
T cd05286         216 DTFEGSLDSLRPRGTLVSFGNASG-----PVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE  290 (320)
T ss_pred             HhHHHHHHhhccCcEEEEEecCCC-----CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc
Confidence            888899999999999999986432     1112233344477888766544332   23345567788899999988877


Q ss_pred             eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          237 EDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ....|++++++++++.+.+++..+|+++++
T Consensus       291 ~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         291 IGKRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            667899999999999999888888998864

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=3.9e-30  Score=213.56  Aligned_cols=247  Identities=22%  Similarity=0.288  Sum_probs=202.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV   74 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~   74 (269)
                      .|++|+|+++|+  +.+++||+|+++         |+|++|+.++.+.++++ |++++.. +++++++++.+||+++...
T Consensus        62 ~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~  137 (320)
T cd08243          62 IEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAI-DSDLSWA-ELAALPETYYTAWGSLFRS  137 (320)
T ss_pred             ceeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeC-CCCCCHH-HHHhcchHHHHHHHHHHHh
Confidence            478899999995  579999999986         78999999999999999 8885443 5789999999999999887


Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      .+++++++|+|+|++|++|++++++|+++|++|+++++++++.+.++ ++|++++++. .. ++.+.+.+. +.++|+++
T Consensus       138 ~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl  213 (320)
T cd08243         138 LGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVL  213 (320)
T ss_pred             cCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEE
Confidence            88999999999999999999999999999999999999999999998 8999877754 43 667777777 45899999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHH--HhhcceeeeeeeecccccchHHHHHHHHHHHHCCC
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMY--LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      ||+|+..+..++++++++|+++.+|......   .........  .+.+++++.++....   ...+.++.+++++.++.
T Consensus       214 ~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  287 (320)
T cd08243         214 ELVGTATLKDSLRHLRPGGIVCMTGLLGGQW---TLEDFNPMDDIPSGVNLTLTGSSSGD---VPQTPLQELFDFVAAGH  287 (320)
T ss_pred             ECCChHHHHHHHHHhccCCEEEEEccCCCCc---ccCCcchhhhhhhccceEEEecchhh---hhHHHHHHHHHHHHCCc
Confidence            9999988999999999999999998643210   000011111  235667776665432   22456888999999999


Q ss_pred             eeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          233 LVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       233 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +++.....+++++++++++.+.+++..+|+++
T Consensus       288 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         288 LDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             eecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            98776678999999999999998888888876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=8.4e-30  Score=213.22  Aligned_cols=244  Identities=19%  Similarity=0.221  Sum_probs=202.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|+++|++++.+++||+|++                              .|+|++|+.++++ ++++ |++++.
T Consensus        59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~-p~~~~~  136 (337)
T cd08261          59 HELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLV-PEGLSL  136 (337)
T ss_pred             cccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEEC-CCCCCH
Confidence            4678999999999999999999986                              3789999999999 9999 998443


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . +++.+ ..+.++++++ ...++.++++|||+|+ |++|.+++|+|+.+|++|+++.+++++.+.++ ++|++++++++
T Consensus       137 ~-~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~  211 (337)
T cd08261         137 D-QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVG  211 (337)
T ss_pred             H-Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCc
Confidence            3 34444 6778888888 6788999999999974 89999999999999999999998999999997 89999999988


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          134 EEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      +. ++.+.+.+.+++ ++|+++||.|+ ..+..++++++++|+++.++....      ........+..+++++.+... 
T Consensus       212 ~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~~-  283 (337)
T cd08261         212 DE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSRN-  283 (337)
T ss_pred             cc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEecc-
Confidence            86 788888887766 89999999986 788899999999999999876431      112333455667777766531 


Q ss_pred             ccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcC-CCcceEEEEe
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSG-QNVGKQVVAV  266 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~~  266 (269)
                          ...+.++.+++++.++.+++  .+...+++++++++++.+.++ ...+|+|+++
T Consensus       284 ----~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         284 ----ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             ----CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence                23567888999999999987  666789999999999999988 4778999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.98  E-value=4.9e-30  Score=215.46  Aligned_cols=247  Identities=23%  Similarity=0.213  Sum_probs=202.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe---------------------------------ccceeeEEEecCC--ceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------------MTGWEEYSLITAP--YLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~p   48 (269)
                      .+++|+|+++|++++.+++||+|++                                 .|+|++|++++.+  .++++ |
T Consensus        60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P  138 (347)
T cd05278          60 HEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKI-P  138 (347)
T ss_pred             cceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEEC-C
Confidence            4688999999999999999999986                                 2789999999998  89999 9


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      ++++.. ++++++.++.+||+++ ...+++++++|+|.|+ |++|++++|+|+.+|+ +|+++.+++++.+.++ ++|++
T Consensus       139 ~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~  214 (347)
T cd05278         139 DGLPDE-DALMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGAT  214 (347)
T ss_pred             CCCCHH-HHhhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCc
Confidence            885433 4788899999999998 6788999999999765 9999999999999997 8999988888888888 89998


Q ss_pred             eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337          128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM  205 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (269)
                      .++++++. ++.+.+++.+++ ++|++|||+|+ ..+..++++|+++|+++.+|.....     .........+.+++++
T Consensus       215 ~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~  288 (347)
T cd05278         215 DIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLTF  288 (347)
T ss_pred             EEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeEE
Confidence            89988876 787888877765 89999999997 7889999999999999998754321     1001112334677777


Q ss_pred             eeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCC-cceEEEEe
Q 024337          206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQN-VGKQVVAV  266 (269)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  266 (269)
                      .+.....     .+.++.+++++.++.+++.  ....+++++++++++.+.+++. .+|+++++
T Consensus       289 ~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         289 KTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             EeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            6654322     5678889999999988863  4567899999999999988776 67888763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.97  E-value=1e-29  Score=216.11  Aligned_cols=248  Identities=23%  Similarity=0.241  Sum_probs=202.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------------------cccee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------------------MTGWE   33 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------------------~g~~~   33 (269)
                      .|++|+|+++|++++.+++||+|+.                                                  .|+|+
T Consensus        60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  139 (386)
T cd08283          60 HEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQA  139 (386)
T ss_pred             ccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeE
Confidence            5789999999999999999999965                                                  26899


Q ss_pred             eEEEecCC--ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337           34 EYSLITAP--YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS  110 (269)
Q Consensus        34 ~~~~v~~~--~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~  110 (269)
                      ||++++.+  .++++ |++++.. ++++++..+.+||+++ ..+++.++++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus       140 ~~~~v~~~~~~~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~  215 (386)
T cd08283         140 EYVRVPFADVGPFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAI  215 (386)
T ss_pred             EEEEcccccCeEEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence            99999988  89999 9885443 5778899999999999 7788999999999975 9999999999999998 69999


Q ss_pred             eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCch----------------------hHhhhHh
Q 024337          111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGK----------------------TLDAVLP  167 (269)
Q Consensus       111 ~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~----------------------~~~~~~~  167 (269)
                      ++++++.+.++ +++...++++....++.+.+.+.+++ ++|++|||+|++                      .+..+++
T Consensus       216 ~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (386)
T cd08283         216 DRVPERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQ  294 (386)
T ss_pred             cCCHHHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHH
Confidence            99999999999 77444677776641277778887776 899999999752                      5788999


Q ss_pred             hhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehcccccc
Q 024337          168 NMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLES  245 (269)
Q Consensus       168 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~  245 (269)
                      +++++|+++.+|....     ......+...+.+++++.+....     ..+.+..+++++.++.+.+.  +...+++++
T Consensus       295 ~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~  364 (386)
T cd08283         295 AVRKGGTVSIIGVYGG-----TVNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLED  364 (386)
T ss_pred             HhccCCEEEEEcCCCC-----CcCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHH
Confidence            9999999999986432     11223444567888888876432     25678889999999998863  556789999


Q ss_pred             HHHHHHHHhcCC-CcceEEEEe
Q 024337          246 APAALIGLFSGQ-NVGKQVVAV  266 (269)
Q Consensus       246 ~~~a~~~~~~~~-~~gkvvv~~  266 (269)
                      +++|++.+.++. ..+|+++++
T Consensus       365 ~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         365 APEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             HHHHHHHHHhCCCCeEEEEecC
Confidence            999999998876 458999853

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.97  E-value=1.1e-29  Score=212.56  Aligned_cols=245  Identities=25%  Similarity=0.323  Sum_probs=206.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|..+|++++.+++||+|+.                              .|+|++|+.++.+.++++ |++++.
T Consensus        62 ~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~  140 (338)
T cd08254          62 HEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPV-PDGVPF  140 (338)
T ss_pred             ccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEEC-CCCCCH
Confidence            4688999999999999999999986                              278999999999999999 888544


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . ++++++.++.+||+++....+++++++|+|.| +|++|++++++|+.+|++|+++++++++.+.++ ++|.+++++..
T Consensus       141 ~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~  217 (338)
T cd08254         141 A-QAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSL  217 (338)
T ss_pred             H-HhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCC
Confidence            3 57889999999999998878899999999976 599999999999999999999999999999998 89998888877


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          134 EEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      +. ...+.+ +..++ ++|+++||+|. ..+..++++|+++|+++.++....      ....+...++.++.++.++...
T Consensus       218 ~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~  289 (338)
T cd08254         218 DD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGG  289 (338)
T ss_pred             Cc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccC
Confidence            65 555556 44444 89999999985 688999999999999999976431      1223445677788887776543


Q ss_pred             ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .     .+.+..++++++++.+.+. ...+++++++++++.+.+++..+|+|+++
T Consensus       290 ~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         290 T-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             C-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            2     5678889999999998876 56789999999999999999899999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.97  E-value=1e-29  Score=213.20  Aligned_cols=244  Identities=22%  Similarity=0.238  Sum_probs=201.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCc-----eeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPY-----LFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~-----~~~~~p   48 (269)
                      .+++|+|+++|++++.+++||+|+++                              |+|++|+.++.+.     ++++ |
T Consensus        59 ~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P  137 (343)
T cd08235          59 HEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-P  137 (343)
T ss_pred             cceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-C
Confidence            46889999999999999999999974                              7899999999998     9999 9


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      +++  ++..|++..++.+||+++.. .+++++++|+|+| +|++|++++++|+..|++ |+++.+++++.+.++ ++|.+
T Consensus       138 ~~~--~~~~aa~~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~  212 (343)
T cd08235         138 DNV--SFEEAALVEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGAD  212 (343)
T ss_pred             CCC--CHHHHHhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCc
Confidence            984  43333344788999999954 5899999999997 599999999999999998 999988999999998 89998


Q ss_pred             eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337          128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM  205 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (269)
                      +++++++. ++.+.+.+.+++ ++|+++||+|+ ..+...+++++++|+++.++.....    ......+.....+++.+
T Consensus       213 ~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l  287 (343)
T cd08235         213 YTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITI  287 (343)
T ss_pred             EEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEE
Confidence            89988886 888888887766 89999999996 5888999999999999998864321    11223345566677777


Q ss_pred             eeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      .+.....     .+.++.+++++.++.+.+  .+...+++++++++++.+.+++ .+|+|+
T Consensus       288 ~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi  342 (343)
T cd08235         288 TGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVI  342 (343)
T ss_pred             EEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence            6655432     456888899999998863  3556789999999999999998 889986

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.97  E-value=1.3e-29  Score=212.11  Aligned_cols=245  Identities=24%  Similarity=0.305  Sum_probs=201.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .+++|+|.++|++++.|++||+|++                               .|+|+||+.++.++++++ |++++
T Consensus        59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~  137 (338)
T PRK09422         59 HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKV-PEGLD  137 (338)
T ss_pred             cccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeC-CCCCC
Confidence            4789999999999999999999985                               378999999999999999 98854


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      .. ++++++..+.|||+++ ..++++++++|+|+|+ |++|++++++|+. .|++|+++++++++.+.++ ++|++.+++
T Consensus       138 ~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~  213 (338)
T PRK09422        138 PA-QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTIN  213 (338)
T ss_pred             HH-HeehhhcchhHHHHHH-HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEec
Confidence            43 5788999999999998 6788999999999995 9999999999998 4999999999999999998 999988888


Q ss_pred             cCC-hhhHHHHHHHHCCCCcc-EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          132 YKE-EADLNAALKRYFPEGID-VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       132 ~~~-~~~~~~~i~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      ++. . ++.+.+++.++ ++| +++++.++..+..++++++++|+++.+|....      ....+......+..++.++.
T Consensus       214 ~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~  285 (338)
T PRK09422        214 SKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSL  285 (338)
T ss_pred             ccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEec
Confidence            764 4 66677777665 688 55555556889999999999999999986421      11234455566777776654


Q ss_pred             ecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      ...     .+.++.+++++.+|.+.+.+. .+++++++++++.+.+++..||+++.+.
T Consensus       286 ~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        286 VGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             CCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            322     466888999999999876654 5799999999999999998899998753

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=8.2e-30  Score=209.94  Aligned_cols=251  Identities=21%  Similarity=0.300  Sum_probs=205.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      .+++|+|.++|++++++++||+|+++     |+|++|++++.+.++++ |++++.. ++++++..+.++|+++ +..+++
T Consensus        43 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~aa~~~~~~~ta~~~l-~~~~~~  119 (303)
T cd08251          43 FEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQVVRK-PASLSFE-EACALPVVFLTVIDAF-ARAGLA  119 (303)
T ss_pred             ceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccHHHeEEC-CCCCCHH-HHHHhHHHHHHHHHHH-HhcCCC
Confidence            46889999999999999999999886     79999999999999999 9885444 5788899999999998 578899


Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~  157 (269)
                      ++++++|+++++++|++++++++.+|++|+++++++++.+.++ ++|++.+++.... ++...+.+.+++ ++|.++||+
T Consensus       120 ~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~  197 (303)
T cd08251         120 KGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTL  197 (303)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECC
Confidence            9999999999999999999999999999999999999999997 8999889988776 777888887776 899999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHCCCe
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~  233 (269)
                      ++..+..++++++++|+++.++.....    ....... ..+.+++.+....+...    +....+.+.++.+++.++.+
T Consensus       198 ~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  272 (303)
T cd08251         198 SGEAIQKGLNCLAPGGRYVEIAMTALK----SAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL  272 (303)
T ss_pred             cHHHHHHHHHHhccCcEEEEEeccCCC----ccCccCh-hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc
Confidence            988889999999999999998764311    0111122 22334444444333221    22345668888999999998


Q ss_pred             eeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      ++.....+++++++++++.+.+++..+|+++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         273 RPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             cCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            8777778999999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.97  E-value=1.6e-29  Score=210.46  Aligned_cols=250  Identities=23%  Similarity=0.357  Sum_probs=197.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV   74 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~   74 (269)
                      .|++|+|+++  +++.+++||+|++.         |+|++|+.++.+.++++ |++++.. +++.+++.+.++|.++...
T Consensus        63 ~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~  138 (325)
T cd05280          63 IDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL-PEGLSLR-EAMILGTAGFTAALSVHRL  138 (325)
T ss_pred             cccEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHH
Confidence            4678999888  56789999999974         78999999999999999 8885544 5788999999999998655


Q ss_pred             hcC--C-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           75 CSA--K-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        75 ~~~--~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      .+.  . .+++|+|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++++++.++. . ....+...++++|
T Consensus       139 ~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d  215 (325)
T cd05280         139 EDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARWA  215 (325)
T ss_pred             hhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCcc
Confidence            433  5 3579999999999999999999999999999999999999998 8999888876542 1 2222333334799


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHC
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKE  230 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  230 (269)
                      +++||+|+..+..++++++++|+++.+|.....     .....+..++.+++++.+....... ....+.++.+.+++..
T Consensus       216 ~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (325)
T cd05280         216 GAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP-----ELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKP  290 (325)
T ss_pred             EEEECCchHHHHHHHHhhcCCCEEEEEecCCCC-----ccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhc
Confidence            999999998999999999999999999875321     1123334455788888887764432 2334556667777777


Q ss_pred             CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +. .+.+..++++++++++++.+.+++..||+|+++
T Consensus       291 ~~-~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         291 DL-LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             CC-ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            73 344667899999999999999999899999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.97  E-value=1.7e-29  Score=211.94  Aligned_cols=244  Identities=21%  Similarity=0.224  Sum_probs=201.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------------------cceeeEEEecCC--ceeecC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------TGWEEYSLITAP--YLFKIQ   47 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~~~~~   47 (269)
                      .|++|+|.++|++++.+++||+|++.                                  |+|++|+.++.+  .++++ 
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~-  137 (344)
T cd08284          59 HEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKL-  137 (344)
T ss_pred             cceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEEC-
Confidence            46889999999999999999999872                                  789999999975  99999 


Q ss_pred             CCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC
Q 024337           48 HTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF  126 (269)
Q Consensus        48 p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~  126 (269)
                      |++++.. +++++++++.|||+++. ..++.++++|+|+| +|++|++++++|+.+|+ +|++++.++++.+.++ ++|+
T Consensus       138 p~~l~~~-~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~  213 (344)
T cd08284         138 PDGLSDE-AALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGA  213 (344)
T ss_pred             CCCCCHH-HhhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCC
Confidence            9885443 57889999999999995 47899999999997 59999999999999997 8999988888888888 8997


Q ss_pred             ceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337          127 DEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR  204 (269)
Q Consensus       127 ~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  204 (269)
                      . .++.+.. ++...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|....     ..........+.++++
T Consensus       214 ~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~  286 (344)
T cd08284         214 E-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTA-----EEFPFPGLDAYNKNLT  286 (344)
T ss_pred             e-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCC-----CCccccHHHHhhcCcE
Confidence            5 5676665 777788877765 89999999996 788999999999999999987532     1122334556777887


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      +.+..     ....+.+..+++++.++.+++  .+...+++++++++++.+.+++. +|+|++
T Consensus       287 ~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         287 LRFGR-----CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             EEEec-----CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            76442     123567889999999998875  35677899999999999988777 899875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.97  E-value=2.3e-29  Score=212.53  Aligned_cols=249  Identities=19%  Similarity=0.260  Sum_probs=200.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      .|++|+|.++|++++.+++||+|+++                                                   |+|
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~  138 (365)
T cd05279          59 HEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTF  138 (365)
T ss_pred             cceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccc
Confidence            46889999999999999999999853                                                   589


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~  111 (269)
                      ++|+.++.+.++++ |++++.. +++.+++++.+||+++...++++++++|+|+|+ |++|++++++|+.+|++ |++++
T Consensus       139 a~~~~v~~~~~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~  215 (365)
T cd05279         139 AEYTVVSEISLAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVD  215 (365)
T ss_pred             cceEEecCCceEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            99999999999999 9985544 477888899999999878889999999999975 99999999999999995 77777


Q ss_pred             CCHHHHHHHHHHcCCceeEecCChh-hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhh-cCCEEEEEeccccccCCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMK-IRGRIAACGMISQYNLDK  188 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~  188 (269)
                      +++++.+.++ ++|++++++..+.. ++.+.+.+.+++++|+++|++|. ..+..++++++ ++|+++.+|....    .
T Consensus       216 ~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~  290 (365)
T cd05279         216 INKDKFEKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----G  290 (365)
T ss_pred             CCHHHHHHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----C
Confidence            7999999997 99998888766520 35566777665689999999986 88899999999 9999999876421    1


Q ss_pred             CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      .....+...+ .++.++.|.....+  ...+.+..+++++.++.+++  ...++++++++++|++.+.+++.. |+++
T Consensus       291 ~~~~~~~~~~-~~~~~l~g~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         291 TEATLDPNDL-LTGRTIKGTVFGGW--KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             CceeeCHHHH-hcCCeEEEEeccCC--chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            1223344444 56677777655433  23567888999999998875  366788999999999999877654 5554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=211.45  Aligned_cols=244  Identities=25%  Similarity=0.335  Sum_probs=200.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .|++|+|+++|++++.+++||+|++.                              |+|++|+.++.+.++++ |++++.
T Consensus        60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~  138 (334)
T PRK13771         60 HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKV-PPNVSD  138 (334)
T ss_pred             ccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEEC-CCCCCH
Confidence            47889999999999899999999874                              68999999999999999 888554


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . +++.+++.+.++|+++... ++.++++++|+|++|++|++++++++++|++|+++++++++.+.++ ++ ++++++++
T Consensus       139 ~-~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~  214 (334)
T PRK13771        139 E-GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS  214 (334)
T ss_pred             H-HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch
Confidence            4 5788899999999999665 8999999999999999999999999999999999999999999987 77 66666554


Q ss_pred             ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337          134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH  213 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (269)
                         ++.+.+++.  +++|+++||+|+.....+++.++++|+++.+|.....    ..........+.+++++.+...   
T Consensus       215 ---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~---  282 (334)
T PRK13771        215 ---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHIS---  282 (334)
T ss_pred             ---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecC---
Confidence               344455554  3699999999998889999999999999999874321    1101222333567778777632   


Q ss_pred             ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                        ...+.++.+++++.++.+++.+...+++++++++++.+.+++..+|+++.+
T Consensus       283 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        283 --ATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             --CCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence              236678899999999999877778899999999999999888889999865

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.97  E-value=3e-29  Score=211.78  Aligned_cols=249  Identities=21%  Similarity=0.300  Sum_probs=204.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------------------cccee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------------------MTGWE   33 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------------------~g~~~   33 (269)
                      .+++|+|+.+|++++.+++||+|++                                                  .|+|+
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  138 (363)
T cd08279          59 HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFA  138 (363)
T ss_pred             ccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccce
Confidence            4778999999999999999999987                                                  27899


Q ss_pred             eEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeC
Q 024337           34 EYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAG  112 (269)
Q Consensus        34 ~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~  112 (269)
                      +|+.++.+.++++ |++++.. +++.+++.+.+||.++...+++.++++|+|+|+ |++|++++++|+..|++ |+++++
T Consensus       139 ~~~~~~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~  215 (363)
T cd08279         139 EYTVVPEASVVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDP  215 (363)
T ss_pred             eeEEeccccEEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcC
Confidence            9999999999999 9885544 577888899999999888889999999999965 99999999999999995 999998


Q ss_pred             CHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCC
Q 024337          113 SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPE  190 (269)
Q Consensus       113 s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  190 (269)
                      ++++.+.++ ++|++++++++.. ++...+.+.+++ ++|+++||+|+ ..+..++++++++|+++.++....    ...
T Consensus       216 ~~~~~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~  289 (363)
T cd08279         216 VPEKLELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----GET  289 (363)
T ss_pred             CHHHHHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----Ccc
Confidence            999999997 8999889988876 777888877755 89999999995 788999999999999999976431    112


Q ss_pred             CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEE
Q 024337          191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQV  263 (269)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv  263 (269)
                      .......+..++..+.++.....  ...+.++.+++++.++.+.+  .+.+.+++++++++++.+.+++..+.++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         290 VSLPALELFLSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             cccCHHHHhhcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            22344455556776666554221  23567888999999999875  3567899999999999999888765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.97  E-value=1.7e-29  Score=210.37  Aligned_cols=251  Identities=25%  Similarity=0.363  Sum_probs=193.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV   74 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~   74 (269)
                      -|++|+|++.  +++.+++||+|+..         |+|+||+.++.+.++++ |++++.. +++.+++.+.+||.++...
T Consensus        63 ~e~~G~V~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~  138 (326)
T cd08289          63 IDLAGTVVES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPL-PKGLTLK-EAMILGTAGFTAALSIHRL  138 (326)
T ss_pred             cceeEEEEEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHH
Confidence            3678888875  45779999999874         79999999999999999 8885443 4778888999999988544


Q ss_pred             hc---CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           75 CS---AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        75 ~~---~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      .+   ..++++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.+++.++.  ..+.+.+..++++|
T Consensus       139 ~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d  215 (326)
T cd08289         139 EENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWA  215 (326)
T ss_pred             HhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcC
Confidence            32   345789999999999999999999999999999999999999998 8999888887653  34455555444899


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHC
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE  230 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  230 (269)
                      +++||+|+..+..++++++++|+++.+|....     ......+..++.+++++.+...... .....+.+..+...+..
T Consensus       216 ~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (326)
T cd08289         216 GAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGG-----GEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKP  290 (326)
T ss_pred             EEEECCcHHHHHHHHHHhhcCCEEEEEeecCC-----CCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCc
Confidence            99999999889999999999999999987532     1112234556688898888754321 11123334444444332


Q ss_pred             CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.+...+.++++++++++|++.+.+++..||+++++
T Consensus       291 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         291 TQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             cccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            333334577899999999999999999889999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.9e-29  Score=207.74  Aligned_cols=247  Identities=20%  Similarity=0.197  Sum_probs=202.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE   81 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~   81 (269)
                      .+++|+|+++|++++.+++||+|+++  |+|++|+.++.+.++++ |+++  . .++.+..++.++++++. .+++++++
T Consensus        57 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~  131 (312)
T cd08269          57 HEGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADHAVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGK  131 (312)
T ss_pred             eeeEEEEEEECCCCcCCCCCCEEEEecCCcceeeEEEchhheEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCC
Confidence            46889999999999999999999986  79999999999999999 8874  2 23322378889999985 78899999


Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      +++|+| +|++|.+++++|+++|++ |+++++++++.++++ ++|++.+++.+.. ++.+.+.+.+++ ++|+++||.|+
T Consensus       132 ~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~  208 (312)
T cd08269         132 TVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGH  208 (312)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCC
Confidence            999997 599999999999999998 999999988988888 9999888887765 788888887776 89999999986


Q ss_pred             -hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--e
Q 024337          160 -KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--V  236 (269)
Q Consensus       160 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~  236 (269)
                       .....++++++++|+++.+|....     .....++..+..++..+.++...+ +....+.++.+++++.++.+.+  .
T Consensus       209 ~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~  282 (312)
T cd08269         209 QWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSL  282 (312)
T ss_pred             HHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhh
Confidence             678899999999999999986431     112233445666777776654333 2234578899999999999886  3


Q ss_pred             eehccccccHHHHHHHHhcCCC-cceEEE
Q 024337          237 EDMAEGLESAPAALIGLFSGQN-VGKQVV  264 (269)
Q Consensus       237 ~~~~~~~~~~~~a~~~~~~~~~-~gkvvv  264 (269)
                      +.+.+++++++++++.+.+++. .+|+++
T Consensus       283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         283 LTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            5577899999999999998865 478876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.97  E-value=1.3e-29  Score=212.11  Aligned_cols=246  Identities=22%  Similarity=0.263  Sum_probs=200.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-----------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHH
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-----------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFY   72 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~   72 (269)
                      .|++|+|+.+|++++.+++||+|+++           |+|++|+.++.+.++++ |++++.. .++.+++++.+||+++.
T Consensus        60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~  137 (339)
T cd08249          60 CDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKI-PDNISFE-EAATLPVGLVTAALALF  137 (339)
T ss_pred             eeeeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEEC-CCCCCHH-HceecchHHHHHHHHHh
Confidence            46789999999999999999999986           79999999999999999 8885444 47788999999999987


Q ss_pred             HhhcC----------CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHH
Q 024337           73 EVCSA----------KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAAL  142 (269)
Q Consensus        73 ~~~~~----------~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i  142 (269)
                      +..++          .++++++|+|++|++|++++++++.+|++|++++ ++++.+.++ ++|+++++++.+. ++.+.+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l  214 (339)
T cd08249         138 QKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDI  214 (339)
T ss_pred             ccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHH
Confidence            66554          7899999999999999999999999999999988 668889997 8999889998876 788888


Q ss_pred             HHHCCCCccEEEeCCCc-hhHhhhHhhhhc--CCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec-------c
Q 024337          143 KRYFPEGIDVYFENVGG-KTLDAVLPNMKI--RGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL-------D  212 (269)
Q Consensus       143 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  212 (269)
                      ++.+++++|+++|++|. ..+..+++++++  +|+++.++.....     .       .+..+.+.......       .
T Consensus       215 ~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~  282 (339)
T cd08249         215 RAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEE-----T-------EPRKGVKVKFVLGYTVFGEIPE  282 (339)
T ss_pred             HHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCcc-----c-------cCCCCceEEEEEeeeecccccc
Confidence            77776689999999998 899999999999  9999999764321     0       01112222222111       1


Q ss_pred             cccchHHHHHHHHHHHHCCCeeeeeehccc--cccHHHHHHHHhcCC-CcceEEEEe
Q 024337          213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEG--LESAPAALIGLFSGQ-NVGKQVVAV  266 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~gkvvv~~  266 (269)
                      .+......++.+.+++.++.+.+.....++  ++++++|++.+..++ ..+|+|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         283 DREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             cccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            122344678889999999999876556677  999999999999888 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=3.8e-29  Score=207.78  Aligned_cols=253  Identities=28%  Similarity=0.396  Sum_probs=212.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC   75 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~   75 (269)
                      .|++|+|.++|++++.+++||+|+++        |++++|+.++.+.++++ |++++.. +++++++++.+||+++....
T Consensus        63 ~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~  140 (325)
T cd08253          63 SDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPL-PDGVSFE-QGAALGIPALTAYRALFHRA  140 (325)
T ss_pred             cceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHh
Confidence            46889999999999999999999874        78999999999999999 8885444 57889999999999998778


Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi  154 (269)
                      ++.++++++|+|+++++|++++++++..|++|+++++++++.+.+. ++|++++++.... ++.+.+.+.+++ ++|+++
T Consensus       141 ~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         141 GAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVII  218 (325)
T ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEE
Confidence            9999999999999999999999999999999999999999999998 8999888888776 777778777665 899999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCe
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~  233 (269)
                      ||+|+......+++++++|+++.++....      ........++.++.++.+...... +....+.++.+.+++.++.+
T Consensus       219 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  292 (325)
T cd08253         219 EVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGAL  292 (325)
T ss_pred             ECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCc
Confidence            99999888889999999999999986431      112233345677777777654332 23445667788888999988


Q ss_pred             eeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ++.....+++++++++++.+.++...+|+++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         293 RPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             cCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            877778899999999999999988889999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.6e-29  Score=210.64  Aligned_cols=244  Identities=20%  Similarity=0.211  Sum_probs=193.6

Q ss_pred             cccceEEEEeccCCCC-CCCCCeEEec--------------------cceeeEEEecCCceeecCCCCCCcchhhhhcCC
Q 024337            4 ISGYGVAKVLDSENPE-FSKGDLVWGM--------------------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGM   62 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~   62 (269)
                      .|++|+|+++|++++. +++||+|+++                    |+|+||+.++.+.++++ |+++  +++.++++.
T Consensus        69 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~--s~~~a~~~~  145 (341)
T cd08262          69 HEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRV-PDGL--SMEDAALTE  145 (341)
T ss_pred             cceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEEC-CCCC--CHHHhhhhh
Confidence            4678999999999997 9999999975                    78999999999999999 8884  444445778


Q ss_pred             cchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEecCChhhHHH-
Q 024337           63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNA-  140 (269)
Q Consensus        63 ~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~-  140 (269)
                      ++.+||+++ ..++++++++|+|+|+ |++|.+++|+|+.+|++ +++++.++++.++++ ++|++++++++.. +..+ 
T Consensus       146 ~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~  221 (341)
T cd08262         146 PLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFAA  221 (341)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHHH
Confidence            889999996 6789999999999975 99999999999999996 667777888888888 8999888887653 3221 


Q ss_pred             --HHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccc
Q 024337          141 --ALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHL  216 (269)
Q Consensus       141 --~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (269)
                        .+.+..++ ++|+++||+|+ ..+..++++++++|+++.+|....     . ........+.++.++.+.....    
T Consensus       222 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~----  291 (341)
T cd08262         222 WAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCME-----S-DNIEPALAIRKELTLQFSLGYT----  291 (341)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC-----C-CccCHHHHhhcceEEEEEeccc----
Confidence              23344444 89999999998 578899999999999999986431     1 1111222245666666543322    


Q ss_pred             hHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          217 YPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       217 ~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                       .+.++.+++++.+|.+.+.  +.+.+++++++++++.+.+++..+|+|++
T Consensus       292 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         292 -PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             -HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence             4578889999999998753  45788999999999999999888999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.97  E-value=2.8e-29  Score=210.53  Aligned_cols=250  Identities=22%  Similarity=0.275  Sum_probs=202.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|+.+|++++.+++||+|+++                              |+|++|+.++.+.++++ |++++.
T Consensus        58 ~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-P~~~~~  136 (343)
T cd08236          58 HEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKI-PDHVDY  136 (343)
T ss_pred             cceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEEC-cCCCCH
Confidence            47889999999999999999999874                              78999999999999999 888443


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      . +++.+ ..+.+||+++. ..+++++++|+|+|+ |.+|.+++|+|+++|++ |+++++++++.+.++ ++|++.++++
T Consensus       137 ~-~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~  211 (343)
T cd08236         137 E-EAAMI-EPAAVALHAVR-LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINP  211 (343)
T ss_pred             H-HHHhc-chHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecC
Confidence            3 34555 67889999995 778999999999975 99999999999999996 999999999999987 8999888988


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      ++. . .+.+.+..++ ++|+++||.|. ..+..++++|+++|+++.+|.....   .......+..++.+++++.++..
T Consensus       212 ~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  286 (343)
T cd08236         212 KEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWN  286 (343)
T ss_pred             ccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEee
Confidence            876 6 6677777766 79999999986 6789999999999999999864320   00112234456678888888776


Q ss_pred             cccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhc-CCCcceEEE
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFS-GQNVGKQVV  264 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv  264 (269)
                      ........+.++.+.+++.++.+.  +.+...+++++++++++.+.+ ++..+|+|+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         287 SYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             ccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            433223456688889999999875  345577899999999999998 666788774

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>PRK10083 putative oxidoreductase; Provisional

Probab=99.97  E-value=3.4e-29  Score=209.69  Aligned_cols=245  Identities=17%  Similarity=0.157  Sum_probs=196.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEE---------------------------ec---cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVW---------------------------GM---TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~---------------------------~~---g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+.+|++++.+++||+|+                           ++   |+|+||+.++.+.++++ |+++  
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~--  135 (339)
T PRK10083         59 HEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRI-PDAI--  135 (339)
T ss_pred             cceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEEC-cCCC--
Confidence            367899999999999999999998                           33   78999999999999999 8884  


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKL-LGCY-VVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~-~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      +++.+++..++.++|+++ ..++++++++|+|+| +|++|++++|+|+. +|++ ++++++++++.+.++ ++|++.+++
T Consensus       136 ~~~~a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~  212 (339)
T PRK10083        136 ADQYAVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVIN  212 (339)
T ss_pred             CHHHHhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEec
Confidence            444455777888888655 668899999999999 59999999999996 6994 777888888999998 999999998


Q ss_pred             cCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          132 YKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      +++. ++.+.+... +.++|++|||+|. ..+..++++++++|+++.+|....      ....+...+..+++++.+...
T Consensus       213 ~~~~-~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~  284 (339)
T PRK10083        213 NAQE-PLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSRL  284 (339)
T ss_pred             Cccc-cHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEec
Confidence            8765 666666432 1257899999995 689999999999999999987431      112233444557777666543


Q ss_pred             cccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCC-CcceEEEEecC
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQ-NVGKQVVAVAP  268 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~~~  268 (269)
                            ..+.++.+++++.++.+.+  .+...|+++++++|++.+.++. ..+|+++++.+
T Consensus       285 ------~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        285 ------NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             ------ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence                  2456888999999999987  3667899999999999998654 56899998764

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.97  E-value=2.8e-29  Score=210.49  Aligned_cols=242  Identities=20%  Similarity=0.235  Sum_probs=197.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .+++|+|+++|++++.+++||+|++                               .|+|++|++++.+.++++ |++++
T Consensus        60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~  138 (343)
T cd05285          60 HESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKL-PDNVS  138 (343)
T ss_pred             cceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEEC-cCCCC
Confidence            4789999999999999999999985                               378999999999999999 99854


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      .. +++.+ .++.+||+++ ..++++++++++|+|+ |++|++++|+|+++|++ |+++++++++.++++ ++|++.+++
T Consensus       139 ~~-~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~  213 (343)
T cd05285         139 LE-EGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVN  213 (343)
T ss_pred             HH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEec
Confidence            43 34444 6788999997 7789999999999875 89999999999999997 899988999999998 899999998


Q ss_pred             cCChhhH---HHHHHHHCCC-CccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeee
Q 024337          132 YKEEADL---NAALKRYFPE-GIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME  206 (269)
Q Consensus       132 ~~~~~~~---~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (269)
                      +++. ++   .+.+.+.+++ ++|+++||.|+. .+..++++++++|+++.+|....      ....++.....+++.+.
T Consensus       214 ~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~  286 (343)
T cd05285         214 VRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP------EVTLPLSAASLREIDIR  286 (343)
T ss_pred             cccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHhhCCcEEE
Confidence            8765 53   7777777766 899999999984 88999999999999999886432      11223345566677766


Q ss_pred             eeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCC-CcceEEE
Q 024337          207 GFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQ-NVGKQVV  264 (269)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv  264 (269)
                      +....      .+.+..+++++.++.+.  +.+.+.++++++.++++.+.+++ ..+|+++
T Consensus       287 ~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         287 GVFRY------ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EeccC------hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            65432      25678889999999765  34556789999999999998875 4589987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.97  E-value=4.8e-29  Score=209.30  Aligned_cols=246  Identities=22%  Similarity=0.183  Sum_probs=202.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCC--ceeecCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAP--YLFKIQHTD   50 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~~~~~p~~   50 (269)
                      .|++|+|+++|++++.+++||+|+..                               |+|++|+.++.+  .++++ |++
T Consensus        60 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-p~~  138 (345)
T cd08286          60 HEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKL-PEG  138 (345)
T ss_pred             ccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEEC-CCC
Confidence            36899999999999999999999863                               789999999988  89999 888


Q ss_pred             CCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCcee
Q 024337           51 VPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEA  129 (269)
Q Consensus        51 ~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~  129 (269)
                      ++.. +++.++..+.+||.++....++.++++++|.|+ |++|.+++|+|+.+| .+|+++++++++.+.++ ++|++.+
T Consensus       139 ~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~  215 (345)
T cd08286         139 VDEE-AAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHT  215 (345)
T ss_pred             CCHH-HhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCce
Confidence            5433 477888999999998767788999999999876 999999999999999 69999888888888888 8999889


Q ss_pred             EecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeee
Q 024337          130 FNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG  207 (269)
Q Consensus       130 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (269)
                      +++++. ++...+.+.+++ ++|+++||+|. ..+..+++.++++|+++.+|....      ....++..++.+++++.+
T Consensus       216 v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~  288 (345)
T cd08286         216 VNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITT  288 (345)
T ss_pred             eccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEe
Confidence            998876 777777777766 89999999986 678889999999999999986421      123345555778888876


Q ss_pred             eeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCC--cceEEEEe
Q 024337          208 FIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQN--VGKQVVAV  266 (269)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~--~gkvvv~~  266 (269)
                      ....      .+.+..+.++++++.+++.  +.+++++++++++++.+.....  ..|+++++
T Consensus       289 ~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         289 GLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             ecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            4321      2467888899999988753  5678999999999999987532  35888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.97  E-value=3.3e-29  Score=207.94  Aligned_cols=252  Identities=28%  Similarity=0.412  Sum_probs=210.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .|++|+|.++|++++.+++||+|+++   |+|++|+.++.+.++++ |++++.. ++++++.++.++|+++.....+.++
T Consensus        63 ~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~  140 (323)
T cd05276          63 LEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAG  140 (323)
T ss_pred             ceeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCC
Confidence            46789999999999999999999987   79999999999999999 8884433 5778999999999999777889999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++.+.+.+...+ ++|+++||+|+
T Consensus       141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~  218 (323)
T cd05276         141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGG  218 (323)
T ss_pred             CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCch
Confidence            99999999999999999999999999999999999999997 8998888888776 777777777655 89999999998


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      ..+..++++++++|+++.++.....     ........++.+++++.++.....     +....+.+.++.+++.++.+.
T Consensus       219 ~~~~~~~~~~~~~g~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (323)
T cd05276         219 DYLARNLRALAPDGRLVLIGLLGGA-----KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIR  293 (323)
T ss_pred             HHHHHHHHhhccCCEEEEEecCCCC-----CCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCcc
Confidence            7788899999999999999864321     112334445578888888765442     122345567788899999988


Q ss_pred             eeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +.....|++++++++++.+.+++..+|+++
T Consensus       294 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         294 PVIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             CCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            777778999999999999998887788774

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=9e-29  Score=207.10  Aligned_cols=249  Identities=27%  Similarity=0.380  Sum_probs=210.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .|++|+|+++|++++.+++||+|++.                              |+|++|+.++.+.++++ |++++.
T Consensus        63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~-p~~~~~  141 (342)
T cd08266          63 SDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPI-PDNLSF  141 (342)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeC-CCCCCH
Confidence            46889999999999999999999874                              67999999999999999 887544


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . +++.++..+.++|+++.+..++.++++++|+|+++++|++++++++..|++|+.+++++++.+.++ .++.+.+++..
T Consensus       142 ~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~  219 (342)
T cd08266         142 E-EAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYR  219 (342)
T ss_pred             H-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecC
Confidence            3 577888889999999877788999999999999999999999999999999999999999999887 78887778777


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          134 EEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      +. ++.+.+.+.+.+ ++|++++++|...+..++++++++|+++.++.....     .........+.+++++.+.....
T Consensus       220 ~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  293 (342)
T cd08266         220 KE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT  293 (342)
T ss_pred             Ch-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC
Confidence            65 676777776655 899999999998889999999999999999875421     11233445677888888776543


Q ss_pred             cccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                           ...+..+++++.++.+.+.+...|++++++++++.+.++...+|+++++
T Consensus       294 -----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         294 -----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             -----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence                 4578888999999998887778899999999999999888788999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.97  E-value=7.8e-29  Score=206.21  Aligned_cols=248  Identities=27%  Similarity=0.393  Sum_probs=196.7

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC   75 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~   75 (269)
                      |++|+|..  ++++.|++||+|+++         |+|++|+.++.+.++++ |++++.. +++.++..+.++|.++....
T Consensus        63 e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~  138 (323)
T TIGR02823        63 DAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPL-PEGLSLR-EAMALGTAGFTAALSVMALE  138 (323)
T ss_pred             eeEEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhh
Confidence            56788777  567789999999875         79999999999999999 9885443 47788889999998875443


Q ss_pred             --cCCCCC-EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337           76 --SAKHGE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        76 --~~~~~~-~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                        ++.+++ +++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++.+++..+. +.  .++...++++|.
T Consensus       139 ~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~  214 (323)
T TIGR02823       139 RNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAG  214 (323)
T ss_pred             hcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceE
Confidence              388898 9999999999999999999999999999988999889997 8999888876543 32  444444447999


Q ss_pred             EEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCC
Q 024337          153 YFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       153 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g  231 (269)
                      ++||+|+..+..++++++++|+++.+|....     .....+...++.+++++.+...... .....+.+..+.+++.++
T Consensus       215 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (323)
T TIGR02823       215 AVDTVGGHTLANVLAQLKYGGAVAACGLAGG-----PDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPR  289 (323)
T ss_pred             EEECccHHHHHHHHHHhCCCCEEEEEcccCC-----CCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcC
Confidence            9999999888999999999999999987532     1112233455678888888765432 223344567777788888


Q ss_pred             CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .+.+. ...++++++++|++.+.+++..+|+++++
T Consensus       290 ~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       290 NLESI-TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             CCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            87654 45789999999999999998889999863

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=3.2e-29  Score=204.69  Aligned_cols=252  Identities=23%  Similarity=0.314  Sum_probs=205.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE   81 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~   81 (269)
                      .+++|.|.++|+++..+++||+|+++  |+|++|+.++.+.++++ |++++.. +++++++.+.++|.++.....+.+++
T Consensus        29 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~  106 (288)
T smart00829       29 GECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPI-PDGLSFE-EAATVPVVFLTAYYALVDLARLRPGE  106 (288)
T ss_pred             ceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEEC-CCCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCC
Confidence            57889999999999999999999996  79999999999999999 8885443 47788899999999987778899999


Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      +|+|+|++|++|++++++++.+|++|+++++++++.+.++ ++|+  +.++++... ++.+.+.+.+++ ++|.++|++|
T Consensus       107 ~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~  184 (288)
T smart00829      107 SVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLA  184 (288)
T ss_pred             EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCC
Confidence            9999999999999999999999999999999999999998 8998  678887776 777778777766 8999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCCCeee
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~  235 (269)
                      +..+..++++++++|+++.++.....    ......... +.+++++.+......   +....+.+..+++++.++.+.+
T Consensus       185 ~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (288)
T smart00829      185 GEFLDASLRCLAPGGRFVEIGKRDIR----DNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP  259 (288)
T ss_pred             HHHHHHHHHhccCCcEEEEEcCcCCc----cccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC
Confidence            88888999999999999999864310    011112222 455666655544221   1123455778889999998877


Q ss_pred             eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          236 VEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      ...+.+++++++++++.+.+++..+|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      260 LPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             cCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            65577899999999999998877778764

Enoylreductase in Polyketide synthases.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=4.3e-29  Score=208.85  Aligned_cols=240  Identities=21%  Similarity=0.219  Sum_probs=200.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK   45 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~   45 (269)
                      -|++|+|+.+|++++.+++||+|+.                                      .|+|+||+.++.+.+++
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~  138 (337)
T cd05283          59 HEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFK  138 (337)
T ss_pred             cceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEE
Confidence            4788999999999999999999962                                      27899999999999999


Q ss_pred             cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337           46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG  125 (269)
Q Consensus        46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g  125 (269)
                      + |++++.. +++.+++.+.+||+++.+ .+++++++++|.| .|++|++++++++.+|++|+++++++++.+.++ ++|
T Consensus       139 l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g  213 (337)
T cd05283         139 I-PEGLDSA-AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLG  213 (337)
T ss_pred             C-CCCCCHH-HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcC
Confidence            9 8885544 578899999999999855 4689999999977 599999999999999999999999999999998 899


Q ss_pred             CceeEecCChhhHHHHHHHHCCCCccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337          126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR  204 (269)
Q Consensus       126 ~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  204 (269)
                      ++.+++.... ++...    .++++|+++||+|.. .+..++++++++|+++.+|....      ....++..++.++++
T Consensus       214 ~~~vi~~~~~-~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~  282 (337)
T cd05283         214 ADEFIATKDP-EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE------PLPVPPFPLIFGRKS  282 (337)
T ss_pred             CcEEecCcch-hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC------CCccCHHHHhcCceE
Confidence            9888877654 33221    234799999999985 58999999999999999987432      113345566778999


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      +.++....     .+.++.+++++.++.+++.+ ..++++++++||+.+.+++..||+|++
T Consensus       283 i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         283 VAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             EEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            98877653     46788899999999988754 578999999999999999999998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.97  E-value=8.2e-29  Score=209.49  Aligned_cols=251  Identities=19%  Similarity=0.204  Sum_probs=196.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      .|++|+|+++|++++.+++||+|+.+                                                   |+|
T Consensus        66 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  145 (373)
T cd08299          66 HEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTF  145 (373)
T ss_pred             ccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcc
Confidence            57899999999999999999999753                                                   689


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||++++.++++++ |++++.. +++.+.+++.+||+++...++++++++|+|+|+ |++|++++++|+.+|+ +|++++
T Consensus       146 ~e~~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~  222 (373)
T cd08299         146 SEYTVVDEIAVAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVD  222 (373)
T ss_pred             cceEEecccceeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence            99999999999999 9885544 577888899999999877788999999999975 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhh-hcCCEEEEEeccccccCCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNM-KIRGRIAACGMISQYNLDK  188 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~  188 (269)
                      +++++.+.++ ++|++++++..+. .++.+.+.+.+++++|+++||+|. ..+..++..+ +++|+++.+|.....    
T Consensus       223 ~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----  297 (373)
T cd08299         223 INKDKFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----  297 (373)
T ss_pred             CCHHHHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----
Confidence            9999999998 8999888887653 026666766665689999999996 6777766655 578999999874320    


Q ss_pred             CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ........ .+.++.++.++....+.  ..+.+..+++.+.++.++  +.+.+.|++++++++++.+.+++. .|+++.+
T Consensus       298 ~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         298 QNLSINPM-LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             ceeecCHH-HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            11112222 34467788887765432  134555666666666443  446678999999999999887765 4777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=8.8e-29  Score=206.86  Aligned_cols=248  Identities=25%  Similarity=0.323  Sum_probs=211.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------cceeeEEEecCCceeecCCCCCCcchhhhh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------TGWEEYSLITAPYLFKIQHTDVPLSYYTGI   59 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~   59 (269)
                      .+++|+|+++|++++.+++||+|++.                        |+|++|+.++.+.++++ |++++.. +++.
T Consensus        63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~a~~  140 (336)
T cd08276          63 SDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRA-PDHLSFE-EAAT  140 (336)
T ss_pred             cceeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEEC-CCCCCHH-Hhhh
Confidence            46789999999999999999999874                        57999999999999999 8885443 5778


Q ss_pred             cCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCC-hhhH
Q 024337           60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EADL  138 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~-~~~~  138 (269)
                      ++.++.+||+++...++++++++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|.+.+++.+. . ++
T Consensus       141 ~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~  217 (336)
T cd08276         141 LPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DW  217 (336)
T ss_pred             hhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CH
Confidence            8899999999997778899999999996 599999999999999999999999999999998 789888888776 5 67


Q ss_pred             HHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccch
Q 024337          139 NAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLY  217 (269)
Q Consensus       139 ~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (269)
                      .+.+.+.+++ ++|+++||++...+..++++++++|+++.+|....     .........++.+++++.+.....     
T Consensus       218 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----  287 (336)
T cd08276         218 GEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSG-----FEAPVLLLPLLTKGATLRGIAVGS-----  287 (336)
T ss_pred             HHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCC-----CccCcCHHHHhhcceEEEEEecCc-----
Confidence            7788888776 89999999998888999999999999999987432     111234566778999998887643     


Q ss_pred             HHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          218 PKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       218 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .+.+..+++++.++.+.+.....+++++++++++.+.+++..+|+++++
T Consensus       288 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         288 RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            5678888999999988776667889999999999999888888998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=7.3e-29  Score=210.76  Aligned_cols=246  Identities=22%  Similarity=0.252  Sum_probs=198.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCC-
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVP-   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~-   52 (269)
                      .|++|+|+++|++++.+++||+|++                              .|+|++|+.++.+.++++ |++++ 
T Consensus        93 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~l-P~~~~~  171 (384)
T cd08265          93 HEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEI-NELREI  171 (384)
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEEC-Cccccc
Confidence            3688999999999999999999985                              378999999999999999 87531 


Q ss_pred             ----cchhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC
Q 024337           53 ----LSYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF  126 (269)
Q Consensus        53 ----~~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~  126 (269)
                          +.+++|+++.++.+||+++... ++++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++ ++|+
T Consensus       172 ~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~  249 (384)
T cd08265         172 YSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGA  249 (384)
T ss_pred             cccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCC
Confidence                3445778888999999999766 68999999999965 9999999999999999 7999998888888888 8999


Q ss_pred             ceeEecCC---hhhHHHHHHHHCCC-CccEEEeCCCc--hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh
Q 024337          127 DEAFNYKE---EADLNAALKRYFPE-GIDVYFENVGG--KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS  200 (269)
Q Consensus       127 ~~~~~~~~---~~~~~~~i~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  200 (269)
                      ++++++++   . ++.+.+.+.+++ ++|+++||.|.  ..+..++++++++|+++.+|....      .....+..+..
T Consensus       250 ~~~v~~~~~~~~-~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~  322 (384)
T cd08265         250 DYVFNPTKMRDC-LSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQV  322 (384)
T ss_pred             CEEEcccccccc-cHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhh
Confidence            88887763   2 566778888876 89999999996  477899999999999999986431      11223344555


Q ss_pred             cceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEE
Q 024337          201 KRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +..++.+.....    ....+.++++++.++.+.+.  +.+.|++++++++++.+.++ ..+|+++
T Consensus       323 ~~~~l~~~~~~~----~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         323 RRAQIVGAQGHS----GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             CceEEEEeeccC----CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            666777664321    23468889999999998763  55678999999999997665 5688876

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.2e-28  Score=205.79  Aligned_cols=243  Identities=27%  Similarity=0.335  Sum_probs=199.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|+.+|++++.+++||+|+++                              |+|++|++++...++++ |++++.
T Consensus        60 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~  138 (332)
T cd08259          60 HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKL-PDNVSD  138 (332)
T ss_pred             ccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEEC-CCCCCH
Confidence            47889999999999999999999874                              68999999999999999 888554


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . +++.+++++.+||+++.. +++.++++++|+|++|++|++++++++..|++|+++++++++.+.++ +++.+.+++..
T Consensus       139 ~-~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~  215 (332)
T cd08259         139 E-SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS  215 (332)
T ss_pred             H-HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH
Confidence            4 578889999999999966 88999999999999999999999999999999999999999888887 88887777543


Q ss_pred             ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337          134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH  213 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (269)
                         ++.+.+.+..  ++|++++|+|......++++++++|+++.++.....     ...........++.++.++..   
T Consensus       216 ---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~---  282 (332)
T cd08259         216 ---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD-----PAPLRPGLLILKEIRIIGSIS---  282 (332)
T ss_pred             ---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC-----CcCCCHHHHHhCCcEEEEecC---
Confidence               3444455433  699999999988889999999999999998764321     111122233346666665532   


Q ss_pred             ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                        ...+.++.+++++.++.+++.+...+++++++++++.+.+++..+|++++
T Consensus       283 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         283 --ATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             --CCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence              23567888999999999988777889999999999999998888898863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=6.8e-29  Score=203.06  Aligned_cols=252  Identities=23%  Similarity=0.329  Sum_probs=206.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE   81 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~   81 (269)
                      .+++|+|.++|++++.+++||+|+++  |+|+||+.++.+.++++ |++++.. +++.+++++.++|.++.+...+++++
T Consensus        33 ~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~  110 (293)
T cd05195          33 LECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGE  110 (293)
T ss_pred             eeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhheEeC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCC
Confidence            46789999999999999999999997  79999999999999999 8875443 46778899999999997778899999


Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--CceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG--FDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g--~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      +++|+|++|++|++++++++.+|++|+++++++++.+.++ .++  ++.+++.... ++.+.+.+.+.+ ++|.++||+|
T Consensus       111 ~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~  188 (293)
T cd05195         111 SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLS  188 (293)
T ss_pred             EEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCC
Confidence            9999999999999999999999999999999989999988 777  6778887776 788888887766 8999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHCCCee
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      +..+..++++++++|+++.++......    ..... ...+.+++++........    +....+.+..+.+++.++.++
T Consensus       189 ~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (293)
T cd05195         189 GELLRASWRCLAPFGRFVEIGKRDILS----NSKLG-MRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK  263 (293)
T ss_pred             chHHHHHHHhcccCceEEEeecccccc----CCccc-hhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence            988999999999999999998643210    01111 122445566665544332    223345678889999999998


Q ss_pred             eeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +.....+++++++++++.+.+++..+|+++
T Consensus       264 ~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         264 PLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            777778899999999999998887788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=2.2e-28  Score=203.60  Aligned_cols=254  Identities=26%  Similarity=0.344  Sum_probs=212.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC   75 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~   75 (269)
                      .+++|+|..+|++++.+++||+|+++        |+|++|+.++.+.++++ |++++.. ++++++.++.++|+++....
T Consensus        63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~  140 (328)
T cd08268          63 YEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKL-PDGLSFV-EAAALWMQYLTAYGALVELA  140 (328)
T ss_pred             cceEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc
Confidence            57889999999999999999999886        78999999999999999 8884433 47889999999999997778


Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi  154 (269)
                      .+.++++++|+|++|++|++++++++..|++++.+++++++.+.++ ++|.+.+++.+.. ++.+.+.+.+.+ ++|+++
T Consensus       141 ~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi  218 (328)
T cd08268         141 GLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVF  218 (328)
T ss_pred             CCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEE
Confidence            8999999999999999999999999999999999999999999997 8898888887775 777777777665 899999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCC
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g  231 (269)
                      +|.|+.....++++++++|+++.+|....     ..........+.+++++.+......   +......++.+.+++.++
T Consensus       219 ~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (328)
T cd08268         219 DPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASG  293 (328)
T ss_pred             ECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCC
Confidence            99999888899999999999999986432     1112333446788888888765432   233455677777888888


Q ss_pred             CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .+.+.....+++++++++++.+.+++..+|+++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         294 ALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             CCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88877667889999999999999888888998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.97  E-value=1.2e-28  Score=206.47  Aligned_cols=245  Identities=24%  Similarity=0.262  Sum_probs=196.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .|++|+|.++|++++.+++||+|++.                              |+|++|++++.+.++++ |+++  
T Consensus        63 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-P~~l--  139 (341)
T PRK05396         63 HEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKI-PDDI--  139 (341)
T ss_pred             eeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEEC-cCCC--
Confidence            46889999999999999999999873                              79999999999999999 8884  


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +++.+++..++.++++++..  ...++++|+|.|+ |++|++++|+|+++|+ +|++++.++++.++++ ++|+++++++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~  215 (341)
T PRK05396        140 PDDLAAIFDPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNV  215 (341)
T ss_pred             CHHHhHhhhHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecC
Confidence            43444455666777666532  3468999999875 9999999999999999 6888888888898888 8999999988


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      ++. ++.+.+.+.+++ ++|++|||.|+ ..+..++++++++|+++.+|....     . .......++.+++++.++..
T Consensus       216 ~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~l~~~~~  288 (341)
T PRK05396        216 AKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-----D-MAIDWNKVIFKGLTIKGIYG  288 (341)
T ss_pred             ccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-CcccHHHHhhcceEEEEEEc
Confidence            876 788888887765 89999999986 778999999999999999986432     1 11224566777888777642


Q ss_pred             cccccchHHHHHHHHHHHHCC-CeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          211 LDHYHLYPKFLEMIIPHIKEG-KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      ..    ..+.+..+++++.++ ++.+.+.+.+++++++++++.+.+++ .||++++++
T Consensus       289 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        289 RE----MFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             cC----ccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            21    123456677888888 45555667889999999999998877 799999864

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=1.6e-28  Score=204.04  Aligned_cols=254  Identities=26%  Similarity=0.376  Sum_probs=212.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .|++|.|..+|++++.+++||+|+++   |+|++|+.++.+.++++ |++++.. ++++++.++.++|+++....++.++
T Consensus        63 ~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~  140 (325)
T TIGR02824        63 LEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAG  140 (325)
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCC
Confidence            46789999999999999999999986   79999999999999999 8885433 4778999999999998778899999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++++|+|++|++|.+++++++.+|++|+++++++++.+.++ .+|.+.+++.... ++.+.+.+..++ ++|++++|+|+
T Consensus       141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~  218 (325)
T TIGR02824       141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGG  218 (325)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCch
Confidence            99999999999999999999999999999999999998887 8998878877765 777778777765 89999999998


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      ..+..++++++++|+++.++.....    . ...++..++.+++++.+......     +....+.+..+++++.++.+.
T Consensus       219 ~~~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  293 (325)
T TIGR02824       219 SYLNRNIKALALDGRIVQIGFQGGR----K-AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR  293 (325)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCC----c-CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc
Confidence            8888999999999999999874321    1 12344555688999988876442     112345567788899999888


Q ss_pred             eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.....+++++++++++.+.++...+|+++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       294 PVIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             CccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            76777889999999999999888888998863

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.97  E-value=1.8e-28  Score=207.84  Aligned_cols=250  Identities=20%  Similarity=0.185  Sum_probs=199.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe----------------------------------------ccceeeEEEecCC--
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------MTGWEEYSLITAP--   41 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--   41 (269)
                      .|++|+|+++|++++.+++||+|+.                                        .|+|+||+.++.+  
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~  138 (375)
T cd08282          59 HEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADF  138 (375)
T ss_pred             cccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccC
Confidence            4788999999999999999999975                                        1679999999976  


Q ss_pred             ceeecCCCCCCcch--hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 024337           42 YLFKIQHTDVPLSY--YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVD  118 (269)
Q Consensus        42 ~~~~~~p~~~~~~~--~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~  118 (269)
                      .++++ |++++...  .++++++++.++|+++ ..++++++++|+|.|+ |++|++++|+|+++|+ +|+++++++++.+
T Consensus       139 ~~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~  215 (375)
T cd08282         139 NLLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLD  215 (375)
T ss_pred             cEEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            89999 88854431  2577888999999999 7788999999999765 9999999999999998 8999988999999


Q ss_pred             HHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch------------hHhhhHhhhhcCCEEEEEeccccccC
Q 024337          119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK------------TLDAVLPNMKIRGRIAACGMISQYNL  186 (269)
Q Consensus       119 ~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~  186 (269)
                      .++ ++|+ ..+++++. ++.+.+.+.+++++|+++||+|+.            .+..++++++++|+++.+|.......
T Consensus       216 ~~~-~~g~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~  292 (375)
T cd08282         216 LAE-SIGA-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDP  292 (375)
T ss_pred             HHH-HcCC-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCccc
Confidence            998 8998 45677665 677777776656799999999975            38899999999999988876432111


Q ss_pred             CC-------CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCC
Q 024337          187 DK-------PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQ  257 (269)
Q Consensus       187 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~  257 (269)
                      ..       .....+...++.++..+.+...     ..++.++.+++++.++.+++.  +.+.+++++++++++.+.+++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~  367 (375)
T cd08282         293 GAGDAAAKQGELSFDFGLLWAKGLSFGTGQA-----PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL  367 (375)
T ss_pred             ccccccccCccccccHHHHHhcCcEEEEecC-----CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC
Confidence            00       0112234455566666555432     235678889999999999863  678899999999999999888


Q ss_pred             CcceEEEE
Q 024337          258 NVGKQVVA  265 (269)
Q Consensus       258 ~~gkvvv~  265 (269)
                       .+|+|+.
T Consensus       368 -~~kvvv~  374 (375)
T cd08282         368 -ETKVVIK  374 (375)
T ss_pred             -ceEEEeC
Confidence             8899875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.97  E-value=1.5e-28  Score=205.80  Aligned_cols=245  Identities=21%  Similarity=0.255  Sum_probs=198.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe---------------------------c---cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------M---TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------~---g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|.++|++++.+++||+|++                           +   |+|++|+.++.+.++++ |++++ 
T Consensus        61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~-  138 (340)
T TIGR00692        61 HEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN-PKSIP-  138 (340)
T ss_pred             cceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEEC-cCCCC-
Confidence            4688999999999999999999986                           2   78999999999999999 88844 


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                       +..++++.++.++++++  ...+.++++++|.|+ |++|.+++|+++.+|++ |+++.+++++.+.++ ++|++.++++
T Consensus       139 -~~~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~  213 (340)
T TIGR00692       139 -PEYATIQEPLGNAVHTV--LAGPISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNP  213 (340)
T ss_pred             -hHhhhhcchHHHHHHHH--HccCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEcc
Confidence             35667888889999887  345789999999765 99999999999999996 888877888888888 8999888888


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      ... ++.+.+.+.+++ ++|+++||+|+ ..+...+++++++|+++.+|.....     ........++.+++++.+...
T Consensus       214 ~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~  287 (340)
T TIGR00692       214 FKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-----VTIDFTNKVIFKGLTIYGITG  287 (340)
T ss_pred             ccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-----cccchhhhhhhcceEEEEEec
Confidence            776 788888887765 89999999886 6788999999999999999864211     111112245666777765442


Q ss_pred             cccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                          ....+.+..+++++.++.++  +.+...+++++++++++.+.+++. ||+++++
T Consensus       288 ----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       288 ----RHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             ----CCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence                12245678899999999886  446678899999999999988875 9999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.97  E-value=2.1e-28  Score=204.69  Aligned_cols=249  Identities=22%  Similarity=0.247  Sum_probs=203.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      .+++|+|..+|++++.+++||+|+.+      |+|++|+.++.++++++ |++++.. +++.++..+.++|+++...+++
T Consensus        65 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~  142 (336)
T cd08252          65 WDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGI  142 (336)
T ss_pred             cceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCC
Confidence            46789999999999999999999985      78999999999999999 8875444 4778899999999998777888


Q ss_pred             CC-----CCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           78 KH-----GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        78 ~~-----~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      .+     +++|+|+|++|++|++++++++.+| ++|+++++++++.+.++ ++|++++++...  ++.+.+....++++|
T Consensus       143 ~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d  219 (336)
T cd08252         143 SEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVD  219 (336)
T ss_pred             CCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCC
Confidence            87     9999999999999999999999999 89999999999999998 899988888764  555666544334899


Q ss_pred             EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-------ccchHHHHHH
Q 024337          152 VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-------YHLYPKFLEM  223 (269)
Q Consensus       152 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  223 (269)
                      +++||+|. ..+..++++++++|+++.+|...        .......++.+++++.+..+...       +....+.+++
T Consensus       220 ~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (336)
T cd08252         220 YIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNE  291 (336)
T ss_pred             EEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHH
Confidence            99999995 78999999999999999997631        11223334467788777654321       1123456888


Q ss_pred             HHHHHHCCCeeeeee---hccccccHHHHHHHHhcCCCcceEEEE
Q 024337          224 IIPHIKEGKLVYVED---MAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       224 ~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      +++++.++.+.+...   ..+++++++++++.+.++...+|++++
T Consensus       292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         292 VADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            999999999987533   347999999999999998888898863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.5e-28  Score=206.71  Aligned_cols=242  Identities=21%  Similarity=0.229  Sum_probs=195.6

Q ss_pred             cccceEEEEeccCCC--CCCCCCeEEe---------------------------c-----cceeeEEEecCC-ceeecCC
Q 024337            4 ISGYGVAKVLDSENP--EFSKGDLVWG---------------------------M-----TGWEEYSLITAP-YLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~--~~~~Gd~V~~---------------------------~-----g~~~~~~~v~~~-~~~~~~p   48 (269)
                      .|++|+|+++|++++  .+++||+|++                           +     |+|+||+.++.+ .++++ |
T Consensus        68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P  146 (350)
T cd08256          68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-P  146 (350)
T ss_pred             cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-C
Confidence            468999999999999  8999999986                           3     799999999988 57899 8


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      ++++.. .++.+ .++.++|+++ ..++++++++|+|.| +|++|++++++|+.+|+ .++++++++++.+.++ ++|++
T Consensus       147 ~~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~  221 (350)
T cd08256         147 DDIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGAD  221 (350)
T ss_pred             CCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCc
Confidence            884433 35555 8899999998 778999999999955 59999999999999998 4677788888888888 89998


Q ss_pred             eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHH-hhccee
Q 024337          128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYL-VSKRLR  204 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~  204 (269)
                      .++++.+. ++.+.+.+.+++ ++|+++||+|. ..+..++++++++|+++.+|....      .....+..+ ..++++
T Consensus       222 ~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~  294 (350)
T cd08256         222 VVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD------PVTVDWSIIGDRKELD  294 (350)
T ss_pred             EEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC------CCccChhHhhcccccE
Confidence            88888776 788888887776 89999999995 678899999999999999975321      111222222 245666


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEE
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +.++...      ...+.++++++.++.+++.  +.+.++++++++|++.+.+++..+|+++
T Consensus       295 i~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         295 VLGSHLG------PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EEEeccC------chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            6665543      2357788999999999873  5678999999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.97  E-value=2.9e-28  Score=204.09  Aligned_cols=240  Identities=21%  Similarity=0.264  Sum_probs=192.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-----------------------------------ccceeeEEEecCCceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-----------------------------------MTGWEEYSLITAPYLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~p   48 (269)
                      .|++|+|+++|++++.+++||+|++                                   .|+|+||++++.+.++++ |
T Consensus        59 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i-P  137 (339)
T cd08232          59 HEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPL-P  137 (339)
T ss_pred             ccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEEC-c
Confidence            4678999999999999999999986                                   278999999999999999 9


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      +++  +++.|+++.++.++|+++.....+ ++++|||.|+ |++|++++|+|+++|+ +|+++++++++.+.++ ++|++
T Consensus       138 ~~~--~~~~aa~~~~~~~a~~~l~~~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~  212 (339)
T cd08232         138 DGL--SLRRAALAEPLAVALHAVNRAGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGAD  212 (339)
T ss_pred             CCC--CHHHhhhcchHHHHHHHHHhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCC
Confidence            884  444445578888999998665556 9999999775 9999999999999999 8999998888888888 89998


Q ss_pred             eeEecCChhhHHHHHHHHC-C-CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337          128 EAFNYKEEADLNAALKRYF-P-EGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR  204 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~-~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  204 (269)
                      ++++++.. ++    .+.. . +++|+++||.|+ ..+...+++|+++|+++.++....      ........++.++++
T Consensus       213 ~vi~~~~~-~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~  281 (339)
T cd08232         213 ETVNLARD-PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELD  281 (339)
T ss_pred             EEEcCCch-hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceE
Confidence            88888764 42    2222 2 369999999996 678899999999999999876321      112233444667777


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.+...      ..+.++.+++++.++.+++  .+.+++++++++++++.+.+++..||+|+++
T Consensus       282 ~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         282 LRGSFR------FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             EEEEec------CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            766542      2456788899999998864  3567889999999999999888889999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.97  E-value=1.3e-29  Score=224.65  Aligned_cols=242  Identities=21%  Similarity=0.274  Sum_probs=207.1

Q ss_pred             CCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHH
Q 024337           20 FSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLV   96 (269)
Q Consensus        20 ~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~   96 (269)
                      -+-|.||+++   -++++.+.++.+++|.+ |.+-.+. ++++.|+.+.|+|++|..+++.++|++|||++|+||+|+++
T Consensus      1492 d~~GrRvM~mvpAksLATt~l~~rd~lWev-P~~WTle-eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAA 1569 (2376)
T KOG1202|consen 1492 DASGRRVMGMVPAKSLATTVLASRDFLWEV-PSKWTLE-EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAA 1569 (2376)
T ss_pred             cCCCcEEEEeeehhhhhhhhhcchhhhhhC-Ccccchh-hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHH
Confidence            5678899998   48999999999999999 9885555 68899999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---ceeEecCChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcC
Q 024337           97 GQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIR  172 (269)
Q Consensus        97 i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~  172 (269)
                      |.+|..+|++|+.+..|.++++++++.|.-   ...-|+++. +|.+.+.+.|.| |+|+|++....+.++.+++||..+
T Consensus      1570 IaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~ 1648 (2376)
T KOG1202|consen 1570 IAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALH 1648 (2376)
T ss_pred             HHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhc
Confidence            999999999999999999999999865543   456788887 999999999988 999999999999999999999999


Q ss_pred             CEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHC----CCeeeeeehccccccHHH
Q 024337          173 GRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKE----GKLVYVEDMAEGLESAPA  248 (269)
Q Consensus       173 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~  248 (269)
                      |||..+|...     ...-.......+.+|.+++|.-+-.+.+-..+.++++..++++    |.++|..+.+|+-+++++
T Consensus      1649 GRFLEIGKfD-----LSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~ 1723 (2376)
T KOG1202|consen 1649 GRFLEIGKFD-----LSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVED 1723 (2376)
T ss_pred             Ceeeeeccee-----cccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHH
Confidence            9999998743     1222222345678999999988766644445566666666655    688899999999999999


Q ss_pred             HHHHHhcCCCcceEEEEecCC
Q 024337          249 ALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       249 a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      ||+.|.+|+..||+|+++.+|
T Consensus      1724 AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1724 AFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred             HHHHHhccCccceEEEEEccc
Confidence            999999999999999987653

>cd05281 TDH Threonine dehydrogenase

Probab=99.97  E-value=3.1e-28  Score=204.04  Aligned_cols=244  Identities=23%  Similarity=0.266  Sum_probs=196.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|+.+|++++.+++||+|+++                              |+|++|++++.+.++++ |+++  
T Consensus        63 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~l-P~~~--  139 (341)
T cd05281          63 HEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKN-DKDI--  139 (341)
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEEC-cCCC--
Confidence            46789999999999999999999873                              78999999999999999 8884  


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +.++++++.++.++++++.  ....++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|+++++++
T Consensus       140 ~~~~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~  215 (341)
T cd05281         140 PPEIASIQEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINP  215 (341)
T ss_pred             CHHHhhhhhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCc
Confidence            4356678888889998874  45678999999875 9999999999999999 7999988888888888 8999888887


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      +.. ++. .+.+.+++ ++|++|||+|+ .....++++|+++|+++.+|....     ............++..+.+...
T Consensus       216 ~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~  288 (341)
T cd05281         216 REE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-----PVDIDLNNLVIFKGLTVQGITG  288 (341)
T ss_pred             ccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----CcccccchhhhccceEEEEEec
Confidence            765 677 77777766 99999999986 678899999999999999876432     1100111235556666665542


Q ss_pred             cccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .    ...+.+..+++++.++.+.  +.+...+++++++++++.+.+++ .||+++++
T Consensus       289 ~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         289 R----KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             C----CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            1    2234577889999999876  34556789999999999999988 89999864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.97  E-value=4.6e-28  Score=203.39  Aligned_cols=246  Identities=19%  Similarity=0.220  Sum_probs=200.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-c-----------------------------cceeeEEEecCC--ceeecCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-M-----------------------------TGWEEYSLITAP--YLFKIQHTDV   51 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~~~p~~~   51 (269)
                      .|++|+|+++|+++..+++||+|++ +                             |+|+||+.++.+  .++++ |+++
T Consensus        59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P~~l  137 (345)
T cd08287          59 HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKV-PGSP  137 (345)
T ss_pred             cceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEEC-CCCC
Confidence            4788999999999999999999986 1                             789999999975  99999 9885


Q ss_pred             Ccchh----hhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCC
Q 024337           52 PLSYY----TGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGF  126 (269)
Q Consensus        52 ~~~~~----~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~  126 (269)
                      +....    .+++...+.+||+++ ..++++++++++|.| +|++|++++|+|+++|++ ++++++++++.+.++ ++|+
T Consensus       138 ~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga  214 (345)
T cd08287         138 SDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGA  214 (345)
T ss_pred             ChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC
Confidence            54111    124557789999998 467899999999976 599999999999999995 888888888888888 8999


Q ss_pred             ceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337          127 DEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR  204 (269)
Q Consensus       127 ~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  204 (269)
                      ++++++... ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.++....      ....+....+.++++
T Consensus       215 ~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~  287 (345)
T cd08287         215 TDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNVG  287 (345)
T ss_pred             ceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcceE
Confidence            999999876 778888887766 89999999986 788999999999999999876431      122334456788888


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.+...     ...+.++.+++++.++.+++  .+...+++++++++++.+.+++.. |++|++
T Consensus       288 ~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~  345 (345)
T cd08287         288 LAGGPA-----PVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP  345 (345)
T ss_pred             EEEecC-----CcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence            877432     23567899999999999886  355778999999999998877654 988853

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.9e-28  Score=202.94  Aligned_cols=235  Identities=28%  Similarity=0.333  Sum_probs=190.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++++.+++||+|+++                              |+|++|+.++.+.++++ |++++.
T Consensus        60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~  138 (325)
T cd08264          60 AEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKI-PDSISD  138 (325)
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeC-CCCCCH
Confidence            36889999999999999999999863                              78999999999999999 988554


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . +++.+++++.+||+++.. ++++++++++|+|++|++|++++++|+.+|++|+++++    .+.++ ++|++++++.+
T Consensus       139 ~-~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~  211 (325)
T cd08264         139 E-LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYD  211 (325)
T ss_pred             H-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecch
Confidence            4 578889999999999954 88999999999999999999999999999999998873    36666 89998888765


Q ss_pred             ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337          134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH  213 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (269)
                      +   ..+.+++.+ +++|+++||+|...+..++++++++|+++.+|....     .....++..++.++.++.+..... 
T Consensus       212 ~---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-  281 (325)
T cd08264         212 E---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT-  281 (325)
T ss_pred             H---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC-
Confidence            3   345566555 679999999999889999999999999999986321     112344556666777777764432 


Q ss_pred             ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceE
Q 024337          214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQ  262 (269)
Q Consensus       214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv  262 (269)
                          ++.++.+++++.+..  ..+.+.|++++++++++.+.+++..+|+
T Consensus       282 ----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         282 ----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             ----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence                466788888886544  4456789999999999999987776665

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=4.9e-28  Score=203.70  Aligned_cols=258  Identities=21%  Similarity=0.200  Sum_probs=192.2

Q ss_pred             cccceEEEEeccCCC-CCCCCCeEEec--------cceeeEEEecCC----ceeecCCCCCCcchhhhhcCCcchhHHHH
Q 024337            4 ISGYGVAKVLDSENP-EFSKGDLVWGM--------TGWEEYSLITAP----YLFKIQHTDVPLSYYTGILGMPGMTAYVG   70 (269)
Q Consensus         4 i~~~G~v~~vg~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~~~~~p~~~~~~~~~a~l~~~~~~a~~~   70 (269)
                      .|++|+|.++|++++ .+++||+|+++        |+|++|+.++..    .++++ |++++.. +++.++..+.+||++
T Consensus        64 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~  141 (352)
T cd08247          64 RDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRK-PENISLE-EAAAWPLVLGTAYQI  141 (352)
T ss_pred             ceeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEEC-CCCCCHH-HHHHhHHHHHHHHHH
Confidence            467899999999998 89999999975        789999999998    78999 8885544 577889999999999


Q ss_pred             HHHhh-cCCCCCEEEEecCcchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhh---HHHHH-H
Q 024337           71 FYEVC-SAKHGECVFISAASGAVGQLVGQFAKLL-GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD---LNAAL-K  143 (269)
Q Consensus        71 l~~~~-~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~---~~~~i-~  143 (269)
                      +...+ +++++++++|+|+++++|++++++|+.+ |. .++++. ++++.++++ ++|++.++++++. +   +...+ +
T Consensus       142 l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~  218 (352)
T cd08247         142 LEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLE  218 (352)
T ss_pred             HHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHHH
Confidence            97766 7999999999999999999999999987 55 677776 566667777 8999888887765 4   44444 4


Q ss_pred             HHCCC-CccEEEeCCCc-hhHhhhHhhhh---cCCEEEEEeccccccCCCCC-----CccchHHHhhcceeeeeeeeccc
Q 024337          144 RYFPE-GIDVYFENVGG-KTLDAVLPNMK---IRGRIAACGMISQYNLDKPE-----GVHNLMYLVSKRLRMEGFIVLDH  213 (269)
Q Consensus       144 ~~~~~-~~d~vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  213 (269)
                      ..+++ ++|++|||+|+ .....++++++   ++|+++.++...........     ........+.+++++........
T Consensus       219 ~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (352)
T cd08247         219 NVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFF  298 (352)
T ss_pred             hhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEE
Confidence            44424 89999999998 68888999999   99999987532110000000     00000111222322222211110


Q ss_pred             -ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          214 -YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       214 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                       .....+.+..+++++.++.+++.+.+.+++++++++++.+.+++..||+++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         299 LLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             EecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence             00114678889999999999887778899999999999999988889999863

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.5e-27  Score=198.51  Aligned_cols=248  Identities=27%  Similarity=0.376  Sum_probs=205.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC   75 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~   75 (269)
                      .+++|+|..+|++++.+++||+|+++        |+|++|+.++.+.++++ |++++.. .++.++..+.+||+++.+..
T Consensus        63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~  140 (326)
T cd08272          63 CDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALK-PANLSMR-EAAALPLVGITAWEGLVDRA  140 (326)
T ss_pred             cceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhc
Confidence            46789999999999999999999985        68999999999999999 8885443 47788889999999987888


Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi  154 (269)
                      +++++++++|+|+++++|++++++++.+|++|+.++++ ++.+.++ ++|++.+++...  .+.+.+.+.+++ ++|.++
T Consensus       141 ~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~  216 (326)
T cd08272         141 AVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVF  216 (326)
T ss_pred             CCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEE
Confidence            99999999999999999999999999999999999987 8888887 899988887655  366667777766 899999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc--c----ccchHHHHHHHHHHH
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD--H----YHLYPKFLEMIIPHI  228 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~  228 (269)
                      ||.|+.....++++++++|+++.++...         .........+++++.+.....  .    +....+.+..+++++
T Consensus       217 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  287 (326)
T cd08272         217 DTVGGETLDASFEAVALYGRVVSILGGA---------THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLV  287 (326)
T ss_pred             ECCChHHHHHHHHHhccCCEEEEEecCC---------ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHH
Confidence            9999988888999999999999987632         111122336677777665432  1    223456788899999


Q ss_pred             HCCCeeeeee-hccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          229 KEGKLVYVED-MAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       229 ~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .++.+.+.+. ..+++++++++++.+.+++..+|+++++
T Consensus       288 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         288 ERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            9999887655 7899999999999998888788999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=1.3e-27  Score=198.39  Aligned_cols=253  Identities=26%  Similarity=0.353  Sum_probs=210.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .+++|.|..+|++++.+++||+|+++   |++++|+.++.+.++++ |++++.. +++++..++.+||+++....++.++
T Consensus        63 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~  140 (323)
T cd08241          63 SEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPG  140 (323)
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCC
Confidence            36789999999999999999999986   68999999999999999 8885443 4677899999999999777889999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++++|+|++|++|++++++++..|++|+.+++++++.+.++ ++|++.+++.... ++.+.+.+.+++ ++|.++||+|+
T Consensus       141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~  218 (323)
T cd08241         141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGG  218 (323)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccH
Confidence            99999999999999999999999999999999999999998 8998888887775 777888887766 89999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc----cchHHHHHHHHHHHHCCCeee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY----HLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~  235 (269)
                      .....++++++++|+++.++....     ..........+.+++++.+.....+.    ....+.+..+++++.++.+.+
T Consensus       219 ~~~~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (323)
T cd08241         219 DVFEASLRSLAWGGRLLVIGFASG-----EIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP  293 (323)
T ss_pred             HHHHHHHHhhccCCEEEEEccCCC-----CcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc
Confidence            888899999999999999886321     11112233456688888887654431    123466788899999998887


Q ss_pred             eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          236 VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      .....|+++++.++++.+.++...+|++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         294 HVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            777788999999999999888878888863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=6.7e-28  Score=201.21  Aligned_cols=251  Identities=25%  Similarity=0.288  Sum_probs=195.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .+++|+|+.+|++++.+++||+|+++   |+|++|+.++.+.++++ |++++.. +++.++.++.++|+++.+.+++.++
T Consensus        63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g  140 (331)
T cd08273          63 YDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTG  140 (331)
T ss_pred             cceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCC
Confidence            46789999999999999999999986   89999999999999999 8885544 5778999999999999777889999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      ++++|+|++|++|++++++++..|++|+.++. +++.+.++ ++|+.. ++.... ++...  +..++++|.++||+|+.
T Consensus       141 ~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~  214 (331)
T cd08273         141 QRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGE  214 (331)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchH
Confidence            99999999999999999999999999999996 88888887 888653 454443 44433  33344899999999997


Q ss_pred             hHhhhHhhhhcCCEEEEEeccccccCCCCCCccch------------HHHhhcceeeeeeeeccc--ccchHHHHHHHHH
Q 024337          161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------------MYLVSKRLRMEGFIVLDH--YHLYPKFLEMIIP  226 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  226 (269)
                      ....++++++++|+++.+|........  .....+            ...+.+++++.+......  +....+.+..+++
T Consensus       215 ~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  292 (331)
T cd08273         215 SYEESYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLD  292 (331)
T ss_pred             HHHHHHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHH
Confidence            789999999999999999875421100  000000            111223333333322110  2234577889999


Q ss_pred             HHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          227 HIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       227 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      ++.++.+.+.+...+++++++++++.+.+++..||+|+
T Consensus       293 ~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         293 LLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            99999998777778999999999999998888888886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.96  E-value=1.9e-27  Score=198.81  Aligned_cols=242  Identities=28%  Similarity=0.364  Sum_probs=193.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      .+++|+|+.+|++++.+++||+|++                              .|+|++|+.++.+.++++ |++++.
T Consensus        58 ~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~~  136 (334)
T cd08234          58 HEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKI-PDNLSF  136 (334)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEEC-cCCCCH
Confidence            4688999999999999999999986                              278999999999999999 988554


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      . +++ +...+.++++++ ..++++++++|+|+|+ |++|.+++++|+.+|++ |+++++++++.+.++ ++|++.++++
T Consensus       137 ~-~aa-~~~~~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~  211 (334)
T cd08234         137 E-EAA-LAEPLSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDP  211 (334)
T ss_pred             H-HHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecC
Confidence            3 344 447788999998 7789999999999975 99999999999999997 888998999999997 8999888887


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      .+. ++... +...++++|+++||+|. ..+..++++++++|+++.+|....    ..........++.+++++.+... 
T Consensus       212 ~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~-  284 (334)
T cd08234         212 SRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAP----DARVSISPFEIFQKELTIIGSFI-  284 (334)
T ss_pred             CCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCC----CCCcccCHHHHHhCCcEEEEecc-
Confidence            765 55444 33333489999999985 788899999999999999987432    01112233344557777776543 


Q ss_pred             ccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEE
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                           ..+.++.+++++.++.+.+.  +...+++++++++++.+.+ +..+|+++
T Consensus       285 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         285 -----NPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             -----CHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence                 24568889999999988742  5567899999999999998 77789886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.96  E-value=2.1e-27  Score=200.63  Aligned_cols=243  Identities=20%  Similarity=0.235  Sum_probs=191.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .|++|+|+++|++++.|++||+|++                               .|+|+||++++.+.++++ |++  
T Consensus        79 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~-P~~--  155 (364)
T PLN02702         79 HECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL-PEN--  155 (364)
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEEC-CCC--
Confidence            5789999999999999999999986                               378999999999999999 888  


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      ++++.+++..++.++|+++ ...++.++++++|+|+ |++|++++++++.+|++ |+++++++++.+.++ ++|++.+++
T Consensus       156 l~~~~aa~~~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~  232 (364)
T PLN02702        156 VSLEEGAMCEPLSVGVHAC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVL  232 (364)
T ss_pred             CCHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEe
Confidence            4444444444556688887 6788999999999975 99999999999999994 777887888888888 899988766


Q ss_pred             cC--ChhhHHHHHHHH---CCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337          132 YK--EEADLNAALKRY---FPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM  205 (269)
Q Consensus       132 ~~--~~~~~~~~i~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (269)
                      +.  +. ++.+.+.+.   +++++|++|||+|+ ..+..++++++++|+++.+|....      ...........+++++
T Consensus       233 ~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i  305 (364)
T PLN02702        233 VSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN------EMTVPLTPAAAREVDV  305 (364)
T ss_pred             cCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CCcccHHHHHhCccEE
Confidence            43  23 565665543   33489999999995 789999999999999999986421      1123445567788888


Q ss_pred             eeeeecccccchHHHHHHHHHHHHCCCee--eeeehcccc--ccHHHHHHHHhcCCCcceEEEE
Q 024337          206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGL--ESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      .+++..      ...++.++++++++.+.  +.+.+.|++  +++++|++.+.+++..+|+++.
T Consensus       306 ~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        306 VGVFRY------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             EEeccC------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            876542      24678889999999875  335566554  7999999999988888899985

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=1.1e-27  Score=195.10  Aligned_cols=241  Identities=24%  Similarity=0.258  Sum_probs=189.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEE
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECV   83 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~v   83 (269)
                      .|++|+|.++|++++.+++||+|++++.|++|+.++.+.++++ |++++.. +++.+ +++.+||+++. .+++++++++
T Consensus        26 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~~~~i-p~~l~~~-~aa~~-~~~~ta~~~~~-~~~~~~g~~v  101 (277)
T cd08255          26 YSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVPL-PDGLPPE-RAALT-ALAATALNGVR-DAEPRLGERV  101 (277)
T ss_pred             cceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHHeeEC-cCCCCHH-HhHHH-HHHHHHHHHHH-hcCCCCCCEE
Confidence            5788999999999999999999999999999999999999999 8885443 45556 78999999984 6889999999


Q ss_pred             EEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcC-CceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-h
Q 024337           84 FISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFG-FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-K  160 (269)
Q Consensus        84 lI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g-~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~  160 (269)
                      +|+|+ |++|++++++|+++|++ |+++++++++.+.++ ++| .+.+++....        ...+.++|++|||++. .
T Consensus       102 lI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--------~~~~~~~d~vl~~~~~~~  171 (277)
T cd08255         102 AVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD--------EIGGRGADVVIEASGSPS  171 (277)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh--------hhcCCCCCEEEEccCChH
Confidence            99975 99999999999999998 999999999999888 888 4444433221        1122389999999885 7


Q ss_pred             hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc-------cchHHHHHHHHHHHHCCCe
Q 024337          161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-------HLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~  233 (269)
                      .+..++++++++|+++.+|....     . .......+..+.+++.+.......       ....+.++++++++.++.+
T Consensus       172 ~~~~~~~~l~~~g~~~~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l  245 (277)
T cd08255         172 ALETALRLLRDRGRVVLVGWYGL-----K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL  245 (277)
T ss_pred             HHHHHHHHhcCCcEEEEEeccCC-----C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCc
Confidence            88899999999999999987432     1 111122344456677666554321       1224678899999999998


Q ss_pred             eeeeehccccccHHHHHHHHhcC-CCcceEEE
Q 024337          234 VYVEDMAEGLESAPAALIGLFSG-QNVGKQVV  264 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv  264 (269)
                      ++.+.+.+++++++++++.+.++ ....|+++
T Consensus       246 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         246 EALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            87777889999999999999877 33456653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.96  E-value=4.5e-27  Score=195.71  Aligned_cols=249  Identities=22%  Similarity=0.298  Sum_probs=196.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHH-
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE-   73 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~-   73 (269)
                      -|++|+|+.  ++++.+++||+|+++         |+|++|+.++.+.++++ |++++.. +++.++..+++++.++.. 
T Consensus        63 ~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~  138 (324)
T cd08288          63 IDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPL-PEGLSAR-QAMAIGTAGFTAMLCVMAL  138 (324)
T ss_pred             cceEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHH
Confidence            356788777  777889999999974         78999999999999999 9885443 477888888999877641 


Q ss_pred             -hhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           74 -VCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        74 -~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                       ..+.. ++++++|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|+++++++++. .  ..+...+++++|
T Consensus       139 ~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~  214 (324)
T cd08288         139 EDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWA  214 (324)
T ss_pred             hhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCccc
Confidence             23445 6789999999999999999999999999999999999999997 9999888887653 2  245555555799


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHC
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE  230 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  230 (269)
                      .++|++|+..+..++..++.+|+++.+|....     ......+..++.+++++.+...... .....+.++.+.+++.+
T Consensus       215 ~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (324)
T cd08288         215 GAVDTVGGHTLANVLAQTRYGGAVAACGLAGG-----ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDP  289 (324)
T ss_pred             EEEECCcHHHHHHHHHHhcCCCEEEEEEecCC-----CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhc
Confidence            99999998777788888999999999987421     1111233445578899888764332 22345677888888889


Q ss_pred             CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.+.+ +...+++++++++++.+.+++..+|+++++
T Consensus       290 ~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         290 ALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             CCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            88876 457889999999999999999889999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.96  E-value=4.3e-27  Score=196.23  Aligned_cols=234  Identities=21%  Similarity=0.178  Sum_probs=190.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .|++|+|+.+|++++.+++||+|+.                               .|+|++|+.++.+.++++ |++++
T Consensus        64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~  142 (329)
T cd08298          64 HEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPI-PEDYD  142 (329)
T ss_pred             ccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEEC-CCCCC
Confidence            4789999999999999999999975                               378999999999999999 98854


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .. +++++++++.+||+++ ..++++++++++|+|+ |++|+++++++++.|++|+++++++++.+.++ ++|++.+++.
T Consensus       143 ~~-~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~  218 (329)
T cd08298         143 DE-EAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDS  218 (329)
T ss_pred             HH-HhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEecc
Confidence            44 5789999999999999 7899999999999975 99999999999999999999999999999997 8999877766


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      ..  .        .+.++|+++++.+. ..+..++++++++|+++.++....     ......... +.++..+.+....
T Consensus       219 ~~--~--------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~~  282 (329)
T cd08298         219 DD--L--------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVANL  282 (329)
T ss_pred             Cc--c--------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecCC
Confidence            53  1        12379999998764 788999999999999998874221     111122222 3455555554322


Q ss_pred             ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                           ..+.++.+++++.++.+++. .+.|+++++++|++.+.+++..||+++
T Consensus       283 -----~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         283 -----TRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             -----CHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence                 25668889999999988874 467899999999999999988898874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.96  E-value=3.9e-27  Score=196.58  Aligned_cols=240  Identities=25%  Similarity=0.288  Sum_probs=195.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEE----------------------------ec---cceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVW----------------------------GM---TGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~----------------------------~~---g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .|++|+|..+|++++.+++||+|+                            ++   |+|++|+.++.+.++++ |++++
T Consensus        59 ~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~  137 (330)
T cd08245          59 HEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLL-PDGLP  137 (330)
T ss_pred             ccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEEC-CCCCC
Confidence            478999999999999999999997                            32   78999999999999999 88854


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .. +++.+++.+.+||+++.. .+++++++|+|+|+ |++|++++++|+.+|++|+++++++++.+.++ ++|++.+++.
T Consensus       138 ~~-~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~  213 (330)
T cd08245         138 LA-QAAPLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDS  213 (330)
T ss_pred             HH-HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEecc
Confidence            44 577889999999999955 78999999999976 77999999999999999999999999999997 8998888876


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      ... +....    ..+++|+++||++. .....++++++++|+++.++....     .........++.++.++.++...
T Consensus       214 ~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  283 (330)
T cd08245         214 GAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPES-----PPFSPDIFPLIMKRQSIAGSTHG  283 (330)
T ss_pred             CCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCC-----CccccchHHHHhCCCEEEEeccC
Confidence            653 33222    22479999999885 788899999999999999976432     11112234466777777776553


Q ss_pred             ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      .     .+.++.+++++.++.+.+ ....+++++++++++.+.+++..+|+++
T Consensus       284 ~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         284 G-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             C-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            2     467888899999998876 3467899999999999999988888875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=9e-27  Score=193.80  Aligned_cols=249  Identities=22%  Similarity=0.344  Sum_probs=202.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      .+++|.|+.+|++++.+++||+|+++      |+|++|+.++.+.++++ |++++.. .++.+.+.+.++++++.+.+++
T Consensus        62 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~  139 (325)
T cd08271          62 VDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRI  139 (325)
T ss_pred             cceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCC
Confidence            46789999999999999999999985      68999999999999999 8885444 5778999999999999888889


Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~  156 (269)
                      .++++++|+|+++++|++++++++..|++|+++. ++++.+.+. .+|++.+++.... ++...+.+..++ ++|.+++|
T Consensus       140 ~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~  216 (325)
T cd08271         140 EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDT  216 (325)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEEC
Confidence            9999999999999999999999999999999888 777888887 8999888887775 677778877766 89999999


Q ss_pred             CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----c----cchHHHHHHHHHHH
Q 024337          157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----Y----HLYPKFLEMIIPHI  228 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~  228 (269)
                      +++.....++++++++|+++.++....     . .   ....+.+++.+....+...    +    ....+.+..+++++
T Consensus       217 ~~~~~~~~~~~~l~~~G~~v~~~~~~~-----~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
T cd08271         217 VGGETAAALAPTLAFNGHLVCIQGRPD-----A-S---PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELL  287 (325)
T ss_pred             CCcHhHHHHHHhhccCCEEEEEcCCCC-----C-c---chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHH
Confidence            998777789999999999999865321     0 0   1122334444443332211    1    23445678888999


Q ss_pred             HCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          229 KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       229 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .++.+.+.....++++++.++++.+.+++..+|+++++
T Consensus       288 ~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         288 AAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            99999876667889999999999999888888998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.96  E-value=1.6e-27  Score=200.43  Aligned_cols=253  Identities=26%  Similarity=0.353  Sum_probs=192.1

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      |++|+|..+|++++.+++||+|+++      |+|++|+.++.+.++++ |++++.. .++.+++.+.++|+++.+.+.+.
T Consensus        80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~  157 (350)
T cd08248          80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKK-PKNLSHE-EAASLPYAGLTAWSALVNVGGLN  157 (350)
T ss_pred             eeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecC-CCCCCHH-HHhhchhHHHHHHHHHHHhccCC
Confidence            6789999999999999999999884      89999999999999999 9885443 57789999999999997777775


Q ss_pred             C----CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           79 H----GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        79 ~----~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +    +++++|+|++|++|++++++++.+|++|+++.++ ++.+.++ ++|.+.+++..+. ++.+.+...  +++|+++
T Consensus       158 ~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~~vd~vi  232 (350)
T cd08248         158 PKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--GKFDVIL  232 (350)
T ss_pred             CccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--CCCCEEE
Confidence            4    9999999999999999999999999999998855 5777777 8999888887765 555555432  3799999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCC-CC--Ccc-chHHHhhccee-ee-eeee-cccccchHHHHHHHHHH
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDK-PE--GVH-NLMYLVSKRLR-ME-GFIV-LDHYHLYPKFLEMIIPH  227 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~-~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~  227 (269)
                      ||+|+.....++++++++|+++.++......... ..  ... ....+...... +. .... +.......+.+..++++
T Consensus       233 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (350)
T cd08248         233 DTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKL  312 (350)
T ss_pred             ECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHH
Confidence            9999888899999999999999997643110000 00  000 00011111110 00 0000 00011236678999999


Q ss_pred             HHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          228 IKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +.++.+.+.+...+++++++++++.+.+++..+|+++
T Consensus       313 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         313 VEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             HhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence            9999998777788999999999999998887788876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.1e-26  Score=194.19  Aligned_cols=258  Identities=25%  Similarity=0.389  Sum_probs=205.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      .+++|+|..+|++++++++||+|+++   |+|++|+.++.+.++++ |++++.. +++.++.++.++|+++....+++++
T Consensus        62 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~  139 (337)
T cd08275          62 FECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPG  139 (337)
T ss_pred             ceeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCC
Confidence            47889999999999999999999997   78999999999999999 8875443 4678889999999999888899999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      ++|+|+|++|++|++++++|+.. +..++... .+++.+.++ .+|++.+++.... ++.+.+.+.+++++|+++||+|+
T Consensus       140 ~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~  216 (337)
T cd08275         140 QSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGG  216 (337)
T ss_pred             CEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcH
Confidence            99999999999999999999998 44433332 455778887 8999888888776 77777877765589999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCC-C----------CCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHH
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDK-P----------EGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMII  225 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  225 (269)
                      .....++++++++|+++.+|.....+... .          .....+..++.+++++.++.....   .......+..++
T Consensus       217 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (337)
T cd08275         217 EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLL  296 (337)
T ss_pred             HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHH
Confidence            88889999999999999998643210000 0          011222456788888888765432   112234578888


Q ss_pred             HHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          226 PHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       226 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +++.++.+.+.....|++++++++++.+.+++..+|+++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         297 KLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            99999998877777899999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=7.8e-27  Score=193.86  Aligned_cols=231  Identities=19%  Similarity=0.178  Sum_probs=182.5

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDV   51 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~   51 (269)
                      ..|++|+|+++|++   +++||+|.+                               .|+|++|+.++.++++++ |+++
T Consensus        55 G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~  130 (319)
T cd08242          55 GHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVV-PDLV  130 (319)
T ss_pred             CceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEEC-cCCC
Confidence            35789999999988   679999862                               268999999999999999 8884


Q ss_pred             CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      +  .+.+++..+..++|.++ +..+++++++|+|+| +|++|++++|+|+.+|++|++++.++++.+.++ ++|++.+++
T Consensus       131 ~--~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~  205 (319)
T cd08242         131 P--DEQAVFAEPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLP  205 (319)
T ss_pred             C--HHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeC
Confidence            4  33333335555666655 678899999999997 599999999999999999999999999999999 799987776


Q ss_pred             cCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          132 YKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      ++.  .       ..++++|+++||+|+ ..+..++++++++|+++..+....      ....+...++.++.++.+...
T Consensus       206 ~~~--~-------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~  270 (319)
T cd08242         206 DEA--E-------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRC  270 (319)
T ss_pred             ccc--c-------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEec
Confidence            543  1       122389999999987 678899999999999998655321      122345566778888877654


Q ss_pred             cccccchHHHHHHHHHHHHCCCe--eeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ..        ++.+++++.++.+  .+.+.+.|++++++++++.+.++. .+|+++++
T Consensus       271 ~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         271 GP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             cc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            32        6778899999998  455778899999999999998776 47998863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.3e-26  Score=192.27  Aligned_cols=245  Identities=29%  Similarity=0.330  Sum_probs=188.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      .|++|.|.++|++++.+++||+|+++      |+|++|+.++.+.++++ |++++.. .++.+++++.+||+++....++
T Consensus        64 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~  141 (319)
T cd08267          64 MDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKV  141 (319)
T ss_pred             ceeeEEEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCC
Confidence            36789999999999999999999875      78999999999999999 8885444 5788999999999999777779


Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~  156 (269)
                      +++++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|++++++.... ++.   ...+.+ ++|+++||
T Consensus       142 ~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~  215 (319)
T cd08267         142 KPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDA  215 (319)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEEC
Confidence            999999999999999999999999999999999855 8888887 8999888877654 443   333444 89999999


Q ss_pred             CCc--hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc--hHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCC
Q 024337          157 VGG--KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN--LMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       157 ~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      +|+  ......+..++++|+++.+|......    .....  ..........+......  +  ..+.+..+++++.++.
T Consensus       216 ~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~~  287 (319)
T cd08267         216 VGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLTLGGGGRRLKFFLAK--P--NAEDLEQLAELVEEGK  287 (319)
T ss_pred             CCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchhhccccceEEEEEec--C--CHHHHHHHHHHHHCCC
Confidence            995  33344444599999999998743210    00000  00111111122221111  1  1677899999999999


Q ss_pred             eeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          233 LVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       233 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +.+.+...+++++++++++.+.+++..+|+++
T Consensus       288 ~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         288 LKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             eeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            98888788999999999999998877788774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.95  E-value=2.9e-26  Score=189.19  Aligned_cols=211  Identities=25%  Similarity=0.330  Sum_probs=175.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      .+++|+|+.+|++++.+++||+|+++                               |+|++|++++.+.++++ |+++ 
T Consensus        61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~-  138 (306)
T cd08258          61 HEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL-PENL-  138 (306)
T ss_pred             cceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEEC-cCCC-
Confidence            46789999999999999999999874                               78999999999999999 9884 


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHHcCCceeE
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA--GSKDKVDLLKNKFGFDEAF  130 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~--~s~~~~~~~~~~~g~~~~~  130 (269)
                       +++.++++.++.++|+++...++++++++|+|.| +|++|.+++++|+.+|++|++++  .++++.+.++ ++|++.+ 
T Consensus       139 -~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-  214 (306)
T cd08258         139 -SLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-  214 (306)
T ss_pred             -CHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-
Confidence             4444458888999999998888999999999976 59999999999999999988774  3455777777 8999877 


Q ss_pred             ecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeee
Q 024337          131 NYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF  208 (269)
Q Consensus       131 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (269)
                      ++... ++.+.+.+..++ ++|+++||.|+ ..+...++.|+++|+++.+|....     .....++..++.+++++.|+
T Consensus       215 ~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~  288 (306)
T cd08258         215 NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGS  288 (306)
T ss_pred             CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEE
Confidence            77776 788888877765 89999999985 788899999999999999988542     12334556777899999998


Q ss_pred             eecccccchHHHHHHHHHHHHCC
Q 024337          209 IVLDHYHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~g  231 (269)
                      ....     .++++++++++++|
T Consensus       289 ~~~~-----~~~~~~~~~~~~~~  306 (306)
T cd08258         289 RSST-----PASWETALRLLASG  306 (306)
T ss_pred             ecCc-----hHhHHHHHHHHhcC
Confidence            8755     56688888888765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.95  E-value=3.7e-26  Score=188.59  Aligned_cols=238  Identities=28%  Similarity=0.386  Sum_probs=195.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      .+++|.|+.+|++++.+++||+|+++      |+|++|+.++...++++ |++++.. .++.++..+.++|+++.....+
T Consensus        65 ~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~  142 (309)
T cd05289          65 HDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALK-PANLSFE-EAAALPLAGLTAWQALFELGGL  142 (309)
T ss_pred             cceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCC
Confidence            36789999999999999999999985      69999999999999999 8885544 4678888999999999777779


Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~  156 (269)
                      .++++++|+|++|++|++++++++..|++|+++++++ +.+.++ .+|.+.+++.... ++.+    .+.+ ++|.++||
T Consensus       143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~  215 (309)
T cd05289         143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER----AAAPGGVDAVLDT  215 (309)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh----ccCCCCceEEEEC
Confidence            9999999999999999999999999999999999777 888887 8998778877664 4433    2333 79999999


Q ss_pred             CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee
Q 024337          157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV  236 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  236 (269)
                      +|+.....++++++++|+++.++....     .  ..   ..+.+++++.......   . .+.+..+++++.++.+.+.
T Consensus       216 ~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~--~~---~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~  281 (309)
T cd05289         216 VGGETLARSLALVKPGGRLVSIAGPPP-----A--EQ---AAKRRGVRAGFVFVEP---D-GEQLAELAELVEAGKLRPV  281 (309)
T ss_pred             CchHHHHHHHHHHhcCcEEEEEcCCCc-----c--hh---hhhhccceEEEEEecc---c-HHHHHHHHHHHHCCCEEEe
Confidence            999888999999999999999976321     0  00   3345566665554322   1 5678889999999999887


Q ss_pred             eehccccccHHHHHHHHhcCCCcceEEE
Q 024337          237 EDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +.+.+++++++++++.+.+++..+|+++
T Consensus       282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         282 VDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            7788999999999999998877788764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=2e-25  Score=180.97  Aligned_cols=198  Identities=31%  Similarity=0.424  Sum_probs=166.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--------------------------cceeeEEEecCCceeecCCCCCCcchhh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--------------------------TGWEEYSLITAPYLFKIQHTDVPLSYYT   57 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~   57 (269)
                      .+++|+|.++|++++.|++||+|+++                          |+|++|+.++.+.++++ |++++.. ++
T Consensus        35 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a  112 (271)
T cd05188          35 HEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPL-PDGLSLE-EA  112 (271)
T ss_pred             cccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEEC-CCCCCHH-Hh
Confidence            47889999999999999999999873                          68999999999999999 8885443 57


Q ss_pred             hhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhh
Q 024337           58 GILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD  137 (269)
Q Consensus        58 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~  137 (269)
                      +.++.++.+||+++.....+.++++|+|+|+++ +|++++++++..|.+|+++++++++.+.++ ++|.+.+++.... +
T Consensus       113 ~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~  189 (271)
T cd05188         113 ALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-D  189 (271)
T ss_pred             hHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-C
Confidence            788899999999997777779999999999966 999999999999999999999999999998 8898888887765 6


Q ss_pred             HHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          138 LNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       138 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      ..+.+. ...+ ++|+++||+|. .....++++++++|+++.++.....     .........+.+++++.++....
T Consensus       190 ~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  260 (271)
T cd05188         190 LEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT  260 (271)
T ss_pred             HHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC
Confidence            666665 4444 89999999998 8889999999999999999875431     11122446678899998887654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.82  E-value=5.5e-19  Score=127.38  Aligned_cols=127  Identities=27%  Similarity=0.451  Sum_probs=113.6

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC-chhHhhhHhh
Q 024337           91 AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG-GKTLDAVLPN  168 (269)
Q Consensus        91 ~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g-~~~~~~~~~~  168 (269)
                      ++|++++|+|+++|++|+++++++++.++++ ++|+++++++++. ++.+++++.+++ ++|++|||+| ...++.++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~   78 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL   78 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence            6899999999999999999999999999999 9999999999997 899999999988 9999999999 5999999999


Q ss_pred             hhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHH
Q 024337          169 MKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK  229 (269)
Q Consensus       169 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (269)
                      ++++|+++.+|...     ......+...++.+++++.++...+     .+.++++++++.
T Consensus        79 l~~~G~~v~vg~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la  129 (130)
T PF00107_consen   79 LRPGGRIVVVGVYG-----GDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA  129 (130)
T ss_dssp             EEEEEEEEEESSTS-----TSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred             hccCCEEEEEEccC-----CCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence            99999999999864     2345567889999999999998866     566777777665

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.65  E-value=6e-16  Score=111.02  Aligned_cols=122  Identities=30%  Similarity=0.351  Sum_probs=81.2

Q ss_pred             cCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC--chh-HhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh
Q 024337          124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG--GKT-LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS  200 (269)
Q Consensus       124 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  200 (269)
                      ||+++++||+.. ++      ..+++||+||||+|  +.. +..++++| ++|+++.++..           ........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~-----------~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD-----------LPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH-----------HHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc-----------ccchhhhh
Confidence            689999999975 65      22348999999999  644 48888999 99999988630           00111112


Q ss_pred             cceeeeeeeecccc--cchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          201 KRLRMEGFIVLDHY--HLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       201 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                      +...+.........  ...++.++.+.+++.+|+++|.+.++|||+++++|++.+.+++..||+||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22222222222111  12466799999999999999999999999999999999999999999996

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.51  E-value=6.8e-13  Score=111.75  Aligned_cols=177  Identities=12%  Similarity=0.074  Sum_probs=130.8

Q ss_pred             hhHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHH
Q 024337           65 MTAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK  143 (269)
Q Consensus        65 ~~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~  143 (269)
                      ...|.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++ .+|+..+ +      ..+.+ 
T Consensus       186 ~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-~------~~e~v-  255 (413)
T cd00401         186 ESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-T------MEEAV-  255 (413)
T ss_pred             hhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-c------HHHHH-
Confidence            444555544433 368999999998 99999999999999999999999999999998 8888432 1      11222 


Q ss_pred             HHCCCCccEEEeCCCc-hhHhhh-HhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHH
Q 024337          144 RYFPEGIDVYFENVGG-KTLDAV-LPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFL  221 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~-~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (269)
                          .++|++|+|+|. ..+... ++.++++|+++.+|..        ....+...+..+++++.++.....    ...+
T Consensus       256 ----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~  319 (413)
T cd00401         256 ----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYEL  319 (413)
T ss_pred             ----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEc
Confidence                248999999997 556665 9999999999999852        234666777888888887765321    1123


Q ss_pred             H--HHHHHHHCCCe---eeeeehc-----cccc-cHHHHHHHHhcCCC-cceEEEEec
Q 024337          222 E--MIIPHIKEGKL---VYVEDMA-----EGLE-SAPAALIGLFSGQN-VGKQVVAVA  267 (269)
Q Consensus       222 ~--~~~~~~~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gkvvv~~~  267 (269)
                      +  ..+.++.+|.+   .+.+.+.     ++|+ |+.+++..+.++.. ..|+++.++
T Consensus       320 ~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         320 PDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             CCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            4  67899999988   3445555     7798 99999999987653 357776654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.41  E-value=9.2e-12  Score=107.57  Aligned_cols=149  Identities=13%  Similarity=0.084  Sum_probs=107.0

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCCh------------hhHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEE------------ADLNAALK  143 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~------------~~~~~~i~  143 (269)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++.+.++ ++|++. .+|..+.            .++.+..+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            457999999999 99999999999999999999999999999999 999984 3554321            02222222


Q ss_pred             HH-CC--CCccEEEeCCCch------h-HhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh-cceeeeeeeecc
Q 024337          144 RY-FP--EGIDVYFENVGGK------T-LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS-KRLRMEGFIVLD  212 (269)
Q Consensus       144 ~~-~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  212 (269)
                      +. .+  .++|++|+|+|..      . .+.+++.++++|+++.++...+.+..   .......++. +++++.|.... 
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n~-  315 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTDL-  315 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCCC-
Confidence            22 22  2699999999952      4 48999999999999999874332111   1122234554 78888887632 


Q ss_pred             cccchHHHHHHHHHHHHCCCeee
Q 024337          213 HYHLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~~~~  235 (269)
                       +   .++.....+++.++.+..
T Consensus       316 -P---~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        316 -P---SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             -c---hhHHHHHHHHHHhCCccH
Confidence             1   344556788888887754

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.73  E-value=1.3e-07  Score=76.73  Aligned_cols=169  Identities=16%  Similarity=0.200  Sum_probs=101.1

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHH--CC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY--FP  147 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~--~~  147 (269)
                      +.++++++||.+|+ |+ |..+.++++..|.  +|++++.+++..+.+++.   ++...+ ..... +    +.+.  .+
T Consensus        73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d----~~~l~~~~  144 (272)
T PRK11873         73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-E----IEALPVAD  144 (272)
T ss_pred             ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-c----hhhCCCCC
Confidence            56889999999997 55 8888888888775  799999999998888732   233221 11111 2    2222  23


Q ss_pred             CCccEEEeCCC-----c--hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHH
Q 024337          148 EGIDVYFENVG-----G--KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF  220 (269)
Q Consensus       148 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (269)
                      +.||+|+....     .  ..+..+.+.|+++|+++..+....    ..   ..  ..+.+...+.+......  ..   
T Consensus       145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~----~~---~~--~~~~~~~~~~~~~~~~~--~~---  210 (272)
T PRK11873        145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLR----GE---LP--EEIRNDAELYAGCVAGA--LQ---  210 (272)
T ss_pred             CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeecc----CC---CC--HHHHHhHHHHhccccCC--CC---
Confidence            47999985531     1  568999999999999998765431    11   11  11122222221111111  11   


Q ss_pred             HHHHHHHHHC-C--CeeeeeehccccccHHHHHHHH--hcCCCcceEEEE
Q 024337          221 LEMIIPHIKE-G--KLVYVEDMAEGLESAPAALIGL--FSGQNVGKQVVA  265 (269)
Q Consensus       221 ~~~~~~~~~~-g--~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvvv~  265 (269)
                      ..++.+++.+ |  .+.......++++++.++++.+  .++...++.++.
T Consensus       211 ~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  260 (272)
T PRK11873        211 EEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS  260 (272)
T ss_pred             HHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence            2234444544 3  3334444567899999999988  555555555543

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.68  E-value=1.2e-06  Score=71.01  Aligned_cols=171  Identities=16%  Similarity=0.151  Sum_probs=105.3

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCcee----------------------ecCCCCC-Ccchh-hh
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLF----------------------KIQHTDV-PLSYY-TG   58 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~----------------------~~~p~~~-~~~~~-~a   58 (269)
                      .||.=|...++-|+++.+.+|.||+|+=..++++++.+..+-                      ++.++.. +-+.+ .-
T Consensus        32 ~vPvWGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~~e~~~  111 (314)
T PF11017_consen   32 IVPVWGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPEREDWQ  111 (314)
T ss_pred             ccccceEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcchhHHH
Confidence            366667778889999999999999998333333333222211                      0101100 00111 22


Q ss_pred             hcCCcchhHHHHHHHhhc---CCCCCEEEEecCcchHHHHHHHHHH-Hc-CCEEEEEeCCHHHHHHHHHHcCC-ceeEec
Q 024337           59 ILGMPGMTAYVGFYEVCS---AKHGECVFISAASGAVGQLVGQFAK-LL-GCYVVGSAGSKDKVDLLKNKFGF-DEAFNY  132 (269)
Q Consensus        59 ~l~~~~~~a~~~l~~~~~---~~~~~~vlI~ga~g~vG~~~i~~a~-~~-G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~  132 (269)
                      +|..++...-.+|.+...   .-..+.|+|..|++=+++..+.+++ .. +.+++.++ |..+..+.+ .+|. +.++.|
T Consensus       112 ~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Y  189 (314)
T PF11017_consen  112 MLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTY  189 (314)
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeeh
Confidence            334443333334433321   2345789999999999999999998 33 45999999 778888998 9997 678877


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCC-EEEEEeccc
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRG-RIAACGMIS  182 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G-~~v~~g~~~  182 (269)
                      ++       +.++.....-+++|+.|. ......-+.++..= ..+.+|...
T Consensus       190 d~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  190 DD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             hh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            54       333333456799999998 45555555555532 456666544

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.68  E-value=2.5e-07  Score=80.21  Aligned_cols=104  Identities=19%  Similarity=0.247  Sum_probs=79.4

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCCh------------hhHHHHHHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEE------------ADLNAALKR  144 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~------------~~~~~~i~~  144 (269)
                      .++++++|.|+ |.+|+++++.++.+|++|+++++++++.+.++ ++|.+. .++..+.            .++.+...+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            46789999998 99999999999999999999999999999998 899865 2332110            023332222


Q ss_pred             HCC---CCccEEEeCC---Cc-h---hHhhhHhhhhcCCEEEEEecccc
Q 024337          145 YFP---EGIDVYFENV---GG-K---TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       145 ~~~---~~~d~vid~~---g~-~---~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ...   .++|++|+|+   |. .   ..+..++.|++++.++.++...+
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence            222   2699999999   64 2   56788999999999999977554

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.66  E-value=2.3e-07  Score=71.75  Aligned_cols=81  Identities=25%  Similarity=0.388  Sum_probs=65.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----ceeEecCChhhHHHHHHHHCCC--CccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPE--GIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~--~~d~  152 (269)
                      +++.++|+||++|+|.++++.+...|++|+.+.|..++++.+.++++.    ...+|..+..+....+......  ++|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            458899999999999999999999999999999999999998889983    2356766642444445444433  6999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +++++|-
T Consensus        85 LvNNAGl   91 (246)
T COG4221          85 LVNNAGL   91 (246)
T ss_pred             EEecCCC
Confidence            9999985

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=98.52  E-value=1.1e-07  Score=66.06  Aligned_cols=44  Identities=27%  Similarity=0.413  Sum_probs=37.8

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeec
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKI   46 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~   46 (269)
                      --|++|+|+++|+++++|++||+|++.                              |+|+||+++++++++++
T Consensus        36 GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   36 GHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             -SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             ccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence            368899999999999999999999764                              78999999999998875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.49  E-value=5.5e-06  Score=70.03  Aligned_cols=99  Identities=21%  Similarity=0.205  Sum_probs=71.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC-
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG-  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g-  158 (269)
                      +.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+...++........+..++.+.+.     .+|++|+|++ 
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence            456899998 999999999999999999999999888887764566532222222213333332     5899999983 


Q ss_pred             --c--h--hHhhhHhhhhcCCEEEEEeccccc
Q 024337          159 --G--K--TLDAVLPNMKIRGRIAACGMISQY  184 (269)
Q Consensus       159 --~--~--~~~~~~~~l~~~G~~v~~g~~~~~  184 (269)
                        .  .  .....++.+++++.++.++...+.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence              2  1  236788889999999998865543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.48  E-value=2.2e-06  Score=73.02  Aligned_cols=104  Identities=18%  Similarity=0.197  Sum_probs=77.8

Q ss_pred             hhHHHHHHHhhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHH
Q 024337           65 MTAYVGFYEVCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK  143 (269)
Q Consensus        65 ~~a~~~l~~~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~  143 (269)
                      ..+|.++.+..++. .+++++|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|+. +.      ++.+.+.
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~  266 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE  266 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh
Confidence            44556654433544 8999999998 99999999999999999999998887766665 55653 22      2222222


Q ss_pred             HHCCCCccEEEeCCCc-hhHh-hhHhhhhcCCEEEEEeccc
Q 024337          144 RYFPEGIDVYFENVGG-KTLD-AVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~~  182 (269)
                           ++|++++|+|. ..+. ..+..+++++.++..|...
T Consensus       267 -----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        267 -----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             -----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                 58999999997 4555 6788899999999988643

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.43  E-value=4.3e-06  Score=70.79  Aligned_cols=102  Identities=19%  Similarity=0.228  Sum_probs=75.7

Q ss_pred             hHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHH
Q 024337           66 TAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR  144 (269)
Q Consensus        66 ~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~  144 (269)
                      .++.++.+..+ ...|++|+|.|. |.+|+.+++.++.+|++|++++.++.+...+. ..|+. +.      +..+.++ 
T Consensus       180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal~-  249 (406)
T TIGR00936       180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAAK-  249 (406)
T ss_pred             hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHHh-
Confidence            34444434333 368999999998 99999999999999999999988887766666 66652 22      1222222 


Q ss_pred             HCCCCccEEEeCCCc-hhHh-hhHhhhhcCCEEEEEecc
Q 024337          145 YFPEGIDVYFENVGG-KTLD-AVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       145 ~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~  181 (269)
                          +.|++|+++|. ..+. ..+..+++++.++.+|..
T Consensus       250 ----~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       250 ----IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             ----cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence                47999999997 4455 488899999999988763

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08324 short chain dehydrogenase; Validated

Probab=98.43  E-value=2.7e-06  Score=77.91  Aligned_cols=140  Identities=19%  Similarity=0.199  Sum_probs=88.9

Q ss_pred             cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEE
Q 024337           30 TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVG  109 (269)
Q Consensus        30 g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~  109 (269)
                      -++++|..+++..++.+ ..   ++.+.+.+...         ......++++++|+||+|++|..+++.+...|++|++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~---~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl  451 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EY---WSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL  451 (681)
T ss_pred             hhcCCccCCChhhhcce-ee---ehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence            35777877777766665 22   23222221100         0112236799999999999999999999999999999


Q ss_pred             EeCCHHHHHHHHHHcCC--c---eeEecCChhhHHHHHHHHC--CCCccEEEeCCCc-----------------------
Q 024337          110 SAGSKDKVDLLKNKFGF--D---EAFNYKEEADLNAALKRYF--PEGIDVYFENVGG-----------------------  159 (269)
Q Consensus       110 ~~~s~~~~~~~~~~~g~--~---~~~~~~~~~~~~~~i~~~~--~~~~d~vid~~g~-----------------------  159 (269)
                      ++++.++.+.+.+.++.  .   ...|..+..+....+.+..  .+++|++|+++|.                       
T Consensus       452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99998887766545543  1   2345554413333333321  2379999999982                       


Q ss_pred             ---hhHhhhHhhhhc---CCEEEEEeccc
Q 024337          160 ---KTLDAVLPNMKI---RGRIAACGMIS  182 (269)
Q Consensus       160 ---~~~~~~~~~l~~---~G~~v~~g~~~  182 (269)
                         ..++.+++.+++   +|+++.++...
T Consensus       532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence               113445666665   58999887654

>PLN02494 adenosylhomocysteinase

Probab=98.41  E-value=4.5e-06  Score=71.43  Aligned_cols=103  Identities=17%  Similarity=0.191  Sum_probs=78.4

Q ss_pred             hhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHH
Q 024337           65 MTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK  143 (269)
Q Consensus        65 ~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~  143 (269)
                      ...+.++.+..++ -.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+.. +      +..+.+.
T Consensus       238 qS~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~v-v------~leEal~  308 (477)
T PLN02494        238 HSLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQV-L------TLEDVVS  308 (477)
T ss_pred             ccHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCee-c------cHHHHHh
Confidence            3445565554343 57999999998 99999999999999999999998877766665 566642 2      2222332


Q ss_pred             HHCCCCccEEEeCCCch-h-HhhhHhhhhcCCEEEEEecc
Q 024337          144 RYFPEGIDVYFENVGGK-T-LDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~  181 (269)
                           ..|++++|.|.. . ....+..|++++.++.+|..
T Consensus       309 -----~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        309 -----EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             -----hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence                 379999999974 3 47899999999999999874

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.38  E-value=2.3e-06  Score=68.06  Aligned_cols=81  Identities=20%  Similarity=0.247  Sum_probs=61.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-------eEecCChhhHHHHHHH-HC-CC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-------AFNYKEEADLNAALKR-YF-PE  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-------~~~~~~~~~~~~~i~~-~~-~~  148 (269)
                      ..+.+++|+|||+|+|...+..+...|.+++.+.|++++++.+.+++.-.+       .+|..++ +-.+.+.+ .. .+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999887765554321       3455554 33444433 22 22


Q ss_pred             -CccEEEeCCCc
Q 024337          149 -GIDVYFENVGG  159 (269)
Q Consensus       149 -~~d~vid~~g~  159 (269)
                       .+|+.++++|.
T Consensus        83 ~~IdvLVNNAG~   94 (265)
T COG0300          83 GPIDVLVNNAGF   94 (265)
T ss_pred             CcccEEEECCCc
Confidence             79999999994

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.33  E-value=9.4e-06  Score=66.53  Aligned_cols=93  Identities=20%  Similarity=0.301  Sum_probs=73.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+++++|+|. |.+|+.+++.++.+|++|++++++.++.+.++ ++|...+ ..  . ++.+.+.     ++|+||+|++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~--~-~l~~~l~-----~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HL--S-ELAEEVG-----KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cH--H-HHHHHhC-----CCCEEEECCC
Confidence            5899999998 99999999999999999999999988888887 7886422 11  1 2333332     5999999998


Q ss_pred             ch-hHhhhHhhhhcCCEEEEEeccc
Q 024337          159 GK-TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       159 ~~-~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      .. .....++.+++++.++.++..+
T Consensus       220 ~~~i~~~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        220 ALVLTKEVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             hhhhhHHHHHcCCCCcEEEEEccCC
Confidence            64 3456778899999999887744

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.32  E-value=4.9e-06  Score=62.55  Aligned_cols=80  Identities=19%  Similarity=0.307  Sum_probs=59.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ceeEecCCh---hhHHHHHHHHCCCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEE---ADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~~~~~~~~---~~~~~~i~~~~~~~~d~v  153 (269)
                      .|-+|||.||++|+|+..++-....|-+|++..|++++++.++.....  ..+.|..+.   +.+.+.+++..+ ..+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence            367999999999999999999999999999999999999998733322  235555443   124444443222 58999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++|+|-
T Consensus        83 iNNAGI   88 (245)
T COG3967          83 INNAGI   88 (245)
T ss_pred             eecccc
Confidence            999983

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.31  E-value=7.7e-06  Score=65.53  Aligned_cols=142  Identities=18%  Similarity=0.240  Sum_probs=93.8

Q ss_pred             CCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh-cCCCCCEEEEecCcchHHH
Q 024337           16 ENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC-SAKHGECVFISAASGAVGQ   94 (269)
Q Consensus        16 ~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~-~~~~~~~vlI~ga~g~vG~   94 (269)
                      ..+.+++||+++...+|.+|.. +...++.+ +.+  +++..+..    .+...++.... .+.++++||-.|+ |. |.
T Consensus        63 ~~~p~~~g~~~~i~p~~~~~~~-~~~~~i~i-~p~--~afgtg~h----~tt~~~l~~l~~~~~~~~~VLDiGc-Gs-G~  132 (250)
T PRK00517         63 YFHPIRIGDRLWIVPSWEDPPD-PDEINIEL-DPG--MAFGTGTH----PTTRLCLEALEKLVLPGKTVLDVGC-GS-GI  132 (250)
T ss_pred             HCCCEEEcCCEEEECCCcCCCC-CCeEEEEE-CCC--CccCCCCC----HHHHHHHHHHHhhcCCCCEEEEeCC-cH-HH
Confidence            3566889999999889998855 77788888 444  45422221    22222332222 2578999999997 44 87


Q ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcee---EecCChhhHHHHHHHHCCC-CccEEEeCCCc----hhHhhh
Q 024337           95 LVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEA---FNYKEEADLNAALKRYFPE-GIDVYFENVGG----KTLDAV  165 (269)
Q Consensus        95 ~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~---~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~----~~~~~~  165 (269)
                      .++.+++ .|+ +|++++.++...+.+++++....+   +....            +. .||+|+.+...    ..+..+
T Consensus       133 l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~------------~~~~fD~Vvani~~~~~~~l~~~~  199 (250)
T PRK00517        133 LAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ------------GDLKADVIVANILANPLLELAPDL  199 (250)
T ss_pred             HHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc------------CCCCcCEEEEcCcHHHHHHHHHHH
Confidence            7776555 566 699999999988887744322111   11100            11 59999977654    346778


Q ss_pred             HhhhhcCCEEEEEec
Q 024337          166 LPNMKIRGRIAACGM  180 (269)
Q Consensus       166 ~~~l~~~G~~v~~g~  180 (269)
                      .+.|+++|+++..+.
T Consensus       200 ~~~LkpgG~lilsgi  214 (250)
T PRK00517        200 ARLLKPGGRLILSGI  214 (250)
T ss_pred             HHhcCCCcEEEEEEC
Confidence            889999999998765

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.27  E-value=1.3e-05  Score=63.59  Aligned_cols=104  Identities=21%  Similarity=0.224  Sum_probs=70.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---ce--eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DE--AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~~--~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      ++++++|+|++|++|..+++.+...|++|+.+++++++.+.+.+.+..   -.  ..|..+.....+.+++...  +++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999998877665323321   12  2244433123322322211  3689


Q ss_pred             EEEeCCCch------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          152 VYFENVGGK------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       152 ~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      .++.++|..                        .++..++.++++|+++.++...
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999988741                        1344556667788999887643

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.27  E-value=1.4e-05  Score=57.67  Aligned_cols=93  Identities=19%  Similarity=0.235  Sum_probs=64.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ++.+++|.|+ |++|.+++..+..+|+ +|+++.|+.++.+.+.+.++..  ..++++   ++.+.+.     .+|++|+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVIN   81 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEEE
Confidence            5899999998 9999999999999999 5999999999988877677432  244443   3333333     4999999


Q ss_pred             CCCchhHhhhHhhhhcC----CEEEEEec
Q 024337          156 NVGGKTLDAVLPNMKIR----GRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~~~~~~~l~~~----G~~v~~g~  180 (269)
                      |++.......-..+.+.    +.++.++.
T Consensus        82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   82 ATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            99864322222233333    46666654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.27  E-value=2e-05  Score=64.06  Aligned_cols=78  Identities=24%  Similarity=0.360  Sum_probs=58.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYFENV  157 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vid~~  157 (269)
                      ++++|+||+|++|..+++.+...|++|++++++.++.+.+. ..+... ..|..+.+++.+.+.+..  .+++|++++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999999999999999999999988877766 555543 356665423333333332  23799999999


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      |.
T Consensus        81 g~   82 (274)
T PRK05693         81 GY   82 (274)
T ss_pred             CC
Confidence            83

>PRK12742 oxidoreductase; Provisional

Probab=98.25  E-value=2.8e-05  Score=61.62  Aligned_cols=102  Identities=19%  Similarity=0.213  Sum_probs=67.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++++++|+||+|++|..+++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+.  +++|+++++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence            4689999999999999999999999999988765 45555554435565432 3444431233333322  369999999


Q ss_pred             CCchh--------------------------HhhhHhhhhcCCEEEEEeccc
Q 024337          157 VGGKT--------------------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       157 ~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|...                          ...+++.++.+|+++.++...
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  134 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN  134 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence            87410                          123344556678999887644

>PRK06182 short chain dehydrogenase; Validated

Probab=98.22  E-value=2.9e-05  Score=63.10  Aligned_cols=80  Identities=25%  Similarity=0.394  Sum_probs=58.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      ++++++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+.+++...+.+..  .+++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3678999999999999999999999999999999988876665 444432 356665423333343332  237999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        81 ~ag~   84 (273)
T PRK06182         81 NAGY   84 (273)
T ss_pred             CCCc
Confidence            9984

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.20  E-value=1.9e-05  Score=65.32  Aligned_cols=108  Identities=18%  Similarity=0.195  Sum_probs=73.8

Q ss_pred             ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC---CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 024337           42 YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA---KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKV  117 (269)
Q Consensus        42 ~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~---~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~  117 (269)
                      ..+++ |+.  ++.+.+....+..+++.++......   .++++|+|.|+ |.+|..+++.++..|+ +|+++.+++++.
T Consensus       140 ~a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         140 KAIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             HHHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            44556 666  4434455556777788787433221   37899999998 9999999999998776 899999998876


Q ss_pred             HHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhH
Q 024337          118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTL  162 (269)
Q Consensus       118 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~  162 (269)
                      +.+.+++|.. +++..   +..+.+.     .+|+||.|++....
T Consensus       216 ~~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         216 EELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence            5444388873 33321   3333332     48999999997443

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.15  E-value=4.9e-05  Score=61.34  Aligned_cols=81  Identities=14%  Similarity=0.162  Sum_probs=57.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      ++++++|+|+++++|..+++.+...|++|++++++.++.+.+.++++...   ..|..+.+++.+.+.+..  -+++|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999999999999887666554555321   245554423333333321  1368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            999873

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.11  E-value=4.1e-05  Score=62.36  Aligned_cols=79  Identities=18%  Similarity=0.320  Sum_probs=58.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHH---HCCCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKR---YFPEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~---~~~~~~d~vi  154 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.+   ..++++|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4678999999999999999999999999999999998887776 555543 3465554223233332   2335799999


Q ss_pred             eCCC
Q 024337          155 ENVG  158 (269)
Q Consensus       155 d~~g  158 (269)
                      +++|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9987

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=98.09  E-value=1.7e-05  Score=55.12  Aligned_cols=95  Identities=20%  Similarity=0.283  Sum_probs=66.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~-~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      |+.+||-.|+  |.|..++.+++ ..+++|++++.+++..+.+++.+   +...-+..... ++ . ......++||+|+
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~-~-~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA-E-FDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC-H-GGTTTSSCEEEEE
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc-c-cCcccCCCCCEEE
Confidence            6889999996  67999999998 47889999999999999888665   33221211111 33 1 1111223799999


Q ss_pred             eCC-Cc----hh------HhhhHhhhhcCCEEEEE
Q 024337          155 ENV-GG----KT------LDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       155 d~~-g~----~~------~~~~~~~l~~~G~~v~~  178 (269)
                      ... ..    ..      ++.+.+.|+|+|+++.-
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            877 22    22      67888999999998863

...

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.08  E-value=5.5e-05  Score=60.78  Aligned_cols=105  Identities=25%  Similarity=0.335  Sum_probs=72.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce-----eEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE-----AFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~-----~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      .++.|+|+||++|+|.+++.-.-..|++++.+.+..++++.+.+   +.+...     ..|..+..+..+.+.+..  -|
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999998888888777766521   333322     234444313333333222  24


Q ss_pred             CccEEEeCCCchh--------------------------HhhhHhhhhcC--CEEEEEecccc
Q 024337          149 GIDVYFENVGGKT--------------------------LDAVLPNMKIR--GRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~~~--------------------------~~~~~~~l~~~--G~~v~~g~~~~  183 (269)
                      ++|+.++++|-..                          .+.++..|++.  |+++.++...+
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence            8999999998410                          25577777763  99999987665

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.08  E-value=0.0001  Score=59.59  Aligned_cols=105  Identities=22%  Similarity=0.320  Sum_probs=70.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc---eeEecCChhhHHHHHHHHC-CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD---EAFNYKEEADLNAALKRYF-PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~i~~~~-~~~~  150 (269)
                      ++++++|+|+++++|.++++.+...|++|++++++.++.+.+.+++    +..   ...|..+..+....+.+.. -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4789999999999999999999999999999999988766554333    221   1345454323333333322 1479


Q ss_pred             cEEEeCCCch--------------------------hHhhhHhhhhc--CCEEEEEecccc
Q 024337          151 DVYFENVGGK--------------------------TLDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      |++++++|..                          ..+.+++.|+.  .|++|.++....
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~  147 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI  147 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence            9999998741                          02345555543  489998876543

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.06  E-value=3.6e-05  Score=63.38  Aligned_cols=81  Identities=21%  Similarity=0.268  Sum_probs=59.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--e--EecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--A--FNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~--~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++.. .  .  .|..+..+..+.+.+...  +++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999999988877665466531 1  1  455553233333333221  3799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|+++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999984

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.04  E-value=7.4e-05  Score=64.29  Aligned_cols=91  Identities=18%  Similarity=0.212  Sum_probs=70.4

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+. +.      ++.+.++     ..|+++.+
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~-----~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE-----TADIFVTA  316 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh-----cCCEEEEC
Confidence            357999999998 99999999999999999999987766655555 44543 11      2333332     48999999


Q ss_pred             CCc-hhH-hhhHhhhhcCCEEEEEecc
Q 024337          157 VGG-KTL-DAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       157 ~g~-~~~-~~~~~~l~~~G~~v~~g~~  181 (269)
                      +|. ..+ ...+..|++++.++.+|..
T Consensus       317 tGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             CCcccccCHHHHhccCCCcEEEEcCCC
Confidence            997 445 4799999999999999864

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=98.02  E-value=2.9e-05  Score=63.53  Aligned_cols=96  Identities=20%  Similarity=0.156  Sum_probs=64.0

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCCccE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ..++++||-.|+ |. |..++.+++ .|+ +|++++.++...+.+++++.   ....+..... +    ......++||+
T Consensus       157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence            467899999997 43 888877766 465 99999999998887774332   2111111111 1    11122348999


Q ss_pred             EEeCCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          153 YFENVGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       153 vid~~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+.....    ..+..+.+.|+++|.++..|.
T Consensus       229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            9876653    356778899999999998765

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.00  E-value=6.7e-05  Score=60.26  Aligned_cols=81  Identities=17%  Similarity=0.179  Sum_probs=58.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+...++++.. ...|..+..+....+.+..  -+++|+++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999999999999999999999999999999888766654355543 2345555422333333221  136899999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.00  E-value=9.6e-05  Score=61.91  Aligned_cols=105  Identities=24%  Similarity=0.223  Sum_probs=69.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .|...   ..|..+..+....+.+..  -+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            467899999999999999999999999999999998876554322   34322   245555412322222221  1379


Q ss_pred             cEEEeCCCch--------------------------hHhhhHhhhhc--CCEEEEEecccc
Q 024337          151 DVYFENVGGK--------------------------TLDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      |++|+++|..                          ..+.+++.+.+  .|++|.++....
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            9999999841                          01234555554  589998876543

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.97  E-value=0.0009  Score=53.80  Aligned_cols=81  Identities=11%  Similarity=0.141  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|.|++|++|..+++.+...|++ |++++++.++.+...+   ..+..   ..+|..+..++.+.+....  -++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5688999999999999999999999998 9999988765543221   23332   1245555412333232221  136


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|.+|++.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999984

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.97  E-value=7.3e-05  Score=60.33  Aligned_cols=80  Identities=21%  Similarity=0.288  Sum_probs=57.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      ++++++|+||++++|..+++.+...|++|+++++++++.+.+.+.++..   ...|..+..+....+.+..  -+++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4689999999999999999999999999999999988877766455431   1234444313333333322  1379999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      ++++|
T Consensus        85 i~~ag   89 (263)
T PRK06200         85 VGNAG   89 (263)
T ss_pred             EECCC
Confidence            99988

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.96  E-value=5.7e-05  Score=63.11  Aligned_cols=81  Identities=25%  Similarity=0.374  Sum_probs=57.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHH--CCCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRY--FPEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~--~~~~~  150 (269)
                      ++++++|+||++++|..+++.+...|++|+++++++++.+.+.+   +.|...   ..|..+.++..+.+.+.  ..+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999999887765442   334432   34555541222222222  12479


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999983

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.95  E-value=0.00018  Score=58.67  Aligned_cols=92  Identities=21%  Similarity=0.306  Sum_probs=68.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+++++|.|. |.+|.++++.++.+|++|++..+++++.+.+. +.|.. .++.  . ++.+.+.     ++|++++|++
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~--~-~l~~~l~-----~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL--N-KLEEKVA-----EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH--H-HHHHHhc-----cCCEEEECCC
Confidence            4789999998 99999999999999999999999988777666 66643 2211  1 3333332     5899999998


Q ss_pred             chhH-hhhHhhhhcCCEEEEEecc
Q 024337          159 GKTL-DAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       159 ~~~~-~~~~~~l~~~G~~v~~g~~  181 (269)
                      ...+ ...++.++++..++.++..
T Consensus       219 ~~ii~~~~l~~~k~~aliIDlas~  242 (287)
T TIGR02853       219 ALVLTADVLSKLPKHAVIIDLASK  242 (287)
T ss_pred             hHHhCHHHHhcCCCCeEEEEeCcC
Confidence            6432 4566778888888888663

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK06484 short chain dehydrogenase; Validated

Probab=97.95  E-value=0.00014  Score=64.76  Aligned_cols=105  Identities=19%  Similarity=0.214  Sum_probs=73.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+....+.+...  +++|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999888877764565432   3455554233333333221  369999


Q ss_pred             EeCCCch----h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          154 FENVGGK----T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      |+++|..    .                       .+.++..++.+|+++.++....
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9998831    0                       2334555656799998876543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.94  E-value=9.7e-05  Score=63.81  Aligned_cols=91  Identities=21%  Similarity=0.264  Sum_probs=64.7

Q ss_pred             hcCCcchhHHHHHHHhhc---CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           59 ILGMPGMTAYVGFYEVCS---AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        59 ~l~~~~~~a~~~l~~~~~---~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ....+..+++.++.....   -.++++|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+.+.+.+|.. +++.. 
T Consensus       158 i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~-  234 (423)
T PRK00045        158 IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD-  234 (423)
T ss_pred             CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH-
Confidence            334466777777743322   257899999998 9999999999999998 8999999988866444377753 33321 


Q ss_pred             hhhHHHHHHHHCCCCccEEEeCCCc
Q 024337          135 EADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus       135 ~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                        +..+.+.     ++|+||+|+|.
T Consensus       235 --~~~~~l~-----~aDvVI~aT~s  252 (423)
T PRK00045        235 --ELPEALA-----EADIVISSTGA  252 (423)
T ss_pred             --HHHHHhc-----cCCEEEECCCC
Confidence              3323232     58999999996

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.93  E-value=0.00015  Score=57.80  Aligned_cols=79  Identities=19%  Similarity=0.243  Sum_probs=57.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      ++.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+..+... ..|..+. +....+.+. .+++|++|+++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~-~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD-AAIRAALAA-AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH-HHHHHHHHH-hCCCCEEEECC
Confidence            46799999999999999999999999999999999887766653555432 3455543 322222221 23699999999


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      |.
T Consensus        86 g~   87 (245)
T PRK07060         86 GI   87 (245)
T ss_pred             CC
Confidence            84

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.93  E-value=9.1e-05  Score=59.77  Aligned_cols=80  Identities=20%  Similarity=0.227  Sum_probs=56.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+..+..   ...|..+..+..+.+.+...  +++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999999999999999999988777666333321   12344443133333333221  368999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      ++++|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.91  E-value=0.0001  Score=59.89  Aligned_cols=80  Identities=20%  Similarity=0.210  Sum_probs=57.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-Cce-eEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FDE-AFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|..+..++.+.+.+..  -+++|++++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999988899999999999888766543555 222 345555423333333222  137999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            9883

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.91  E-value=0.00025  Score=62.61  Aligned_cols=104  Identities=13%  Similarity=0.189  Sum_probs=68.5

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CC------c-eeEecCChhhH
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--------GF------D-EAFNYKEEADL  138 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--------g~------~-~~~~~~~~~~~  138 (269)
                      ..+.+.+++++|+||+|++|..+++.+...|++|++++|+.++.+.+.+.+        |.      . ...|..+.   
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~---  150 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP---  150 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH---
Confidence            345678999999999999999999999999999999999988775543221        21      1 12344332   


Q ss_pred             HHHHHHHCCCCccEEEeCCCchh----------------HhhhHhhhhc--CCEEEEEeccc
Q 024337          139 NAALKRYFPEGIDVYFENVGGKT----------------LDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       139 ~~~i~~~~~~~~d~vid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                       +.+.+.. +++|++|+|+|...                ....++.+..  .++||.++...
T Consensus       151 -esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        151 -DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             -HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence             2233322 36999999998420                1223333333  36899887654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.90  E-value=0.00027  Score=61.75  Aligned_cols=80  Identities=19%  Similarity=0.302  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCce-eEecCChhhHHHHH-HHHC--CCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFDE-AFNYKEEADLNAAL-KRYF--PEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~~~g~~~-~~~~~~~~~~~~~i-~~~~--~~~~d~  152 (269)
                      ++++++|+|++|++|..+++.+...|++|++++++.  ++.+.+.++++... .+|..+. +..+.+ ....  .+++|+
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAP-DAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHHHHhCCCCCE
Confidence            578999999999999999999999999999998742  33333333555432 3566554 333332 2221  136999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +|+++|.
T Consensus       288 vi~~AG~  294 (450)
T PRK08261        288 VVHNAGI  294 (450)
T ss_pred             EEECCCc
Confidence            9999983

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.88  E-value=0.00019  Score=54.86  Aligned_cols=110  Identities=19%  Similarity=0.266  Sum_probs=76.2

Q ss_pred             cCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCcee-EecCCh
Q 024337           60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEE  135 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~-~~~~~~  135 (269)
                      +..+...|. ++ +...++++++||=.|.  |.|+.++-+++..| +|+.+.+.++=.+.+++   .+|...+ +...+.
T Consensus        55 is~P~~vA~-m~-~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG  129 (209)
T COG2518          55 ISAPHMVAR-ML-QLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG  129 (209)
T ss_pred             ecCcHHHHH-HH-HHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc
Confidence            333434443 33 5678999999999995  77999999999988 99999988774443322   6777442 222211


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          136 ADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       136 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                            ...+.+. +||.|+-+.+. ..-+..++.|+++|+++..-.
T Consensus       130 ------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         130 ------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             ------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence                  1222333 89999888886 555778899999999987644

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.88  E-value=0.00022  Score=57.38  Aligned_cols=107  Identities=22%  Similarity=0.187  Sum_probs=74.0

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe---cCCh----hhHHHH-HHHH--
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN---YKEE----ADLNAA-LKRY--  145 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~---~~~~----~~~~~~-i~~~--  145 (269)
                      +-++...|+|.|++.|+|++.+..++..|++|..+.|+.+++..+++.++....+.   +.+.    .+.++. +++.  
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            34566899999999999999999999999999999999999988876776532111   1111    022222 2222  


Q ss_pred             CCCCccEEEeCCCchh--------------------------HhhhHhhhhc---CCEEEEEeccc
Q 024337          146 FPEGIDVYFENVGGKT--------------------------LDAVLPNMKI---RGRIAACGMIS  182 (269)
Q Consensus       146 ~~~~~d~vid~~g~~~--------------------------~~~~~~~l~~---~G~~v~~g~~~  182 (269)
                      ..+.+|.+|+|+|...                          ...+++.++.   .|+++.++...
T Consensus       109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~  174 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL  174 (331)
T ss_pred             ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence            1247999999999621                          2445555654   35888887644

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.88  E-value=0.00011  Score=61.10  Aligned_cols=80  Identities=15%  Similarity=0.215  Sum_probs=57.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C-Cc---eeEecCC--hhhHHHHHHHHCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----G-FD---EAFNYKE--EADLNAALKRYFPE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g-~~---~~~~~~~--~~~~~~~i~~~~~~  148 (269)
                      .|++++|+||++|+|...++.+...|++|+.+++++++.+.+.+++    + ..   ...|..+  . +..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDID-EGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcH-HHHHHHHHHhcC
Confidence            4789999999999999999999889999999999998876554332    1 11   1334432  2 334445444444


Q ss_pred             -CccEEEeCCCc
Q 024337          149 -GIDVYFENVGG  159 (269)
Q Consensus       149 -~~d~vid~~g~  159 (269)
                       .+|++++++|.
T Consensus       131 ~didilVnnAG~  142 (320)
T PLN02780        131 LDVGVLINNVGV  142 (320)
T ss_pred             CCccEEEEecCc
Confidence             67799999873

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00022  Score=56.92  Aligned_cols=81  Identities=17%  Similarity=0.208  Sum_probs=55.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++.+++|+|++|++|..++..+...|++|+++++++++.+...+.+   +.. .  ..|..+.++....+.+...  +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999998887665443232   322 1  2355443122222222211  379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.88  E-value=8.5e-05  Score=60.05  Aligned_cols=80  Identities=20%  Similarity=0.238  Sum_probs=55.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+...+.+   +..   ..+|..+..+....+++..  -+++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999877654432232   221   1245554423333344332  1368


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|.+.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK08017 oxidoreductase; Provisional

Probab=97.86  E-value=0.00022  Score=57.21  Aligned_cols=78  Identities=18%  Similarity=0.273  Sum_probs=57.9

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHH---HHHHHHCCCCccEEEeC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLN---AALKRYFPEGIDVYFEN  156 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~---~~i~~~~~~~~d~vid~  156 (269)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.++ ..+... ..|..+..+..   +.+.+...+++|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999999999999999999999999999999998888777 667643 34555431222   23333333578999988


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            873

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.86  E-value=0.00023  Score=56.85  Aligned_cols=102  Identities=19%  Similarity=0.222  Sum_probs=64.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc---eeEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD---EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+|++|..++..+...|.+|+++.++.+ +.+.+.+   ..+..   ...|..+..+....+.+...  ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999887643 3332221   22321   12355554233333333221  36


Q ss_pred             ccEEEeCCCch--------------------hHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGGK--------------------TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +|+++.++|..                    .++.+.+.+..+|+++.++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            89999888631                    12345555555688988865

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.86  E-value=0.00016  Score=54.96  Aligned_cols=92  Identities=17%  Similarity=0.215  Sum_probs=64.4

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCc--
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGG--  159 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~--  159 (269)
                      |+|+||+|.+|..+++.+...|.+|++++|++++.+.   ..+.+. ..|..+.    +.+.+... ++|.||++.|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~----~~~~~al~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDP----DSVKAALK-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCH----HHHHHHHT-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhh----hhhhhhhh-hcchhhhhhhhhc
Confidence            7899999999999999999999999999999887765   223322 2333332    22333222 59999999983  


Q ss_pred             ---hhHhhhHhhhhcCC--EEEEEeccc
Q 024337          160 ---KTLDAVLPNMKIRG--RIAACGMIS  182 (269)
Q Consensus       160 ---~~~~~~~~~l~~~G--~~v~~g~~~  182 (269)
                         ......++.++..|  +++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence               34555666665544  788776644

...

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00013  Score=58.94  Aligned_cols=81  Identities=16%  Similarity=0.213  Sum_probs=56.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CC-c---eeEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GF-D---EAFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~-~---~~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      ++++++|+||++++|..+++.+...|++|+.+++++++.+.+.+++    +. .   ...|..+..+..+.+.+..  -+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999999987765543222    11 1   1235555423333333322  13


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++++++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00016  Score=58.23  Aligned_cols=83  Identities=14%  Similarity=0.179  Sum_probs=57.6

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc----eeEecCChhhHHHHHHHHC--CCCc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .-++.+++|+||+|++|..+++.+...|++|+++.++++..+.+.+...-.    ...|..+.....+.+.+..  -+++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            357799999999999999999999999999999999887766655233222    2345444312222222221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        88 d~vi~~ag~   96 (264)
T PRK12829         88 DVLVNNAGI   96 (264)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00012  Score=58.70  Aligned_cols=81  Identities=23%  Similarity=0.287  Sum_probs=56.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+|+++++|..+++.+...|++|++++++.++.+.+.+++   +..   ...|..+..+..+.+.+..  -+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999988766554333   221   1244444323333333321  1379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00013  Score=58.73  Aligned_cols=81  Identities=15%  Similarity=0.132  Sum_probs=55.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----Cc---eeEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-----FD---EAFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-----~~---~~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      .+++++|.|+++++|..+++.+...|++|+.+++++++.+.+.+++.     ..   ...|..+..++...+.+..  -+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998887665543332     11   1234444313333333221  13


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++++++|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            79999999983

>PRK06196 oxidoreductase; Provisional

Probab=97.83  E-value=0.00018  Score=59.75  Aligned_cols=80  Identities=15%  Similarity=0.237  Sum_probs=56.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-Cc-eeEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FD-EAFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      .+.+++|+||+|++|..++..+...|++|++++++.++.+.+.+++. .. ...|..+..+....+.+..  .+++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            46899999999999999999999999999999999887665442332 21 1345554323333333332  24799999


Q ss_pred             eCCC
Q 024337          155 ENVG  158 (269)
Q Consensus       155 d~~g  158 (269)
                      +++|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9997

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00015  Score=57.03  Aligned_cols=78  Identities=19%  Similarity=0.186  Sum_probs=55.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++++|+|++|++|...++.+...|++|+++++++++.+.++ +++-..  .+|..+..++.+.+.....+++|+++.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            57999999999999999999999999999999887766555 443222  345555413333333333347999999886


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            3

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00018  Score=59.68  Aligned_cols=81  Identities=16%  Similarity=0.163  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc---eeEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD---EAFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      ++++++|+||++++|..+++.+...|++|++++|+.++.+.+.+++     +..   ..+|..+..+....+.+..  .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999987765443232     111   1235544312333333322  23


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++|+++|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            79999999873

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00019  Score=57.28  Aligned_cols=81  Identities=15%  Similarity=0.170  Sum_probs=56.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      ++++++|.||+|++|...++.+...|++|+++++++++.+.+.++++...   ..|..+..+....+....  .+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999999998877665554666432   234333212222222221  1369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |.++|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999873

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.81  E-value=0.00014  Score=59.83  Aligned_cols=81  Identities=21%  Similarity=0.350  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+..+..+.+....  -+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999999999988766554232   222 1  234444312333333221  1379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++|+|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.81  E-value=0.00047  Score=53.20  Aligned_cols=99  Identities=21%  Similarity=0.307  Sum_probs=68.7

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HcCC-ceeEecCChhhHHHHHHHHCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKN---KFGF-DEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~---~~g~-~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ...+.++++|+..|+ |. |.+++.+++..+  .+|++++.+++..+.+++   .++. +.+.....  +..+.+.. ..
T Consensus        35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~-~~  109 (198)
T PRK00377         35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFT-IN  109 (198)
T ss_pred             HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhh-cC
Confidence            457889999999997 44 999999998764  599999999998887653   3452 22211111  22222222 22


Q ss_pred             CCccEEEeCCCc----hhHhhhHhhhhcCCEEEE
Q 024337          148 EGIDVYFENVGG----KTLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       148 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  177 (269)
                      +.||.||...+.    ..+..+.+.|+++|+++.
T Consensus       110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            479999986552    467788899999999985

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.81  E-value=7.4e-05  Score=67.13  Aligned_cols=77  Identities=17%  Similarity=0.296  Sum_probs=57.6

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHcCCceeEecCC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS---------------------KDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s---------------------~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ...++++|+|.|+ |+.|+++++.++.+|++|++++..                     ..+.+.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            3678999999999 999999999999999999998842                     34566777 889876665432


Q ss_pred             -hhhH-HHHHHHHCCCCccEEEeCCCc
Q 024337          135 -EADL-NAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus       135 -~~~~-~~~i~~~~~~~~d~vid~~g~  159 (269)
                       . +. .+.+.    .++|++|+++|.
T Consensus       211 ~~-~~~~~~~~----~~~D~Vi~AtG~  232 (564)
T PRK12771        211 GE-DITLEQLE----GEFDAVFVAIGA  232 (564)
T ss_pred             CC-cCCHHHHH----hhCCEEEEeeCC
Confidence             1 21 11221    269999999996

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00017  Score=57.93  Aligned_cols=82  Identities=20%  Similarity=0.293  Sum_probs=56.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-ce--eEecCChhhHHHHHHHHC--CCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-DE--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~-~~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ..+++++|+||+|++|..++..+...|++|+++++++++.+.+.+.+   +. ..  ..|..+.+++.+.+.+..  .++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            34789999999999999999999999999999999988776554232   11 11  234444323333333321  237


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999983

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00024  Score=55.92  Aligned_cols=76  Identities=13%  Similarity=0.197  Sum_probs=54.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +++|+||++++|...++.+...|++|+.+.+++++.+.+.++++... ..|..+..++.+.+++.. +++|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            58999999999999999999999999999999888776553555432 345555423333333332 36899999865

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.79  E-value=0.00014  Score=58.41  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=56.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +..   ...|..+.+++...+.+...  +++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            5789999999999999999999999999999999887765554333   221   23444443233333333211  368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        84 d~vi~~ag~   92 (258)
T PRK07890         84 DALVNNAFR   92 (258)
T ss_pred             cEEEECCcc
Confidence            999999973

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.79  E-value=0.00018  Score=58.02  Aligned_cols=81  Identities=16%  Similarity=0.244  Sum_probs=55.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+   +.. .  ..|..+.....+.+.+...  +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999887765544232   222 1  2455554122222332211  379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus        89 d~vi~~Ag~   97 (263)
T PRK07814         89 DIVVNNVGG   97 (263)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00018  Score=57.74  Aligned_cols=81  Identities=26%  Similarity=0.370  Sum_probs=55.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++++++|+||++++|..+++.+...|++|+.+++++++.+.+.+++   +...   ..|..+.++....+.+...  +++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999999999999999988766554333   3221   2344443122333333221  379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.++|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999999973

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.77  E-value=0.00017  Score=57.65  Aligned_cols=81  Identities=20%  Similarity=0.279  Sum_probs=56.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--Cc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG--FD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g--~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+.  ..   ...|..+.+++...+.+..  -+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999999999999999999999887666543433  11   1234444323333333321  13699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|.++|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99999974

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.77  E-value=7.4e-05  Score=60.41  Aligned_cols=102  Identities=20%  Similarity=0.275  Sum_probs=63.2

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCC
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      +.+.+++++|++||-+|+  |.|..+..+++..|++|++++.|++..+.+++   +.|....+..... ++    ++.. 
T Consensus        54 ~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~----~~~~-  125 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DY----RDLP-  125 (273)
T ss_dssp             HHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--G----GG---
T ss_pred             HHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ec----cccC-
Confidence            445678999999999996  68999999999999999999999998887754   3444321111111 22    1111 


Q ss_pred             CCccEEEe-----CCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFE-----NVGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++||.|+.     .+|.    ..++.+.+.|+|+|+++.-..
T Consensus       126 ~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~i  167 (273)
T PF02353_consen  126 GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQTI  167 (273)
T ss_dssp             -S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEEE
T ss_pred             CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEec
Confidence            26998754     4442    347788899999999986543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.76  E-value=0.00028  Score=60.07  Aligned_cols=107  Identities=18%  Similarity=0.123  Sum_probs=74.6

Q ss_pred             hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHH
Q 024337           65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR  144 (269)
Q Consensus        65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~  144 (269)
                      ...+..+.+..+++++++||.+|+  |.|..+..+++..|++|++++.|++..+.+++.. ...-++.... ++.    +
T Consensus       153 ~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~----~  224 (383)
T PRK11705        153 EAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR----D  224 (383)
T ss_pred             HHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh----h
Confidence            344444555677899999999996  6788889999988999999999999999988443 2111221111 221    1


Q ss_pred             HCCCCccEEEeC-----CCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          145 YFPEGIDVYFEN-----VGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       145 ~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .+.||.|+..     +|.    ..++.+.+.|+|+|.++....
T Consensus       225 l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i  268 (383)
T PRK11705        225 L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI  268 (383)
T ss_pred             c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            1 3479988643     342    357788899999999987643

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.00064  Score=55.17  Aligned_cols=78  Identities=14%  Similarity=0.158  Sum_probs=53.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc----eeEecCChhhHHHHHHHHC--CCCccE
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD----EAFNYKEEADLNAALKRYF--PEGIDV  152 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~----~~~~~~~~~~~~~~i~~~~--~~~~d~  152 (269)
                      +++|+||+|++|..+++.+...|++|+++.++++..+.+.++   .+..    ...|..+.++..+.+.+..  .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999999999887765443222   2322    1346555422222222221  136999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +++++|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999984

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00025  Score=57.74  Aligned_cols=81  Identities=20%  Similarity=0.175  Sum_probs=56.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+..+..   ...|..+.......+++...  +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3578999999999999999999999999999999988877665232221   12355443133333333221  368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999985

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.75  E-value=0.00026  Score=53.83  Aligned_cols=105  Identities=17%  Similarity=0.286  Sum_probs=75.7

Q ss_pred             CCCEEEEecC-cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChh---hHHHHHHHHCCCCccEE
Q 024337           79 HGECVFISAA-SGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEA---DLNAALKRYFPEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga-~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~---~~~~~i~~~~~~~~d~v  153 (269)
                      ....|||.|+ .||+|.+.+.-....|+.|+++.|+-+....+..++|.. +-+|..++.   .+...++..+.|+.|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            3467888876 789999999999999999999999999877766588873 345655541   24455566666799999


Q ss_pred             EeCCCch----h---------------------Hhhh--HhhhhcCCEEEEEecccc
Q 024337          154 FENVGGK----T---------------------LDAV--LPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~----~---------------------~~~~--~~~l~~~G~~v~~g~~~~  183 (269)
                      ++.+|-.    .                     +..+  -.+++..|++|.+|...+
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~  142 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG  142 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence            9988741    1                     1111  224567899999987654

>PRK09186 flagellin modification protein A; Provisional

Probab=97.75  E-value=0.00024  Score=56.99  Aligned_cols=80  Identities=16%  Similarity=0.209  Sum_probs=55.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc---e-eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD---E-AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~---~-~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      ++++++|+|++|++|..++..+...|++|+++++++++.+.+.+++    +..   . ..|..+..++.+.+.+...  +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999887765543333    221   1 2355544233333333221  3


Q ss_pred             CccEEEeCCC
Q 024337          149 GIDVYFENVG  158 (269)
Q Consensus       149 ~~d~vid~~g  158 (269)
                      ++|+++++++
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6899999985

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.00031  Score=56.67  Aligned_cols=83  Identities=23%  Similarity=0.309  Sum_probs=56.4

Q ss_pred             CCCCCEEEEecCcc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCce----eEecCChhhHHHHHHHHC-
Q 024337           77 AKHGECVFISAASG-AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGFDE----AFNYKEEADLNAALKRYF-  146 (269)
Q Consensus        77 ~~~~~~vlI~ga~g-~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~----~g~~~----~~~~~~~~~~~~~i~~~~-  146 (269)
                      +.++++++|+|++| ++|.++++.+...|++|+++++++++.+...+.    ++...    ..|..+..+....+.+.. 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            44578999999986 899999999999999999999887766544322    34322    235544312333333221 


Q ss_pred             -CCCccEEEeCCCc
Q 024337          147 -PEGIDVYFENVGG  159 (269)
Q Consensus       147 -~~~~d~vid~~g~  159 (269)
                       .+++|++|+++|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence             1479999999983

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.73  E-value=0.00027  Score=56.74  Aligned_cols=81  Identities=19%  Similarity=0.311  Sum_probs=55.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+   |.. .  ..|..+..++.+.+.+..  -+++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999889999999999887665443232   221 1  235554323333333321  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00028  Score=56.57  Aligned_cols=80  Identities=14%  Similarity=0.216  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc----eeEecCChhhHHHHHHHHC--CCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYF--PEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~--~~~~d~  152 (269)
                      ++++++|+||+|++|..+++.+...|++|+.++++.+..+... ++...    ...|..+..++...+.+..  -+++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999999999999998877554444 33221    1234444312322232221  136899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      ++.++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999984

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00033  Score=56.23  Aligned_cols=84  Identities=15%  Similarity=0.167  Sum_probs=54.7

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHHc---CC-c-e--eEecCChhhHHHHHHHHC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDK-VDLLKNKF---GF-D-E--AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~-~~~~~~~~---g~-~-~--~~~~~~~~~~~~~i~~~~  146 (269)
                      .+..+++++|+||+|++|...++.+... |++|+++++++++ .+.+.+++   +. . .  .+|..+..+..+.+++..
T Consensus         4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            3567889999999999999999887777 4899999988765 43322122   32 1 1  244444313333333332


Q ss_pred             C-CCccEEEeCCCc
Q 024337          147 P-EGIDVYFENVGG  159 (269)
Q Consensus       147 ~-~~~d~vid~~g~  159 (269)
                      . +++|+++.++|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence            2 479999988874

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00041  Score=55.86  Aligned_cols=79  Identities=23%  Similarity=0.302  Sum_probs=56.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-C--c-eeEecCChhhHHHHHHHHC---CCCccEE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-F--D-EAFNYKEEADLNAALKRYF---PEGIDVY  153 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~--~-~~~~~~~~~~~~~~i~~~~---~~~~d~v  153 (269)
                      ++++|+||+|++|...++.+...|++|++++++.++.+.+.+..+ .  . ...|..+..++.+.+.+..   .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            579999999999999999999999999999999888776653443 1  1 2345555423333333321   3479999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      +.|+|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999984

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.71  E-value=0.00035  Score=58.20  Aligned_cols=80  Identities=15%  Similarity=0.223  Sum_probs=55.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---c-e--eEecCChhhHHHHHHHH--CCCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---D-E--AFNYKEEADLNAALKRY--FPEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~-~--~~~~~~~~~~~~~i~~~--~~~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++..   . .  ..|..+..+....+.+.  ..+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            467899999999999999999998999999999998876655434421   1 1  23544431233333332  12369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|+++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999988

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00027  Score=55.97  Aligned_cols=81  Identities=21%  Similarity=0.282  Sum_probs=56.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---ce--eEecCChhhHHHHHHHHC--CCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DE--AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~~--~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+..   .+  ..|..+..++.+.+++..  .+++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999988899999999988776655434431   11  234444323333343322  13699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|++.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99999874

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.70  E-value=0.00069  Score=50.70  Aligned_cols=98  Identities=21%  Similarity=0.339  Sum_probs=69.3

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHHHHHHHCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~i~~~~~~  148 (269)
                      .++++++.++=.|+  |.|..+++++... ..+||+++++++..+..++   +||.+.  ++..+.    .+.+.+..  
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A----p~~L~~~~--  101 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA----PEALPDLP--  101 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc----hHhhcCCC--
Confidence            57899999999997  6688888888544 3499999999998776543   677653  333332    23333211  


Q ss_pred             CccEEEeCCCc---hhHhhhHhhhhcCCEEEEEec
Q 024337          149 GIDVYFENVGG---KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+|.+|=--|.   ..++.++..|+++|++|.-..
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence            58988855443   578899999999999986533

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00047  Score=54.10  Aligned_cols=78  Identities=19%  Similarity=0.210  Sum_probs=56.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      ++++|+|++|++|..+++.+...|++|+.++++.+..+.++ ..+.. ...|..+.+++...+....++++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            47899999999999999988888999999999888777766 55543 23455554133332223333379999998874

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.0005  Score=54.60  Aligned_cols=81  Identities=16%  Similarity=0.253  Sum_probs=55.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-c---eeEecCC---h--hhHHHHHHHHC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-D---EAFNYKE---E--ADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~-~---~~~~~~~---~--~~~~~~i~~~~  146 (269)
                      ++++++|+|++|++|...++.+...|++|+++++++++.+.+.+++   +. .   ..+|..+   .  ..+.+.+.+..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999988766543332   21 1   1233321   1  02233344434


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      ++++|.+|.++|.
T Consensus        85 ~~~id~vi~~ag~   97 (239)
T PRK08703         85 QGKLDGIVHCAGY   97 (239)
T ss_pred             CCCCCEEEEeccc
Confidence            3478999999983

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00043  Score=55.64  Aligned_cols=80  Identities=23%  Similarity=0.206  Sum_probs=55.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----c-eeEecCChhhHHHHHHHHCC--CCccE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----D-EAFNYKEEADLNAALKRYFP--EGIDV  152 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~-~~~~~~~~~~~~~~i~~~~~--~~~d~  152 (269)
                      +.+++|+|++|++|...++.+...|++|++++++.++.+.+.+.+..    . ...|..+..++.+.+.+...  +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            46899999999999999999999999999999988877665433321    1 12455443233333333221  36899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +++++|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9999873

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.70  E-value=0.00013  Score=58.53  Aligned_cols=110  Identities=20%  Similarity=0.240  Sum_probs=77.6

Q ss_pred             hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHH
Q 024337           65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAA  141 (269)
Q Consensus        65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~  141 (269)
                      ..+...+....+++||+++|=+|.  |.|.+++..|+.+|++|++++-|+++.+.+++   +.|...-+...-. ++   
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~---  131 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DY---  131 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-cc---
Confidence            445555667789999999999996  78999999999999999999999998887764   3344311100000 11   


Q ss_pred             HHHHCCCCccEEE-----eCCCc----hhHhhhHhhhhcCCEEEEEeccc
Q 024337          142 LKRYFPEGIDVYF-----ENVGG----KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       142 i~~~~~~~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                       ++. .+.||-|+     +.+|.    .-+..+.+.|+++|++++.....
T Consensus       132 -rd~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         132 -RDF-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             -ccc-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence             111 12478664     45564    35788999999999999887654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.70  E-value=0.0012  Score=50.79  Aligned_cols=78  Identities=22%  Similarity=0.266  Sum_probs=54.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----Cce-eEecCChhhHHHHHHHHCCCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ++.+++|+|++|++|..++..+...|++|+++.|+.++.+.+.+.+.    ... ..+..+..+..+.+.     ++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence            57899999999999999999988889999999999887766553442    221 223332212233332     48999


Q ss_pred             EeCCCchh
Q 024337          154 FENVGGKT  161 (269)
Q Consensus       154 id~~g~~~  161 (269)
                      |.+++...
T Consensus       102 i~at~~g~  109 (194)
T cd01078         102 FAAGAAGV  109 (194)
T ss_pred             EECCCCCc
Confidence            99988533

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.69  E-value=0.00044  Score=52.37  Aligned_cols=89  Identities=22%  Similarity=0.274  Sum_probs=64.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.+.+|.|+|. |.+|..++++++.+|++|++.+++........ ..+..    +.   ++.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhhh
Confidence            46899999998 99999999999999999999999877666343 44431    11   44555554     79999988


Q ss_pred             Cc-h-----hHhhhHhhhhcCCEEEEEec
Q 024337          158 GG-K-----TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~-~-----~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +. .     .-...+..|+++..+|.++.
T Consensus       100 plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             ccccccceeeeeeeeeccccceEEEeccc
Confidence            73 1     12467888998888888755

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06484 short chain dehydrogenase; Validated

Probab=97.69  E-value=0.0003  Score=62.71  Aligned_cols=81  Identities=22%  Similarity=0.323  Sum_probs=59.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      ++++++|+|+++++|..+++.+...|++|+.++++.++.+.+.++++..   ..+|..+..++.+.+.+...  +++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999999999999999999988877665466643   23455554233333333221  379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            999873

>PRK06194 hypothetical protein; Provisional

Probab=97.69  E-value=0.00028  Score=57.71  Aligned_cols=80  Identities=19%  Similarity=0.288  Sum_probs=54.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      +.++||+||+|++|..+++.+...|++|++++++.++.+...+++   +...   ..|..+.+++.+.+.+..  .+++|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999998876655443233   3221   234444312322232221  13689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        86 ~vi~~Ag~   93 (287)
T PRK06194         86 LLFNNAGV   93 (287)
T ss_pred             EEEECCCC
Confidence            99999984

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.69  E-value=0.00033  Score=56.41  Aligned_cols=82  Identities=16%  Similarity=0.293  Sum_probs=62.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc---eeEecCChhhHHHHHHHHCCC-C
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD---EAFNYKEEADLNAALKRYFPE-G  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~i~~~~~~-~  149 (269)
                      +.|++.+|.|||.|+|.+-+.=+..+|.+|+.+.|++++++.++++.    +..   .++|..++....+.+++.+.+ .
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~  126 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD  126 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence            34699999999999998766666669999999999999987665433    331   367887762336667776666 8


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +-+.++++|-
T Consensus       127 VgILVNNvG~  136 (312)
T KOG1014|consen  127 VGILVNNVGM  136 (312)
T ss_pred             eEEEEecccc
Confidence            8899999994

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.0003  Score=56.40  Aligned_cols=80  Identities=19%  Similarity=0.252  Sum_probs=54.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-ee--EecCChhhHHHHHHHHCC--CCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      +++++|.|+++++|...++.+...|++|++++++.++.+.+.+.+   +.. ..  .|..+.+++...+.+...  +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999999999999999887665544232   221 12  344443233333333221  3689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK05717 oxidoreductase; Validated

Probab=97.68  E-value=0.0004  Score=55.76  Aligned_cols=81  Identities=16%  Similarity=0.235  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+|++|++|..++..+...|++|+.++++.++.+.+.+.++..   ...|..+..+....+.+...  +++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999999999999988876655543244432   13444443123232333221  368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |.++|.
T Consensus        89 i~~ag~   94 (255)
T PRK05717         89 VCNAAI   94 (255)
T ss_pred             EECCCc
Confidence            999984

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.68  E-value=0.00033  Score=56.41  Aligned_cols=78  Identities=23%  Similarity=0.276  Sum_probs=54.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      +++|+|+++++|..+++.+...|++|+.+++++++.+.+.+++   +...  ..|..+.++..+.+.+..  -+++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899999999999999999999999999999987765544333   2112  234444323333333322  13799999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +++|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            99883

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.67  E-value=0.00047  Score=55.14  Aligned_cols=78  Identities=19%  Similarity=0.333  Sum_probs=55.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEEEeC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVYFEN  156 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~vid~  156 (269)
                      +++|.|++|++|...+..+...|++|+++++++++.+.+.+.++...   ..|..+.+++.+.+.+...  +++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999999887776653444321   2344443233333333221  369999998


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            873

>PRK06128 oxidoreductase; Provisional

Probab=97.67  E-value=0.00071  Score=55.78  Aligned_cols=104  Identities=19%  Similarity=0.249  Sum_probs=65.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHHcCCce---eEecCChhhHHHHHHHHC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVD----LLKNKFGFDE---AFNYKEEADLNAALKRYF--P  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~----~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~  147 (269)
                      .++++||+||++++|..+++.+...|++|+++.++.+  +.+    .++ ..+...   ..|..+..+..+.+.+..  -
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999988875432  122    222 334321   234444312333333322  1


Q ss_pred             CCccEEEeCCCc----h-----------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          148 EGIDVYFENVGG----K-----------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       148 ~~~d~vid~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +++|++|+++|.    .                       .++.+++.++++|+++.++....
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence            369999999983    1                       12334555567789998876543

>PLN02253 xanthoxin dehydrogenase

Probab=97.67  E-value=0.00046  Score=56.24  Aligned_cols=81  Identities=15%  Similarity=0.177  Sum_probs=55.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c---eeEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D---EAFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~---~~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++++..+.+.++++.  .   ...|..+..+..+.+.+...  +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999988999999999887765554434432  1   13455554233332332211  3699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99999873

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00035  Score=55.27  Aligned_cols=81  Identities=12%  Similarity=0.140  Sum_probs=53.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce-eEecCChhhHHHHHHHHCC--CCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE-AFNYKEEADLNAALKRYFP--EGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~  152 (269)
                      +++++||+|++|++|..+++.+...|++|++++++.++.....+.   .+... ..|..+.+++...+.+...  +++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            378999999999999999999988999999999877653322112   22221 2344443133332332211  37999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +++++|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9998873

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00034  Score=56.90  Aligned_cols=80  Identities=23%  Similarity=0.315  Sum_probs=54.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+|++|++|..++..+...|++|+++++++++.+.+.+++   +...   ..|..+..++.+.+.+..  -+++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999998877665443233   3221   234444313333332221  1368


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|+++|
T Consensus        85 d~li~nAg   92 (275)
T PRK05876         85 DVVFSNAG   92 (275)
T ss_pred             CEEEECCC
Confidence            99999998

>PRK08589 short chain dehydrogenase; Validated

Probab=97.66  E-value=0.00036  Score=56.63  Aligned_cols=80  Identities=21%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+||++++|..+++.+...|++|++++++ ++.+.+.+++   +..   ...|..+..+....+.+..  -+++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999999999988 4443322133   221   2345555423333333322  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK09242 tropinone reductase; Provisional

Probab=97.65  E-value=0.00036  Score=56.08  Aligned_cols=81  Identities=22%  Similarity=0.309  Sum_probs=55.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCce---eEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+.+++     +...   ..|..+..+....+.+..  -+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999888765544333     2111   234444312333233221  13


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.65  E-value=0.00046  Score=54.68  Aligned_cols=79  Identities=16%  Similarity=0.190  Sum_probs=53.8

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCCce-eEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGFDE-AFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      +++++|+|+++++|..+++.+...|++|+++++++++. +.++ ..+... ..|..+..+....+.+...  +++|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            46899999999999999999999999999999876543 3333 445422 2344443133333333322  36999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        81 ~ag~   84 (236)
T PRK06483         81 NASD   84 (236)
T ss_pred             CCcc
Confidence            9873

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.65  E-value=0.00048  Score=55.32  Aligned_cols=81  Identities=17%  Similarity=0.258  Sum_probs=56.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      .+++++|+|++|++|..+++.+...|++|+.++++.++.+.+.+.++.. .  ..|..+..+....+.+..  -+++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999999999999999988776665454432 1  234444313333333221  1368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      +.++|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998873

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.64  E-value=0.00045  Score=56.17  Aligned_cols=104  Identities=12%  Similarity=0.132  Sum_probs=69.3

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||+  +|+|.++++.+...|++|+.++++++   +.+.+.++++..  ...|..+.++....+.+...  ++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999996  79999999999999999999988753   333333244532  23455554233333333322  47


Q ss_pred             ccEEEeCCCc-h-----------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGG-K-----------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++++++|. .                             ..+..++.|.++|+++.++...
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            9999999983 1                             0244566677789999887644

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00035  Score=57.79  Aligned_cols=80  Identities=21%  Similarity=0.258  Sum_probs=54.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc-e--eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++     +.. .  ..|..+.++....+.+...  +
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            5689999999999999999999889999999999877654432222     111 1  2344443133333333321  3


Q ss_pred             CccEEEeCCC
Q 024337          149 GIDVYFENVG  158 (269)
Q Consensus       149 ~~d~vid~~g  158 (269)
                      ++|++|.++|
T Consensus        95 ~iD~li~nAg  104 (306)
T PRK06197         95 RIDLLINNAG  104 (306)
T ss_pred             CCCEEEECCc
Confidence            6999999997

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00053  Score=55.31  Aligned_cols=81  Identities=23%  Similarity=0.361  Sum_probs=55.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c-e--eEecCChhhHHHHHHHHC-CCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEADLNAALKRYF-PEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~-~~~~d~  152 (269)
                      ++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++..  . .  ..|..+.++......... .+++|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            467899999999999999999999999999999998877666534311  1 1  234444312222222211 247899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      ++.++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999884

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00052  Score=55.05  Aligned_cols=75  Identities=19%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHCCCCccEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      +.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+   ..+..   ...|..+. +   .+.+...+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-I---DRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-H---HHHHHhcCCCCEE
Confidence            4689999999999999999999999999999998776655442   22222   12354443 2   2333333479999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      |+++|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99988

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00047  Score=55.10  Aligned_cols=81  Identities=16%  Similarity=0.191  Sum_probs=54.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+.+++|+|++|++|..+++.+...|++|++++++++..+.+.+.+   +..   ...|..+..+....+.+..  .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999889999999999876654443222   211   1344444312222222221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999983

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00063  Score=54.72  Aligned_cols=79  Identities=23%  Similarity=0.345  Sum_probs=55.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-e--eEecCChhhHHHHHHHHCCCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ++++++|.|+++++|..+++.+...|++|+++++++++.+.+.+++    +.. .  ..|..+..+..+.+.+.  +++|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence            4689999999999999999999999999999999888766544233    221 1  23444431333333322  4799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +++++.|.
T Consensus        84 ~lv~~ag~   91 (259)
T PRK06125         84 ILVNNAGA   91 (259)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00043  Score=54.66  Aligned_cols=80  Identities=11%  Similarity=0.150  Sum_probs=55.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHH---CCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRY---FPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~---~~~~  149 (269)
                      ++++++|.|+++++|.+.+..+...|++|+.+.+++++.+.+.+++   +.. .  ..|..+.++..+.+.+.   .+++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999888766543222   332 1  23444431333233322   2226


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++++++|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999996

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00043  Score=55.44  Aligned_cols=80  Identities=19%  Similarity=0.307  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++.+++|.||+|++|...++.+...|++|+.++++.++.+.+.+++   +.. .  ..|..+..+....+.+...  +++
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999999999877665544332   221 1  2344443123333333221  368


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++++++|
T Consensus        87 d~li~~ag   94 (252)
T PRK07035         87 DILVNNAA   94 (252)
T ss_pred             CEEEECCC
Confidence            99999987

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.61  E-value=0.00051  Score=54.82  Aligned_cols=80  Identities=18%  Similarity=0.255  Sum_probs=53.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      ++++++|+||+|++|..+++.+...|++|+.+++++..  .+.++ +.+..   ...|..+..++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999987531  22233 44432   12344443233333333221  3699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.61  E-value=0.00046  Score=55.13  Aligned_cols=80  Identities=15%  Similarity=0.278  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++++++|+|++|++|..+++.+...|++|+.+++++++.+.+.++   .+..   ...|..+.++..+.+.....  +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999988765544322   2332   12343333123333333221  368


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |.+|+++|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK06720 hypothetical protein; Provisional

Probab=97.61  E-value=0.00058  Score=51.19  Aligned_cols=81  Identities=14%  Similarity=0.247  Sum_probs=53.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++..++|.||++++|...+..+...|++|++++++.++.+...+++   +.. .  ..|..+..++.+.+.+..  -+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999889999999998877654432232   332 1  234333212233222211  1378


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        95 DilVnnAG~  103 (169)
T PRK06720         95 DMLFQNAGL  103 (169)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00043  Score=55.45  Aligned_cols=81  Identities=16%  Similarity=0.201  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|.|++|++|..+++.+...|++|+.+++++++.+.+.+   ..+.. .  ..|..+..++...+.+..  -+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999876544332   22322 1  234444312223222221  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.61  E-value=0.0012  Score=53.23  Aligned_cols=98  Identities=21%  Similarity=0.223  Sum_probs=74.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC--
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV--  157 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~--  157 (269)
                      ..+|.|+|+ |-+|.-++++|-.+|++|...+.+.+|++.+.+.++..-..-+++...+.+.+.     +.|++|.++  
T Consensus       168 ~~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI  241 (371)
T COG0686         168 PAKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI  241 (371)
T ss_pred             CccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence            345677788 999999999999999999999999999999987777652222333325555555     479998866  


Q ss_pred             -Cc----hhHhhhHhhhhcCCEEEEEecccc
Q 024337          158 -GG----KTLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       158 -g~----~~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                       |.    -..++.++.|+|++.++.+....+
T Consensus       242 pgakaPkLvt~e~vk~MkpGsVivDVAiDqG  272 (371)
T COG0686         242 PGAKAPKLVTREMVKQMKPGSVIVDVAIDQG  272 (371)
T ss_pred             cCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence             22    246778999999999999876544

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00058  Score=55.49  Aligned_cols=79  Identities=27%  Similarity=0.325  Sum_probs=55.8

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      .++||+||+|++|..+++.+...|.+|+++.+++++.+.+++..+..   ...|..+..++.+.+.+..  .+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999999999999999999889999999999988877665343322   1345444313333333322  136899999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9874

>PRK08643 acetoin reductase; Validated

Probab=97.61  E-value=0.00042  Score=55.60  Aligned_cols=80  Identities=14%  Similarity=0.164  Sum_probs=54.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      +++++|+|++|++|..+++.+...|++|+.++++.++.+.+...+   +..   ...|..+.....+.+.+..  -+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999887665544232   221   1234444312333333321  13699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|.++|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999974

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.60  E-value=0.00052  Score=55.19  Aligned_cols=81  Identities=21%  Similarity=0.339  Sum_probs=55.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+.+.+   +..   ...|..+..++...+.+...  +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999887765544222   221   13355443133222222211  368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |.++.++|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.60  E-value=0.00058  Score=55.46  Aligned_cols=80  Identities=13%  Similarity=0.145  Sum_probs=53.5

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKV---DLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~~---~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||++  |+|.++++.+...|++|++++++++..   +.+.+++|...  ..|..+..+....+.+...  ++
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            478999999986  999999999999999999998765322   23322445322  2355554233333333221  47


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++++++|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            999999998

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.00034  Score=56.69  Aligned_cols=78  Identities=19%  Similarity=0.363  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+...   +.. ...|..+..++.+.+.+..  -+++|++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            3568999999999999999999999999999998876543322   222 2345555423444344332  136999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      |+|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9984

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.00043  Score=55.32  Aligned_cols=81  Identities=15%  Similarity=0.178  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCc-e--eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~--~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      ++.+++|.||+|++|..+++.+...|++|+.++++.++.+...+.+  +.. .  ..|..+..+..+.+.+...  +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999999988888999999999887665544233  221 1  2344443123333332211  3799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +++.++|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999984

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.58  E-value=0.00051  Score=55.06  Aligned_cols=81  Identities=21%  Similarity=0.349  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .++++||+||++++|..+++.+...|++|+.+++++++.+.+.+++   +.. .  ..|..+..++...+.+..  -+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999999999999999999877665443233   221 1  234444312333332221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.++|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999984

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=97.58  E-value=0.001  Score=53.92  Aligned_cols=153  Identities=18%  Similarity=0.172  Sum_probs=92.9

Q ss_pred             CCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHH
Q 024337           18 PEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLV   96 (269)
Q Consensus        18 ~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~   96 (269)
                      ..++.|++.+...+|.+|..-.....++++|.   +.|   ..... .|...||... ..++++++++=+|.  |.|.++
T Consensus       107 ~P~rig~~f~I~Psw~~~~~~~~~~~i~lDPG---lAF---GTG~H-pTT~lcL~~Le~~~~~g~~vlDvGc--GSGILa  177 (300)
T COG2264         107 HPVRIGERFVIVPSWREYPEPSDELNIELDPG---LAF---GTGTH-PTTSLCLEALEKLLKKGKTVLDVGC--GSGILA  177 (300)
T ss_pred             CcEEeeeeEEECCCCccCCCCCCceEEEEccc---ccc---CCCCC-hhHHHHHHHHHHhhcCCCEEEEecC--ChhHHH
Confidence            44677888888888888754434566777443   443   12222 2333344333 23679999999996  567777


Q ss_pred             HHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc----hhHhhhHhhhhc
Q 024337           97 GQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG----KTLDAVLPNMKI  171 (269)
Q Consensus        97 i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~----~~~~~~~~~l~~  171 (269)
                      |..+| +|+ +|++++-.+...+.++++.-...+-..... ..........+++||+|+-+.=.    .......+.+++
T Consensus       178 IAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~-~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkp  255 (300)
T COG2264         178 IAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQA-KGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKP  255 (300)
T ss_pred             HHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhc-ccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCC
Confidence            77666 577 799999888877776643322111100000 00111111222489999877632    456778889999


Q ss_pred             CCEEEEEecc
Q 024337          172 RGRIAACGMI  181 (269)
Q Consensus       172 ~G~~v~~g~~  181 (269)
                      +|++++.|..
T Consensus       256 gg~lIlSGIl  265 (300)
T COG2264         256 GGRLILSGIL  265 (300)
T ss_pred             CceEEEEeeh
Confidence            9999998874

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00057  Score=54.53  Aligned_cols=79  Identities=19%  Similarity=0.297  Sum_probs=54.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +++++|+||+|++|...++.+...|++|+++++++++.+.+.+.+     +.. .  ..|..+.+++.+.+.+..  -++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999889999999999988766543222     211 1  235554423333333322  136


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|.++|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999997

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.57  E-value=0.00047  Score=55.30  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=55.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHcCC--ceeEecCChhhHHHHHHHHCC--CC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV----DLLKNKFGF--DEAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~----~~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      -.|+.|||+||++|+|.+.++=+..+|++++..+.+++..    +..+ +.|-  .+..|.++.++.....++...  |.
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            3589999999999999999998888999888888665533    3344 3342  245666654344433333322  27


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++.+|-
T Consensus       115 V~ILVNNAGI  124 (300)
T KOG1201|consen  115 VDILVNNAGI  124 (300)
T ss_pred             ceEEEecccc
Confidence            9999999984

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.00063  Score=54.07  Aligned_cols=82  Identities=17%  Similarity=0.238  Sum_probs=55.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ..+++++|.|++|++|..++..+...|.+|+++++++++.+.+.+.+   +.. .  ..|..+..++...+.+...  ++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999887665544222   221 1  2344443133333333221  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|+++.++|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            9999999984

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.00078  Score=54.77  Aligned_cols=80  Identities=25%  Similarity=0.255  Sum_probs=55.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      +.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+.++.. .  ..|..+..++...+.+..  -+++|.++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999999888999999999988776665343321 1  234444313333333221  13689999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      .|+|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99984

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00056  Score=55.72  Aligned_cols=79  Identities=15%  Similarity=0.266  Sum_probs=54.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---e--eEecCChhhHHHHHHHHC--CCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---E--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +++++|+||+|++|...++.+...|++|++++++.++.+.+.+.   .+.+   .  ..|..+.+++.. +.+..  -++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            56899999999999999999999999999999988766554322   2211   1  235555423333 43332  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|+++.|+|.
T Consensus        82 id~vv~~ag~   91 (280)
T PRK06914         82 IDLLVNNAGY   91 (280)
T ss_pred             eeEEEECCcc
Confidence            8999999874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.55  E-value=0.00049  Score=55.69  Aligned_cols=82  Identities=18%  Similarity=0.338  Sum_probs=57.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc------eeEecCChhhH---HHHHHHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEADL---NAALKRY  145 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~------~~~~~~~~~~~---~~~i~~~  145 (269)
                      -.++.++|+|++.|+|.+++..+...|++|+.+.+++++.+...+.+   +..      ...|..+.++.   .+...+.
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999876554332   221      23344433122   2222333


Q ss_pred             CCCCccEEEeCCCc
Q 024337          146 FPEGIDVYFENVGG  159 (269)
Q Consensus       146 ~~~~~d~vid~~g~  159 (269)
                      ..+++|++++++|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            34589999999984

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.55  E-value=0.00074  Score=54.13  Aligned_cols=80  Identities=16%  Similarity=0.247  Sum_probs=53.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++++++|+||++++|.++++.+...|++|+++.+++..  .+.++ +.+..   ...|..+.++..+.+.+..  -+++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999998875432  22333 44432   1345555423333333322  13799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        86 ~lv~~ag~   93 (251)
T PRK12481         86 ILINNAGI   93 (251)
T ss_pred             EEEECCCc
Confidence            99999883

>PRK07985 oxidoreductase; Provisional

Probab=97.54  E-value=0.0012  Score=54.33  Aligned_cols=105  Identities=12%  Similarity=0.113  Sum_probs=66.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      ++++++|+||++++|..+++.+...|++|+++.++.  ++.+.+.+   ..+..   ...|..+..+....+.+..  -+
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567999999999999999999999999999887542  23333321   22322   1234444313333333322  13


Q ss_pred             CccEEEeCCCch---------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          149 GIDVYFENVGGK---------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++|+++.++|..                           .++.+++.++.+|+++.++....
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~  189 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence            789999988731                           02345555667789998876543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.54  E-value=0.0007  Score=54.46  Aligned_cols=79  Identities=25%  Similarity=0.249  Sum_probs=53.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++...+... ++   +..   ...|..+.++..+.+.+..  -+++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999998754322222 32   322   1345555313333333322  1369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |+++.++|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999997

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00084  Score=54.55  Aligned_cols=80  Identities=11%  Similarity=0.102  Sum_probs=54.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----Cc-ee--EecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-----FD-EA--FNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-----~~-~~--~~~~~~~~~~~~i~~~~~--~  148 (269)
                      ++++++|+|++|++|..+++.+...|++|+.+++++++.+...+++.     .. ..  .|..+..+....+.+...  +
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999999999998776544332321     11 12  244443133333333221  3


Q ss_pred             CccEEEeCCC
Q 024337          149 GIDVYFENVG  158 (269)
Q Consensus       149 ~~d~vid~~g  158 (269)
                      ++|++|.++|
T Consensus        86 ~~d~li~~ag   95 (276)
T PRK05875         86 RLHGVVHCAG   95 (276)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.54  E-value=0.00069  Score=55.04  Aligned_cols=82  Identities=13%  Similarity=0.192  Sum_probs=54.4

Q ss_pred             CCCCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--
Q 024337           77 AKHGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        77 ~~~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~---~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~--  147 (269)
                      +-.+++++|+||+  +++|.++++.+...|++|+.+.+++   ++.+.+.++++..  ...|..+.++..+.+.+...  
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            3457899999996  7999999999999999999888764   3344443344532  23454443233333333221  


Q ss_pred             CCccEEEeCCC
Q 024337          148 EGIDVYFENVG  158 (269)
Q Consensus       148 ~~~d~vid~~g  158 (269)
                      +++|++++++|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            37999999987

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.53  E-value=0.00059  Score=54.73  Aligned_cols=80  Identities=13%  Similarity=0.086  Sum_probs=53.2

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc----eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||+  +++|.++++.+...|++|+.++++++..+.++ ++...    ...|..+.++..+.+.+...  +++
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999998  79999999999999999999988744333333 33221    12454443233333333221  479


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        85 D~lv~nAg~   93 (252)
T PRK06079         85 DGIVHAIAY   93 (252)
T ss_pred             CEEEEcccc
Confidence            999999873

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00072  Score=54.48  Aligned_cols=80  Identities=20%  Similarity=0.307  Sum_probs=53.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      +.+++|.||+|++|..+++.+...|++|+++++++++.+.+.+.+   +..   ...|..+...+...+.+...  +++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357999999999999999999999999999999877655433222   322   12344443133333333211  3689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +++.|+|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00096  Score=53.55  Aligned_cols=80  Identities=21%  Similarity=0.266  Sum_probs=55.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc--e--eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      +++++|+||+|++|..++..+...|++|++++++.++.+.+.+.+...  +  ..|..+.+++...+.+..  -+++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            568999999999999999999889999999999888766554343211  1  234444322333333321  1368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      +.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999974

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0016  Score=53.51  Aligned_cols=106  Identities=19%  Similarity=0.222  Sum_probs=65.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      -++.+++|+||+|++|..++..+...|++|+++.++.++ .+.+.+   ..+...   ..|..+.+.+.+.+.+..  -+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999998899999999876432 222221   223221   234444312333333221  13


Q ss_pred             CccEEEeCCCch----h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          149 GIDVYFENVGGK----T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++|++|.++|..    .                       .+.+++.+++.|++|.++....
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~  185 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG  185 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            689999988741    0                       1233445566789998876443

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0016  Score=52.06  Aligned_cols=105  Identities=16%  Similarity=0.210  Sum_probs=64.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHc---CCce---eEecCChhh---HHHHHHHH---
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNKF---GFDE---AFNYKEEAD---LNAALKRY---  145 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~~---g~~~---~~~~~~~~~---~~~~i~~~---  145 (269)
                      .+++++|+|+++++|..+++.+...|++|+++. +++++.+.+.+++   +...   ..|..+..+   +.+.+.+.   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            468999999999999999999999999998875 4545443322122   2211   123333211   22222221   


Q ss_pred             -CC-CCccEEEeCCCch---h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          146 -FP-EGIDVYFENVGGK---T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       146 -~~-~~~d~vid~~g~~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                       .+ +++|++++++|..   .                       .+.+++.++..|+++.++....
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence             12 2799999999831   0                       1235556667799998877554

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.52  E-value=0.0041  Score=49.47  Aligned_cols=174  Identities=18%  Similarity=0.185  Sum_probs=98.4

Q ss_pred             cCc--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHcCCce-eEecCChhh---HHHHHHHHCCCCccEEEeC
Q 024337           87 AAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK----VDLLKNKFGFDE-AFNYKEEAD---LNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        87 ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~----~~~~~~~~g~~~-~~~~~~~~~---~~~~i~~~~~~~~d~vid~  156 (269)
                      |++  +++|.++++.+...|++|++++++.++    .+.+.++.+... ..|..+..+   +.+.+.+..++++|+++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            455  899999999999999999999999887    344443566442 234444312   2233333343689999988


Q ss_pred             CCc--h-----h-----------------------HhhhHhhhhcCCEEEEEeccccccCCCCCCccc------------
Q 024337          157 VGG--K-----T-----------------------LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN------------  194 (269)
Q Consensus       157 ~g~--~-----~-----------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~------------  194 (269)
                      +|.  .     .                       .+.+.+.++++|+++.++...............            
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~  160 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS  160 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence            763  1     0                       245666788899999987654321111110000            


Q ss_pred             -hHHHhh-cceeeeeeeecccccchHHHH---HHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCC---CcceEE
Q 024337          195 -LMYLVS-KRLRMEGFIVLDHYHLYPKFL---EMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQ---NVGKQV  263 (269)
Q Consensus       195 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~---~~gkvv  263 (269)
                       -.++-. +++++.....+.......+.+   ++..+.+.+   ..+..+....+|+.++...|.+..   ..|.++
T Consensus       161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~---~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i  234 (241)
T PF13561_consen  161 LAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKK---RIPLGRLGTPEEVANAVLFLASDAASYITGQVI  234 (241)
T ss_dssp             HHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHH---HSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred             HHHHhccccCeeeeeecccceeccchhccccccchhhhhhh---hhccCCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence             012334 577777666554432222222   222222222   122223346778889988887643   445443

...

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.51  E-value=0.001  Score=52.85  Aligned_cols=80  Identities=20%  Similarity=0.320  Sum_probs=54.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce-e--EecCChhhHHHHHHHHCC--CCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      +.+++|+|++|++|...++.+...|.+|+++.+++++.+...+.   .+... .  .|..+..++.+.+.+...  +++|
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD   84 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            57899999999999999999999999999999988775544322   23221 1  344443233333333211  3689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      .++.++|.
T Consensus        85 ~vi~~ag~   92 (246)
T PRK05653         85 ILVNNAGI   92 (246)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.50  E-value=0.0007  Score=55.08  Aligned_cols=80  Identities=15%  Similarity=0.250  Sum_probs=54.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..+....+.+...  +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999877665443232   221 1  2344443123333332221  379


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|.++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00069  Score=54.44  Aligned_cols=80  Identities=14%  Similarity=0.152  Sum_probs=54.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++.+++|+||+|++|..+++.+...|++|+++++++++.+..+ ++   +..   ...|..+.++....+.+..  -+++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999999999999998877654433 32   322   1334444323333333322  1379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999983

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.50  E-value=0.0026  Score=49.32  Aligned_cols=104  Identities=16%  Similarity=0.208  Sum_probs=75.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCceeEe-cCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDEAFN-YKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~~~~-~~~~~~~~~~i~~~~  146 (269)
                      ..++.+..++||=.|  +++|+.++.+|..+.  .+++.+.+++++.+.+++.   .|.+..+. .... +..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence            456778889999888  688999999999886  4899999999998887753   45544221 1112 4455555533


Q ss_pred             CCCccEEE-eCCCc---hhHhhhHhhhhcCCEEEEEe
Q 024337          147 PEGIDVYF-ENVGG---KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       147 ~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .+.||+|| |+.-.   ..++.++++|++||.++.=.
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            45899774 55544   67899999999999887643

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.50  E-value=0.0014  Score=55.17  Aligned_cols=94  Identities=17%  Similarity=0.150  Sum_probs=68.2

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC---Cc-eeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFG---FD-EAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g---~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+|||.|+ |++|..+++.+.+.| .+|++.+|+.++.+.+. ...   .. ..+|..+.....+.++     ++|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence            57899999 999999999988888 69999999999988887 443   22 3556554313333333     3699999


Q ss_pred             CCCc-hhHhhhHhhhhcCCEEEEEecc
Q 024337          156 NVGG-KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       156 ~~g~-~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |.+. ..+..+-.+++.+=.++.....
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~~  101 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSYY  101 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEcccC
Confidence            9997 4554455666777778777653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.50  E-value=0.00093  Score=55.50  Aligned_cols=80  Identities=14%  Similarity=0.164  Sum_probs=55.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCc----e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFD----E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~----~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      +++++|+|+++++|..+++.+...| ++|+.+++++++.+.+.++++..    .  ..|..+..+....+.+..  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            6789999999999999999988899 89999999988776554354321    1  235544312333333321  2379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.50  E-value=0.00073  Score=53.62  Aligned_cols=81  Identities=19%  Similarity=0.272  Sum_probs=54.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+.+++|.|++|++|..++..+...|++|+++++++++.+...+++   +.. .  ..|..+..++.+.+++..  -+++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3578999999999999999999889999999999877654432222   221 1  233433313333333322  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999999874

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.0011  Score=53.07  Aligned_cols=74  Identities=26%  Similarity=0.363  Sum_probs=50.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++. ..+... . +...  ..|..+. +   .+.+.. +++|++++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~-~~~~~~~~D~~~~-~---~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E-SPNEWIKWECGKE-E---SLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c-CCCeEEEeeCCCH-H---HHHHhc-CCCCEEEE
Confidence            3689999999999999999999999999999998762 222211 1 1111  2344433 2   222322 36999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9974

>PRK04148 hypothetical protein; Provisional

Probab=97.50  E-value=0.0017  Score=46.14  Aligned_cols=90  Identities=14%  Similarity=0.094  Sum_probs=58.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec-CChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY-KEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .++.++++.|. | .|...++.++..|.+|++++.+++..+.++ +.+.+.+.+. -++ ++  .+-    +++|+++.+
T Consensus        15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~y----~~a~liysi   84 (134)
T PRK04148         15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EIY----KNAKLIYSI   84 (134)
T ss_pred             ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HHH----hcCCEEEEe
Confidence            45688999997 5 887667777788999999999999999888 7776543321 111 11  111    258888888


Q ss_pred             CCchhHh-hhHhhhhc-CCEEEE
Q 024337          157 VGGKTLD-AVLPNMKI-RGRIAA  177 (269)
Q Consensus       157 ~g~~~~~-~~~~~l~~-~G~~v~  177 (269)
                      -....++ ..+++-++ +..++.
T Consensus        85 rpp~el~~~~~~la~~~~~~~~i  107 (134)
T PRK04148         85 RPPRDLQPFILELAKKINVPLII  107 (134)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEE
Confidence            8874444 33443333 344444

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.49  E-value=0.00099  Score=53.73  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=52.7

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++  |+|.++++.+...|++|+.+++++.   ..+.+.++.+...  ..|..+..+....+.+...  ++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            568999999986  8999999999889999999887642   2233332334322  3455554233333333322  37


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++++++|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999887

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.49  E-value=0.0011  Score=53.18  Aligned_cols=81  Identities=19%  Similarity=0.271  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+|++|++|...++.+...|.+|+++++++++.+.+.+.+   +..   ...|..+..++.+.+.+..  .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3579999999999999999999889999999999887665443232   322   1234444323333333221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0017  Score=51.60  Aligned_cols=77  Identities=21%  Similarity=0.289  Sum_probs=52.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-Cc-eeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FD-EAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+++|+||+|++|...+..+...|++|+++++++++.+.+.+... .. ...|..+..++.+.+.+. ....|.++.++|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcCc
Confidence            579999999999999999888899999999999887776652221 11 234555542333333332 224677776665

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0032  Score=50.39  Aligned_cols=81  Identities=16%  Similarity=0.219  Sum_probs=52.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHH---C--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRY---F--  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~---~--  146 (269)
                      .+.+++|+|++|++|..+++.+...|++|++. .++.++.+...+.+   +..   ...|..+.+++...+++.   .  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            35789999999999999999998899988774 67766554332232   221   123554432333333332   1  


Q ss_pred             --C-CCccEEEeCCCc
Q 024337          147 --P-EGIDVYFENVGG  159 (269)
Q Consensus       147 --~-~~~d~vid~~g~  159 (269)
                        + +++|++|.++|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence              1 268999999974

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.47  E-value=0.0008  Score=54.02  Aligned_cols=81  Identities=22%  Similarity=0.338  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+++++|.|+++++|..++..+...|++|+.++++.++.+.+.+.   .+.. .  ..|..+.++..+.+.+..  -+++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999887766544322   2322 1  245554423333333321  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.++|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.46  E-value=0.001  Score=53.37  Aligned_cols=81  Identities=19%  Similarity=0.275  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++.+++|.|+++++|..+++.+...|++|+.+++++++.+.+.++   .+..   ...|..+.+++...+.+...  +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999988999999999987765443322   2321   12344443233333333221  368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |.++.++|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0011  Score=53.26  Aligned_cols=81  Identities=21%  Similarity=0.182  Sum_probs=52.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|+|+++++|..+++.+...|++|++++++++ ..+.+.+   ..+.. .  ..|..+..+..+.+.+..  -++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999997653 2222211   22322 1  234444313333333322  147


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|++.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999984

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.45  E-value=0.0014  Score=52.15  Aligned_cols=81  Identities=21%  Similarity=0.337  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      ++.+++|.||+|++|..+++.+...|+.|+...++.++.+.+...++...   ..|..+.+++...+.+..  -+++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46799999999999999999999999999988888777665543444321   234443312222222221  1379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |.++|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999983

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.44  E-value=0.0019  Score=52.63  Aligned_cols=95  Identities=15%  Similarity=0.118  Sum_probs=63.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ..+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. .. +..+.+     .++|+|++|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence            35678999998 999999999999999 5999999999887766545542210111 10 111111     258999999


Q ss_pred             CCchhH------hhhHhhhhcCCEEEEEec
Q 024337          157 VGGKTL------DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       157 ~g~~~~------~~~~~~l~~~G~~v~~g~  180 (269)
                      ++....      ......++++..++.+..
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence            985221      223456777777776644

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0025  Score=50.66  Aligned_cols=104  Identities=17%  Similarity=0.136  Sum_probs=63.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++.+++|+|++|++|...++.+...|++|+.+.++.+ ..+.+.+   ..+.. .  ..|..+..+..+.+++..  -++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999888776433 2222211   22321 1  234444313333333321  136


Q ss_pred             ccEEEeCCCchh--------------------------HhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGGKT--------------------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++|.++|...                          ++.+++.++.+|+++.++...
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            899999988310                          223444555678999887543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.44  E-value=0.002  Score=55.29  Aligned_cols=74  Identities=19%  Similarity=0.225  Sum_probs=54.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      -.+.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.++   +..+.+.     .+|+||+|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence            46789999998 9999999999999997 8999999988877766566522233221   2222222     48999999


Q ss_pred             CCch
Q 024337          157 VGGK  160 (269)
Q Consensus       157 ~g~~  160 (269)
                      ++..
T Consensus       250 T~a~  253 (414)
T PRK13940        250 VNVL  253 (414)
T ss_pred             cCCC
Confidence            9973

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.00069  Score=54.29  Aligned_cols=78  Identities=17%  Similarity=0.260  Sum_probs=52.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++.++  ... ..... ...|..+.++..+.+.+..  -+++|++|.
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   81 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVD-GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN   81 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999999999999999988654  111 11121 1345444323333333321  136899999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        82 ~ag~   85 (252)
T PRK07856         82 NAGG   85 (252)
T ss_pred             CCCC
Confidence            9873

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.00084  Score=54.97  Aligned_cols=82  Identities=17%  Similarity=0.191  Sum_probs=53.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHc---CCce---eEecCChhhHHHHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---------DKVDLLKNKF---GFDE---AFNYKEEADLNAAL  142 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~---------~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i  142 (269)
                      -++++++|+||++++|..+++.+...|++|++++++.         ++.+.+.+++   +...   ..|..+.++..+.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            3578999999999999999999999999999987654         4333332232   3221   23444432333333


Q ss_pred             HHHC--CCCccEEEeCCCc
Q 024337          143 KRYF--PEGIDVYFENVGG  159 (269)
Q Consensus       143 ~~~~--~~~~d~vid~~g~  159 (269)
                      .+..  -+++|++++++|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence            3322  1479999999984

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.44  E-value=0.00099  Score=53.57  Aligned_cols=81  Identities=19%  Similarity=0.276  Sum_probs=54.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++.++||+|++|++|..+++.+...|++|+++++++++.+.+.+   +.+...   ..|..+.....+.+.+..  -+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999998866544332   233321   124444312222222221  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.|+|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999974

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.44  E-value=0.00084  Score=53.98  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=52.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .++++||+||++++|..+++.+...|++|++++++ ++.+.+.+   +.+..   ...|..+..+....+.+..  -+++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999877 33332221   33322   1345444312222333221  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.+.|.
T Consensus        93 d~li~~ag~  101 (258)
T PRK06935         93 DILVNNAGT  101 (258)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.43  E-value=0.0013  Score=52.98  Aligned_cols=104  Identities=13%  Similarity=0.148  Sum_probs=66.6

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK---VDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~---~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+  +++|.++++.+...|++|++++++++.   .+.+.++++...  ..|..+.++..+.+.+...  ++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            47899999997  499999999999999999999887543   233332444322  2344443233333333221  47


Q ss_pred             ccEEEeCCCch---------------h---------------HhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGGK---------------T---------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++++++|..               .               .+.++..|+.+|+++.++...
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            99999998731               0               244556666678888876543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.43  E-value=0.001  Score=53.55  Aligned_cols=81  Identities=15%  Similarity=0.224  Sum_probs=53.8

Q ss_pred             CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      .+++++|+|+  ++++|.++++.+...|++|+.++++.  +..+.+.++++..   ...|..+.++..+.+.+..  -++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999  89999999999999999999998653  3344443344431   2345544423333333322  147


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999999873

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.41  E-value=0.0015  Score=52.40  Aligned_cols=80  Identities=15%  Similarity=0.174  Sum_probs=53.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      .+++++|+||+|++|..+++.+...|++|+++.++. +..+.++ ..+... ..|..+..+..+.+.+..  -+++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999999999999998876543 3344444 333322 345555423333333322  13699999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      .|+|.
T Consensus        85 ~~ag~   89 (255)
T PRK06463         85 NNAGI   89 (255)
T ss_pred             ECCCc
Confidence            99874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.40  E-value=0.0011  Score=52.83  Aligned_cols=81  Identities=17%  Similarity=0.206  Sum_probs=53.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+.+++|+||+|++|...+..+...|++|++++++.++.....+   +.+.. .  ..|..+.+++.+.+.+..  -+++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999998899999999998665443321   22221 1  224444313333333221  1368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |.++.+.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999864

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.40  E-value=0.00075  Score=50.28  Aligned_cols=79  Identities=18%  Similarity=0.275  Sum_probs=51.7

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS--KDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s--~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++|+||++++|...++.+-..|. +|+.+.++  .++.+.+.++   .+.. .  ..|..+..+....+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4789999999999999999988877 88888888  4544444223   3432 1  234444323333333332  237


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|.|.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999985

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.40  E-value=0.0013  Score=53.11  Aligned_cols=81  Identities=20%  Similarity=0.249  Sum_probs=55.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+   +..   ...|..+..+..+.+.+...  +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999999999899999999998887665443232   332   13444443122332332211  368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |.++.++|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK06398 aldose dehydrogenase; Validated

Probab=97.40  E-value=0.00041  Score=55.87  Aligned_cols=76  Identities=13%  Similarity=0.136  Sum_probs=51.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC--CCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF--PEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~--~~~~d~vid~  156 (269)
                      ++++++|+|+++++|..++..+...|++|+++++++++...+.     ....|..+..+..+.+.+..  -+++|+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999999998754322110     11335554323333333322  1369999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        80 Ag~   82 (258)
T PRK06398         80 AGI   82 (258)
T ss_pred             CCC
Confidence            873

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.40  E-value=0.0027  Score=52.58  Aligned_cols=100  Identities=19%  Similarity=0.235  Sum_probs=69.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      +...++++++||..|+  |.|..++.+++..+.  +|++++.+++..+.+++   ..|.+.+.....  +..+.+..  .
T Consensus        74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~--~  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPE--F  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhcccc--c
Confidence            3456889999999997  469999999998764  79999999987766653   345543322222  22222211  1


Q ss_pred             CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       148 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      +.||+|+.+.+. .......+.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            369999998885 4455678899999998764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.40  E-value=0.001  Score=53.63  Aligned_cols=81  Identities=9%  Similarity=0.163  Sum_probs=51.8

Q ss_pred             CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK---NKFGFD--EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~---~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||  ++++|.++++.+...|++|+.+.+.+...+.++   ++.+..  ...|..+.++..+.+.+...  ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999996  679999999999999999998876543222232   122322  23455544233333333221  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999999974

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.40  E-value=0.00065  Score=52.99  Aligned_cols=98  Identities=16%  Similarity=0.178  Sum_probs=67.8

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRY  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~  145 (269)
                      ....++++++||-.|+  |.|..+..+++..+  .+|++++.+++..+.+++.+   |...  ++..+.    ....  .
T Consensus        70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~----~~~~--~  141 (212)
T PRK13942         70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG----TLGY--E  141 (212)
T ss_pred             HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc----ccCC--C
Confidence            4567899999999995  77888888888875  59999999999887776443   3322  222221    1000  0


Q ss_pred             CCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          146 FPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       146 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      ..++||.|+-.... .......+.|+++|+++..
T Consensus       142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            12379998765543 5557788899999998875

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0015  Score=52.69  Aligned_cols=81  Identities=21%  Similarity=0.251  Sum_probs=53.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HcCCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN--KFGFD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~--~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++.+++|+|++|++|..+++.+...|++|+.++++++..+...+  ..+..   ...|..+.++....+.+..  .+++|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999988753333321  22322   1234444313333233221  13689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|.++|.
T Consensus        85 ~vi~~ag~   92 (263)
T PRK08226         85 ILVNNAGV   92 (263)
T ss_pred             EEEECCCc
Confidence            99999983

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.39  E-value=0.0015  Score=53.89  Aligned_cols=104  Identities=17%  Similarity=0.254  Sum_probs=70.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----ce----eEecCChhhHHHHHHHHC--C
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DE----AFNYKEEADLNAALKRYF--P  147 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~~----~~~~~~~~~~~~~i~~~~--~  147 (269)
                      -++.+++|+|+++|+|..++.-+...|++|+..+|+.++.+.+.+++..    ..    ..|-.+..+......+..  .
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            3568999999999999999999999999999999998776665544432    22    234333212222222221  2


Q ss_pred             CCccEEEeCCCch------------------------hHhhhHhhhhcC--CEEEEEecc
Q 024337          148 EGIDVYFENVGGK------------------------TLDAVLPNMKIR--GRIAACGMI  181 (269)
Q Consensus       148 ~~~d~vid~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~  181 (269)
                      .+.|+.|+++|--                        ..+..++.|+..  +|+|.++..
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~  172 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI  172 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence            3899999988831                        134566666654  799988763

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.39  E-value=0.00029  Score=61.63  Aligned_cols=94  Identities=17%  Similarity=0.180  Sum_probs=65.1

Q ss_pred             hhcCCCCCEEE----EecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCC
Q 024337           74 VCSAKHGECVF----ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        74 ~~~~~~~~~vl----I~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ..++++++.++    |+||+|++|.+++|+++..|++|+.+..++.+....+ ..+.+ .++|.+.. .+.+.+....  
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~--  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY--  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH--
Confidence            46788999998    9999999999999999999999999886655333333 33444 35665553 3333333211  


Q ss_pred             CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccc
Q 024337          149 GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       149 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                                 ..+...++.|.++|+++.++...
T Consensus       104 -----------~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        104 -----------EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             -----------HHHHHHHHhccCCCEEEEEcccc
Confidence                       34556677778888888887643

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0046  Score=50.28  Aligned_cols=101  Identities=16%  Similarity=0.188  Sum_probs=64.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC-CCCccE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF-PEGIDV  152 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~-~~~~d~  152 (269)
                      +++++|.|+ |++|..++..+. .|++|+.+++++++.+.+.+++   +..   ...|..+.++....+.+.. -+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            467899998 799999999985 7999999999877665443233   321   1245555423333333321 147999


Q ss_pred             EEeCCCch----h---------------HhhhHhhhhcCCEEEEEeccc
Q 024337          153 YFENVGGK----T---------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       153 vid~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +++++|..    .               ++..++.++++|+++.++...
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            99999841    1               234455566677777766543

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.00098  Score=52.64  Aligned_cols=75  Identities=24%  Similarity=0.220  Sum_probs=52.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPE-GIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~  156 (269)
                      ++++++|.|++|++|..+++.+...|.+|+++.++.++ .     +.. -...|..+..+..+.+.+.... ++|++|.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            35789999999999999999999999999999987654 1     111 1234555542333334433322 68999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      .|.
T Consensus        76 ag~   78 (234)
T PRK07577         76 VGI   78 (234)
T ss_pred             CCC
Confidence            884

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.36  E-value=0.003  Score=48.11  Aligned_cols=98  Identities=18%  Similarity=0.152  Sum_probs=64.9

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ..+.++.+||-.|+  |.|..+..+++.. +++|++++.+++..+.+++   +.+.+. +..... +..+ +..  .+.|
T Consensus        41 ~~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~f  113 (187)
T PRK00107         41 PYLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKF  113 (187)
T ss_pred             hhcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCc
Confidence            34566899999996  5567777777644 6799999999887766653   344432 222221 2222 111  3379


Q ss_pred             cEEEeCCCc---hhHhhhHhhhhcCCEEEEEe
Q 024337          151 DVYFENVGG---KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       151 d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  179 (269)
                      |+|+.....   ..+..+.+.|+++|+++.+-
T Consensus       114 DlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        114 DVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             cEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            999875432   56778899999999999773

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.36  E-value=0.0013  Score=52.96  Aligned_cols=80  Identities=14%  Similarity=0.253  Sum_probs=51.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----cCCc-e--eEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK----FGFD-E--AFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~----~g~~-~--~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      ++++++|+||++++|..++..+...|++|+.+.+ ++++.+...+.    .+.. .  ..|..+..+..+.+.+..  -+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999988864 44443332212    2322 1  335554323333333322  13


Q ss_pred             CccEEEeCCC
Q 024337          149 GIDVYFENVG  158 (269)
Q Consensus       149 ~~d~vid~~g  158 (269)
                      ++|++++++|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            7999999886

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.35  E-value=0.0025  Score=46.86  Aligned_cols=90  Identities=22%  Similarity=0.278  Sum_probs=59.5

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .-.|++++|.|- |-+|.-.++.++.+|++|+++..++-+.-.+. .-|.. +.      ...+.+.     ..|+++.+
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~-----~adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR-----DADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT-----T-SEEEE-
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh-----hCCEEEEC
Confidence            457999999998 99999999999999999999998887666555 44553 21      2333332     47999999


Q ss_pred             CCchh--HhhhHhhhhcCCEEEEEec
Q 024337          157 VGGKT--LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       157 ~g~~~--~~~~~~~l~~~G~~v~~g~  180 (269)
                      +|...  -.+.++.|+.+..+..+|.
T Consensus        86 TG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   86 TGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             CCCccccCHHHHHHhcCCeEEeccCc
Confidence            99843  3577888888777766654

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.35  E-value=0.0013  Score=52.82  Aligned_cols=80  Identities=13%  Similarity=0.085  Sum_probs=53.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCC--ce--eEecCChhhHHHHHHHHC--CCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGF--DE--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~----~g~--~~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +++++|+|++|++|..+++.+...|++|+.++++.++.+.+.+.    .+.  ..  ..|..+..+....+.+..  -++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999887765444322    221  11  234444312333333321  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        82 id~vv~~ag~   91 (259)
T PRK12384         82 VDLLVYNAGI   91 (259)
T ss_pred             CCEEEECCCc
Confidence            8999999973

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.35  E-value=0.0015  Score=52.72  Aligned_cols=80  Identities=14%  Similarity=0.259  Sum_probs=51.8

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||++  |+|.++++.+...|++|+.+++++.   ..+.+..+.+..  ...|..+.++....+.+...  ++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            468999999975  8999999999999999998887632   222232122221  22455554233333333322  37


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++++++|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            999999997

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.35  E-value=0.0019  Score=55.31  Aligned_cols=76  Identities=28%  Similarity=0.357  Sum_probs=51.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ++++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.. .  ..|..+. +   .+.+.. +++|++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-~---~v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-A---ALAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-H---HHHHHh-CCCCEEEE
Confidence            4789999999999999999999889999999998877654322121111 1  2344433 2   223222 36999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus       252 nAGi  255 (406)
T PRK07424        252 NHGI  255 (406)
T ss_pred             CCCc
Confidence            8873

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=97.35  E-value=0.0028  Score=49.95  Aligned_cols=102  Identities=22%  Similarity=0.256  Sum_probs=72.6

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcee--EecCChhhHHHHHHHHCCCCcc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      .++.+|++||=.++  |+|-++..+++..|- +|++++.|++.++.+++++.-...  +..... + ++.+. ..++.||
T Consensus        47 ~~~~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~-d-Ae~LP-f~D~sFD  121 (238)
T COG2226          47 LGIKPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG-D-AENLP-FPDNSFD  121 (238)
T ss_pred             hCCCCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEe-c-hhhCC-CCCCccC
Confidence            45568999998884  889999999998875 999999999999888755442110  211111 1 11121 1223899


Q ss_pred             EEEeCCCc-------hhHhhhHhhhhcCCEEEEEecc
Q 024337          152 VYFENVGG-------KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       152 ~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ++..+.|-       ..+.++.|.|+|+|+++.+...
T Consensus       122 ~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~  158 (238)
T COG2226         122 AVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS  158 (238)
T ss_pred             EEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence            99887773       4688999999999999988764

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.35  E-value=0.0015  Score=50.72  Aligned_cols=98  Identities=14%  Similarity=0.120  Sum_probs=67.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKR  144 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~  144 (269)
                      +...++++++||-.|+  |.|..++.+++..+  .+|++++.+++..+.+++++   +..   .++..    +..+.+. 
T Consensus        66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~----d~~~~~~-  138 (205)
T PRK13944         66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG----DGKRGLE-  138 (205)
T ss_pred             HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC----CcccCCc-
Confidence            4456788999999996  67888888888764  59999999988777666433   332   12222    2111111 


Q ss_pred             HCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          145 YFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       145 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                       ..++||.|+-+... ...+...+.|+++|+++..
T Consensus       139 -~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 -KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             -cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence             12379999877664 4556778999999999764

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.35  E-value=0.0027  Score=54.86  Aligned_cols=74  Identities=20%  Similarity=0.371  Sum_probs=55.3

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +..++++++|+|+ |.+|..+++.++..| .+|+++.++.++.+.+.+.+|.. .++..   +..+.+.     ++|+||
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvVi  245 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIVI  245 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEEE
Confidence            3467899999998 999999999999999 48999999988765443377763 33221   3333332     589999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +|+|.
T Consensus       246 ~aT~s  250 (417)
T TIGR01035       246 SSTGA  250 (417)
T ss_pred             ECCCC
Confidence            99986

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.33  E-value=0.0016  Score=51.98  Aligned_cols=80  Identities=14%  Similarity=0.208  Sum_probs=54.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+.+   +.. .  ..|..+..+..+.+....  -+++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999999999999999999999999999999887665543222   221 1  234433312233333222  1368


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|.++|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999997

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.33  E-value=0.0026  Score=52.46  Aligned_cols=38  Identities=13%  Similarity=0.194  Sum_probs=32.5

Q ss_pred             CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 024337           79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKV  117 (269)
Q Consensus        79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s~~~~  117 (269)
                      .|++++|+|+  ++|+|.++++.+...|++|++ .+..+++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            5889999999  899999999999999999988 5554443

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.002  Score=53.27  Aligned_cols=80  Identities=14%  Similarity=0.201  Sum_probs=52.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---HcCCc---eeEecCChhhHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----------DKVDLLKN---KFGFD---EAFNYKEEADLNAAL  142 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----------~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i  142 (269)
                      .+++++|+||++|+|.++++.+...|++|++++++.          ++.+.+.+   ..+..   ...|..+..+....+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            478999999999999999999999999999999863          23322221   33322   123444432333333


Q ss_pred             HHHCC--CCccEEEeCC-C
Q 024337          143 KRYFP--EGIDVYFENV-G  158 (269)
Q Consensus       143 ~~~~~--~~~d~vid~~-g  158 (269)
                      .+...  +++|++++++ |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence            33221  3799999988 5

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.31  E-value=0.0033  Score=52.29  Aligned_cols=94  Identities=16%  Similarity=0.215  Sum_probs=61.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|+|+||+|-+|..+++.+...|.+|.+++|+.++...+. ..+...+ .|..+..++.+.+    . ++|+||++++..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al----~-g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF----K-GVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH----C-CCCEEEECCCCC
Confidence            6999999999999999999999999999999877665554 4455322 2333321222222    2 589999987631


Q ss_pred             -----h--------HhhhHhhhhcCC--EEEEEecc
Q 024337          161 -----T--------LDAVLPNMKIRG--RIAACGMI  181 (269)
Q Consensus       161 -----~--------~~~~~~~l~~~G--~~v~~g~~  181 (269)
                           .        ....++.++..|  +++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                 0        123344444443  78877653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=97.31  E-value=0.0024  Score=48.05  Aligned_cols=81  Identities=15%  Similarity=0.178  Sum_probs=56.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ce-e--EecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DE-A--FNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~-~--~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      .....+|.|+++|+|.+..|.+...|++|.+.+......+.....++.  ++ .  .|.++..+....+++...  +.++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            356789999999999999999999999999999877665554436665  22 2  344443233332443322  3799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++|+|-
T Consensus        93 vlVncAGI  100 (256)
T KOG1200|consen   93 VLVNCAGI  100 (256)
T ss_pred             EEEEcCcc
Confidence            99999993

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.0017  Score=52.60  Aligned_cols=78  Identities=19%  Similarity=0.170  Sum_probs=51.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      +++|+||+|++|...++.+...|++|++++++.++.+.+.+.+   +...   ..|..+..+..+.+....  .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999889999999999887765433222   2221   234433312222222221  1369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |.++|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999984

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.31  E-value=0.0019  Score=51.76  Aligned_cols=80  Identities=19%  Similarity=0.272  Sum_probs=51.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCc-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++++++|+|+++++|.++++.+...|++|+.++++..  ..+.++ ..+.. .  ..|..+.++..+.+.+..  .+++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999998875432  223333 33422 1  234443313333333322  13799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99999974

>PLN02476 O-methyltransferase

Probab=97.31  E-value=0.0047  Score=49.92  Aligned_cols=104  Identities=15%  Similarity=0.142  Sum_probs=71.2

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      +....+..+.++||=.|  +++|..++.+++.++  .+|+.++.+++..+.+++.   .|...-+..... +..+.+.++
T Consensus       110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l  186 (278)
T PLN02476        110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSM  186 (278)
T ss_pred             HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHH
Confidence            33446677889999998  588999999998774  4899999999888777644   465433333332 444444443


Q ss_pred             C----CCCccEEEeCCC-c---hhHhhhHhhhhcCCEEEE
Q 024337          146 F----PEGIDVYFENVG-G---KTLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       146 ~----~~~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~  177 (269)
                      .    .+.||.||--.. .   ..++.++++|+++|.++.
T Consensus       187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence            1    247997754443 2   567889999999998775

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0021  Score=51.09  Aligned_cols=78  Identities=15%  Similarity=0.222  Sum_probs=51.9

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-e--eEecCChhhHHHHHHHHCCCCccEE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ++++|+||+|++|...++.+...|++|+++++++++.+...+.+    +.. .  ..|..+..+..+.+.+. ..++|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCEE
Confidence            57999999999999999999999999999999887665433222    111 1  23444331233333332 1257999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      +.++|.
T Consensus        81 v~~ag~   86 (243)
T PRK07102         81 LIAVGT   86 (243)
T ss_pred             EECCcC
Confidence            988874

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.29  E-value=0.0015  Score=50.71  Aligned_cols=99  Identities=19%  Similarity=0.252  Sum_probs=65.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HcCCcee-EecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~i~~~~  146 (269)
                      +...++++++||-.|+  |.|+.++-+++..|.  +|+.+.+.++-.+.+++   .++...+ +...+.   ..-+.+  
T Consensus        66 ~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~~--  138 (209)
T PF01135_consen   66 EALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWPE--  138 (209)
T ss_dssp             HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTGG--
T ss_pred             HHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhcccc--
Confidence            5577999999999994  779999999998875  79999988875555544   4455432 222111   111111  


Q ss_pred             CCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          147 PEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       147 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      .++||.|+-+.+. ..-...++.|+++|++|..
T Consensus       139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            1379999988886 4456788899999999975

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.27  E-value=0.0021  Score=51.47  Aligned_cols=100  Identities=15%  Similarity=0.114  Sum_probs=62.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-cCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK-FGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +.+|+|+||+|.+|..+++.+...|.+|+++.|+.++....... .+... ..|..+.   .+.+.+....++|++|.+.
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEECC
Confidence            57999999999999999999988899999999888765433211 11221 2344331   1222222222699999988


Q ss_pred             Cch--------------hHhhhHhhhhc--CCEEEEEeccc
Q 024337          158 GGK--------------TLDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       158 g~~--------------~~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                      |..              .....++.+..  .++++.++...
T Consensus        94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            741              12233444443  36888877643

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.27  E-value=0.0021  Score=51.24  Aligned_cols=83  Identities=11%  Similarity=0.147  Sum_probs=54.3

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc--ee--EecC--ChhhHHHHHHHHCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD--EA--FNYK--EEADLNAALKRYFP  147 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~--~~--~~~~--~~~~~~~~i~~~~~  147 (269)
                      ..++.+++|.|++|++|...++.+...|++|++++++.++.+.+.+++   +..  ..  .|.+  +..++.+.+.....
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457889999999999999999999889999999999887654433222   221  11  2332  11122222222211


Q ss_pred             --CCccEEEeCCCc
Q 024337          148 --EGIDVYFENVGG  159 (269)
Q Consensus       148 --~~~d~vid~~g~  159 (269)
                        +++|.+|.++|.
T Consensus        89 ~~~~id~vi~~Ag~  102 (247)
T PRK08945         89 QFGRLDGVLHNAGL  102 (247)
T ss_pred             HhCCCCEEEECCcc
Confidence              368999998863

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0022  Score=52.11  Aligned_cols=80  Identities=23%  Similarity=0.341  Sum_probs=52.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-------HH----HHHHHcCCce---eEecCChhhHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-------VD----LLKNKFGFDE---AFNYKEEADLNAALKR  144 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-------~~----~~~~~~g~~~---~~~~~~~~~~~~~i~~  144 (269)
                      ++.+++|+||+|++|..+++.+...|++|++++++.+.       .+    .++ ..+...   ..|..+.++..+.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence            46799999999999999999999999999999987542       11    122 223321   2455554233333332


Q ss_pred             HCC--CCccEEEeCCCc
Q 024337          145 YFP--EGIDVYFENVGG  159 (269)
Q Consensus       145 ~~~--~~~d~vid~~g~  159 (269)
                      ...  +++|++|+++|.
T Consensus        84 ~~~~~g~id~li~~ag~  100 (273)
T PRK08278         84 AVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHhCCCCEEEECCCC
Confidence            211  369999999884

>PRK05599 hypothetical protein; Provisional

Probab=97.27  E-value=0.0018  Score=51.68  Aligned_cols=77  Identities=14%  Similarity=0.158  Sum_probs=51.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc--e--eEecCChhhHHHHHHHHC--CCCccE
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD--E--AFNYKEEADLNAALKRYF--PEGIDV  152 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~--~--~~~~~~~~~~~~~i~~~~--~~~~d~  152 (269)
                      +++|+||++|+|.+.+..+. .|.+|+.+++++++.+.+.+++   +..  .  .+|..+.++..+.+.+..  -+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999998877 5999999999988776553333   321  1  234444312322232222  147999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      ++.++|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9998874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.27  E-value=0.0017  Score=52.37  Aligned_cols=81  Identities=16%  Similarity=0.260  Sum_probs=52.6

Q ss_pred             CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGS---KDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||  ++++|.++++.+...|++|+.+.+.   +++.+.+.++++..  ...|..+.++..+.+.+...  ++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999996  5799999999999999999987643   33444333244432  23455544233333333322  47


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999999873

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0033  Score=51.12  Aligned_cols=80  Identities=15%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ..+++|+||+|++|..+++.+...|++|++++++.++.+...+   ..+...   ..|..+.++....+.+..  -+++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999988776544332   223321   134444323333333221  13689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|.++|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99999974

>PRK12743 oxidoreductase; Provisional

Probab=97.26  E-value=0.0024  Score=51.26  Aligned_cols=80  Identities=15%  Similarity=0.247  Sum_probs=51.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +++++|+||++++|..+++.+...|++|+.+.+ +.++.+.+.+   ..+.. .  ..|..+..+....+.+...  +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999999999999988764 4443333221   33432 1  2444443122222322211  368


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.++|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999999884

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=97.26  E-value=0.01  Score=42.05  Aligned_cols=93  Identities=17%  Similarity=0.222  Sum_probs=59.1

Q ss_pred             EEEecCcchHHHHHHHHHHHcC--CEEEEEeC--CHHHH-HHHHHHcCCceeEecCChhhHHHHH---------------
Q 024337           83 VFISAASGAVGQLVGQFAKLLG--CYVVGSAG--SKDKV-DLLKNKFGFDEAFNYKEEADLNAAL---------------  142 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~--s~~~~-~~~~~~~g~~~~~~~~~~~~~~~~i---------------  142 (269)
                      |.|+|+||++|..+.++.+.+.  ++|++..-  +-+.+ +.++ +|.+.+++-.++  +..+.+               
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~--~~~~~l~~~~~~~~~~~~v~~   77 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADE--EAYEELKKALPSKGPGIEVLS   77 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSH--HHHHHHHHHHHHTTSSSEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCH--HHHHHHHHHhhhcCCCCEEEe
Confidence            6799999999999999999987  58877663  22333 3344 787776654443  222222               


Q ss_pred             -----HHHCC-CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          143 -----KRYFP-EGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       143 -----~~~~~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                           .++.. ..+|+++.+.-+ ..+...+..++.+-++.+.
T Consensus        78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA  120 (129)
T PF02670_consen   78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA  120 (129)
T ss_dssp             SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred             ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence                 22222 378888887765 7788888888877666553

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.26  E-value=0.0073  Score=48.19  Aligned_cols=103  Identities=15%  Similarity=0.194  Sum_probs=63.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHHcCCc---eeEecCChhhHHHHHHHHCC--CC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVD----LLKNKFGFD---EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~----~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +.+++|.||+|++|...++.+...|++|+.+.++ .++..    .++ ..+..   ...|..+..+....+.+...  ++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999988999998877643 22222    222 33322   12344443123222333211  36


Q ss_pred             ccEEEeCCCc-h-------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          150 IDVYFENVGG-K-------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       150 ~d~vid~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +|++|.++|. .                         ..+.+.+.++..|+++.++....
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            8999999983 0                         02334555567789998877554

>PRK09135 pteridine reductase; Provisional

Probab=97.24  E-value=0.0024  Score=50.81  Aligned_cols=80  Identities=11%  Similarity=0.118  Sum_probs=51.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHc----CCc---eeEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNKF----GFD---EAFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~~~----g~~---~~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++. ++.+.+.+.+    +..   ...|..+.++....+.+..  -+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999998999999999753 3333322111    111   1235544312333333221  13


Q ss_pred             CccEEEeCCC
Q 024337          149 GIDVYFENVG  158 (269)
Q Consensus       149 ~~d~vid~~g  158 (269)
                      ++|++|.++|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999998

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.24  E-value=0.0019  Score=51.66  Aligned_cols=80  Identities=15%  Similarity=0.200  Sum_probs=53.9

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      +.++||+|++|++|..++..+...|.+|++++++.++.+.+.+.+   +..   ...|..+.+++...+.+..  -+++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            357999999999999999999889999999999887766554222   221   1234444323333232221  13689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|.+.|.
T Consensus        81 ~vi~~a~~   88 (255)
T TIGR01963        81 ILVNNAGI   88 (255)
T ss_pred             EEEECCCC
Confidence            99998864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.00098  Score=53.61  Aligned_cols=76  Identities=18%  Similarity=0.249  Sum_probs=50.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      ++++++|+|++|++|..+++.+...|++|++++++++..  ..  -... ...|..+.++....+.+..  -+++|++++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   83 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH   83 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            478999999999999999999999999999999875531  11  1111 1234444312222222221  136999999


Q ss_pred             CCC
Q 024337          156 NVG  158 (269)
Q Consensus       156 ~~g  158 (269)
                      ++|
T Consensus        84 ~ag   86 (260)
T PRK06523         84 VLG   86 (260)
T ss_pred             CCc
Confidence            998

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=97.24  E-value=0.0035  Score=48.83  Aligned_cols=94  Identities=22%  Similarity=0.250  Sum_probs=63.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      -++.+||=.|+.|  |+++.-+|+ +|++|++++.+++..+.++ ......  .+||...  ..+.+.+. +++||+|++
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhc-CCCccEEEE
Confidence            3788999999833  566666655 5899999999999999887 322221  2455542  22333221 148999976


Q ss_pred             C-----CCc--hhHhhhHhhhhcCCEEEEE
Q 024337          156 N-----VGG--KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       156 ~-----~g~--~~~~~~~~~l~~~G~~v~~  178 (269)
                      .     +..  ..+..+.++++|+|.++..
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            3     332  4567899999999988765

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.23  E-value=0.012  Score=47.69  Aligned_cols=94  Identities=14%  Similarity=0.146  Sum_probs=61.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .++++++|.|+ |++|.+++..+...|++|+++.++.++.+.+.+.+... .....    ...+    .....+|++++|
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~----~~~~----~~~~~~DivIna  185 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF----SMDE----LPLHRVDLIINA  185 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe----chhh----hcccCccEEEEC
Confidence            45789999998 89999999999888999999999988766554344321 11111    1111    111258999999


Q ss_pred             CCchh---H---hhhHhhhhcCCEEEEEec
Q 024337          157 VGGKT---L---DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       157 ~g~~~---~---~~~~~~l~~~G~~v~~g~  180 (269)
                      ++...   .   ......++++..++.+..
T Consensus       186 tp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       186 TSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             CCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            98521   1   112345677777777654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.23  E-value=0.0028  Score=51.05  Aligned_cols=104  Identities=10%  Similarity=0.081  Sum_probs=66.9

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHcC-Cc---eeEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS---KDKVDLLKNKFG-FD---EAFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s---~~~~~~~~~~~g-~~---~~~~~~~~~~~~~~i~~~~~--  147 (269)
                      .+++++|+||+  +|+|.++++.+...|++|+.++++   +++.+.+.+++. ..   ...|..+..+....+.+...  
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            46899999997  799999999999999999998754   344444443442 11   13455554233333333322  


Q ss_pred             CCccEEEeCCCc-h------h-----------------------HhhhHhhhhcCCEEEEEeccc
Q 024337          148 EGIDVYFENVGG-K------T-----------------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       148 ~~~d~vid~~g~-~------~-----------------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +++|++++++|. .      .                       .+..++.++++|+++.++...
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~  150 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG  150 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence            479999998873 1      0                       123455566679999887654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.22  E-value=0.0024  Score=50.59  Aligned_cols=79  Identities=20%  Similarity=0.267  Sum_probs=50.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++++|+|++|++|..+++.+...|++|+++.+ ++++.+...++.   +..   ...|..+..++...+.+..  .+++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            46899999999999999999999999999887 444433322122   211   1234444312333333221  13689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      .+|.+.|.
T Consensus        81 ~vi~~ag~   88 (242)
T TIGR01829        81 VLVNNAGI   88 (242)
T ss_pred             EEEECCCC
Confidence            99999973

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07069 short chain dehydrogenase; Validated

Probab=97.22  E-value=0.0021  Score=51.26  Aligned_cols=77  Identities=21%  Similarity=0.280  Sum_probs=51.3

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHcC----Cc----eeEecCChhhHHHHHHHHCC--CCcc
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKFG----FD----EAFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~g----~~----~~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      ++|+|++|++|...++.+...|++|++++++ .++.+.+.+.+.    ..    ...|..+.+++.+.+.+...  +++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999987 555544432332    11    12355444233333333221  3689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +++.++|.
T Consensus        82 ~vi~~ag~   89 (251)
T PRK07069         82 VLVNNAGV   89 (251)
T ss_pred             EEEECCCc
Confidence            99999973

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=97.22  E-value=0.0077  Score=50.73  Aligned_cols=97  Identities=18%  Similarity=0.155  Sum_probs=66.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHcCCceeEecCChhhHHHHHH-------------
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEADLNAALK-------------  143 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~--~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~-------------  143 (269)
                      ++|.|+|+||++|..+...++..  .++|++++  ++.++.....++++..+++-.++  .....++             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G   79 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG   79 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence            57999999999999999998776  56888876  34445444444888876544333  2222222             


Q ss_pred             -----HHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEe
Q 024337          144 -----RYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       144 -----~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  179 (269)
                           ++... .+|+|+.+.++ ..+...+..++.|-++.+..
T Consensus        80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLAN  122 (385)
T PRK05447         80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALAN  122 (385)
T ss_pred             hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeC
Confidence                 22222 58999999987 67788888888887776643

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.21  E-value=0.0021  Score=51.72  Aligned_cols=104  Identities=13%  Similarity=0.139  Sum_probs=65.3

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC-
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK------DKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP-  147 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~------~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~-  147 (269)
                      .+++++|+||+  +++|.++++.+...|++|+++.++.      +..+.+.++.+..  ...|..+.++..+.+.+... 
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            46899999985  7999999999999999998876432      2233333122211  12455554233333333221 


Q ss_pred             -CCccEEEeCCCch-------h-----------------------HhhhHhhhhcCCEEEEEeccc
Q 024337          148 -EGIDVYFENVGGK-------T-----------------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       148 -~~~d~vid~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                       +++|++++++|..       .                       .+..++.|+++|+++.++...
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence             3799999999831       1                       234566677789999887644

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.20  E-value=0.003  Score=50.88  Aligned_cols=81  Identities=20%  Similarity=0.172  Sum_probs=52.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|.||++++|..+++.+...|++|+.+.++. +..+.+.+   ..+..   ...|..+.++..+.+....  .++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999998888743 33332221   22322   1235554323333333222  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|+++.++|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK08264 short chain dehydrogenase; Validated

Probab=97.20  E-value=0.0032  Score=49.88  Aligned_cols=77  Identities=17%  Similarity=0.205  Sum_probs=52.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+. . .-.... ..|..+..++.+.+.+ . +.+|++|.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-GPRVVPLQLDVTDPASVAAAAEA-A-SDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-CCceEEEEecCCCHHHHHHHHHh-c-CCCCEEEEC
Confidence            467899999999999999999999999 99999988765442 1 111111 2344443122232322 1 258999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.18  E-value=0.002  Score=59.14  Aligned_cols=81  Identities=17%  Similarity=0.271  Sum_probs=56.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc----eeEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD----EAFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~----~~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+.+.+    +..    ...|..+..++...+.+..  -+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999887665543232    221    1234444323333333322  13


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++++++|.
T Consensus       493 ~iDilV~nAG~  503 (676)
T TIGR02632       493 GVDIVVNNAGI  503 (676)
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.17  E-value=0.0026  Score=50.76  Aligned_cols=81  Identities=14%  Similarity=0.214  Sum_probs=51.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++.+++|+||+|++|..++..+...|++|+++ .++.++.+.+.+   ..+...   ..|..+..+....+.+..  -++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999998764 566655433321   233321   234444312333333321  136


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999973

>PRK05855 short chain dehydrogenase; Validated

Probab=97.17  E-value=0.0022  Score=57.84  Aligned_cols=81  Identities=16%  Similarity=0.111  Sum_probs=56.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+.   .|..   ...|..+.....+.+.+..  .+++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            467899999999999999999999999999999998776554322   2332   1245555412323333322  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999984

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.17  E-value=0.0027  Score=50.43  Aligned_cols=80  Identities=21%  Similarity=0.333  Sum_probs=52.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +.+++|.|++|++|...+..+...|++|+++ .++.++.+.+.+.+   +.. .  ..|..+..++...+.+...  +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999888889999998 88777655443232   211 1  2344443122222222211  369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=97.16  E-value=0.0043  Score=50.25  Aligned_cols=70  Identities=13%  Similarity=0.106  Sum_probs=51.4

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +...+++++|+|+ ||.+.+++..++..|+ +|+++.|+.++.+.+.+.++..          +.+.+.   ...+|+++
T Consensus       118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEE
Confidence            3445678999998 9999999999999998 7999999998887766455421          111111   12589999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +|++-
T Consensus       184 NaTp~  188 (272)
T PRK12550        184 NVTPI  188 (272)
T ss_pred             ECCcc
Confidence            99973

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.15  E-value=0.004  Score=49.77  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHH---HCCCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKR---YFPEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~---~~~~~~d  151 (269)
                      .+.+++|+||+|++|..++..+...|++|+.+.+ ++++.+.+.+.++.. .  ..|..+..++.+.+.+   ..+.++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3578999999999999999999999999987654 455555444344422 1  2344443133333332   2222499


Q ss_pred             EEEeCCC
Q 024337          152 VYFENVG  158 (269)
Q Consensus       152 ~vid~~g  158 (269)
                      +++.++|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999886

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=97.15  E-value=0.0092  Score=47.30  Aligned_cols=104  Identities=16%  Similarity=0.130  Sum_probs=70.1

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      |....+..+.++||-.|  .++|..++.+++..+  .+|+.++.+++..+.+++.   .|....+..... +..+.+.++
T Consensus        60 L~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l  136 (234)
T PLN02781         60 LSMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQL  136 (234)
T ss_pred             HHHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHH
Confidence            33456778889999998  477888888887763  4999999999988777643   354332222222 444444443


Q ss_pred             C----CCCccEEEeCCCc----hhHhhhHhhhhcCCEEEE
Q 024337          146 F----PEGIDVYFENVGG----KTLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       146 ~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  177 (269)
                      .    .+.||+||--...    ..+..+++.+++||.++.
T Consensus       137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~  176 (234)
T PLN02781        137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF  176 (234)
T ss_pred             HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence            2    2379988754432    567888999999998775

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=97.15  E-value=0.019  Score=46.61  Aligned_cols=107  Identities=17%  Similarity=0.233  Sum_probs=76.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----ceeEecCChhh---HHHHHHHHCCC-C
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEAD---LNAALKRYFPE-G  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~---~~~~i~~~~~~-~  149 (269)
                      .+++.|+|+|+-+|.|...+.-+...|.+|++.|..++..+.++.+..-    ...+|..++++   ..+.+++..++ +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            4567899999999999999999999999999999888877766633311    12456655422   33445555655 7


Q ss_pred             ccEEEeCCCc-h--------------------------hHhhhHhhhhc-CCEEEEEeccccc
Q 024337          150 IDVYFENVGG-K--------------------------TLDAVLPNMKI-RGRIAACGMISQY  184 (269)
Q Consensus       150 ~d~vid~~g~-~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~~  184 (269)
                      .=-+++++|- .                          .-+..+.++++ .||+|.++...++
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            8888999982 1                          12344556665 7999999887764

>PLN00015 protochlorophyllide reductase

Probab=97.15  E-value=0.0031  Score=52.22  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=52.3

Q ss_pred             EEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC---c---eeEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           84 FISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGF---D---EAFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        84 lI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~---~---~~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      +|+||++|+|..+++.+...| ++|+.++++.++.+.+.++++.   .   ...|..+..+....+.+..  .+++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999999998899 8999999988876655435432   1   1345555423333333332  23799999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +++|.
T Consensus        81 nnAG~   85 (308)
T PLN00015         81 CNAAV   85 (308)
T ss_pred             ECCCc
Confidence            99973

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=97.14  E-value=0.0066  Score=49.06  Aligned_cols=103  Identities=13%  Similarity=0.145  Sum_probs=68.4

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ...++.++.+||=.|+  |.|..+..+++..+++|++++.+++..+.+++.+.....+..... ++.+  ....++.||+
T Consensus        46 ~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~~FD~  120 (263)
T PTZ00098         46 SDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPENTFDM  120 (263)
T ss_pred             HhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCCCeEE
Confidence            5567889999999987  456667777777789999999999988888744432111111111 2110  0011237999


Q ss_pred             EEeCC-----C--c--hhHhhhHhhhhcCCEEEEEec
Q 024337          153 YFENV-----G--G--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       153 vid~~-----g--~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+..-     +  .  ..++.+.+.|+|+|+++....
T Consensus       121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            98621     2  1  457788999999999998654

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.14  E-value=0.0065  Score=46.40  Aligned_cols=98  Identities=17%  Similarity=0.157  Sum_probs=61.7

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCC-Cc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLL-G-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPE-GI  150 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G-~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~-~~  150 (269)
                      ..++++++||..|+ | .|..+..+++.. + .+|++++.++..    . ..++.. ..|..+. ...+.+.+..++ ++
T Consensus        28 ~~i~~g~~VLDiG~-G-tG~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGA-A-PGGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDKV   99 (188)
T ss_pred             cccCCCCEEEEecC-C-CCHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCCc
Confidence            45689999999997 4 344555555554 3 489999988754    1 223332 2244433 334445554444 89


Q ss_pred             cEEEeC-----CCc-------------hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFEN-----VGG-------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~-----~g~-------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+|+..     .|.             ..+..+.+.|+++|+++....
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~  147 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF  147 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence            999952     121             346778899999999987543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.13  E-value=0.0011  Score=53.57  Aligned_cols=77  Identities=14%  Similarity=0.170  Sum_probs=51.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      .+++++|+|++|++|..+++.+...|++|+.+++++++.+.    .... ...|..+..++.+.+.+..  -+++|++++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46889999999999999999999999999999977654321    1111 1235444323333333322  137899999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        84 ~Ag~   87 (266)
T PRK06171         84 NAGI   87 (266)
T ss_pred             CCcc
Confidence            9883

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0051  Score=49.41  Aligned_cols=81  Identities=16%  Similarity=0.185  Sum_probs=51.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      .+.+++|+||+|++|..+++.+...|++|+++++. .++.+.+.+.+   +..   ...|..+..+..+.+.+..  -++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999998999999887653 34433332122   332   1234444313333333221  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|.++|.
T Consensus        88 iD~vi~~ag~   97 (258)
T PRK09134         88 ITLLVNNASL   97 (258)
T ss_pred             CCEEEECCcC
Confidence            9999999973

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.12  E-value=0.012  Score=43.28  Aligned_cols=94  Identities=22%  Similarity=0.205  Sum_probs=62.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .++.+++|.|+ |++|...++.+...| .+|++++++.++.+.+.++++... ..+..   +..+.+     .++|+++.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence            45789999998 999999999998886 689999999887766554665421 01111   222211     36999999


Q ss_pred             CCCchhH-----hhhHhhhhcCCEEEEEec
Q 024337          156 NVGGKTL-----DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~-----~~~~~~l~~~G~~v~~g~  180 (269)
                      |++....     ......++++..++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9986332     222344667777777655

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02415 23BDH acetoin reductases

Probab=97.12  E-value=0.0033  Score=50.30  Aligned_cols=79  Identities=13%  Similarity=0.195  Sum_probs=52.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCccE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGIDV  152 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~  152 (269)
                      ++++|.|++|++|...++.+...|++|+.+.+++++.+.+.+.+   +...   ..|..+..+..+.+.+..  .+++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899999999999999999999999999998876654433222   3221   234444313333333321  136899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +|.++|.
T Consensus        81 vi~~ag~   87 (254)
T TIGR02415        81 MVNNAGV   87 (254)
T ss_pred             EEECCCc
Confidence            9999974

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.015  Score=47.50  Aligned_cols=93  Identities=19%  Similarity=0.072  Sum_probs=59.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC----ceeEecCChhhHHHHHHHHCCCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.+.++.    ..+....   +..+.+     ..+|+|
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV  196 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL  196 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence            4678999998 9999999999999998 899999998887766545432    1122111   222222     248999


Q ss_pred             EeCCCch-----hHhhhHhhhhcCCEEEEEec
Q 024337          154 FENVGGK-----TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       154 id~~g~~-----~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+|++..     ........++++..++.+-.
T Consensus       197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY  228 (284)
T PRK12549        197 VHATPTGMAKHPGLPLPAELLRPGLWVADIVY  228 (284)
T ss_pred             EECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence            9997521     11112344666655555533

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=97.11  E-value=0.0023  Score=49.47  Aligned_cols=105  Identities=15%  Similarity=0.139  Sum_probs=70.6

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      |....+..+.++||-+|  +.+|+.++.+|+.+  +.+|+.+..++++.+.+++   ..|....+..... +..+.+.++
T Consensus        37 L~~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l  113 (205)
T PF01596_consen   37 LQMLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPEL  113 (205)
T ss_dssp             HHHHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHH
T ss_pred             HHHHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHH
Confidence            33445566788999999  58899999999986  5699999999998877764   3455433332222 333444333


Q ss_pred             ---C-CCCccEE-EeCCCc---hhHhhhHhhhhcCCEEEEE
Q 024337          146 ---F-PEGIDVY-FENVGG---KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       146 ---~-~~~~d~v-id~~g~---~~~~~~~~~l~~~G~~v~~  178 (269)
                         . .+.||.| +|+.-.   ..+..++++|+++|.++.=
T Consensus       114 ~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  114 ANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             HHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             HhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence               2 2379976 555543   4577888999999977753

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.10  E-value=0.0049  Score=48.92  Aligned_cols=81  Identities=20%  Similarity=0.299  Sum_probs=51.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHH---cCCc-ee--EecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNK---FGFD-EA--FNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~~---~g~~-~~--~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+.+++|+|++|++|...+..+...|++|+++.++... .+...+.   .+.. ..  .|..+..++.+.+.+...  ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999887765542 2222212   2222 12  244443233333333322  26


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|.++.++|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0042  Score=57.06  Aligned_cols=80  Identities=21%  Similarity=0.293  Sum_probs=55.9

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      +++++|+||+|++|..++..+...|++|+++++++++.+.+.+++   +..   ...|..+.++..+.+.+..  -+++|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            678999999999999999999999999999999988766543232   321   1235554323333333322  13699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus       451 ~li~~Ag~  458 (657)
T PRK07201        451 YLVNNAGR  458 (657)
T ss_pred             EEEECCCC
Confidence            99999983

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.10  E-value=0.0028  Score=51.74  Aligned_cols=75  Identities=13%  Similarity=-0.026  Sum_probs=52.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++.+++|+|+ |+++.+++..+...|+ +|+++.|+.++.+.+.+.++... +.....   . +.+.+.. ..+|+||+|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---D-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---h-hhhhhcc-cCCCEEEEC
Confidence            5789999998 9999999999999998 89999999988877664554321 111111   0 1111111 258999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            985

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.10  E-value=0.0028  Score=50.49  Aligned_cols=81  Identities=23%  Similarity=0.295  Sum_probs=50.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHH-HHHH--HcCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVD-LLKN--KFGFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~-~~~~--~~g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|+|++|++|..+++.+...|++|++..+ +..+.+ .+.+  ..+...   ..|..+..+..+.+.+..  -++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999999888553 333222 2220  234322   234444312333333221  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.09  E-value=0.0029  Score=51.23  Aligned_cols=91  Identities=13%  Similarity=0.060  Sum_probs=61.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCce----eEecCChhhHHHHHHHHCCC-CccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEADLNAALKRYFPE-GIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~~~~-~~d~  152 (269)
                      ++++++|.|| ||.+.+++.-++..|+ +++++.|+.++.+.+.+.++...    ..+..+          .... .+|+
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~----------~~~~~~~dl  193 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD----------LEGLEEADL  193 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc----------cccccccCE
Confidence            4789999999 9999999999999997 89999999999887775665321    111111          0011 3899


Q ss_pred             EEeCCCch-hHh-----hhHhhhhcCCEEEEEec
Q 024337          153 YFENVGGK-TLD-----AVLPNMKIRGRIAACGM  180 (269)
Q Consensus       153 vid~~g~~-~~~-----~~~~~l~~~G~~v~~g~  180 (269)
                      +|+|++-. .-.     ....++++.-.+..+-.
T Consensus       194 iINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY  227 (283)
T COG0169         194 LINATPVGMAGPEGDSPVPAELLPKGAIVYDVVY  227 (283)
T ss_pred             EEECCCCCCCCCCCCCCCcHHhcCcCCEEEEecc
Confidence            99999741 111     11455666666656543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=97.08  E-value=0.0042  Score=46.52  Aligned_cols=96  Identities=23%  Similarity=0.207  Sum_probs=64.8

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec------------------CC--hhhHH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY------------------KE--EADLN  139 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~------------------~~--~~~~~  139 (269)
                      ..+|+|+|+ |.+|+-++.+++.+|++|+..+...++.+..+ ..+...+...                  -.  .+.+.
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            478999998 99999999999999999999999988888877 6666432220                  01  01233


Q ss_pred             HHHHHHCCCCccEEEeCCC--c-----hhHhhhHhhhhcCCEEEEEeccc
Q 024337          140 AALKRYFPEGIDVYFENVG--G-----KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       140 ~~i~~~~~~~~d~vid~~g--~-----~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +.+.     .+|++|.+.-  +     -.-+..++.|+++..++.++...
T Consensus        98 ~~i~-----~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~  142 (168)
T PF01262_consen   98 EFIA-----PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ  142 (168)
T ss_dssp             HHHH-----H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred             HHHh-----hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence            3333     3798885331  1     12367788899888888876533

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0044  Score=48.60  Aligned_cols=77  Identities=16%  Similarity=0.227  Sum_probs=51.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee--EecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      ..+++|+||+|++|...+..+... .+|++++++.++.+.+.+.......  .|..+..++.+.+...  +++|.+|.++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a   79 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA   79 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence            358999999999999999888777 9999999998776655423321122  3333321222222221  2699999999


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      |.
T Consensus        80 g~   81 (227)
T PRK08219         80 GV   81 (227)
T ss_pred             Cc
Confidence            84

>PRK00811 spermidine synthase; Provisional

Probab=97.06  E-value=0.0065  Score=49.61  Aligned_cols=97  Identities=12%  Similarity=0.043  Sum_probs=64.1

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC-------ceeEecCChhhHHHHHHHHCCCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF-------DEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ...++||+.|+  |.|..+..++++.+. +|.+++.+++-.+.+++.+..       +.-+..... +..+.+.+ .++.
T Consensus        75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence            45689999996  558888888887665 899999999988888854421       111111111 33344443 3458


Q ss_pred             ccEEEeCCC-----------chhHhhhHhhhhcCCEEEEE
Q 024337          150 IDVYFENVG-----------GKTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       150 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  178 (269)
                      ||+|+.-..           .+.++.+.+.|+++|.++.-
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            998875431           12357788999999998864

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=97.03  E-value=0.0048  Score=48.51  Aligned_cols=101  Identities=17%  Similarity=0.209  Sum_probs=72.4

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ...++.+|++|+=.|  .|.|.+++-+++..|.  +|+.....++..+.+++++.   ....+..... |    +.+...
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-D----v~~~~~  160 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-D----VREGID  160 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-c----cccccc
Confidence            457899999999877  4679999999998876  99999999998888776553   3332222211 2    222222


Q ss_pred             C-CccEEE-eCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          148 E-GIDVYF-ENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~-~~d~vi-d~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      + .||.++ |.--. ..++.+.+.|+++|+++.+..
T Consensus       161 ~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         161 EEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             ccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            2 788665 44444 788999999999999998754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.03  E-value=0.006  Score=48.85  Aligned_cols=80  Identities=13%  Similarity=0.171  Sum_probs=50.9

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .++++|.|++|++|..+++.+...|++|++++++.. ..+...+.   .+.. .  ..|..+..++.+.+.+...  +++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            367999999999999999999999999999987533 22222112   2221 1  2455543233333333321  369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.+.|.
T Consensus        82 d~vi~~ag~   90 (256)
T PRK12745         82 DCLVNNAGV   90 (256)
T ss_pred             CEEEECCcc
Confidence            999999873

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.02  E-value=0.013  Score=41.07  Aligned_cols=98  Identities=19%  Similarity=0.269  Sum_probs=66.5

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHHHHHHHCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~i~~~~~  147 (269)
                      ...+.++++++-.|+  |.|..+..+++..+ .+|++++.++...+.+++   .++...  .+..+.    ...... ..
T Consensus        14 ~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~-~~   86 (124)
T TIGR02469        14 KLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA----PEALED-SL   86 (124)
T ss_pred             HcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc----cccChh-hc
Confidence            345677889999996  45999999998874 699999999988877653   233322  222211    111111 12


Q ss_pred             CCccEEEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337          148 EGIDVYFENVGG----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       148 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  178 (269)
                      +++|+++...+.    ..++.+.+.|+++|+++..
T Consensus        87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        87 PEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             CCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            379999876543    4678899999999999875

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=97.01  E-value=0.0029  Score=49.46  Aligned_cols=98  Identities=18%  Similarity=0.221  Sum_probs=66.2

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---cCCce--eEecCChhhHHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKRY  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~i~~~  145 (269)
                      +...++++++||-.|+  |.|..++.+++..+.  +|++++.+++..+.+++.   +|.+.  ++..    +..+...  
T Consensus        71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~----d~~~~~~--  142 (215)
T TIGR00080        71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG----DGTQGWE--  142 (215)
T ss_pred             HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC----CcccCCc--
Confidence            4567899999999995  678888888887654  799999998887776643   34322  2211    1111111  


Q ss_pred             CCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          146 FPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       146 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      ..++||.|+-.... .......+.|+++|+++..
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            11379988755443 5556788999999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.01  E-value=0.00073  Score=55.12  Aligned_cols=145  Identities=20%  Similarity=0.249  Sum_probs=82.7

Q ss_pred             CCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCc-chhHHHHHHHhh-cCCCCCEEEEecCcchHHHHH
Q 024337           19 EFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMP-GMTAYVGFYEVC-SAKHGECVFISAASGAVGQLV   96 (269)
Q Consensus        19 ~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~-~~~a~~~l~~~~-~~~~~~~vlI~ga~g~vG~~~   96 (269)
                      .+++|++.+....|.+|-.-+...++.++|.   +.|     ... -.|...||.... ...++++||=.|.  |.|.++
T Consensus       107 P~~vg~~~~I~P~w~~~~~~~~~~~I~idPg---~AF-----GTG~H~TT~lcl~~l~~~~~~g~~vLDvG~--GSGILa  176 (295)
T PF06325_consen  107 PIRVGDRLVIVPSWEEYPEPPDEIVIEIDPG---MAF-----GTGHHPTTRLCLELLEKYVKPGKRVLDVGC--GSGILA  176 (295)
T ss_dssp             -EEECTTEEEEETT----SSTTSEEEEESTT---SSS------SSHCHHHHHHHHHHHHHSSTTSEEEEES---TTSHHH
T ss_pred             cEEECCcEEEECCCcccCCCCCcEEEEECCC---Ccc-----cCCCCHHHHHHHHHHHHhccCCCEEEEeCC--cHHHHH
Confidence            3566777777777777733234455666343   332     222 233334443332 2678999999995  567777


Q ss_pred             HHHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCceeEe-cCChhhHHHHHHHHCCCCccEEEeCCCc----hhHhhhHh
Q 024337           97 GQFAKLLGC-YVVGSAGSKDKVDLLKNKF---GFDEAFN-YKEEADLNAALKRYFPEGIDVYFENVGG----KTLDAVLP  167 (269)
Q Consensus        97 i~~a~~~G~-~V~~~~~s~~~~~~~~~~~---g~~~~~~-~~~~~~~~~~i~~~~~~~~d~vid~~g~----~~~~~~~~  167 (269)
                      +..++ +|+ +|++++.++...+.++++.   |....+. .... +       ...++||+|+-+.-.    ..+....+
T Consensus       177 iaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~-------~~~~~~dlvvANI~~~vL~~l~~~~~~  247 (295)
T PF06325_consen  177 IAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-D-------LVEGKFDLVVANILADVLLELAPDIAS  247 (295)
T ss_dssp             HHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-C-------TCCS-EEEEEEES-HHHHHHHHHHCHH
T ss_pred             HHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-c-------cccccCCEEEECCCHHHHHHHHHHHHH
Confidence            76666 487 8999998888777666433   2221111 1111 1       112479999977764    34456677


Q ss_pred             hhhcCCEEEEEeccc
Q 024337          168 NMKIRGRIAACGMIS  182 (269)
Q Consensus       168 ~l~~~G~~v~~g~~~  182 (269)
                      .++++|.+++.|...
T Consensus       248 ~l~~~G~lIlSGIl~  262 (295)
T PF06325_consen  248 LLKPGGYLILSGILE  262 (295)
T ss_dssp             HEEEEEEEEEEEEEG
T ss_pred             hhCCCCEEEEccccH
Confidence            888999999988743

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK07402 precorrin-6B methylase; Provisional

Probab=97.01  E-value=0.033  Score=42.82  Aligned_cols=101  Identities=19%  Similarity=0.225  Sum_probs=64.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCce--eEecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~i~~~~  146 (269)
                      ....+.++++|+=.|+  |.|..++.+++.. +.+|++++.+++..+.++++   ++...  ++..    +..+.+....
T Consensus        34 ~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~~  107 (196)
T PRK07402         34 SQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQLA  107 (196)
T ss_pred             HhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhCC
Confidence            4456778999988885  5677777777654 56999999999988877643   44432  2222    2222222221


Q ss_pred             CCCcc-EEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGID-VYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d-~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       ..+| +.++....  ..++.+.+.|+++|+++....
T Consensus       108 -~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        108 -PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             -CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence             2234 44443322  567888999999999987643

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.00  E-value=0.0067  Score=52.01  Aligned_cols=104  Identities=17%  Similarity=0.172  Sum_probs=64.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHc-CCce-eEecCChhhHHHHHHHHCCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD------LLKNKF-GFDE-AFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~------~~~~~~-g~~~-~~~~~~~~~~~~~i~~~~~~  148 (269)
                      -..+.+|+|+||+|.+|..+++.+...|.+|++++++..+.+      ...+.. +... ..|..+..++.+.+++. +.
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~  135 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GD  135 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CC
Confidence            356789999999999999999999889999999998865431      111011 2222 34555441333333322 11


Q ss_pred             CccEEEeCCCch------h-------HhhhHhhhhcC--CEEEEEecc
Q 024337          149 GIDVYFENVGGK------T-------LDAVLPNMKIR--GRIAACGMI  181 (269)
Q Consensus       149 ~~d~vid~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~  181 (269)
                      ++|+||+|++..      .       ....++.++..  +++|.++..
T Consensus       136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            699999998731      0       12333444433  478887754

>PLN02366 spermidine synthase

Probab=96.99  E-value=0.0088  Score=49.33  Aligned_cols=99  Identities=15%  Similarity=0.104  Sum_probs=64.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC------ceeEecCChhhHHHHHHHHCCCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~------~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .+.++||+.|+  |-|..+..++++-+. +|.++..+++-.+.+++.+..      +.-+..... +..+.+++..++.|
T Consensus        90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y  166 (308)
T PLN02366         90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY  166 (308)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence            56789999996  447777788887665 899999888878888744431      111111111 33444444334479


Q ss_pred             cEEEeCCCc-----------hhHhhhHhhhhcCCEEEEEe
Q 024337          151 DVYFENVGG-----------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       151 d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      |+||--...           +.++.+.+.|+++|.++.-.
T Consensus       167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            987653221           34778899999999987643

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.99  E-value=0.0027  Score=48.90  Aligned_cols=98  Identities=14%  Similarity=0.017  Sum_probs=62.8

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ....++.+||-.|+  |.|..+..+++. |.+|++++.|++..+.+++..   +... ++.... ++.+.   ..++.||
T Consensus        26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~---~~~~~fD   97 (197)
T PRK11207         26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL---TFDGEYD   97 (197)
T ss_pred             cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC---CcCCCcC
Confidence            34556789999996  568888888875 889999999998777665322   2221 111111 22111   1123799


Q ss_pred             EEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          152 VYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       152 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +|+.+..-         ..+..+.+.|+++|.++.+..
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~  135 (197)
T PRK11207         98 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA  135 (197)
T ss_pred             EEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence            99876431         346778889999999765543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.98  E-value=0.012  Score=43.89  Aligned_cols=94  Identities=14%  Similarity=0.070  Sum_probs=60.1

Q ss_pred             cCCcchhHHHHHHHhhcCCCCCEEEEecCcch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337           60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGA-VGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL  138 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~-vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~  138 (269)
                      .|+....+...+.....--.+.+|+|.|+ |. +|..++..++..|++|+++.++.+                     +.
T Consensus        24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l   81 (168)
T cd01080          24 IPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------NL   81 (168)
T ss_pred             cCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------hH
Confidence            34443444444433333357899999999 65 599999999999999888886532                     22


Q ss_pred             HHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          139 NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       139 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .+.+.     .+|+||.+++...+ .-.+.++++-.++.++.+
T Consensus        82 ~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~p  118 (168)
T cd01080          82 KEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGIN  118 (168)
T ss_pred             HHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCC
Confidence            23333     37999999997332 222346666566666653

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.98  E-value=0.029  Score=37.49  Aligned_cols=86  Identities=21%  Similarity=0.207  Sum_probs=58.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLG---CYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G---~~V~~~-~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +|.|.|+ |.+|.+.+.-+...|   .+|+.+ .+++++.+.+.++++......     +..+.+++     .|++|-|+
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav   69 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV   69 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence            4778887 999999999999999   799955 999999988875777543221     22333433     79999999


Q ss_pred             CchhHhhhHhhh---hcCCEEEEE
Q 024337          158 GGKTLDAVLPNM---KIRGRIAAC  178 (269)
Q Consensus       158 g~~~~~~~~~~l---~~~G~~v~~  178 (269)
                      ....+...++.+   .++..++.+
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            986665555544   345555544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.97  E-value=0.014  Score=47.68  Aligned_cols=75  Identities=15%  Similarity=0.086  Sum_probs=50.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      ++++++|+|+ ||.+.+++..+...|+ +++++.|+.++.+.+.+.+...   ..+...+..++.+.+     ..+|+++
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~-----~~~divI  199 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI-----AAADGVV  199 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHH-----hhcCEEE
Confidence            4678999998 9999999999888998 8999999988877765454321   011111100111111     2489999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      ||++-
T Consensus       200 NaTp~  204 (283)
T PRK14027        200 NATPM  204 (283)
T ss_pred             EcCCC
Confidence            99973

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.97  E-value=0.0043  Score=52.32  Aligned_cols=76  Identities=16%  Similarity=0.242  Sum_probs=50.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----c-eeEecCChhhHHHHHHHHCCC-CccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----D-EAFNYKEEADLNAALKRYFPE-GIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~-~~~~~~~~~~~~~~i~~~~~~-~~d~  152 (269)
                      ++++|||+||+|.+|..+++.+...|.+|++++++........+.++.    . ...|..+. +   .+.+...+ ++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~---~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-A---KLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-H---HHHHHHhhcCCCE
Confidence            468999999999999999999999999999998776543322112221    1 12243332 2   22232223 6899


Q ss_pred             EEeCCC
Q 024337          153 YFENVG  158 (269)
Q Consensus       153 vid~~g  158 (269)
                      ||.+++
T Consensus        79 vih~A~   84 (349)
T TIGR02622        79 VFHLAA   84 (349)
T ss_pred             EEECCc
Confidence            999997

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=96.96  E-value=0.019  Score=45.67  Aligned_cols=104  Identities=13%  Similarity=0.108  Sum_probs=71.7

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      |....+..+.++||-.|  +.+|+.++.+|+.+  +.+|+.+..+++..+.+++   +.|...-++.... +..+.+.++
T Consensus        71 L~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l  147 (247)
T PLN02589         71 LNMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQM  147 (247)
T ss_pred             HHHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHH
Confidence            43446667788999998  58899999999886  4699999999887777654   4465443443333 444555543


Q ss_pred             C-----CCCccEEE-eCCCc---hhHhhhHhhhhcCCEEEE
Q 024337          146 F-----PEGIDVYF-ENVGG---KTLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       146 ~-----~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~  177 (269)
                      .     .+.||+|| |+--.   ..++.++++|++||.++.
T Consensus       148 ~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        148 IEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             HhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence            2     24799775 44433   567788999999997764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.95  E-value=0.0069  Score=48.24  Aligned_cols=81  Identities=20%  Similarity=0.269  Sum_probs=50.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+|++|++|..+++.+...|++|+++.+ ++++.+...+.   .+...   ..|..+...+.+.+.+...  +.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999889999987654 34443332212   23221   2344433133333333321  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|+++.++|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999999984

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.95  E-value=0.0076  Score=49.39  Aligned_cols=96  Identities=10%  Similarity=0.082  Sum_probs=57.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHcCC---c---eeEecCChhhHHHHHHHHCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK---DKVDLLKNKFGF---D---EAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~---~~~~~~~~~~g~---~---~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ++++++|+|+ ||+|.+++..+...|+ +|+++.|+.   ++.+.+.+++..   .   ...+..+.    +.+.+.. .
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~----~~~~~~~-~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDT----EKLKAEI-A  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhh----hHHHhhh-c
Confidence            4689999999 8999999998889999 599999985   454443324421   1   11222221    1222211 1


Q ss_pred             CccEEEeCCCchhH------hh-hHhhhhcCCEEEEEec
Q 024337          149 GIDVYFENVGGKTL------DA-VLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vid~~g~~~~------~~-~~~~l~~~G~~v~~g~  180 (269)
                      .+|++++|++-...      .. ....+.++..++.+-.
T Consensus       199 ~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  237 (289)
T PRK12548        199 SSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY  237 (289)
T ss_pred             cCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence            47999999963111      01 1344666666665533

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.94  E-value=0.0077  Score=47.64  Aligned_cols=70  Identities=19%  Similarity=0.308  Sum_probs=51.1

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      |+|+||+|.+|..+++.+...+.+|.+.+|+..  ..+.++ ..|+..+ .|+.+.    +.+.+... ++|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~----~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDP----ESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-H----HHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCH----HHHHHHHc-CCceEEeecC
Confidence            789999999999999999998999999998764  355666 7788532 334332    33333222 6999999998

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.013  Score=45.06  Aligned_cols=87  Identities=16%  Similarity=0.157  Sum_probs=56.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch-
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-  160 (269)
                      +++|.|+++++|..++..+... .+|+.++++..           ...+|..+.++..+.+.+.  +++|+++.++|.. 
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~~~   67 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAGKVH   67 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCCCCC
Confidence            6899999999999988888777 99999987643           1233444431333333332  3689999988731 


Q ss_pred             -------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          161 -------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       161 -------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                                               ..+.+++.+.++|+++.++...
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~  114 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL  114 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence                                     0233344556678888876543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.93  E-value=0.0058  Score=49.40  Aligned_cols=79  Identities=16%  Similarity=0.155  Sum_probs=49.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHcC----Cc---eeEecCChhhH---HHH-HHHHC--
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKFG----FD---EAFNYKEEADL---NAA-LKRYF--  146 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~g----~~---~~~~~~~~~~~---~~~-i~~~~--  146 (269)
                      .+++|+||++++|..+++.+...|++|+++++. +++.+.+.+++.    ..   ...|..+.+..   .+. +.+..  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            478999999999999999999999999988653 444443322332    11   12344443111   122 22221  


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      -+++|+++.++|.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence            1379999999883

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.93  E-value=0.0099  Score=50.93  Aligned_cols=90  Identities=17%  Similarity=0.209  Sum_probs=58.5

Q ss_pred             EEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc-CCc---eeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF-GFD---EAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~-g~~---~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      |+|+|+ |.+|..+++.+...+-  +|++.+++.++.+.+.+++ +..   ..+|..+..+    +.+... +.|+|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence            789999 9999999999987764  8999999999987776342 221   2445544312    333322 46999999


Q ss_pred             CCc-hhHhhhHhhhhcCCEEEEE
Q 024337          157 VGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       157 ~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      +|. .....+..+++.+-.++..
T Consensus        75 ~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CccchhHHHHHHHHHhCCCeecc
Confidence            997 4555566667778888874

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.92  E-value=0.0025  Score=46.40  Aligned_cols=96  Identities=16%  Similarity=0.180  Sum_probs=64.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh-----hhHHHHHHHHCCC-CccEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-----ADLNAALKRYFPE-GIDVY  153 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~i~~~~~~-~~d~v  153 (269)
                      ..+|+|+|+-|.+|.++++..|..++-|.-++.++.+..      ...-+++.+..     ....+++-+...+ ++|.|
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav   76 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV   76 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc------cceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence            357999999999999999999999998888886654222      12224443331     0223334444555 99999


Q ss_pred             EeCCCch---h------------------------HhhhHhhhhcCCEEEEEecc
Q 024337          154 FENVGGK---T------------------------LDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       154 id~~g~~---~------------------------~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |+-+|+-   .                        ...+-..|+++|-+-+.|..
T Consensus        77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk  131 (236)
T KOG4022|consen   77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK  131 (236)
T ss_pred             EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence            9988751   0                        13455678899988777653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.91  E-value=0.0067  Score=50.19  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC-CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF-PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~-~~~~  150 (269)
                      ++++++|+||++++|...++.+...|++|++.+++. ++.+.+.+   ..|...   ..|..+.++....+.... -+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999988643 23322221   223221   223433312222222211 2479


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999984

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.90  E-value=0.0092  Score=52.75  Aligned_cols=73  Identities=15%  Similarity=0.138  Sum_probs=54.1

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+.++++|+|+|. |..|++++++++..|++|++.+..+++.+.++ ++|+. ++...   ...+.+.     .+|+|+.
T Consensus         8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l~-----~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQIA-----DYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHhh-----cCCEEEE
Confidence            3567899999998 99999999999999999999997766666666 67773 33221   1112222     3799999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      +.|-
T Consensus        77 SpGi   80 (488)
T PRK03369         77 SPGF   80 (488)
T ss_pred             CCCC
Confidence            8884

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.88  E-value=0.0076  Score=48.12  Aligned_cols=75  Identities=19%  Similarity=0.281  Sum_probs=50.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      ++++++|+|++|++|..+++.+...|++|++++++.     .. ..+..   ...|..+.+++.+.+.+..  .+++|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999999999999999875     22 22221   1234444313333333321  1368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |.+.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999884

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0083  Score=47.79  Aligned_cols=80  Identities=20%  Similarity=0.220  Sum_probs=50.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +.+++|+|++|++|..+++.+...|++|+.+. +++++.+...+   ..+..   ...|..+..++.+.+.+...  +++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999988999887765 34444333221   22332   12344443233333333221  378


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |+++.++|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06123         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999999984

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.86  E-value=0.011  Score=44.83  Aligned_cols=39  Identities=18%  Similarity=0.183  Sum_probs=32.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      +|.|.|+ |.+|...+.++...|.+|...+.+++..+..+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~   39 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR   39 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence            5889998 99999999999999999999999999776554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.86  E-value=0.0087  Score=47.68  Aligned_cols=79  Identities=22%  Similarity=0.154  Sum_probs=49.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++++|.||+|++|..+++.+...|++|+++. +++++.+...+   ..+.. .  ..|..+..+..+.+.+..  -+++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            5899999999999999999999999987765 45444333221   22322 1  234443323333333322  13699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|.++|.
T Consensus        83 ~li~~ag~   90 (248)
T PRK06947         83 ALVNNAGI   90 (248)
T ss_pred             EEEECCcc
Confidence            99999973

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.84  E-value=0.0094  Score=47.30  Aligned_cols=80  Identities=21%  Similarity=0.299  Sum_probs=50.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +.++++|+||+|++|..+++.+...|.+|+++.++.+ ..+.+.+   ..+.. .  ..|..+..++.+.+.+...  ++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            3568999999999999999999999999887665544 2222221   22221 1  2344443133333332211  36


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|.+|.++|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            999999988

>PLN02244 tocopherol O-methyltransferase

Probab=96.82  E-value=0.0095  Score=50.05  Aligned_cols=98  Identities=15%  Similarity=0.153  Sum_probs=65.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +++++||-+|+  |.|..+..+++..|++|++++.++...+.+++.   .+...-+..... +..+ + ....+.||+|+
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~  191 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW  191 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence            67889999986  667888889988899999999999887766532   233211111111 1110 0 01224799998


Q ss_pred             eCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          155 ENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       155 d~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .....       ..+.++.+.|+++|+++....
T Consensus       192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            64432       357788999999999998754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.80  E-value=0.0034  Score=46.79  Aligned_cols=92  Identities=21%  Similarity=0.264  Sum_probs=62.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +|.|+||+|-+|....+=|+..|-+|+++.|++.+....+ ...+  ..++|..   ...+.+     .++|+||++.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence            6899999999999999999999999999999998876543 2211  1233322   112222     269999999885


Q ss_pred             h----------hHhhhHhhhhcC--CEEEEEeccc
Q 024337          160 K----------TLDAVLPNMKIR--GRIAACGMIS  182 (269)
Q Consensus       160 ~----------~~~~~~~~l~~~--G~~v~~g~~~  182 (269)
                      .          ..+..+..|+.-  -|++.+|.-+
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            2          123345555552  4777777643

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.79  E-value=0.016  Score=46.53  Aligned_cols=97  Identities=13%  Similarity=0.152  Sum_probs=63.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      .++.+||-.|+  |.|..+..+++. |.+|++++.+++..+.+++.+   |...-+..... +..+ +.....+.||+|+
T Consensus        43 ~~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~  117 (255)
T PRK11036         43 PRPLRVLDAGG--GEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL  117 (255)
T ss_pred             CCCCEEEEeCC--CchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence            45678998885  678888888875 889999999999888877433   22111111111 2211 2222234799998


Q ss_pred             eCCC-----c--hhHhhhHhhhhcCCEEEEEe
Q 024337          155 ENVG-----G--KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       155 d~~g-----~--~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ....     .  ..+..+.+.|+++|.++.+-
T Consensus       118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            6533     1  45788999999999998653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.78  E-value=0.012  Score=47.24  Aligned_cols=43  Identities=23%  Similarity=0.290  Sum_probs=34.5

Q ss_pred             EEEEecCcchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHc
Q 024337           82 CVFISAASGAVGQLVGQFAKL----LGCYVVGSAGSKDKVDLLKNKF  124 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~----~G~~V~~~~~s~~~~~~~~~~~  124 (269)
                      .++|+|+++++|..++..+..    .|++|+.+.+++++.+.+.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l   48 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI   48 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence            589999999999988876654    7999999999988776654333

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=96.78  E-value=0.018  Score=46.83  Aligned_cols=73  Identities=18%  Similarity=0.207  Sum_probs=47.5

Q ss_pred             EEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC----Ccee--------EecCChhhHHHHHHHHCCC-
Q 024337           83 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG----FDEA--------FNYKEEADLNAALKRYFPE-  148 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g----~~~~--------~~~~~~~~~~~~i~~~~~~-  148 (269)
                      |||+||+|.+|...++.+...+. +++++++++.++-.+++++.    ...+        -|.+    ..+.+.+.... 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr----d~~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR----DKERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC----HHHHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc----CHHHHHHHHhhc
Confidence            79999999999999988888886 89999999998777766662    1111        1222    23455555555 


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|+||.++.-
T Consensus        77 ~pdiVfHaAA~   87 (293)
T PF02719_consen   77 KPDIVFHAAAL   87 (293)
T ss_dssp             T-SEEEE----
T ss_pred             CCCEEEEChhc
Confidence            89999998874

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.77  E-value=0.081  Score=43.97  Aligned_cols=40  Identities=18%  Similarity=-0.012  Sum_probs=34.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL  120 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~  120 (269)
                      -++|.|.|+ |.+|...++.+...|.+|++.+.+++..+.+
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~   46 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAAL   46 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            367999998 9999999999999999999999998765543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.76  E-value=0.011  Score=46.89  Aligned_cols=79  Identities=14%  Similarity=0.133  Sum_probs=51.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++++|+||+|++|...++.+...|++|+++ .+++++.+....   ..+..   ...|..+.++..+.+.+..  .+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            479999999999999999998899998774 455554433221   22321   1335544423333344332  24799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +++.++|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999984

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.0093  Score=47.86  Aligned_cols=81  Identities=16%  Similarity=0.155  Sum_probs=50.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----KDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s----~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--  146 (269)
                      .+.+++|+|++|++|..+++.+...|++|++++++    .+..+.+.+   ..+..   ...|..+..+..+.+.+..  
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999997777543    222222211   22322   1235544323333333322  


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      .+++|++|+++|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            1379999999984

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.74  E-value=0.016  Score=48.37  Aligned_cols=76  Identities=13%  Similarity=0.124  Sum_probs=49.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCCc--e--eEecCChhhHHHHHHHHCCCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ++.+|||+||+|.+|..+++.+...|  .+|++++++..+...+.+.+...  .  ..|..+. +   .+.+... ++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~---~l~~~~~-~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK-E---RLTRALR-GVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH-H---HHHHHHh-cCCE
Confidence            46889999999999999999887765  68998887766544333233221  1  2244443 2   2222221 4899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +|.++|.
T Consensus        78 Vih~Ag~   84 (324)
T TIGR03589        78 VVHAAAL   84 (324)
T ss_pred             EEECccc
Confidence            9999873

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.74  E-value=0.043  Score=42.35  Aligned_cols=80  Identities=19%  Similarity=0.289  Sum_probs=55.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++.+++|.|. |.+|..+++.+...|++|+++++++++.+.+.+.+++. .++..   ++       ....+|+++-|+.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l-------~~~~~Dv~vp~A~   94 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EI-------YSVDADVFAPCAL   94 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hh-------ccccCCEEEeccc
Confidence            5789999998 89999999999999999999998888877776465643 33221   11       1115899997665


Q ss_pred             c-hhHhhhHhhhh
Q 024337          159 G-KTLDAVLPNMK  170 (269)
Q Consensus       159 ~-~~~~~~~~~l~  170 (269)
                      + ..-...++.|+
T Consensus        95 ~~~I~~~~~~~l~  107 (200)
T cd01075          95 GGVINDDTIPQLK  107 (200)
T ss_pred             ccccCHHHHHHcC
Confidence            4 23333344453

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.0083  Score=47.19  Aligned_cols=74  Identities=16%  Similarity=0.223  Sum_probs=50.9

Q ss_pred             EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCc-e--eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        84 lI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|+||+|++|...++.+...|++|+++++++++.+.+.+.+  +.. .  ..|..+..++...+.+ . +++|.+++++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~-~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE-A-GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh-c-CCCCEEEECCC
Confidence            58999999999999999999999999999877765544233  221 1  2354444133333332 2 36899999987


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus        79 ~   79 (230)
T PRK07041         79 D   79 (230)
T ss_pred             C
Confidence            4

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=96.73  E-value=0.026  Score=45.55  Aligned_cols=98  Identities=18%  Similarity=0.194  Sum_probs=66.4

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCC------c--eeEecCChhhHHHHHHH
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFGF------D--EAFNYKEEADLNAALKR  144 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~g~------~--~~~~~~~~~~~~~~i~~  144 (269)
                      ..+.++++||-.|+  |.|..+..+++..+  .+|++++.+++..+.++++...      .  ..+..+.. +    + .
T Consensus        69 ~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~-~----l-p  140 (261)
T PLN02233         69 SGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDAT-D----L-P  140 (261)
T ss_pred             hCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccc-c----C-C
Confidence            46788999999997  55677788888765  5999999999998888643321      1  11111110 1    1 0


Q ss_pred             HCCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          145 YFPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       145 ~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..++.||.|+...+-       ..++++.+.|+|+|+++....
T Consensus       141 ~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~  183 (261)
T PLN02233        141 FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF  183 (261)
T ss_pred             CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence            112379999765431       457899999999999988765

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.013  Score=46.63  Aligned_cols=77  Identities=18%  Similarity=0.167  Sum_probs=50.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHH----H-CC-CCcc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKR----Y-FP-EGID  151 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~----~-~~-~~~d  151 (269)
                      .+++|+||+|++|..+++.+...|++|++++++.++. ... ..+..   ...|..+.+++...+.+    . .. ++.|
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            3799999999999999999988999999999875532 222 33322   13455543233332222    1 22 2689


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      .++.+.|.
T Consensus        80 ~~v~~ag~   87 (243)
T PRK07023         80 LLINNAGT   87 (243)
T ss_pred             EEEEcCcc
Confidence            99998873

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.72  E-value=0.035  Score=46.10  Aligned_cols=87  Identities=23%  Similarity=0.194  Sum_probs=64.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|+++.|.|- |.+|.+.++.++.+|++|+...++.. .+..+ .+++.++       ++.+.+++     .|++.-+++
T Consensus       145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~P  209 (324)
T COG1052         145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHCP  209 (324)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeCC
Confidence            4889999997 99999999999999999999998865 22222 4444432       34444443     788877776


Q ss_pred             c--hh----HhhhHhhhhcCCEEEEEec
Q 024337          159 G--KT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      .  ++    -...+..|++++.+|.++.
T Consensus       210 lt~~T~hLin~~~l~~mk~ga~lVNtaR  237 (324)
T COG1052         210 LTPETRHLINAEELAKMKPGAILVNTAR  237 (324)
T ss_pred             CChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence            3  22    2467888999999998866

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.72  E-value=0.025  Score=45.94  Aligned_cols=93  Identities=18%  Similarity=0.136  Sum_probs=65.1

Q ss_pred             cCCcchhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337           60 LGMPGMTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL  138 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~  138 (269)
                      +||+....+..+ +..++ -.|.+++|.|.+.-+|.-+++++...|++|++..+...                     ++
T Consensus       138 ~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l  195 (286)
T PRK14175        138 VPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM  195 (286)
T ss_pred             CCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            455555555555 33332 47899999999666999999999999999998874321                     23


Q ss_pred             HHHHHHHCCCCccEEEeCCCch-hHhhhHhhhhcCCEEEEEecc
Q 024337          139 NAALKRYFPEGIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       139 ~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .+.++     ..|++|.++|.. .+..  +.++++..++.+|..
T Consensus       196 ~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        196 ASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             HHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence            33333     379999999974 3333  468888888888774

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.72  E-value=0.0084  Score=46.75  Aligned_cols=100  Identities=13%  Similarity=0.096  Sum_probs=63.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE---------ecCChhhHHHHHHHHC--
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF---------NYKEEADLNAALKRYF--  146 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~i~~~~--  146 (269)
                      .++.+||+.|+  |.|.-++-+|. +|.+|++++.|+...+.+.++.+.....         ....-.-....+.+..  
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            57789999997  67888888875 6999999999999888764344432100         0000000000111111  


Q ss_pred             -CCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          147 -PEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 -~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       .+.||.++|+.--         ..+....++|+++|+++....
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence             1368999997641         346788999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PLN00016 RNA-binding protein; Provisional

Probab=96.72  E-value=0.019  Score=49.10  Aligned_cols=97  Identities=19%  Similarity=0.182  Sum_probs=62.4

Q ss_pred             CCCCEEEEe----cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHHcCCceeEecCChhhHHHHH
Q 024337           78 KHGECVFIS----AASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL-----------LKNKFGFDEAFNYKEEADLNAAL  142 (269)
Q Consensus        78 ~~~~~vlI~----ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~i  142 (269)
                      ....+|||+    ||+|-+|..++..+...|.+|++++++......           +. ..+.. .+-.    +..+ +
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~-~v~~----D~~d-~  122 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVK-TVWG----DPAD-V  122 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCce-EEEe----cHHH-H
Confidence            345789999    999999999999999899999999988654221           11 22332 2212    2222 2


Q ss_pred             HHHCCC-CccEEEeCCCc--hhHhhhHhhhhcC--CEEEEEecc
Q 024337          143 KRYFPE-GIDVYFENVGG--KTLDAVLPNMKIR--GRIAACGMI  181 (269)
Q Consensus       143 ~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~--G~~v~~g~~  181 (269)
                      .+.... ++|+|+++.+.  ......++.++..  .++|.++..
T Consensus       123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            222223 79999999875  3344555555543  378877654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.70  E-value=0.01  Score=47.63  Aligned_cols=35  Identities=17%  Similarity=0.114  Sum_probs=30.8

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ++++++|+||+  |++|...+..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            45789999998  489999999988899999999876

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.70  E-value=0.02  Score=47.47  Aligned_cols=89  Identities=18%  Similarity=0.303  Sum_probs=60.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+|.|+|+ |.+|.+.++.++..|.  +|++.++++++.+.++ +.|......  .  +..+.+     ..+|+|+.|++
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~--~--~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT--T--SAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec--C--CHHHHh-----cCCCEEEECCC
Confidence            67999997 9999999999988885  8999999999888887 777532111  1  222222     24899999998


Q ss_pred             chh----HhhhHhhhhcCCEEEEEec
Q 024337          159 GKT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      ...    +......++++..++.++.
T Consensus        76 ~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            633    2333344556665555544

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.68  E-value=0.07  Score=45.56  Aligned_cols=93  Identities=24%  Similarity=0.335  Sum_probs=64.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      -.+.++||.|+ |-+|..++..+...|. +|++..|+.++.+.+.+++|.. +...+   +....+.     .+|+||.+
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhh-----hCCEEEEe
Confidence            36889999999 9999999999999996 8999999999887766699953 32222   3333343     38999999


Q ss_pred             CCchh----HhhhHhhhhcCCE--EEEEec
Q 024337          157 VGGKT----LDAVLPNMKIRGR--IAACGM  180 (269)
Q Consensus       157 ~g~~~----~~~~~~~l~~~G~--~v~~g~  180 (269)
                      +|...    .....+.++..-+  ++.++.
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiav  275 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAV  275 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence            99632    2334444454333  344444

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.68  E-value=0.0088  Score=46.21  Aligned_cols=91  Identities=10%  Similarity=0.018  Sum_probs=56.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCceeEecCChhhHHH-HHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEADLNA-ALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~~~~d~vid~  156 (269)
                      .+.+|+|.|| |.+|...++.+...|++|+++.+... ....+. .-+. -.+...   .+.+ .+     .++|+||-|
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~---~~~~~~l-----~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQK---EFEPSDI-----VDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEec---CCChhhc-----CCceEEEEc
Confidence            5789999999 99999999988889999998875432 222222 1121 111111   1111 11     258999999


Q ss_pred             CCchhHhhhHhhhhcCCEEEEEec
Q 024337          157 VGGKTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++...++..+......+.++....
T Consensus        78 T~d~elN~~i~~~a~~~~lvn~~d  101 (202)
T PRK06718         78 TNDPRVNEQVKEDLPENALFNVIT  101 (202)
T ss_pred             CCCHHHHHHHHHHHHhCCcEEECC
Confidence            998666555554444455665533

>TIGR00477 tehB tellurite resistance protein TehB

Probab=96.67  E-value=0.008  Score=46.22  Aligned_cols=99  Identities=12%  Similarity=0.059  Sum_probs=62.1

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ......++.+||-.|+  |.|..+..+++ .|.+|++++.+++..+.+++.   .+..  +..... +... . . .++.
T Consensus        24 ~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~   94 (195)
T TIGR00477        24 EAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNED   94 (195)
T ss_pred             HHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCC
Confidence            3344556678999996  67888888887 588999999998877766522   2222  111111 1110 0 0 1236


Q ss_pred             ccEEEeCCC-----c----hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVG-----G----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+.+.-     .    ..+..+.+.|+++|.++.+..
T Consensus        95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~  134 (195)
T TIGR00477        95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA  134 (195)
T ss_pred             CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            999976532     1    356788889999999665543

Part of a tellurite-reducing operon tehA and tehB

>PLN03075 nicotianamine synthase; Provisional

Probab=96.67  E-value=0.023  Score=46.32  Aligned_cols=97  Identities=11%  Similarity=0.022  Sum_probs=66.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCC----ceeEecCChhhHHHHHHHHCCCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      +.++|+-.|. |+.|+.++.+++.+  +.+++.++.+++..+.+++.+..    ...+..... +..+....  .++||+
T Consensus       123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV  198 (296)
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence            7799999996 88898888888655  45899999999998888754422    222222222 22221111  247999


Q ss_pred             EEeCC------Cc--hhHhhhHhhhhcCCEEEEEe
Q 024337          153 YFENV------GG--KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       153 vid~~------g~--~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ||..+      ..  ..+....+.|++||.++.-.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            98875      22  56788999999999888654

>PRK14982 acyl-ACP reductase; Provisional

Probab=96.67  E-value=0.016  Score=48.26  Aligned_cols=93  Identities=17%  Similarity=0.197  Sum_probs=62.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKL-LGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~-~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      -.+.+|+|+||+|.+|..+++.+.. .|. +++.+.++.++...+.++++...+.      ++.+.+.     ..|+|+.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEE
Confidence            3678999999999999999988864 565 8999999888877766455422111      2222222     4899999


Q ss_pred             CCCc-hhHhhhHhhhhcCCEEEEEecc
Q 024337          156 NVGG-KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       156 ~~g~-~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +++. ..+..-.+.+++.-.++.++.+
T Consensus       222 ~ts~~~~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        222 VASMPKGVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             CCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence            9986 3322222455666666666654

>PRK00536 speE spermidine synthase; Provisional

Probab=96.66  E-value=0.0073  Score=48.39  Aligned_cols=99  Identities=17%  Similarity=0.030  Sum_probs=65.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCCCccEE-Ee
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPEGIDVY-FE  155 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~v-id  155 (269)
                      ...++|||.||  |=|..+-.++|+-. +|..+.-+++-.+.+++-+.. ...++.-.- .+...+.+...+.||+| +|
T Consensus        71 ~~pk~VLIiGG--GDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvD  146 (262)
T PRK00536         71 KELKEVLIVDG--FDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICL  146 (262)
T ss_pred             CCCCeEEEEcC--CchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEc
Confidence            44589999995  66888889999865 999999898888888832332 111221111 11122333333579966 55


Q ss_pred             CCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          156 NVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..-. +.++.+.+.|+++|.++.-+.
T Consensus       147 s~~~~~fy~~~~~~L~~~Gi~v~Qs~  172 (262)
T PRK00536        147 QEPDIHKIDGLKRMLKEDGVFISVAK  172 (262)
T ss_pred             CCCChHHHHHHHHhcCCCcEEEECCC
Confidence            4544 677889999999999987543

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.66  E-value=0.015  Score=46.05  Aligned_cols=79  Identities=14%  Similarity=0.177  Sum_probs=49.7

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcC---Cc-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFG---FD-E--AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g---~~-~--~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++++|+|++|++|..+++.+...|++|+.++++.+ ..+...+.+.   .. .  ..|..+.+...+.+.+..  -+++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999999888999999998743 1221211222   11 1  234444312333233221  13699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +++.++|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12824         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999974

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.65  E-value=0.069  Score=37.06  Aligned_cols=92  Identities=20%  Similarity=0.133  Sum_probs=62.6

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch--
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK--  160 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~--  160 (269)
                      |+|.|. |.+|...++.++..+.+|++++.++++.+.++ +.|.. ++..+.  .-.+.+++..-..++.++-+++.+  
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~gd~--~~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYGDA--TDPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES-T--TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-cccccc--hhhhHHhhcCccccCEEEEccCCHHH
Confidence            578898 99999999999997779999999999999998 77754 444333  223344444333789999888863  


Q ss_pred             h--HhhhHhhhhcCCEEEEEe
Q 024337          161 T--LDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       161 ~--~~~~~~~l~~~G~~v~~g  179 (269)
                      .  +....+.+.+..+++...
T Consensus        76 n~~~~~~~r~~~~~~~ii~~~   96 (116)
T PF02254_consen   76 NLLIALLARELNPDIRIIARV   96 (116)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEE
T ss_pred             HHHHHHHHHHHCCCCeEEEEE
Confidence            2  223444455666766543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.014  Score=46.37  Aligned_cols=81  Identities=22%  Similarity=0.232  Sum_probs=49.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG----SKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~----s~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~--  146 (269)
                      ++.+++|+||+|++|...++.+...|++|+++.+    +.++.+.+.++   .+.. .  ..|..+.......+.+..  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999899999988664    33333322212   2222 1  234443312223232221  


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      .+++|.+|.++|.
T Consensus        85 ~~~~d~vi~~ag~   97 (249)
T PRK12827         85 FGRLDILVNNAGI   97 (249)
T ss_pred             hCCCCEEEECCCC
Confidence            1369999999984

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.61  E-value=0.011  Score=49.16  Aligned_cols=39  Identities=15%  Similarity=0.267  Sum_probs=33.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV  117 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~  117 (269)
                      .++++||+||+|.+|..++..+...|.+|+++.++.++.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~   42 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR   42 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence            468999999999999999999999999999888776543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.59  E-value=0.021  Score=48.27  Aligned_cols=79  Identities=15%  Similarity=0.127  Sum_probs=49.9

Q ss_pred             CCCCEEEEecCcchHHHH--HHHHHHHcCCEEEEEeCCHH--H-------------HH-HHHHHcCCc-ee--EecCChh
Q 024337           78 KHGECVFISAASGAVGQL--VGQFAKLLGCYVVGSAGSKD--K-------------VD-LLKNKFGFD-EA--FNYKEEA  136 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~--~i~~a~~~G~~V~~~~~s~~--~-------------~~-~~~~~~g~~-~~--~~~~~~~  136 (269)
                      ..++++||+|+++++|++  +++.+ ..|++|+++....+  +             .+ .++ +.|.. ..  .|..+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            446899999999999999  67777 88999888874221  1             22 333 55643 22  2444431


Q ss_pred             hHH---HHHHHHCCCCccEEEeCCCc
Q 024337          137 DLN---AALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus       137 ~~~---~~i~~~~~~~~d~vid~~g~  159 (269)
                      ...   +.+.+.. |++|+++++++.
T Consensus       117 ~v~~lie~I~e~~-G~IDiLVnSaA~  141 (398)
T PRK13656        117 IKQKVIELIKQDL-GQVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCcc
Confidence            222   2333322 479999999985

>PRK04457 spermidine synthase; Provisional

Probab=96.59  E-value=0.044  Score=44.27  Aligned_cols=97  Identities=13%  Similarity=0.134  Sum_probs=65.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCCccEE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      .+.++||+.|+  |.|..+..+++.. +.+|++++.+++-.+.+++.++..   .-+..... +..+.+.+. +++||+|
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence            45678999996  4588888888876 569999999999999988666542   11111122 444444432 3479987


Q ss_pred             E-eCCC----------chhHhhhHhhhhcCCEEEEE
Q 024337          154 F-ENVG----------GKTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       154 i-d~~g----------~~~~~~~~~~l~~~G~~v~~  178 (269)
                      + |...          .+.++.+.+.|+++|.++.-
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            6 3321          14567888999999998863

>PRK14967 putative methyltransferase; Provisional

Probab=96.58  E-value=0.028  Score=44.21  Aligned_cols=95  Identities=21%  Similarity=0.102  Sum_probs=63.2

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCce-eEecCChhhHHHHHHHHCCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNK---FGFDE-AFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ..+.++++||-.|+ | .|..+..+++. ++ +|++++.+++..+.++++   .+... +++.    ++.+.+   ..++
T Consensus        32 ~~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~~---~~~~  101 (223)
T PRK14967         32 EGLGPGRRVLDLCT-G-SGALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARAV---EFRP  101 (223)
T ss_pred             cccCCCCeEEEecC-C-HHHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhhc---cCCC
Confidence            45788899999997 4 48888888875 66 999999999888766532   23321 2221    332221   2247


Q ss_pred             ccEEEeCCCc----------------------------hhHhhhHhhhhcCCEEEEEe
Q 024337          150 IDVYFENVGG----------------------------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       150 ~d~vid~~g~----------------------------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ||+|+...+.                            ..+..+.+.|+++|+++.+.
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            9999875321                            12456788999999988763

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=96.57  E-value=0.0065  Score=51.02  Aligned_cols=37  Identities=19%  Similarity=0.257  Sum_probs=33.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ++++|||+||+|.+|..+++.+...|.+|++++++++
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            4678999999999999999999999999999987643

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.57  E-value=0.026  Score=49.08  Aligned_cols=44  Identities=23%  Similarity=0.370  Sum_probs=36.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGF  126 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~g~  126 (269)
                      +|.|.||.|.+|.+.+..++..|.+|+++++++++. +.+. ++|.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence            689999779999999999999999999999988775 3444 6665

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.56  E-value=0.014  Score=46.43  Aligned_cols=105  Identities=16%  Similarity=0.247  Sum_probs=66.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHH-HHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLN-AALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~-~~i~~~~  146 (269)
                      ....+.||++|+=.|  .|.|.++..+++..|-  +|+.....+++.+.+++++   |....+..... |.. +...+-.
T Consensus        34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~  110 (247)
T PF08704_consen   34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL  110 (247)
T ss_dssp             HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred             HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence            457899999999877  4678999999998874  9999999999888776543   44322111111 221 1111111


Q ss_pred             CCCccEE-EeCCCc-hhHhhhHhhh-hcCCEEEEEec
Q 024337          147 PEGIDVY-FENVGG-KTLDAVLPNM-KIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~v-id~~g~-~~~~~~~~~l-~~~G~~v~~g~  180 (269)
                      +..+|.| +|--.. ..+..+.+.| +++|+++.+..
T Consensus       111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            2368866 454444 7889999999 89999998854

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.56  E-value=0.02  Score=45.72  Aligned_cols=81  Identities=20%  Similarity=0.250  Sum_probs=52.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcC----Cce---eEecCC-hhhHHHHHHHHC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFG----FDE---AFNYKE-EADLNAALKRYF--  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~g----~~~---~~~~~~-~~~~~~~i~~~~--  146 (269)
                      .++.++|+|+++|+|.+++..+...|++|+++.+..+.  .+.+.+...    ...   ..|..+ ..+....+.+..  
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            57889999999999999999999999998888877553  333331222    111   245553 312222232222  


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      -+++|++++++|.
T Consensus        84 ~g~id~lvnnAg~   96 (251)
T COG1028          84 FGRIDILVNNAGI   96 (251)
T ss_pred             cCCCCEEEECCCC
Confidence            2369999999984

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=96.56  E-value=0.042  Score=44.20  Aligned_cols=96  Identities=11%  Similarity=0.125  Sum_probs=66.6

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ...+.++++||-+|+  |.|..+..+++.. +.+|++++.+++..+.+++.+.....+..    +..+ .  ...+.||+
T Consensus        26 ~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~-~--~~~~~fD~   96 (258)
T PRK01683         26 RVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIAS-W--QPPQALDL   96 (258)
T ss_pred             hCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhc-c--CCCCCccE
Confidence            345678899999996  5678888888776 56999999999988888744432222222    2111 1  11237999


Q ss_pred             EEeCCCc-------hhHhhhHhhhhcCCEEEEE
Q 024337          153 YFENVGG-------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       153 vid~~g~-------~~~~~~~~~l~~~G~~v~~  178 (269)
                      |+....-       ..+..+.+.|+++|.++..
T Consensus        97 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         97 IFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             EEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            9865542       3577888999999998875

>PRK08309 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.22  Score=37.56  Aligned_cols=89  Identities=15%  Similarity=0.125  Sum_probs=55.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---e--eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~--~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      +++|+||+ ++|..+++.+...|++|++.++++++.+.+...++..   .  ..|..+..+....+....  .+++|.+|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            58999997 5666677777778999999999988776655334321   1  236666424444444432  23789999


Q ss_pred             eCCCchhHhhhHhhhhc
Q 024337          155 ENVGGKTLDAVLPNMKI  171 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~  171 (269)
                      +.+=...-+......+.
T Consensus        81 ~~vh~~~~~~~~~~~~~   97 (177)
T PRK08309         81 AWIHSSAKDALSVVCRE   97 (177)
T ss_pred             EeccccchhhHHHHHHH
Confidence            88765433333444443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.54  E-value=0.022  Score=44.11  Aligned_cols=92  Identities=17%  Similarity=0.124  Sum_probs=59.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .+.+|+|.|| |.+|..-++.+...|++|+++++... ....+. +.|--..+. .+. . ...+     .++++||-++
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~~-~-~~dl-----~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RCF-D-ADIL-----EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CCC-C-HHHh-----CCcEEEEECC
Confidence            4679999999 99999999999999999999886533 333333 233111221 111 1 1112     2589999999


Q ss_pred             Cch-hHhhhHhhhhcCCEEEEEec
Q 024337          158 GGK-TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~~-~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.. .-.......+..|..+.+..
T Consensus        78 ~d~~ln~~i~~~a~~~~ilvn~~d  101 (205)
T TIGR01470        78 DDEELNRRVAHAARARGVPVNVVD  101 (205)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEECC
Confidence            874 44455555666777776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.023  Score=45.32  Aligned_cols=41  Identities=17%  Similarity=0.260  Sum_probs=34.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLK  121 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~  121 (269)
                      ++++|+||+|++|...++.+...|++|+++++++ ++.+.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   43 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA   43 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence            4799999999999999999988999999999876 4444443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.51  E-value=0.02  Score=45.90  Aligned_cols=80  Identities=11%  Similarity=0.100  Sum_probs=50.2

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHH----HHHHcCCce---eEecCChhhH
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS-----------KDKVDL----LKNKFGFDE---AFNYKEEADL  138 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s-----------~~~~~~----~~~~~g~~~---~~~~~~~~~~  138 (269)
                      ++++++|+||+  +++|..+++.+...|++|++++++           .++...    ++ +.|...   ..|..+.++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence            57899999997  499999999999999999987532           121111    22 334321   2344443233


Q ss_pred             HHHHHHHCC--CCccEEEeCCCc
Q 024337          139 NAALKRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       139 ~~~i~~~~~--~~~d~vid~~g~  159 (269)
                      .+.+.+...  +.+|++|.++|.
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~  106 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAY  106 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCC
Confidence            333333321  368999999873

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.51  E-value=0.019  Score=42.36  Aligned_cols=82  Identities=20%  Similarity=0.242  Sum_probs=58.6

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCCceeEecCC---hhhHHHHHHHHCC--CCc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGFDEAFNYKE---EADLNAALKRYFP--EGI  150 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~g~~~~~~~~~---~~~~~~~i~~~~~--~~~  150 (269)
                      -.++-.-+|.|+.+++|.+++..+..+|+.|+..+....+- +.++ ++|-..+|...+   +.+....+.....  |..
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            34566789999999999999999999999999998665554 4555 999876664333   2133333333222  378


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |..++|+|-
T Consensus        85 d~~vncagi   93 (260)
T KOG1199|consen   85 DALVNCAGI   93 (260)
T ss_pred             eeeeeccce
Confidence            999999985

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.51  E-value=0.025  Score=47.25  Aligned_cols=93  Identities=12%  Similarity=0.092  Sum_probs=63.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHc----CCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           78 KHGECVFISAASGAVGQLVGQFA-KLLGC-YVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a-~~~G~-~V~~~~~s~~~~~~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ...++++|+|+ |+.|...+..+ ...++ +|.+..+++++.+.+.+++    +.. +..+.   +..+.+.     ..|
T Consensus       125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD  194 (325)
T PRK08618        125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD  194 (325)
T ss_pred             CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence            34678999998 99998777654 45677 8888999988876554343    332 22222   3333343     489


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +|+.|++....... +.++++-++..+|..
T Consensus       195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             EEEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence            99999997443344 888998898888874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.51  E-value=0.086  Score=41.53  Aligned_cols=90  Identities=19%  Similarity=0.241  Sum_probs=58.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCE---EEEEeCC----HHH--------HHHHHHHcCCceeEecCChhhHHHHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCY---VVGSAGS----KDK--------VDLLKNKFGFDEAFNYKEEADLNAAL  142 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~---V~~~~~s----~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~i  142 (269)
                      -++.+++|+|+ |+.|..++..+...|++   +++++++    .++        .++++ .++... .+   . ++.+.+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL   95 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence            45789999999 99999999999889984   8899987    343        22333 333211 11   1 333333


Q ss_pred             HHHCCCCccEEEeCCCchhH-hhhHhhhhcCCEEEEEe
Q 024337          143 KRYFPEGIDVYFENVGGKTL-DAVLPNMKIRGRIAACG  179 (269)
Q Consensus       143 ~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  179 (269)
                      +     ++|++|++++...+ ...++.|.++..+..+.
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            2     38999999974333 35667777766555443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.50  E-value=0.029  Score=47.41  Aligned_cols=77  Identities=19%  Similarity=0.243  Sum_probs=51.1

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCc-eeE--ecCChhhHHHHHHHHCCCCccE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-EAF--NYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~~~--~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ..+.+|||+||+|.+|..+++.+...|.+|+++.++.++.+.+...+  +.. ..+  |..+. +   .+.+... ++|+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~---~~~~~~~-~~d~   82 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE-G---SFDEAVK-GCDG   82 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH-H---HHHHHHc-CCCE
Confidence            45779999999999999999999999999999988776554433232  111 122  22222 1   2222222 4899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      ||.+++.
T Consensus        83 Vih~A~~   89 (353)
T PLN02896         83 VFHVAAS   89 (353)
T ss_pred             EEECCcc
Confidence            9998873

>PRK01581 speE spermidine synthase; Validated

Probab=96.50  E-value=0.072  Score=44.74  Aligned_cols=99  Identities=13%  Similarity=0.066  Sum_probs=63.6

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHc-C--------C-ceeEecCChhhHHHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKF-G--------F-DEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~-g--------~-~~~~~~~~~~~~~~~i~~~  145 (269)
                      ....++|||.|+  |.|..+..++++-+ .+|++++.+++-.+.++ ++ .        . +.-+..... +..+.+.. 
T Consensus       148 h~~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-  222 (374)
T PRK01581        148 VIDPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-  222 (374)
T ss_pred             CCCCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-
Confidence            345679999995  56777788888655 49999999999899888 42 1        1 111111111 33444443 


Q ss_pred             CCCCccEEEeCCCc------------hhHhhhHhhhhcCCEEEEEec
Q 024337          146 FPEGIDVYFENVGG------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       146 ~~~~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .++.||+||--...            +.+..+.+.|+++|.++.-..
T Consensus       223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            33479977644321            246788999999999887543

>PLN00203 glutamyl-tRNA reductase

Probab=96.50  E-value=0.034  Score=49.30  Aligned_cols=73  Identities=26%  Similarity=0.368  Sum_probs=52.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.+.++... +......+..+.+.     .+|+||.|++
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al~-----~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACAA-----EADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHHh-----cCCEEEEccC
Confidence            689999998 9999999999999998 89999999998877764664211 11111102222222     5899999998


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus       339 s  339 (519)
T PLN00203        339 S  339 (519)
T ss_pred             C
Confidence            6

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.47  E-value=0.06  Score=40.06  Aligned_cols=87  Identities=17%  Similarity=0.163  Sum_probs=58.8

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  159 (269)
                      .+|.+.|. |.+|...++-+...|.+|++.++++++.+.+. +.|+. ..+     +..+.+++     .|+|+-|+.. 
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~-~~~-----s~~e~~~~-----~dvvi~~v~~~   68 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAE-VAD-----SPAEAAEQ-----ADVVILCVPDD   68 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEE-EES-----SHHHHHHH-----BSEEEE-SSSH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhh-hhh-----hhhhHhhc-----ccceEeecccc
Confidence            46888998 99999999999999999999999999998888 66643 221     33344443     6899998886 


Q ss_pred             hhHhh------hHhhhhcCCEEEEEec
Q 024337          160 KTLDA------VLPNMKIRGRIAACGM  180 (269)
Q Consensus       160 ~~~~~------~~~~l~~~G~~v~~g~  180 (269)
                      .....      .+..++++..++.++.
T Consensus        69 ~~v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   69 DAVEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhhhhhhhhHHhhccccceEEEecCC
Confidence            33333      3444556667776655

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.47  E-value=0.019  Score=47.74  Aligned_cols=40  Identities=20%  Similarity=0.259  Sum_probs=34.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD  118 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~  118 (269)
                      .+++|+|+||+|.+|..+++.+...|.+|+++.++.++.+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            4789999999999999999999889999998888765433

>PLN02686 cinnamoyl-CoA reductase

Probab=96.46  E-value=0.025  Score=48.15  Aligned_cols=45  Identities=11%  Similarity=0.108  Sum_probs=37.7

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      ...+++|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            355789999999999999999999999999998887766555443

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.46  E-value=0.005  Score=42.01  Aligned_cols=87  Identities=15%  Similarity=0.249  Sum_probs=56.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|||.|+ |.+|..-++.+...|++|+++++..   +..+   +.-..   ... .+.+.    . .++++|+-+++
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~---~~~-~~~~~----l-~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQL---IRR-EFEED----L-DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEE---EES-S-GGG----C-TTESEEEE-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHH---Hhh-hHHHH----H-hhheEEEecCC
Confidence            5789999998 9999999999999999999999775   2222   11111   111 33111    1 26999999998


Q ss_pred             chh-HhhhHhhhhcCCEEEEEecc
Q 024337          159 GKT-LDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       159 ~~~-~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ... -....+..+..|.++.....
T Consensus        70 d~~~n~~i~~~a~~~~i~vn~~D~   93 (103)
T PF13241_consen   70 DPELNEAIYADARARGILVNVVDD   93 (103)
T ss_dssp             -HHHHHHHHHHHHHTTSEEEETT-
T ss_pred             CHHHHHHHHHHHhhCCEEEEECCC
Confidence            744 44555566668988887653

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=96.45  E-value=0.021  Score=44.96  Aligned_cols=74  Identities=18%  Similarity=0.218  Sum_probs=52.4

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      |||+||+|-+|..++..+...|.+|+.+.++.........+.... ...|..+...+.+.+...   ++|.||.+++.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence            799999999999999999999999998888777665544233332 234555441333333332   68999999885

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=96.45  E-value=0.024  Score=45.62  Aligned_cols=95  Identities=20%  Similarity=0.143  Sum_probs=66.7

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ......++++||-.|+  |.|..+..+++.. +.+|++++.++...+.++ +.+.. .+..    +.. .+.  ..+.||
T Consensus        23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~-~~~~----d~~-~~~--~~~~fD   91 (255)
T PRK14103         23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVD-ARTG----DVR-DWK--PKPDTD   91 (255)
T ss_pred             HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCc-EEEc----Chh-hCC--CCCCce
Confidence            3345678899999996  5577888888775 679999999999888887 54443 2221    221 111  123799


Q ss_pred             EEEeCCCc-------hhHhhhHhhhhcCCEEEEE
Q 024337          152 VYFENVGG-------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       152 ~vid~~g~-------~~~~~~~~~l~~~G~~v~~  178 (269)
                      +|+....-       ..+..+.+.|+++|+++..
T Consensus        92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            99876542       3567888999999999865

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.44  E-value=0.023  Score=42.10  Aligned_cols=76  Identities=21%  Similarity=0.191  Sum_probs=53.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce----eEecCChhhHHHHHHHHC-CC-CccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEADLNAALKRYF-PE-GIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~~-~~-~~d~  152 (269)
                      .|..|++.|+.-|+|...++-+...|++|+++.|.++++..+- +.-...    +.|..   ++ +.+.+.. +- .+|-
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV-~e~p~~I~Pi~~Dls---~w-ea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV-KETPSLIIPIVGDLS---AW-EALFKLLVPVFPIDG   80 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH-hhCCcceeeeEeccc---HH-HHHHHhhcccCchhh
Confidence            4788999999999999999999999999999999999988776 333332    22322   22 2233322 22 5677


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      .++.+|-
T Consensus        81 LVNNAgv   87 (245)
T KOG1207|consen   81 LVNNAGV   87 (245)
T ss_pred             hhccchh
Confidence            7777664

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.44  E-value=0.023  Score=41.95  Aligned_cols=88  Identities=10%  Similarity=0.137  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|+|.|| |.+|..-++.+...|++|+++.  ++..+.++ +++.-. ...+   .+.+.    .-.++|+|+-+++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence            5789999999 9999999998888999999885  33344444 443211 1111   12111    0126899999999


Q ss_pred             chhHhhhHhhhhcCCEEEEE
Q 024337          159 GKTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~  178 (269)
                      ....+..+....+.+.++..
T Consensus        80 d~e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         80 QHAVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CHHHHHHHHHHHHHCCcEEE
Confidence            86666555555444444443

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.43  E-value=0.019  Score=44.72  Aligned_cols=99  Identities=18%  Similarity=0.143  Sum_probs=63.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ...+++++++||-.|+  |.|..+..+++.. .+|+.++.+++..+.+++.+   +... ++.... +..+...  ..+.
T Consensus        72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~--~~~~  144 (212)
T PRK00312         72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHG-DGWKGWP--AYAP  144 (212)
T ss_pred             HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCc-eEEEEC-CcccCCC--cCCC
Confidence            3467889999999986  5566666666653 58999999988777766433   3322 111111 1111111  1137


Q ss_pred             ccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          150 IDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       150 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      ||.|+..... .......+.|+++|+++..
T Consensus       145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        145 FDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             cCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence            9988766553 4556778899999998765

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.42  E-value=0.12  Score=39.35  Aligned_cols=98  Identities=17%  Similarity=0.231  Sum_probs=64.1

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ....+.++++||=.|+  |.|..++.+++.. +.+|++++.+++..+.++++   ++... +..... +...    ...+
T Consensus        25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~-i~~~~~-d~~~----~~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGN-IDIIPG-EAPI----ELPG   96 (187)
T ss_pred             HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCC-eEEEec-Cchh----hcCc
Confidence            3445678899999886  5578888888765 46999999999887777632   33322 111111 2111    1124


Q ss_pred             CccEEEeCCC-c---hhHhhhHhhhhcCCEEEEE
Q 024337          149 GIDVYFENVG-G---KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       149 ~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~  178 (269)
                      .||+++.... .   ..+..+.+.|+++|+++..
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            7999986432 1   4567788999999998764

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.37  E-value=0.35  Score=38.72  Aligned_cols=94  Identities=16%  Similarity=0.136  Sum_probs=61.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .+..+||-.|+ | .|..+..+++ .|.+|++++.+++..+.+++.......+..+-. +    + ...++.||+|+...
T Consensus        41 ~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~-~----~-~~~~~~fD~V~s~~  111 (251)
T PRK10258         41 RKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE-S----L-PLATATFDLAWSNL  111 (251)
T ss_pred             cCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc-c----C-cCCCCcEEEEEECc
Confidence            45788999997 3 3666655554 588999999999999888833322222221111 1    0 11123799998755


Q ss_pred             Cc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          158 GG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .-       ..+.++.+.|+++|.++....
T Consensus       112 ~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        112 AVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             hhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            31       457888999999999987644

>PRK08317 hypothetical protein; Provisional

Probab=96.37  E-value=0.033  Score=44.02  Aligned_cols=103  Identities=18%  Similarity=0.285  Sum_probs=67.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc-CCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF-GFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ....+.++++||..|+  |.|..+..+++..+  .++++++.+++..+.+++.. .....+..... +... . ...++.
T Consensus        13 ~~~~~~~~~~vLdiG~--G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~   87 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC--GPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS   87 (241)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence            4567889999999997  44888889998873  59999999999888887331 11111111111 1110 0 112247


Q ss_pred             ccEEEeCCC-----c--hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVG-----G--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+....     .  ..+....++|+++|.++....
T Consensus        88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            998876432     1  467889999999999987653

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.35  E-value=0.077  Score=43.76  Aligned_cols=34  Identities=15%  Similarity=0.175  Sum_probs=30.5

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      .+++++|+|++  +|+|.+.++.+...|++|++.++
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            57899999995  89999999999999999998653

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=96.35  E-value=0.015  Score=48.85  Aligned_cols=35  Identities=20%  Similarity=0.286  Sum_probs=31.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ++|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            47999999999999999999999999999987653

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK07574 formate dehydrogenase; Provisional

Probab=96.35  E-value=0.029  Score=47.78  Aligned_cols=89  Identities=17%  Similarity=0.119  Sum_probs=61.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+++|.|+|. |.+|..+++.++.+|++|++.+++....+..+ .++...   +.   ++.+.++     ..|+|+-+++
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence            4678999998 99999999999999999999998753333333 445321   11   3333333     3788888887


Q ss_pred             c--h---hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G--K---TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~---~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      .  +   .+ ...+..|+++..+|.++.
T Consensus       258 lt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            3  1   12 356777888888877765

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.35  E-value=0.024  Score=44.73  Aligned_cols=76  Identities=20%  Similarity=0.292  Sum_probs=48.5

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHH----HHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccE
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDL----LKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDV  152 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~----~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~  152 (269)
                      ++|+|++|++|..+++.+...|++|++++++. ++.+.    ++ ..+..   ...|..+..++.+.+.+..  -+++|.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELK-AYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999998999999998764 33222    22 33421   2345544312222222221  136899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      ++.+.|.
T Consensus        80 vi~~ag~   86 (239)
T TIGR01830        80 LVNNAGI   86 (239)
T ss_pred             EEECCCC
Confidence            9999884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.34  E-value=0.068  Score=47.72  Aligned_cols=93  Identities=18%  Similarity=0.175  Sum_probs=61.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+++++|.|+ ||+|.+++..+...|++|+++.++.++.+.+.+.++.. .+...   +..    +......|++++|++
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~---~~~----~~~~~~~diiINtT~  448 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLA---DLE----NFHPEEGMILANTTS  448 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHh---Hhh----hhccccCeEEEeccc
Confidence            3678999999 89999999999999999999999988877766466432 22221   111    111124789999887


Q ss_pred             chh------HhhhHhhhhcCCEEEEEec
Q 024337          159 GKT------LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~~~------~~~~~~~l~~~G~~v~~g~  180 (269)
                      -..      .......+++.+.++.+..
T Consensus       449 vGm~~~~~~~pl~~~~l~~~~~v~D~vY  476 (529)
T PLN02520        449 VGMQPNVDETPISKHALKHYSLVFDAVY  476 (529)
T ss_pred             CCCCCCCCCCcccHhhCCCCCEEEEecc
Confidence            321      1122344666666665544

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.33  E-value=0.018  Score=46.97  Aligned_cols=95  Identities=8%  Similarity=0.119  Sum_probs=60.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCC-CC-ccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFP-EG-IDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~-~~-~d~vid~~g  158 (269)
                      +|+|+||||.+|..+++.+...|.+|.+.+|++++..    ..+.. ...|..+...+...++.... .+ +|.++-+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999999989999999999876432    22332 23456554233333332111 25 899988776


Q ss_pred             c-----hhHhhhHhhhhcCC--EEEEEec
Q 024337          159 G-----KTLDAVLPNMKIRG--RIAACGM  180 (269)
Q Consensus       159 ~-----~~~~~~~~~l~~~G--~~v~~g~  180 (269)
                      .     ......++.++..|  ++|.++.
T Consensus        77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            3     12334444444444  7877764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.32  E-value=0.052  Score=44.04  Aligned_cols=94  Identities=17%  Similarity=0.159  Sum_probs=65.7

Q ss_pred             cCCcchhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337           60 LGMPGMTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL  138 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~  138 (269)
                      +||+.......| +..++ -.|++++|.|.+.-+|.-.+.++...|++|+..-..                    .. ++
T Consensus       138 ~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~--------------------t~-~l  195 (285)
T PRK14189        138 RPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK--------------------TR-DL  195 (285)
T ss_pred             cCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC--------------------CC-CH
Confidence            455544444444 33443 368999999998888999999999999999875311                    11 33


Q ss_pred             HHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          139 NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       139 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .+.+++     .|+++-++|...+-. -+.++++..++.+|..
T Consensus       196 ~~~~~~-----ADIVV~avG~~~~i~-~~~ik~gavVIDVGin  232 (285)
T PRK14189        196 AAHTRQ-----ADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN  232 (285)
T ss_pred             HHHhhh-----CCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence            333433     799999999744322 2889999999999874

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=96.32  E-value=0.014  Score=46.17  Aligned_cols=101  Identities=21%  Similarity=0.313  Sum_probs=63.4

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRY  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~  145 (269)
                      +....+++++||-.++  |+|..+..+++..+  .+|++++-|++.++.+++++   +...  .+..+.. ++.     .
T Consensus        41 ~~~~~~~g~~vLDv~~--GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~lp-----~  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVAC--GTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DLP-----F  112 (233)
T ss_dssp             HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B-------S
T ss_pred             hccCCCCCCEEEEeCC--ChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hhc-----C
Confidence            3356788999999885  77889999998875  59999999999888887443   2221  1211111 111     1


Q ss_pred             CCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEecc
Q 024337          146 FPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       146 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .++.||+|..+.|-       ..+.+..+.|+|||+++.+...
T Consensus       113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~  155 (233)
T PF01209_consen  113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFS  155 (233)
T ss_dssp             -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence            12369999987773       3578899999999999988764

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.32  E-value=0.02  Score=44.84  Aligned_cols=98  Identities=13%  Similarity=0.069  Sum_probs=62.3

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee--------------EecCChhhHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA--------------FNYKEEADLNAA  141 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~  141 (269)
                      .+.++.+||+.|+  |.|.-++-+|. +|++|++++.++...+.+.++.+....              ++.... ++.+.
T Consensus        34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL  109 (218)
T ss_pred             CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence            3456789999996  77888888876 699999999999988876434443211              000000 11110


Q ss_pred             HHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEE
Q 024337          142 LKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       142 i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~  178 (269)
                      -.. ..+.||.++|..--         ..+....++|+++|+++.+
T Consensus       110 ~~~-~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        110 TAA-DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             Ccc-cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            000 11368999986631         3467888899999875544

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.31  E-value=0.069  Score=43.72  Aligned_cols=78  Identities=12%  Similarity=0.121  Sum_probs=47.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK---DKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~---~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ++++++|+|+ ||.+.+++..+...|+ +++++.|++   ++.+.+.+.++..  ..+..... +....+.+.. ..+|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEAL-ASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhhc-ccCCE
Confidence            5679999998 8889888777777898 899999984   3555444355421  11111111 1011122111 25899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      |++|+.-
T Consensus       200 vINaTp~  206 (288)
T PRK12749        200 LTNGTKV  206 (288)
T ss_pred             EEECCCC
Confidence            9999973

>PRK14968 putative methyltransferase; Provisional

Probab=96.27  E-value=0.023  Score=43.22  Aligned_cols=44  Identities=27%  Similarity=0.197  Sum_probs=35.3

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK  123 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~  123 (269)
                      ..+++++|..|+  |.|..+..+++. +.++++++.+++..+.++++
T Consensus        21 ~~~~~~vLd~G~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~   64 (188)
T PRK14968         21 DKKGDRVLEVGT--GSGIVAIVAAKN-GKKVVGVDINPYAVECAKCN   64 (188)
T ss_pred             ccCCCEEEEEcc--ccCHHHHHHHhh-cceEEEEECCHHHHHHHHHH
Confidence            467889999986  667788888877 89999999999887777543

>PLN03139 formate dehydrogenase; Provisional

Probab=96.27  E-value=0.032  Score=47.51  Aligned_cols=89  Identities=28%  Similarity=0.248  Sum_probs=61.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|++|.|+|. |.+|...++.++.+|++|++.+++....+... ..|+...    .  ++.+.+.     ..|+|+-+++
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~-----~sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE----E--DLDAMLP-----KCDVVVINTP  264 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec----C--CHHHHHh-----hCCEEEEeCC
Confidence            5789999997 99999999999999999999887654333333 4554211    1  3333333     2788888887


Q ss_pred             c--h---hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G--K---TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~---~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      .  +   .+ ...+..|+++..+|.++.
T Consensus       265 lt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            3  1   12 356777888888877754

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=96.26  E-value=0.024  Score=39.41  Aligned_cols=96  Identities=16%  Similarity=0.137  Sum_probs=60.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      |.+|+-.|+  |.|...+.+++....++++++.++...+.++..+.   ...-++.... ++.+.......+++|+|+-.
T Consensus         1 g~~vlD~~~--G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n   77 (117)
T PF13659_consen    1 GDRVLDPGC--GSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN   77 (117)
T ss_dssp             TEEEEEETS--TTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred             CCEEEEcCc--chHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence            457777775  55666667776655799999999998888774332   2111222222 44444433334589999875


Q ss_pred             CCc---------------hhHhhhHhhhhcCCEEEEE
Q 024337          157 VGG---------------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       157 ~g~---------------~~~~~~~~~l~~~G~~v~~  178 (269)
                      -..               ..+..+.+.|+++|.++.+
T Consensus        78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            542               1267888999999988865

...

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=96.26  E-value=0.0052  Score=40.77  Aligned_cols=82  Identities=22%  Similarity=0.270  Sum_probs=54.2

Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeCCCc-------h
Q 024337           90 GAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFENVGG-------K  160 (269)
Q Consensus        90 g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-------~  160 (269)
                      .|.|..+..+++.-+.+|++++.+++..+.+++......  ....+.. ++     ...++.||+|+....-       .
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~   78 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA   78 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence            357889999998867799999999999999885444321  2222211 11     1112379999875542       3


Q ss_pred             hHhhhHhhhhcCCEEEE
Q 024337          161 TLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~  177 (269)
                      .+.++.+.|+++|+++.
T Consensus        79 ~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   79 ALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHcCcCeEEeC
Confidence            56889999999999873

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK06849 hypothetical protein; Provisional

Probab=96.26  E-value=0.059  Score=46.23  Aligned_cols=95  Identities=13%  Similarity=0.093  Sum_probs=61.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEec--CChhhHHHHHHHHCCC-CccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNY--KEEADLNAALKRYFPE-GIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~--~~~~~~~~~i~~~~~~-~~d~v  153 (269)
                      ...+|||+|+..+.|+..++.++..|.+|++++..+.......  ..++.  .+..  .+...+.+.+.+.... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s--~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS--RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH--HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            4689999999888999999999999999999997755433221  12222  2211  1111566666665544 79999


Q ss_pred             EeCCCch-hHhhhHhhhhcCCEE
Q 024337          154 FENVGGK-TLDAVLPNMKIRGRI  175 (269)
Q Consensus       154 id~~g~~-~~~~~~~~l~~~G~~  175 (269)
                      +-+.... .+....+.+.++.++
T Consensus        81 IP~~e~~~~~a~~~~~l~~~~~v  103 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAYCEV  103 (389)
T ss_pred             EECChHHHhHHhhhhhhcCCcEE
Confidence            9887752 333344556555444

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.25  E-value=0.024  Score=44.82  Aligned_cols=76  Identities=14%  Similarity=0.132  Sum_probs=47.5

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      ++|+|++|++|..+++.+...|++|++++++. ++.+.+.++   .+..   ...|..+..+....+.+..  .++.|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999888653 333332212   2321   1334444312222233221  2368999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      +.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            98887

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.25  E-value=0.094  Score=42.55  Aligned_cols=94  Identities=19%  Similarity=0.135  Sum_probs=65.4

Q ss_pred             cCCcchhHHHHHHHhhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337           60 LGMPGMTAYVGFYEVCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL  138 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~  138 (269)
                      +||+.......| +..++. .|.+|+|.|.+.-+|.-.+.++...|++|++.-...                    . ++
T Consensus       137 ~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t--------------------~-~l  194 (285)
T PRK14191        137 VPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT--------------------K-DL  194 (285)
T ss_pred             CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc--------------------H-HH
Confidence            455555555445 444543 699999999988999999999999999988763211                    1 33


Q ss_pred             HHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          139 NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       139 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .+.+++     .|+++-++|...+-. -+.++++..++.+|..
T Consensus       195 ~~~~~~-----ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~  231 (285)
T PRK14191        195 SFYTQN-----ADIVCVGVGKPDLIK-ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHHh-----CCEEEEecCCCCcCC-HHHcCCCcEEEEeecc
Confidence            333333     799999999744422 4567899999998873

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=96.23  E-value=0.022  Score=41.78  Aligned_cols=96  Identities=24%  Similarity=0.333  Sum_probs=65.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCc--eeEecCChhhHHHHHHHHCCCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFD--EAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~--~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      +++.+||=.|+  |.|..+..+++..  +.++++++.+++..+.+++   +++..  ..+..    ++.+ +.+...+.|
T Consensus         2 ~~~~~iLDlGc--G~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~----d~~~-l~~~~~~~~   74 (152)
T PF13847_consen    2 KSNKKILDLGC--GTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQG----DIED-LPQELEEKF   74 (152)
T ss_dssp             TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEES----BTTC-GCGCSSTTE
T ss_pred             CCCCEEEEecC--cCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEEe----ehhc-cccccCCCe
Confidence            46788998885  7788888888644  6799999999998888874   35554  22222    2222 211111479


Q ss_pred             cEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+|+....-       ..++.+.+.++++|.++....
T Consensus        75 D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~  111 (152)
T PF13847_consen   75 DIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP  111 (152)
T ss_dssp             EEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence            999986431       457888999999999887644

...

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=96.23  E-value=0.029  Score=41.09  Aligned_cols=91  Identities=18%  Similarity=0.143  Sum_probs=56.7

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-------EecCChhhHHHHHHHHCCCCccEEEe
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-------FNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      |+|+|+ |++|...+..++..|.+|..+++++ +.+.++ +.|....       +.........    ....+.+|++|-
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~viv   73 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIK-EQGLTITGPDGDETVQPPIVISAP----SADAGPYDLVIV   73 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHH-HHCEEEEETTEEEEEEEEEEESSH----GHHHSTESEEEE
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhh-heeEEEEecccceecccccccCcc----hhccCCCcEEEE
Confidence            689998 9999999999988999999999887 777766 5554211       1100000001    001137999999


Q ss_pred             CCCchhHhhhHh----hhhcCCEEEEEec
Q 024337          156 NVGGKTLDAVLP----NMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~~~~~~----~l~~~G~~v~~g~  180 (269)
                      |+-......+++    .+.++..++.+.+
T Consensus        74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred             EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence            998644444444    4445556666643

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=96.22  E-value=0.092  Score=45.66  Aligned_cols=100  Identities=15%  Similarity=0.168  Sum_probs=65.0

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHHHHHHHC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~i~~~~  146 (269)
                      ...++++++||=.|+  |.|..+..++..+  +.+|++++.++++.+.+++   .+|...  ++..+.. .+    ....
T Consensus       232 ~l~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~-~l----~~~~  304 (431)
T PRK14903        232 LMELEPGLRVLDTCA--APGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAE-RL----TEYV  304 (431)
T ss_pred             HhCCCCCCEEEEeCC--CccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchh-hh----hhhh
Confidence            456789999998886  4466666777766  4599999999999887764   345542  2222211 12    1112


Q ss_pred             CCCccEEEe---CCCch--------------------------hHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFE---NVGGK--------------------------TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+.||.|+-   |+|..                          .+..+++.++++|+++....
T Consensus       305 ~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC  367 (431)
T PRK14903        305 QDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTC  367 (431)
T ss_pred             hccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence            347998874   44421                          15678889999999876644

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=96.22  E-value=0.009  Score=47.59  Aligned_cols=66  Identities=17%  Similarity=0.127  Sum_probs=47.0

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      |+|.||||-+|...+..++..|-+|++++|++.+.+...   ... +.+       .+.+.+....++|+||+-+|.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---~~~-v~~-------~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---HPN-VTL-------WEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---Ccc-ccc-------cchhhhcccCCCCEEEECCCC
Confidence            689999999999999999999999999999877665432   211 111       111222211269999999996

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.21  E-value=0.043  Score=45.97  Aligned_cols=87  Identities=23%  Similarity=0.256  Sum_probs=60.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|++|.|+|. |.+|...++.++.+|++|++.+++.... ... ..+..    ..   ++.+.+.+     .|+|+-+++
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~~---~l~ell~~-----aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----YR---PLEELLRE-----SDFVSLHVP  213 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----ec---CHHHHHhh-----CCEEEEeCC
Confidence            5789999998 9999999999999999999999775432 222 44432    11   33333433     688888887


Q ss_pred             c-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    .+ ...+..|+++..++.++.
T Consensus       214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             CChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            3 1    12 356777888888877755

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.20  E-value=0.055  Score=44.26  Aligned_cols=92  Identities=15%  Similarity=0.178  Sum_probs=64.0

Q ss_pred             cCCcchhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHcCCceeEecCChhh
Q 024337           60 LGMPGMTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEAD  137 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~~g~~~~~~~~~~~~  137 (269)
                      +||+....+..| +..++ -.|++|+|+|.++.+|.-.+.++...|++|++.. ++.+                      
T Consensus       138 ~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~----------------------  194 (296)
T PRK14188        138 VPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD----------------------  194 (296)
T ss_pred             cCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence            455555555545 33343 4799999999889999999999999999999884 4321                      


Q ss_pred             HHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEecc
Q 024337          138 LNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       138 ~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +.+.++     ..|+++-|+|. ..+...+  ++++..++.+|..
T Consensus       195 l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin  232 (296)
T PRK14188        195 LPAVCR-----RADILVAAVGRPEMVKGDW--IKPGATVIDVGIN  232 (296)
T ss_pred             HHHHHh-----cCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence            111121     27899999997 4444333  8888899998874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=96.18  E-value=0.014  Score=48.46  Aligned_cols=71  Identities=17%  Similarity=0.193  Sum_probs=48.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|+|.|++|.+|..+++.+...|.+|+++++++++...+. ..+... ..|..+. +   .+.+... ++|++|++++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~-~---~l~~~~~-~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDP-A---SLRKAVA-GCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCH-H---HHHHHHh-CCCEEEEece
Confidence            6899999999999999999999999999998766543333 334332 2344432 2   2222222 4899999885

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=96.18  E-value=0.049  Score=41.32  Aligned_cols=93  Identities=17%  Similarity=0.168  Sum_probs=59.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      ++++|+-.|+  |.|..++.+++.. +.+|++++.+++..+.+++   +.+.+. +..... +..+ +.  ..+.||+|+
T Consensus        42 ~~~~vLDiGc--GtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~-i~~i~~-d~~~-~~--~~~~fD~I~  114 (181)
T TIGR00138        42 DGKKVIDIGS--GAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNN-VEIVNG-RAED-FQ--HEEQFDVIT  114 (181)
T ss_pred             CCCeEEEecC--CCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCC-eEEEec-chhh-cc--ccCCccEEE
Confidence            4789999986  5567777777655 4699999999887665542   344432 111111 2221 11  124799888


Q ss_pred             eCCC-c--hhHhhhHhhhhcCCEEEEE
Q 024337          155 ENVG-G--KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       155 d~~g-~--~~~~~~~~~l~~~G~~v~~  178 (269)
                      ...- .  ..++.+.+.|+++|+++..
T Consensus       115 s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       115 SRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             ehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            6542 1  4566778899999999875

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=96.18  E-value=0.054  Score=41.04  Aligned_cols=77  Identities=18%  Similarity=0.205  Sum_probs=44.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--C
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK-------DKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~-------~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      +++|+|+.|++|+..++.+...+. +++.+.++.       +..+.++ +.|..-   ..|..+.+++.+.+.+...  +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            689999999999999999988877 999999882       1334455 555532   2344443233333333322  2


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      +++-||.+.|.
T Consensus        81 ~i~gVih~ag~   91 (181)
T PF08659_consen   81 PIDGVIHAAGV   91 (181)
T ss_dssp             -EEEEEE----
T ss_pred             Ccceeeeeeee
Confidence            67888887774

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02214 cinnamoyl-CoA reductase

Probab=96.16  E-value=0.043  Score=46.17  Aligned_cols=39  Identities=21%  Similarity=0.314  Sum_probs=34.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK  116 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~  116 (269)
                      .++.+|+|+||+|.+|..+++.+...|.+|++++++.++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            357789999999999999999999999999999987654

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=96.15  E-value=0.038  Score=43.63  Aligned_cols=100  Identities=14%  Similarity=0.166  Sum_probs=66.4

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRY  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~  145 (269)
                      ....++++++||-.|+  |.|..+..+++..+  .+|++++.+++..+.+++.+   +.+.  .+..+    ..+ + ..
T Consensus        39 ~~l~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d----~~~-~-~~  110 (231)
T TIGR02752        39 KRMNVQAGTSALDVCC--GTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGN----AME-L-PF  110 (231)
T ss_pred             HhcCCCCCCEEEEeCC--CcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEec----hhc-C-CC
Confidence            3456778999999996  66778888888764  59999999999887776443   2221  22111    111 1 11


Q ss_pred             CCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          146 FPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       146 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..+.||+|+-+..-       ..+..+.+.|+++|+++....
T Consensus       111 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       111 DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             CCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            22479999764331       356778899999999987644

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=96.14  E-value=0.042  Score=46.38  Aligned_cols=50  Identities=20%  Similarity=0.159  Sum_probs=39.7

Q ss_pred             hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      +|||.-|..... .++++|+|+||+|=+|..++..+...|.+|+++++...
T Consensus         1 ~~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~   50 (348)
T PRK15181          1 MTAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST   50 (348)
T ss_pred             Cchhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            367777644333 34578999999999999999999999999999987543

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.13  E-value=0.099  Score=42.63  Aligned_cols=78  Identities=15%  Similarity=0.159  Sum_probs=55.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|++++|.|+++-+|..++.++...|++|++..+..   +                  ++.+.++     .+|++++++
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~~-----~aDIvI~At  210 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELVK-----QADIIVGAV  210 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHhc-----cCCEEEEcc
Confidence            4788999999944599999999999999877766421   1                  2222221     489999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccc
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      |...+ .-.+.++++..++.++...
T Consensus       211 G~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        211 GKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             CCCCc-CCHHHcCCCCEEEEEEEee
Confidence            86332 2235688888888887643

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=96.12  E-value=0.08  Score=46.02  Aligned_cols=102  Identities=17%  Similarity=0.149  Sum_probs=63.8

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHH---cCCce-e--EecCChhhHHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEADLNAALKRY  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~  145 (269)
                      .....+++++||=.|+  |.|..+..+++..+ .+|++++.++++.+.++++   +|... +  .+.+.. .... .  .
T Consensus       232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~-~~~~-~--~  305 (426)
T TIGR00563       232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGR-GPSQ-W--A  305 (426)
T ss_pred             HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccc-cccc-c--c
Confidence            3456788999998886  44555556666554 6999999999988776543   45541 2  221111 1100 0  0


Q ss_pred             CCCCccEEEe---CCCc--------------------------hhHhhhHhhhhcCCEEEEEec
Q 024337          146 FPEGIDVYFE---NVGG--------------------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       146 ~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..+.||.|+-   |+|.                          ..+..+++.|++||+++....
T Consensus       306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc  369 (426)
T TIGR00563       306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC  369 (426)
T ss_pred             cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1236998874   5542                          135678889999999997643

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]

Probab=96.11  E-value=0.19  Score=37.09  Aligned_cols=119  Identities=16%  Similarity=0.045  Sum_probs=85.1

Q ss_pred             hhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           58 GILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        58 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      |.+|....+|-.+. ..-..+.|-.|+=+|.  |+|-.+-.++++.  ...++++..+.+-...+.+.+....++|.+..
T Consensus        28 aI~PsSs~lA~~M~-s~I~pesglpVlElGP--GTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda~  104 (194)
T COG3963          28 AILPSSSILARKMA-SVIDPESGLPVLELGP--GTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDAF  104 (194)
T ss_pred             eecCCcHHHHHHHH-hccCcccCCeeEEEcC--CccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccchh
Confidence            45565556666555 3345678889999996  5677777777654  33888888888877777756666668887765


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       ++...+.+..+..||.||.++.-         ..++..+..++.+|.++.+..
T Consensus       105 -~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY  157 (194)
T COG3963         105 -DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY  157 (194)
T ss_pred             -hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence             55555666554589999999974         246777888899999998865

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.11  E-value=0.018  Score=46.19  Aligned_cols=73  Identities=10%  Similarity=0.104  Sum_probs=50.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCC-CCccEEEeCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP-EGIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-~~~d~vid~~g~  159 (269)
                      +|+|+||||= |...+..+...|.+|+++.+++...+.+. ..|...+.-..-  +-. .+.+... .++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~-~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQ-ELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHH-HHHHHHHhcCCCEEEEcCCH
Confidence            6999999775 99999888888999999999988777776 555444332221  111 1333332 379999998864

This enzyme was found to be a monomer by gel filtration.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.11  E-value=0.085  Score=37.28  Aligned_cols=91  Identities=22%  Similarity=0.173  Sum_probs=50.6

Q ss_pred             EEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHH----HHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           82 CVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKD----KVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~----~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +|+|+|++|-+|.++++.+.. .+.++.....+..    ..+.-. -.|..  .+.-++   ++.+.+.     .+|++|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~-~~~~~~~~~~v~~---~l~~~~~-----~~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE-LAGIGPLGVPVTD---DLEELLE-----EADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH-HCTSST-SSBEBS----HHHHTT-----H-SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh-hhCcCCcccccch---hHHHhcc-----cCCEEE
Confidence            689999999999999999988 5777666553333    001111 11211  111111   3333332     289999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |++-.+.....++.....|.-+.+|.+
T Consensus        73 DfT~p~~~~~~~~~~~~~g~~~ViGTT   99 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKHGVPLVIGTT   99 (124)
T ss_dssp             EES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred             EcCChHHhHHHHHHHHhCCCCEEEECC
Confidence            999666555555555555666666664

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.11  E-value=0.077  Score=41.03  Aligned_cols=34  Identities=21%  Similarity=0.239  Sum_probs=29.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS  113 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s  113 (269)
                      .+.+|+|.|+ |++|..+++.+...|. +++.++.+
T Consensus        20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            4678999998 9999999999999998 88888865

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00417 speE spermidine synthase

Probab=96.09  E-value=0.073  Score=43.19  Aligned_cols=98  Identities=12%  Similarity=0.075  Sum_probs=60.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC------ceeEecCChhhHHHHHHHHCCCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~------~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ...++||+.|+  |.|..+..+++.... ++.+++.+++-.+.+++.+..      +..++.... +..+.+++ .++.|
T Consensus        71 ~~p~~VL~iG~--G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~-~~~~y  146 (270)
T TIGR00417        71 PNPKHVLVIGG--GDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLAD-TENTF  146 (270)
T ss_pred             CCCCEEEEEcC--CchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHh-CCCCc
Confidence            34569999996  446666677776644 899999888877777743321      011111111 33344433 23489


Q ss_pred             cEEEeCCC-----------chhHhhhHhhhhcCCEEEEEe
Q 024337          151 DVYFENVG-----------GKTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       151 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  179 (269)
                      |+|+--..           .+.++.+.+.|+++|.++...
T Consensus       147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            98764322           133568889999999998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK04266 fibrillarin; Provisional

Probab=96.09  E-value=0.066  Score=42.16  Aligned_cols=100  Identities=16%  Similarity=0.096  Sum_probs=62.0

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ...++++++|+=.|+  |.|..+..+++..+ .+|++++.+++..+.+.+...   .-..+..+.. +. ..... ..+.
T Consensus        67 ~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~-~~-~~~~~-l~~~  141 (226)
T PRK04266         67 NFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADAR-KP-ERYAH-VVEK  141 (226)
T ss_pred             hCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCC-Cc-chhhh-cccc
Confidence            367889999999986  44566667777664 499999999987765432211   1122222211 10 00011 1135


Q ss_pred             ccEEEeCCCc-----hhHhhhHhhhhcCCEEEEE
Q 024337          150 IDVYFENVGG-----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       150 ~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  178 (269)
                      ||+++.....     ..+..+.+.|+++|+++..
T Consensus       142 ~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        142 VDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             CCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            9999854432     1367888999999999984

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=96.08  E-value=0.032  Score=48.99  Aligned_cols=171  Identities=13%  Similarity=0.122  Sum_probs=90.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----HcCCce----eEecCChhhHHHHHHHHCCC-
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKN----KFGFDE----AFNYKEEADLNAALKRYFPE-  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~----~~g~~~----~~~~~~~~~~~~~i~~~~~~-  148 (269)
                      .|++|||+||+|++|...+.-....+. +++..++++.+......    .++...    +-|..+    .+.+.+...+ 
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD----~~~~~~~~~~~  324 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD----RDRVERAMEGH  324 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc----HHHHHHHHhcC
Confidence            589999999999999877766666677 88889988876654433    333221    223333    2344444445 


Q ss_pred             CccEEEeCCCchhH------------------hhhHhh-hhcC-CEEEEEeccccc-cCCCCCCccchHHH----hhc--
Q 024337          149 GIDVYFENVGGKTL------------------DAVLPN-MKIR-GRIAACGMISQY-NLDKPEGVHNLMYL----VSK--  201 (269)
Q Consensus       149 ~~d~vid~~g~~~~------------------~~~~~~-l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~----~~~--  201 (269)
                      ++|+||.++.-++.                  ....+. +..+ -++|.++..-.. +++-......+.+.    ...  
T Consensus       325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~~  404 (588)
T COG1086         325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRNV  404 (588)
T ss_pred             CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHHHHHHHHHHhhcc
Confidence            89999998864221                  122222 2222 367776542110 11111111111111    111  


Q ss_pred             ---ceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeeh--ccccccHHHHHHHH
Q 024337          202 ---RLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM--AEGLESAPAALIGL  253 (269)
Q Consensus       202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~a~~~~  253 (269)
                         .-.+...+.+++.......++..-+++++|.--+..+.  +--|=.++||.+..
T Consensus       405 ~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LV  461 (588)
T COG1086         405 SGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLV  461 (588)
T ss_pred             CCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHH
Confidence               23455555566555555667777788888844332221  11244556665533

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=96.06  E-value=0.048  Score=43.61  Aligned_cols=97  Identities=12%  Similarity=0.166  Sum_probs=64.1

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCCc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKL---LGCYVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~---~G~~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      +.++.+||-+|+  |.|..+..+++.   -++++++++.|++..+.+++.+.   ...-++.... ++    .+...+.+
T Consensus        54 ~~~~~~vLDlGc--GtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~-d~----~~~~~~~~  126 (247)
T PRK15451         54 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DI----RDIAIENA  126 (247)
T ss_pred             CCCCCEEEEEcc--cCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeC-Ch----hhCCCCCC
Confidence            568899999997  457777777764   36799999999998888875442   2211222221 22    11222357


Q ss_pred             cEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+++.+..-         ..++.+.+.|+++|.++....
T Consensus       127 D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~  165 (247)
T PRK15451        127 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  165 (247)
T ss_pred             CEEehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            887754321         357889999999999998764

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.06  E-value=0.027  Score=46.70  Aligned_cols=87  Identities=17%  Similarity=0.123  Sum_probs=60.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|+|- |.+|..+++.++.+|++|++.+++.++..      +.....  ... ++.+.+.     ..|+|+.+.+
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP  199 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence            5789999998 99999999999999999999987643221      111111  111 3444443     3799998887


Q ss_pred             c--h---h-HhhhHhhhhcCCEEEEEec
Q 024337          159 G--K---T-LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~---~-~~~~~~~l~~~G~~v~~g~  180 (269)
                      .  .   . -...+..|+++..+|.++.
T Consensus       200 lt~~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence            4  2   1 2356778888888888765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	269
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		1e-124
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-114
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		5e-57
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		9e-53
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		7e-50
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		7e-50
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		2e-37
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		2e-37
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		7e-37
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		3e-34
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		3e-21
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		3e-21
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		3e-21
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		2e-10
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		7e-10
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-08
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		4e-07
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		9e-07
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-06
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		2e-06
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		6e-06
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		7e-06
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-05
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		2e-05
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		8e-05
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		1e-04
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		2e-04
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		2e-04
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		3e-04
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		3e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/268 (78%), Positives = 240/268 (89%), Gaps = 1/268 (0%)
Query: 3   PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYLFKIQHTDVPLSYYTGILG 61
           PI+GYGVAKVL+S +P+F KGDLVWGMTGWEEYS+IT    LFKI   DVPLSYYTGILG
Sbjct: 76  PITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILG 135
Query: 62  MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
           MPGMTAY GF+EVCS K GE VF+SAASGAVGQLVGQFAK+LGCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLK 195
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
           +KFGFDEAFNYKEE DL+AALKRYFP+GID+YFENVGGK LDAVL NMK+ GRIA CGMI
Sbjct: 196 SKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMI 255
Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE 241
           SQYNL++ EGVHNL  L++KR+RMEGF+V D+YHLYPK+LEM+IP IK GK+VYVED+A 
Sbjct: 256 SQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAH 315
Query: 242 GLESAPAALIGLFSGQNVGKQVVAVAPE 269
           GLESAP AL+GLFSG+N+GKQVV V+ E
Sbjct: 316 GLESAPTALVGLFSGRNIGKQVVMVSRE 343

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  406 bits (1044), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/270 (71%), Positives = 227/270 (84%), Gaps = 2/270 (0%)
Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT--APYLFKIQHTDVPLSYYTGI 59
           QPI GYGV+++++S +P++ KGDL+WG+  WEEYS+IT      FKIQHTDVPLSYYTG+
Sbjct: 76  QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135
Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195
Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           LK KFGFD+AFNYKEE+DL AALKR FP GID+YFENVGGK LDAVL NM + GRIA CG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255
Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
           MISQYNL+  EGVHNL  ++ KR R++GF+V D Y  Y KFLE ++PHI+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315
Query: 240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           A+GLE AP AL+GLF G+NVGKQVV VA E
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  217 bits (553), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 120/260 (46%), Positives = 158/260 (60%), Gaps = 2/260 (0%)
Query: 8   GVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTA 67
           GV KVL S++P F  GD V G  G ++Y +      +K+  +  PL  Y   LGM GMTA
Sbjct: 78  GVGKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTA 137
Query: 68  YVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD 127
           Y    +V   K+GE V IS A+GAVG + GQ A+L GC VVG AG  +K   L  + GFD
Sbjct: 138 YFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD 197
Query: 128 EAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLD 187
            A +YK E DL A LKR  P+GIDV+F+NVGG+ LD VL  +  + RI  CG ISQYN  
Sbjct: 198 GAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNK 256
Query: 188 KP-EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESA 246
           +   G  N + L+  R RMEG +V+D+   +P+ L+ +   + EGKL   ED+ EGLE+ 
Sbjct: 257 EAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETF 316
Query: 247 PAALIGLFSGQNVGKQVVAV 266
           P  L+ LFSG+N GK V+ V
Sbjct: 317 PETLLKLFSGENFGKLVLKV 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  203 bits (516), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/265 (44%), Positives = 162/265 (61%), Gaps = 6/265 (2%)
Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGM 62
           G  VA+V++S+N  F  G +V   +GW  + +     L K+       +PLS   G +GM
Sbjct: 69  GQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGM 128
Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  EVC  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +K+  LK 
Sbjct: 129 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK- 187
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           + GFD AFNYK    L  ALK+  P+G D YF+NVGG+ L+ VL  MK  G+IA CG IS
Sbjct: 188 QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAIS 247
Query: 183 QYN-LDKPEGVHNLMYLVSKRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
            YN +D+     +   ++ K+LR+EGFIV      +  K L  ++  + EGK+ Y E + 
Sbjct: 248 VYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVT 307
Query: 241 EGLESAPAALIGLFSGQNVGKQVVA 265
           +G E+ PAA I + +G N+GK VV 
Sbjct: 308 KGFENMPAAFIEMLNGANLGKAVVT 332

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  193 bits (491), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/264 (43%), Positives = 153/264 (57%), Gaps = 6/264 (2%)
Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQH---TDVPLSYYTGILGM 62
           G  VAKV++S+N    KG +V    GW  +S+     L K+       +PLS   G +GM
Sbjct: 64  GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGM 123
Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  E+C  K GE V ++AA+GAVG +VGQ AKL GC VVG+ GS +KV  L+ 
Sbjct: 124 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ- 182
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           K GFD  FNYK    L   LK+  P+G D YF+NVGG+  + V+  MK  GRIA CG IS
Sbjct: 183 KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 242
Query: 183 QYNLDKPEGVHNLMYLVS-KRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
            YN   P        +V  + LRME F+V         K L+ ++  + EGK+ Y E + 
Sbjct: 243 TYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYII 302
Query: 241 EGLESAPAALIGLFSGQNVGKQVV 264
           EG E+ PAA +G+  G N+GK +V
Sbjct: 303 EGFENMPAAFMGMLKGDNLGKTIV 326

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  193 bits (491), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/264 (43%), Positives = 153/264 (57%), Gaps = 6/264 (2%)
Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQH---TDVPLSYYTGILGM 62
           G  VAKV++S+N    KG +V    GW  +S+     L K+       +PLS   G +GM
Sbjct: 85  GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGM 144
Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
           PG+TAY G  E+C  K GE V ++AA+GAVG +VGQ AKL GC VVG+ GS +KV  L+ 
Sbjct: 145 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ- 203
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           K GFD  FNYK    L   LK+  P+G D YF+NVGG+  + V+  MK  GRIA CG IS
Sbjct: 204 KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 263
Query: 183 QYNLDKPEGVHNLMYLVS-KRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
            YN   P        +V  + LRME F+V         K L+ ++  + EGK+ Y E + 
Sbjct: 264 TYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYII 323
Query: 241 EGLESAPAALIGLFSGQNVGKQVV 264
           EG E+ PAA +G+  G N+GK +V
Sbjct: 324 EGFENMPAAFMGMLKGDNLGKTIV 347

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 147/283 (51%), Gaps = 21/283 (7%)
Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGM-TGWEEYSLITAPYLFKI--QHTDVPLSYYTG 58
           Q + G G+  + +S++   +KGD V      W+   ++    L K+  Q  D  LSY+ G
Sbjct: 78  QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 137
Query: 59  ILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
            +GMPG+T+ +G  E    +A   + + +S A+GA G + GQ    LGC  VVG  G+ +
Sbjct: 138 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 197
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           K  LL ++ GFD A NYK++ ++   L+   P G+DVYF+NVGG   D V+  M     I
Sbjct: 198 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 256
Query: 176 AACGMISQYNLDKP---------EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIP 226
             CG ISQYN D P         E +        + +  E F+VL++   +   +  +  
Sbjct: 257 ILCGQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQ 311
Query: 227 HIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             KEGKL   E +  GLE+  AA   + +G N+GKQ+V ++ E
Sbjct: 312 WFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 147/283 (51%), Gaps = 21/283 (7%)
Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGM-TGWEEYSLITAPYLFKI--QHTDVPLSYYTG 58
           Q + G G+  + +S++   +KGD V      W+   ++    L K+  Q  D  LSY+ G
Sbjct: 73  QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 132
Query: 59  ILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
            +GMPG+T+ +G  E    +A   + + +S A+GA G + GQ    LGC  VVG  G+ +
Sbjct: 133 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 192
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           K  LL ++ GFD A NYK++ ++   L+   P G+DVYF+NVGG   D V+  M     I
Sbjct: 193 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 251
Query: 176 AACGMISQYNLDKP---------EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIP 226
             CG ISQYN D P         E +        + +  E F+VL++   +   +  +  
Sbjct: 252 ILCGQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQ 306
Query: 227 HIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             KEGKL   E +  GLE+  AA   + +G N+GKQ+V ++ E
Sbjct: 307 WFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  150 bits (379), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 17/281 (6%)
Query: 2   QPISGYGVAKVLDSENPEFSKGDLV----WGMTGWEEYSLITAPYLFKI--QHTDVPLSY 55
           Q   G G+  V +S++ + +KGD V    W    W+  +++    L K+  Q  D  LSY
Sbjct: 74  QVADGGGIGVVEESKHQKLTKGDFVTSFYWP---WQTKAILDGNGLEKVDPQLVDGHLSY 130
Query: 56  YTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG 112
           + G +GMPG+T+ +G  E    SA   + + +S A+GA G L GQ   LLGC  VVG  G
Sbjct: 131 FLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG 190
Query: 113 SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIR 172
           +++K   L ++ GFD A NYK   ++   L+   P G+DVYF+NVGG   +AV+  M   
Sbjct: 191 TQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNEN 249
Query: 173 GRIAACGMISQYNLDKPEGVHNLMYLVSKR----LRMEGFIVLDHYHLYPKFLEMIIPHI 228
             I  CG ISQY+ D P        + + R    +  E F VL++   +   +  +    
Sbjct: 250 SHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWF 309
Query: 229 KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           KEGKL   E MA+GLE+   A   + +G NVGKQ+V ++ +
Sbjct: 310 KEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCISED 350

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  142 bits (357), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 143/278 (51%), Gaps = 11/278 (3%)
Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKI--QHTDVPLSYYTG 58
           Q   G G+  V +S++ + +KGD V      W+  +++    L K+  Q  D  LSY+ G
Sbjct: 84  QVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLG 143
Query: 59  ILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
            +G PG+T+ +G  E    SA   +   +S A+GA G L GQ   LLGC  VVG  G+++
Sbjct: 144 AIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE 203
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           K   L ++ GFD A NYK   ++   L+   P G+DVYF+NVGG   + V+        I
Sbjct: 204 KCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNTVISQXNENSHI 262
Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKR----LRMEGFIVLDHYHLYPKFLEMIIPHIKEG 231
             CG ISQYN D P        + + R    +  E F VL++   +   +  +    KEG
Sbjct: 263 ILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEG 322
Query: 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           KL   E +A+GLE+   A     +G NVGKQ+V ++ +
Sbjct: 323 KLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 47  QHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVG 97
           ++T VP S  T +         L + G TAY+   E+     G+ V ++AA+G  GQ   
Sbjct: 122 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAM 181
Query: 98  QFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157
           Q +K   C+V+G+  S +K   LK+  G D   NYK E  +   LK+ +PEG+DV +E+V
Sbjct: 182 QLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESV 239
Query: 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------MYLVSKRLRMEGFIVL 211
           GG   D  +  +  +GR+   G IS Y    P G+  +        L+ K   ++GF  L
Sbjct: 240 GGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFF-L 296
Query: 212 DHY-HLYPKFLEMIIPHIKEGKLVYVEDMAE--------GLESAPAALIGLFSGQNVGKQ 262
           +HY   Y   +  ++     G LV   D+ +        GLES   A+  ++ G+N GK 
Sbjct: 297 NHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKI 356
Query: 263 VV 264
           VV
Sbjct: 357 VV 358

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 47  QHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVG 97
           ++T VP S  T +         L + G TAY+   E+     G+ V ++AA+G  GQ   
Sbjct: 130 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAM 189
Query: 98  QFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157
           Q +K   C+V+G+  S +K   LK+  G D   NYK E  +   LK+ +PEG+DV +E+V
Sbjct: 190 QLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESV 247
Query: 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------MYLVSKRLRMEGFIVL 211
           GG   D  +  +  +GR+   G IS Y    P G+  +        L+ K   ++GF  L
Sbjct: 248 GGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFF-L 304
Query: 212 DHY-HLYPKFLEMIIPHIKEGKLVYVEDMAE--------GLESAPAALIGLFSGQNVGKQ 262
           +HY   Y   +  ++     G LV   D+ +        GLES   A+  ++ G+N GK 
Sbjct: 305 NHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKI 364
Query: 263 VV 264
           VV
Sbjct: 365 VV 366

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 47  QHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVG 97
           ++T VP S  T +         L + G TAY+   E+     G+ V ++AA+G  GQ   
Sbjct: 101 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAM 160
Query: 98  QFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157
           Q +K   C+V+G+  S +K   LK+  G D   NYK E  +   LK+ +PEG+DV +E+V
Sbjct: 161 QLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESV 218
Query: 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------MYLVSKRLRMEGFIVL 211
           GG   D  +  +  +GR+   G IS Y    P G+  +        L+ K   ++GF  L
Sbjct: 219 GGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFF-L 275
Query: 212 DHY-HLYPKFLEMIIPHIKEGKLVYVEDMAE--------GLESAPAALIGLFSGQNVGKQ 262
           +HY   Y   +  ++     G LV   D+ +        GLES   A+  ++ G+N GK 
Sbjct: 276 NHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKI 335
Query: 263 VV 264
           VV
Sbjct: 336 VV 337

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 8   GVAKVLDSENPEFSKGDLVWGMT----GWEEYSLITAPYLFKIQHTDVPLSYYTGI-LGM 62
           GV + +      F KGD V+  +    G+ EY+L     ++K+      L +  G  +G+
Sbjct: 97  GVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK---LDFKQGAAIGI 153
Query: 63  PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL-LK 121
           P  TAY         K GE V +  ASG VG    Q A+  G  ++G+AG+++   + L+
Sbjct: 154 PYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           N  G  E FN++E   ++  +K+Y  E GID+  E +    L   L  +   GR+   G
Sbjct: 214 N--GAHEVFNHREVNYID-KIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 4   ISGYGVAKVLDSENP---EFSKGDLVWG----MTGWEEYSLITAPYLFKI-QHTDVPLSY 55
           + G+  A V++   P   +F+ G+ V      +  + +  L  A  L K+ +  D+   +
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVH 122
Query: 56  YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
             G++ + GMTA    ++    K G+ V I AA+G +G ++  +A+ LG  V+G+  +++
Sbjct: 123 LAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE 181
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           K +  + K G     NY  +       +    +G+DV ++++G  TL   L  ++ RG  
Sbjct: 182 KAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMC 240
Query: 176 AACGMIS 182
           AA G  S
Sbjct: 241 AAYGHAS 247

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA+    +    + G+ V + AA   V     Q AKL G  V+ +AGS+DK+   K   
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 125 GFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
           G DE  NY    D    ++R    +G D   ++ G    + V+      GRIA  G  S 
Sbjct: 211 GADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSG 269
Query: 184 YNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGL 243
           Y     EG     ++  ++L + G  +     L+P     I+  ++EGKL  V      L
Sbjct: 270 Y-----EGTLPFAHVFYRQLSILGSTMASKSRLFP-----ILRFVEEGKLKPVVGQVLPL 319
Query: 244 ESA 246
           E+A
Sbjct: 320 EAA 322

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 55  YYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 114
           Y  G+L +  +TA     E    K G+ V + AA+G VG ++ Q  K+ G + +  A + 
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 115 DKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGR 174
           +K+ + K ++G +   N  +E  L   LK    +G+D  F++VG  T +  L  +K +G 
Sbjct: 184 EKLKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGV 242
Query: 175 IAACGMIS 182
             + G  S
Sbjct: 243 FVSFGNAS 250

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA+   + V + + G+ V I A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
           G    FNYK+E    A LK     G+++  + +GG   +  +  + + GR    G++   
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 185 NLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH---------LYPKFLEMIIPH 227
           +++ P        L SK L   G ++              L   F E I+PH
Sbjct: 267 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 310

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA+   + V + + G+ V I A    VG    Q  ++ G   + +AGS+ K+ + + K 
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
           G    FNYK+E    A LK     G+++  + +GG   +  +  + + GR    G++   
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 185 NLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH---------LYPKFLEMIIPH 227
           +++ P        L SK L   G ++              L   F E I+PH
Sbjct: 251 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 294

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTG----WEEYSLITAPYLFKIQHTDVPLSY-YTGIL 60
           G GV + +  E   F  GD V   TG    + E  ++    L K+  +   +S+     L
Sbjct: 65  GAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADS---VSFEQAAAL 121
Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
            + G+T      +    K GE +   AA+G VG L  Q+AK LG  ++G+  S +K    
Sbjct: 122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA 181
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT----LDAVLPNMKIRGRIA 176
           K   G  E  +Y  E      L+    +   V ++ VG  T    LD+V P   +     
Sbjct: 182 K-ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240
Query: 177 ACGMISQYNL 186
           A G +S  NL
Sbjct: 241 ASGPVSGVNL 250

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 79/207 (38%), Gaps = 22/207 (10%)
Query: 12  VLDSENPEFSKGDLVWGMTGW----------EEYSLITAPYLFKI-QHTDVPLSYYTGIL 60
           V  SE+P F  G  V  +TGW           E + +   +L  + Q  D   +   G  
Sbjct: 90  VRTSEDPRFHAGQEVL-LTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTA 148
Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           G   M   +   +         + ++ ASG VG         LG  VV  +G +   + L
Sbjct: 149 GFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 208
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
           K+  G        E A+     K+ +   ID     VG K L  VL  M   G +AACG+
Sbjct: 209 KS-LGASRVLPRDEFAESRPLEKQVWAGAID----TVGDKVLAKVLAQMNYGGCVAACGL 263
Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEG 207
              + L        +M  + + +R++G
Sbjct: 264 AGGFTLPT-----TVMPFILRNVRLQG 285

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 100/262 (38%), Gaps = 30/262 (11%)
Query: 20  FSKGDLVWGMT---GWEEYSLITAPYLF-------KIQHTDVPLSYYTGILGMPGMTAYV 69
           ++ GD V G+     + EY L+ A  +         ++   +P +++T          + 
Sbjct: 107 YAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VWA 157
Query: 70  GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA 129
             ++      GE V I   +  +G    Q A+  G  V  +AGS  K +  + + G    
Sbjct: 158 NLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRG 216
Query: 130 FNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKP 189
            NY+ E D  A +K    +G+D+  + +G    +  + ++   G ++    +     +K 
Sbjct: 217 INYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEK- 274
Query: 190 EGVHNLMYLVSKRLRMEGFIVL-----DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLE 244
               NL  +  KRL + G         +   +    L  + P ++ G +  V       E
Sbjct: 275 ---VNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFE 331
Query: 245 SAPAALIGLFSGQNVGKQVVAV 266
               A   L  G +VGK  + V
Sbjct: 332 DVADAHRLLEEGSHVGKVXLTV 353

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 8   GVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPG 64
           G+ + L      +  GD V        W E       +++KI   D+  S       M  
Sbjct: 70  GIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPD-DMSFSEAAA-FPMNF 127
Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TAYV  +EV + + G  V + +A G VGQ V Q    +    V    S  K + +K+  
Sbjct: 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSV 187
Query: 125 G--FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159
              FD   +Y +E      +KR   EG+D+  + + G
Sbjct: 188 THLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 62  MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
           + G+T Y    +    K  E     AA+G VG +  Q+AK LG  ++G+ G+  K     
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL 182
Query: 122 NKFGFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
            K G  +  NY+EE DL   LK     + + V +++VG  T +  L  ++ RG + + G 
Sbjct: 183 -KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGN 240
Query: 181 IS 182
            S
Sbjct: 241 SS 242

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK---VDLLK 121
           +TAY    ++   + GE + + +A+G VG    Q A+ LG  V  +A S+DK   V+L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAVELSR 389
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
                    +++++  L A   R    G+DV   ++ G+  DA L  +   GR    G  
Sbjct: 390 EHLASSRTCDFEQQF-LGATGGR----GVDVVLNSLAGEFADASLRMLPRGGRFLELG-- 442
Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFL-EMI--IPHIKEGKLVY-VE 237
            + ++  P  V +    VS       +   D     P+ + EM+  +  + EG+++  + 
Sbjct: 443 -KTDVRDPVEVADAHPGVS-------YQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLP 494
Query: 238 DMAEGLESAPAALIGLFSGQNVGKQVVAVAP 268
             A  +  AP AL  L   ++VGK V+ + P
Sbjct: 495 VTAWDVRQAPEALRHLSQARHVGKLVLTMPP 525

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 61  GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           G+  +TA+    EV     GE V I +A+G VG      AK++G  +  +AGS  K ++L
Sbjct: 20  GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
            ++ G +   + +     +  L+     G+DV   ++ G+ +   +  +   GR    G 
Sbjct: 80  -SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGK 138
Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD---HYHLYP----KFLEMIIPHIKEGKL 233
              Y  D   G+  L        +   F V+D   +  L P    + L+ I+ H+ +GKL
Sbjct: 139 KDVYA-DASLGLAALA-------KSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 190

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 28  GMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISA 87
           G+  W   ++ +   L ++  +D+PL      LG+   TAY    +    + G+ V  +A
Sbjct: 105 GLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 162
Query: 88  ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA-LKRYF 146
           ++  VGQ V Q A  LG   +     +  +  L ++     A +   E +L    +K +F
Sbjct: 163 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 222
Query: 147 PE--GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204
            +     +    VGGK+   +L  +   G      M++   + K   V ++  L+ K L+
Sbjct: 223 KDMPQPRLALNCVGGKSSTELLRQLARGGT-----MVTYGGMAKQPVVASVSLLIFKDLK 277
Query: 205 MEGFIV--LDHYHLYPKFLEMIIP---HIKEGKL-------VYVEDMAEGLESA 246
           + GF +      H   +F E+I+     I+ G+L       V ++D    LE++
Sbjct: 278 LRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS 331

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 28  GMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISA 87
           G+  W   ++ +   L ++  +D+PL      LG+   TAY    +    + G+ V  +A
Sbjct: 118 GLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 175
Query: 88  ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA-LKRYF 146
           ++  VGQ V Q A  LG   +     +  +  L ++     A +   E +L    +K +F
Sbjct: 176 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 235
Query: 147 PE--GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204
            +     +    VGGK+   +L  +   G      M++   + K   V ++  L+ K L+
Sbjct: 236 KDMPQPRLALNCVGGKSSTELLRQLARGGT-----MVTYGGMAKQPVVASVSLLIFKDLK 290
Query: 205 MEGFIV--LDHYHLYPKFLEMIIP---HIKEGKL-------VYVEDMAEGLESA 246
           + GF +      H   +F E+I+     I+ G+L       V ++D    LE++
Sbjct: 291 LRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS 344

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 14/212 (6%)
Query: 66   TAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF- 124
            TAY         + GE V I + SG VGQ     A   GC V  + GS +K   L+ +F 
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 125  GFDEA--FNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
              DE    N ++ +     L+    +G+D+   ++  + L A +  +   GR    G   
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG--- 1770
Query: 183  QYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH-----LYPKFLEMIIPHIKEGKLVYVE 237
            +++L     +   ++L  K +   G I+LD         + +  E++   I+EG +  ++
Sbjct: 1771 KFDLSNNHALGMAVFL--KNVTFHG-ILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827
Query: 238  DMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
                      AA   +  G+++GK V+ V  E
Sbjct: 1828 CTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
           G+TA+    E    + G+ V +   +G V     Q AK  G  V+ ++ S++K+D     
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
            G D   N  EE  +          G D   E  GG  L   L  +   GRI+  G++  
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 184 YNLDKPEG 191
           + +  P G
Sbjct: 292 FEVSGPVG 299

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	269
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	1e-169
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-153
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-146
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-92
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	6e-27
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-25
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	2e-25
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-25
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	6e-25
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	9e-25
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	9e-24
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-23
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-23
3gms_A	340	Putative NADPH:quinone reductase; structural genom	5e-23
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	6e-23
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-22
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	2e-22
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-22
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-22
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-22
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	5e-22
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	3e-21
4eye_A	342	Probable oxidoreductase; structural genomics, niai	3e-21
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-20
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-20
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-16
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-16
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	3e-16
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	6e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	7e-16
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-15
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	3e-14
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-13
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-12
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	9e-10
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	3e-09
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-09
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-07
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-07
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-06
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-06
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	7e-06
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-05
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-04

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  470 bits (1213), Expect = e-169
 Identities = 192/270 (71%), Positives = 227/270 (84%), Gaps = 2/270 (0%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP--YLFKIQHTDVPLSYYTGI 59
           QPI GYGV+++++S +P++ KGDL+WG+  WEEYS+IT      FKIQHTDVPLSYYTG+
Sbjct: 76  QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           LK KFGFD+AFNYKEE+DL AALKR FP GID+YFENVGGK LDAVL NM + GRIA CG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
           MISQYNL+  EGVHNL  ++ KR R++GF+V D Y  Y KFLE ++PHI+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315

Query: 240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           A+GLE AP AL+GLF G+NVGKQVV VA E
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  430 bits (1108), Expect = e-153
 Identities = 119/268 (44%), Positives = 162/268 (60%), Gaps = 6/268 (2%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKI---QHTDVPLSYYTG 58
             + G  VA+V++S+N  F  G +V   +GW  + +     L K+       +PLS   G
Sbjct: 65  AVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALG 124

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
            +GMPG+TAY G  EVC  K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +K+ 
Sbjct: 125 TIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA 184

Query: 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
            LK + GFD AFNYK    L  ALK+  P+G D YF+NVGG+ L+ VL  MK  G+IA C
Sbjct: 185 YLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAIC 243

Query: 179 GMISQYNL-DKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEGKLVYV 236
           G IS YN  D+     +   ++ K+LR+EGFIV      +  K L  ++  + EGK+ Y 
Sbjct: 244 GAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYH 303

Query: 237 EDMAEGLESAPAALIGLFSGQNVGKQVV 264
           E + +G E+ PAA I + +G N+GK VV
Sbjct: 304 EHVTKGFENMPAAFIEMLNGANLGKAVV 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  412 bits (1061), Expect = e-146
 Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 11/278 (3%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMT-GWEEYSLITAPYLFKI--QHTDVPLSYYTG 58
           Q + G G+  + +S++   +KGD V      W+   ++    L K+  Q  D  LSY+ G
Sbjct: 78  QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 137

Query: 59  ILGMPGMTAYVGFYEVCSAKHG--ECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKD 115
            +GMPG+T+ +G  E      G  + + +S A+GA G + GQ    LGC  VVG  G+ +
Sbjct: 138 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 197

Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           K  LL ++ GFD A NYK++ ++   L+   P G+DVYF+NVGG   D V+  M     I
Sbjct: 198 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 256

Query: 176 AACGMISQYNLDKPEGV----HNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG 231
             CG ISQYN D P               + +  E F+VL++   +   +  +    KEG
Sbjct: 257 ILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEG 316

Query: 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           KL   E +  GLE+  AA   + +G N+GKQ+V ++ E
Sbjct: 317 KLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  274 bits (703), Expect = 8e-92
 Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)

Query: 8   GVAKVLDSENPEFSKGDLVWGMT--GWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGM 65
            V  +  S +  ++ G  V  M    + EY+++ A     +         Y   L + G 
Sbjct: 94  EVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPV---PSVKPEYLT-LLVSGT 149

Query: 66  TAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125
           TAY+   E+     G+ V ++AA+G  GQ   Q +K   C+V+G+  S +K   LK   G
Sbjct: 150 TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLG 208

Query: 126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYN 185
            D   NYK E  +   LK+ +PEG+DV +E+VGG   D  +  +  +GR+   G IS Y 
Sbjct: 209 CDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 267

Query: 186 ----LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA- 240
               L   +       L+ K   ++GF +  +   Y   +  ++     G LV   D+  
Sbjct: 268 TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGD 327

Query: 241 -------EGLESAPAALIGLFSGQNVGKQVVAVA 267
                   GLES   A+  ++ G+N GK VV + 
Sbjct: 328 LSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  106 bits (266), Expect = 6e-27
 Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 11/207 (5%)

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
            T +   +++     GE V I   +  +G    Q A+  G  V  +AGS  K +  + + 
Sbjct: 153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL 211

Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
           G     NY+ E D  A +K    +G+D+  + +G    +  + ++   G ++    +   
Sbjct: 212 GAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGGA 270

Query: 185 NLDKPEGVHNLMYLVSKRLRMEGFI-----VLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
                E V NL  ++ KRL + G         +   +    L  + P ++ G +  V   
Sbjct: 271 ---VAEKV-NLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 240 AEGLESAPAALIGLFSGQNVGKQVVAV 266
               E    A   L  G +VGK ++ V
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVMLTV 353

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  102 bits (257), Expect = 1e-25
 Identities = 43/267 (16%), Positives = 86/267 (32%), Gaps = 27/267 (10%)

Query: 9   VAKVLDSENPEFSKGDLVWGMT------GWEEYSLITAPYLFKIQHTDVP--LSYYTG-I 59
           +    D    +   G  V   T       W EY++  A          +   +    G  
Sbjct: 91  IVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIP-----LLDTVRDEDGAA 145

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           + +  +TA    +++   +  +   ++A +  + +L+   AK  G   + +    +++ L
Sbjct: 146 MIVNPLTAI-AMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL 204

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
           LK   G     N K   D  A L+     E   ++ + V G    A+   M  R R    
Sbjct: 205 LK-DIGAAHVLNEKAP-DFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIY 262

Query: 179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYP----KFLEMIIPHIKEGKLV 234
           G +          +     L+ +   +EGF + +    +       +        +G+  
Sbjct: 263 GRLDP----DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS 318

Query: 235 YVEDMAEGLESAPAALIGLFSGQNVGK 261
                   L  A A +      +  GK
Sbjct: 319 TDVTAVVPLAEAIAWVP-AELTKPNGK 344

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  101 bits (255), Expect = 2e-25
 Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 13/209 (6%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           + +  +TA+    +    + G+ V + AA   V     Q AKL G  V+ +AGS+DK+  
Sbjct: 147 IPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR 206

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
            K   G DE  NY    D    ++R    +G D   ++ G    + V+      GRIA  
Sbjct: 207 AK-ALGADETVNYTHP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIA 264

Query: 179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238
           G  S       EG     ++  ++L + G  +          L  I+  ++EGKL  V  
Sbjct: 265 GASSG-----YEGTLPFAHVFYRQLSILGSTMASKSR-----LFPILRFVEEGKLKPVVG 314

Query: 239 MAEGLESAPAALIGLFSGQNVGKQVVAVA 267
               LE+A      L   +  GK V+ V 
Sbjct: 315 QVLPLEAAAEGHRLLEERRVFGKVVLQVG 343

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  101 bits (255), Expect = 2e-25
 Identities = 58/274 (21%), Positives = 98/274 (35%), Gaps = 32/274 (11%)

Query: 19  EFSKGDLVWGMT---GWEEYSLITAPYLFKIQHTDVP--LSYYTG-ILGMPGMTAYVGFY 72
            +  GD V        W E       +++KI     P  +S+       M  +TAYV  +
Sbjct: 81  GYEIGDRVMAFVNYNAWAEVVCTPVEFVYKI-----PDDMSFSEAAAFPMNFVTAYVMLF 135

Query: 73  EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132
           EV + + G  V + +A G VGQ V Q    +    V    S  K + +K+       F+ 
Sbjct: 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKD--SVTHLFDR 193

Query: 133 KEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGV 192
               D    +KR   EG+D+  + + G      L  +K  G     G  +    +     
Sbjct: 194 NA--DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFF 251

Query: 193 H-----------NLMYLVSKRLRMEGFIVLDHYHLYPK------FLEMIIPHIKEGKLVY 235
                       N + L  +   + GF +L+      +       +E +I    + K+  
Sbjct: 252 SFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKP 311

Query: 236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
           V D    LE    A+  +    N+GK ++ V   
Sbjct: 312 VVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  101 bits (254), Expect = 6e-25
 Identities = 52/230 (22%), Positives = 76/230 (33%), Gaps = 31/230 (13%)

Query: 60  LGMPGMTAYVGFYEVCSA--KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
            G+   TAY        A  K G+ V I  ASG +G    QFA   G   +    S  K 
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266

Query: 118 DLLKNKFGFDEAFNYKEEADLN-----------------AALKRYFPEGIDVYFENVGGK 160
           ++ +   G +   +   E                        +    E ID+ FE+ G +
Sbjct: 267 EICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE 325

Query: 161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220
           T  A +   +  G I  C   S Y  +         YL     R+ G     H+  Y + 
Sbjct: 326 TFGASVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMSLKRIIGS----HFANYREA 376

Query: 221 LEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV-APE 269
            E     I +G++         LE    A   +    + GK  V   APE
Sbjct: 377 WEA-NRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLAPE 425

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  101 bits (253), Expect = 9e-25
 Identities = 51/230 (22%), Positives = 72/230 (31%), Gaps = 31/230 (13%)

Query: 60  LGMPGMTAYVGFYEVCSA--KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
             +   TAY        A  K G+ V I  ASG +G    QF K  G   V    S  K 
Sbjct: 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258

Query: 118 DLLKNKFGFDEAFNYKEE-----------------ADLNAALKRYFPEGIDVYFENVGGK 160
             ++   G D   N  E                    L   +        D+ FE+ G  
Sbjct: 259 AAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV 317

Query: 161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220
           T    +   +  G +  CG  S Y         +  YL  K  ++ G    +H       
Sbjct: 318 TFGLSVIVARRGGTVVTCGSSSGYLHT-----FDNRYLWMKLKKIVGSHGANHEE----- 367

Query: 221 LEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV-APE 269
            +      + G +V        L  A  A   + + + VGK  V   APE
Sbjct: 368 QQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMAPE 417

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 97.3 bits (243), Expect = 9e-24
 Identities = 52/257 (20%), Positives = 102/257 (39%), Gaps = 17/257 (6%)

Query: 19  EFSKGDLV-WGMTGW--EEYSLITAPYLFKI--QHTDVPLSYYTGILGMPGMTAYVGFYE 73
            F  GD V +       +   + +   + K+    +D  L  Y   L +  +TA     E
Sbjct: 84  NFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGL-LQVLTALSFTNE 142

Query: 74  VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133
               K G+ V + AA+G VG ++ Q  K+ G + +  A + +K+ + K ++G +   N  
Sbjct: 143 AYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINAS 201

Query: 134 EEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGV 192
           +E D+   + ++   +G+D  F++VG  T +  L  +K +G   + G  S          
Sbjct: 202 KE-DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASG----LIPPF 256

Query: 193 HNLMYLVSKRLRMEGFIVLDHYHLYPKFLEM---IIPHIKEGKLVYVEDMAEGLESAPAA 249
            ++  L  K + +    +  +     ++          +   KL         L     A
Sbjct: 257 -SITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTA 315

Query: 250 LIGLFSGQNVGKQVVAV 266
              + S + VGK V+ +
Sbjct: 316 AADIESRKTVGKLVLEI 332

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 97.0 bits (242), Expect = 1e-23
 Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 25/262 (9%)

Query: 20  FSKGDLV----WGMTGWEEYSLITAPYLFKIQHTDVP--LSYYTG-ILGMPGMTAYVGFY 72
              GD V     G+  W   ++ +   L ++     P  +   +   LG+   TAY    
Sbjct: 106 LKPGDWVIPANAGLGTWRTEAVFSEEALIQV-----PSDIPLQSAATLGVNPCTAYRMLM 160

Query: 73  EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEA 129
           +    + G+ V  +A++  VGQ V Q A  LG   +     +  +  L +     G +  
Sbjct: 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV 220

Query: 130 FNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKP 189
              +E                 +    VGGK+   +L  +   G +   G ++     K 
Sbjct: 221 ITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMA-----KQ 275

Query: 190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYP-----KFLEMIIPHIKEGKLVYVEDMAEGLE 244
             V ++  L+ K L++ GF +      +      + +  +   I+ G+L         L+
Sbjct: 276 PVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQ 335

Query: 245 SAPAALIGLFSGQNVGKQVVAV 266
              +AL          KQ++ +
Sbjct: 336 DYQSALEASMKPFISSKQILTM 357

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 96.1 bits (240), Expect = 2e-23
 Identities = 51/271 (18%), Positives = 93/271 (34%), Gaps = 36/271 (13%)

Query: 19  EFSKGDLVWGMTGWE--------EYSLITAPYLFK----IQHTD---VPLSYYTGILGMP 63
            F  GD V+G+TG          +++ + A  L      +       +PL          
Sbjct: 84  SFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLV--------- 134

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
            +TA+ G  +    + G+ V I    G VG +  Q A   G  V  +A     ++ ++  
Sbjct: 135 FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDLEYVR-D 192

Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
            G       +E  D  A       +G D+ ++ +GG  LDA    +K  G + +C     
Sbjct: 193 LGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWGT 250

Query: 184 YNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKL-VYVEDMAEG 242
           + L  P       Y     L     +  +    + + L      ++ GKL   ++     
Sbjct: 251 HKL-APLSFKQATYSGVFTLHT--LLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFS 307

Query: 243 LESAPAALIGLF----SGQNVGKQVVAVAPE 269
           +    +A   +       +  GK  + V   
Sbjct: 308 IAEIGSAYDAVLGRNDVPRQRGKIAITVEGH 338

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 95.3 bits (238), Expect = 5e-23
 Identities = 36/259 (13%), Positives = 97/259 (37%), Gaps = 16/259 (6%)

Query: 19  EFSKGDLVWGMT---GWEEYSLITAPYLFKIQHTDVP--LSYYTG-ILGMPGMTAYVGFY 72
               G  V  +     W+EY   +A ++       +P  +  +T   + +  +TA+V   
Sbjct: 83  RELIGKRVLPLRGEGTWQEYVKTSADFVVP-----IPDSIDDFTAAQMYINPLTAWVTCT 137

Query: 73  EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132
           E  + +  + + ++A   A+G L  Q +++L   ++    +    + L  + G     + 
Sbjct: 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDT 196

Query: 133 KEEADLNAALKRY-FPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEG 191
                L   +       G D   +++GG   + +  +++  G     G++S   ++    
Sbjct: 197 STA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQVN-WAE 254

Query: 192 VHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVE-DMAEGLESAPAAL 250
           +     + +    +  +      + + +    +I  ++  +L +++      L    AA+
Sbjct: 255 IVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAV 314

Query: 251 IGLFSGQNVGKQVVAVAPE 269
             + S +    +V   + E
Sbjct: 315 DVVQSAEKTKGKVFLTSYE 333

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 95.5 bits (238), Expect = 6e-23
 Identities = 47/275 (17%), Positives = 89/275 (32%), Gaps = 36/275 (13%)

Query: 20  FSKGDLV----WGMTGWEEYSLITAPYLFKIQHTDVPLSYYT--GI-------LGMPGMT 66
              GD V         W  ++L       K+ +     +     G+       + +  +T
Sbjct: 94  LEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT 153

Query: 67  AYVGFYEVCSAKHGECVFI-SAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKVDLLK 121
           AY+          G+  FI +  + AVG+   Q  KLL    +     +    + V  LK
Sbjct: 154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK 213

Query: 122 NKFGFDEAFNYKEE--ADLNAALKRYF---PEGIDVYFENVGGKTLDAVLPNMKIRGRIA 176
            + G  +     +    +    +K +         +    VGGK+   +   +   G + 
Sbjct: 214 -ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLML 272

Query: 177 ACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF----IVLDHYHLYPKFLEMIIPHIKEGK 232
             G +S                + K     GF    ++ ++  L    L  II   +EGK
Sbjct: 273 TYGGMS-----FQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK 327

Query: 233 LVYVEDMA---EGLESAPAALIGLFSGQNVGKQVV 264
           L   + +    +G +          +    GKQ++
Sbjct: 328 LTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLI 362

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 94.2 bits (235), Expect = 1e-22
 Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 36/264 (13%)

Query: 19  EFSKGDLVWGMTGWE----EYSLITAPYLFKIQHTDVP--LSYYTG-ILGMPGMTAYVGF 71
            F KGD V+  +       EY+L     ++K+     P  L +  G  +G+P  TAY   
Sbjct: 108 AFKKGDRVFTSSTISGGYAEYALAADHTVYKL-----PEKLDFKQGAAIGIPYFTAYRAL 162

Query: 72  YEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131
                 K GE V +  ASG VG    Q A+  G  ++G+AG+++   ++  + G  E FN
Sbjct: 163 IHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFN 221

Query: 132 YKEEADLNAALKRY-FPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPE 190
           ++E  +    +K+Y   +GID+  E +    L   L  +   GR+   G      +    
Sbjct: 222 HREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEI---- 276

Query: 191 GVHNLMYLVSKRLRMEGFIVLDHYHLYP-------KFLEMIIPHIKEGKLVYVEDMAEGL 243
              N    ++K   + G        L+        ++   +   ++ G L  V      L
Sbjct: 277 ---NPRDTMAKESSIIGV------TLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPL 327

Query: 244 ESAPAALIGLF-SGQNVGKQVVAV 266
           E    A   +       GK ++ +
Sbjct: 328 EKVAEAHENIIHGSGATGKMILLL 351

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 93.4 bits (233), Expect = 2e-22
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 9/169 (5%)

Query: 19  EFSKGDLV-WGMTGW---EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74
            F  GD V +G        E  ++    L K+    V       ++ + G+T      + 
Sbjct: 78  RFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLAD-SVSFEQAAALM-LKGLTVQYLLRQT 135

Query: 75  CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE 134
              K GE +   AA+G VG L  Q+AK LG  ++G+  S +K    K   G  E  +Y  
Sbjct: 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSH 194

Query: 135 EADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           E D+   +      +   V ++ VG  T    L ++  RG + + G  S
Sbjct: 195 E-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 93.1 bits (232), Expect = 2e-22
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 9/169 (5%)

Query: 19  EFSKGDLV-WGMTGW---EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74
               GD V +  +          I A     +    +          + G+T Y    + 
Sbjct: 78  HIKAGDRVVYAQSALGAYSSVHNIIADKAAILPA-AISFEQAAASF-LKGLTVYYLLRKT 135

Query: 75  CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE 134
              K  E     AA+G VG +  Q+AK LG  ++G+ G+  K      K G  +  NY+E
Sbjct: 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYRE 194

Query: 135 EADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
           E DL   LK     + + V +++VG  T +  L  ++ RG + + G  S
Sbjct: 195 E-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 93.4 bits (233), Expect = 3e-22
 Identities = 51/206 (24%), Positives = 76/206 (36%), Gaps = 15/206 (7%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           L   G+TA+    E    + G+ V +    G V     Q AK  G  V+ ++ S++K+D 
Sbjct: 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDR 228

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
                G D   N  EE D    +       G D   E  GG  L   L  +   GRI+  
Sbjct: 229 AF-ALGADHGINRLEE-DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVI 286

Query: 179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238
           G++        E    +  L+ K   ++G  V           ++ +  +    L  V D
Sbjct: 287 GVLEG-----FEVSGPVGPLLLKSPVVQGISVGHRRA----LEDL-VGAVDRLGLKPVID 336

Query: 239 MAEGLESAPAALIGLFSGQNVGKQVV 264
           M       P AL  L  G   GK V+
Sbjct: 337 MRYKFTEVPEALAHLDRGP-FGKVVI 361

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 93.5 bits (233), Expect = 3e-22
 Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 29/279 (10%)

Query: 4   ISGYGVAKVLDSENPEFSKGDLVWGMT---GWEEYSLITAPYLFKIQHTDVP--LSYYTG 58
            SG  VA++       +  GD    +    G  +Y  +    L  I     P  L+    
Sbjct: 87  ASG-HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPI-----PEGLTLTQA 140

Query: 59  ILGMP--GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 116
              +P   +TA+   + V + + G+ V I A    VG    Q  ++ G   + +AGS+ K
Sbjct: 141 -AAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK 199

Query: 117 VDLLKNKFGFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           + + + K G    FNYK+E D + A  ++    G+++  + +GG   +  +  + + GR 
Sbjct: 200 LQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRW 257

Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF-----IVLDHYHLYPKFLEMIIPHI-- 228
              G++   +++ P        L+ KR  +               L   F E I+PH   
Sbjct: 258 VLYGLMGGGDINGP----LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFST 313

Query: 229 -KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
               +L+ V D    +     A   + + +N+GK V+ +
Sbjct: 314 EGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 92.3 bits (230), Expect = 5e-22
 Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 17/255 (6%)

Query: 19  EFSKGDLV-WGMTGW---EEYSLITAPYLFKI-QHTDVPLSYYTGILGMPGMTAYVGFYE 73
           +F+ G+ V   +       +  L  A  L K+ +  D+   +  G++ + GMTA    ++
Sbjct: 81  DFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQ 139

Query: 74  VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133
               K G+ V I AA+G +G ++  +A+ LG  V+G+  +++K +  + K G     NY 
Sbjct: 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYS 198

Query: 134 EEADLNAALKRYFP-EGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGV 192
            + D    ++     +G+DV ++++G  TL   L  ++ RG  AA G  S       + +
Sbjct: 199 TQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASG----VADPI 253

Query: 193 HNLMYLVSKR-LRMEGFIVLDHYHLYPKFLEM---IIPHIKEGKLVYVEDMAEGLESAPA 248
             +  L  +  L +    +  +     +  E    +   +K G L         L  A A
Sbjct: 254 RVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAA 313

Query: 249 ALIGLFSGQNVGKQV 263
           A   +   Q +G  V
Sbjct: 314 AHKYMGGRQTIGSIV 328

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 60/262 (22%), Positives = 89/262 (33%), Gaps = 43/262 (16%)

Query: 19  EFSKGDLVWGMTGWE-------EYSLITAPYLFK----IQHTD---VPLSYYTGILGMPG 64
             + GD V G+ G+        EY   +   + +    +       +P +         G
Sbjct: 88  NVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTA---------G 138

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA          K G+ V I A +G VG L  Q AK  G  V+ +A SK     LK   
Sbjct: 139 LTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-AL 195

Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
           G ++  NY EE D   A+       +D   + VGG      +  +K  G I +       
Sbjct: 196 GAEQCINYHEE-DFLLAI----STPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPT---- 246

Query: 185 NLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLE 244
                     +     K  R  G +   +     + L  +   + E KL         L 
Sbjct: 247 ----ITAGRVIEVAKQKHRRAFGLLKQFN----IEELHYLGKLVSEDKLRIEISRIFQLS 298

Query: 245 SAPAALIGLFSGQNVGKQVVAV 266
            A  A   L +G   GK V  V
Sbjct: 299 EAVTAHELLETGHVRGKLVFKV 320

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 49/260 (18%), Positives = 82/260 (31%), Gaps = 25/260 (9%)

Query: 16  ENPEFSKGDLVWGMT---GWEEYSLITAPYLFKIQHTDVP--LSYYTG-ILGMPGMTAYV 69
           E      GD V       G+ E   +    +        P  L       L     T Y 
Sbjct: 95  EGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPT-----PPQLDDAEAVALIANYHTMYF 149

Query: 70  GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA 129
            +      + GE V +  A+G +G    Q AK +G  V+         + +K   G D  
Sbjct: 150 AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIV 208

Query: 130 FNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDK 188
              +E      A++      G+D+  + +GG   D  +  +   GR+   G  +      
Sbjct: 209 LPLEE--GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAG---GI 263

Query: 189 PEGVHNLMYLVSKRLRMEGF----IVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLE 244
           P     +  L+ +   + G      +  H     +    +   + EG    V      L 
Sbjct: 264 PT--IKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRPPV-SARIPLS 320

Query: 245 SAPAALIGLFSGQNVGKQVV 264
               AL     G+  GK V+
Sbjct: 321 EGRQALQDFADGKVYGKMVL 340

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 89.0 bits (221), Expect = 1e-20
 Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 40/274 (14%)

Query: 19  EFSKGDLVWGMTGWE------EYSLITAPYLFK----IQHTD---VPLSYYTGILGMPGM 65
            F  GD VW            E+ +++   +      + HT    +P            +
Sbjct: 115 YFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYV---------AL 165

Query: 66  TAYVGFYEV----CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
           TA+    +V         G+ V I  ASG VG    Q  K    +V     S+D  +L++
Sbjct: 166 TAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR 224

Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIR--GRIAACG 179
            K G D+  +YK    +   LK    +  D   +NVGG T       +K           
Sbjct: 225 -KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLV 280

Query: 180 MISQYNLDK----PEGVHNLMYLVSKRLRMEGFIVLDHYHLY---PKFLEMIIPHIKEGK 232
                N+D+       +   + + SK L+     V   +  +      L+ I   +  GK
Sbjct: 281 TPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGK 340

Query: 233 LVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
           +  V +        P A + +  G   GK V+ V
Sbjct: 341 IRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 88.2 bits (219), Expect = 2e-20
 Identities = 40/303 (13%), Positives = 88/303 (29%), Gaps = 48/303 (15%)

Query: 3   PISGYGVAKV---LDSENPEFSKGDLVWGMT-----------GWEEYSLITAPYLFKIQH 48
              G   A     + S+      GD V+G              + +Y++       KI  
Sbjct: 64  AFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKI-- 121

Query: 49  TDVP--LSYYTG-ILGMPGMTAYVGFYEV------------CSAKHGECVFISAASGAVG 93
              P  LS+     L     TA +    +             +      V +   S A  
Sbjct: 122 ---PKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATA 178

Query: 94  QLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVY 153
            +  Q  +L G   + +  S    DL K   G +E F+Y+   +L   ++ Y    +   
Sbjct: 179 TVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NLAQTIRTYTKNNLRYA 235

Query: 154 FENVGGK-TLDAVLPNM-KIRGRIAACGMISQYNLDKP--EGVHNLMYLVSKRLRMEGFI 209
            + +    +       + +  G   +     ++   +        L   +          
Sbjct: 236 LDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAP 295

Query: 210 VL-----DHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEGLESAPAALIGLFSGQNVGKQ 262
                  +          +    +++G+L    +  +  G +     +  +  G+  G++
Sbjct: 296 YGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEK 355

Query: 263 VVA 265
           +V 
Sbjct: 356 LVV 358

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 64/282 (22%), Positives = 99/282 (35%), Gaps = 56/282 (19%)

Query: 20  FSKGDLVWGMTGWE------EYSLITAPYLFK----IQHTD---VPLSYYTGILGMPGMT 66
           F++GD+V+     +      EY LI    + K    I       +PL   TGI      T
Sbjct: 81  FNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPL---TGI------T 131

Query: 67  AY------VGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
           AY       G     +   G+ + I   +G VG +  Q AK  G  V+ +A   + ++  
Sbjct: 132 AYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT 191

Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT-LDAVLPNMKIRGRIAACG 179
           K K G D   N+KE   L    K    E +D  F         D ++  +K RG IA   
Sbjct: 192 K-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATI- 247

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLR----------MEGFIVLDHYHLYPKFLEMIIPHIK 229
                     E   +L  L  K L           +     +  +H   ++LE I   ++
Sbjct: 248 -------VAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHH---EYLEDITNKVE 297

Query: 230 EGKLVYVEDMAEG---LESAPAALIGLFSGQNVGKQVVAVAP 268
           +                E+   A   L S   +GK V+ +  
Sbjct: 298 QNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE 339

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 76.4 bits (189), Expect = 2e-16
 Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 28/253 (11%)

Query: 23  GDLVWGMT---GWEEYSLITAPYLFKIQHTDVP--LSYYTG-ILGMPGMTAYVGFYEVCS 76
           G     +    G  E   +    L  +     P  LS        +  +TAY+   +   
Sbjct: 69  GRRYAALVPQGGLAERVAVPKGALLPL-----PEGLSPEEAAAFPVSFLTAYLAL-KRAQ 122

Query: 77  AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEA 136
           A+ GE V + AA+GA+G    Q A+ +G  V+ +A   +K+ L     G +EA  Y E  
Sbjct: 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP 181

Query: 137 DLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLM 196
           +   A       G+D+  E V GK ++  L  +   GR+   G       +        +
Sbjct: 182 ERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEG---EVAPI--PPL 230

Query: 197 YLVSKRLRMEGF---IVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGL 253
            L+ + L + GF    +L    L  + L  ++P +   +L  V         A AA   L
Sbjct: 231 RLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL-GRELRPVVGPVFPFAEAEAAFRAL 289

Query: 254 FSGQNVGKQVVAV 266
               + GK VV +
Sbjct: 290 LDRGHTGKVVVRL 302

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 37/259 (14%)

Query: 19  EFSKGDLVWGMTGWE------EYSLITAPYLFK----IQHTD---VPLSYYTGILGMPGM 65
               G  V   T  +      E++++    +      +       +P          P +
Sbjct: 79  SKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPC---------PLL 129

Query: 66  TAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125
           TA+  F E         V I    GAV  L+ Q     G  V     +     L   K G
Sbjct: 130 TAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDL-VSASLSQALAA-KRG 185

Query: 126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYN 185
               +    +            +     F+ V  +   A++P++K  G I          
Sbjct: 186 VRHLYREPSQV----------TQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPAP 235

Query: 186 LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLES 245
           +D P     + Y       +  F     + +  +  E ++  I +GK+          E 
Sbjct: 236 ID-PAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQ 294

Query: 246 APAALIGLFSGQNVGKQVV 264
              AL      +      +
Sbjct: 295 MIEALDHSEQTKLKTVLTL 313

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 75.1 bits (185), Expect = 6e-16
 Identities = 67/283 (23%), Positives = 98/283 (34%), Gaps = 56/283 (19%)

Query: 12  VLDSENPEFSKGDLV----W--GMT---GWEEYSLITAPYLFKIQHTDVPL-----SYYT 57
           V  SE+P F  G  V    W  G     G  E + +   +L       V L     S   
Sbjct: 69  VHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWL-------VALPAGLSSRNA 121

Query: 58  GILGMPGMTAYVGFYEVCSAK---HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 114
            I+G  G TA +    +  A        V ++ ASG VG         LG  V   +G +
Sbjct: 122 MIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRE 181

Query: 115 DKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGR 174
                LK   G +   +  E A+     K+ +   ID     VG K L  VL  M   G 
Sbjct: 182 STHGYLK-SLGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAKVLAQMNYGGC 236

Query: 175 IAACGMISQYNLD-----------KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEM 223
           +AACG+   + L            + +GV ++M   ++R      +V D   L   F   
Sbjct: 237 VAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKD---LPESFYAQ 293

Query: 224 IIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266
               I              L  AP     + + Q  G+ +V +
Sbjct: 294 AATEI-------------TLADAPKFADAIINNQVQGRTLVKI 323

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 75.7 bits (186), Expect = 7e-16
 Identities = 36/194 (18%), Positives = 60/194 (30%), Gaps = 15/194 (7%)

Query: 6   GYGVAKVLDSENPEFSKGDLVWGMTG---WEEYSLITAPYLFKIQHTDVP--LSYYTGI- 59
           G GV     S     +         G   + +Y  I A          +P   +   G  
Sbjct: 98  GAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLV-----LPEGATPADGAS 152

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             +  +TA  G  E    +    +  +AA+  +GQ++ Q     G  +V     +++ DL
Sbjct: 153 SFVNPLTAL-GMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADL 211

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRY-FPEGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
           LK   G     N          L       G  + F+  GG  L   +          + 
Sbjct: 212 LK-AQGAVHVCNAASP-TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSA 269

Query: 179 GMISQYNLDKPEGV 192
              S+Y     + V
Sbjct: 270 REYSRYGSTTHKQV 283

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 23/191 (12%)

Query: 12  VLDSENPEFSKGDLV----W--GMT---GWEEYSLITAPYLFKIQHTDVPLS-YYTGILG 61
           V+ S++P F +GD V    +  G+T   G+ EY+ +   +L  +      L+      +G
Sbjct: 72  VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKG---LTLKEAMAIG 128

Query: 62  MPGMTAYVG---FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
             G TA +      E         V ++ A+G VG L        G  V  S G   + D
Sbjct: 129 TAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD 188

Query: 119 LLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 176
            L+   G  E    ++     +    K+ +   +D     VGG+TL  VL  M+  G +A
Sbjct: 189 YLR-VLGAKEVLAREDVMAERIRPLDKQRWAAAVD----PVGGRTLATVLSRMRYGGAVA 243

Query: 177 ACGMISQYNLD 187
             G+     + 
Sbjct: 244 VSGLTGGAEVP 254

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 23/191 (12%)

Query: 12  VLDSENPEFSKGDLV----W--GMT---GWEEYSLITAPYLFKIQHTDVPLS-YYTGILG 61
           V+ S +P F++GD V    +  G++   G  EY+ +   +L  +      LS     + G
Sbjct: 73  VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQN---LSLKEAMVYG 129

Query: 62  MPGMTAYVGFYEVCSA---KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
             G TA +  + +           V ++ A+G VG +        G  VV S G+++  D
Sbjct: 130 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD 189

Query: 119 LLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIA 176
            LK + G  E  + ++  +  L A  K+ +   +D     VGGK L ++L  ++  G +A
Sbjct: 190 YLK-QLGASEVISREDVYDGTLKALSKQQWQGAVD----PVGGKQLASLLSKIQYGGSVA 244

Query: 177 ACGMISQYNLD 187
             G+     + 
Sbjct: 245 VSGLTGGGEVP 255

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 68.1 bits (167), Expect = 2e-13
 Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 32/180 (17%)

Query: 19  EFSKGDLVWGMTGWE------EYSLITAPYLFK----IQHTD---VPLSYYTGILGMPGM 65
            F  GD V+            E+ L+    + +    +   +   +PL   T I      
Sbjct: 102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPL---TSI------ 152

Query: 66  TAYVGFYEV-----CSAKHGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKVDL 119
           TA+  F++              + I   +G VG +  Q A+      V+ +A   +  + 
Sbjct: 153 TAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW 212

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGID-VYFENVGGKTLDAVLPNMKIRGRIAAC 178
           +K   G     ++ +   L A +          V+      K    +   +  +GR    
Sbjct: 213 VK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 44/252 (17%), Positives = 94/252 (37%), Gaps = 22/252 (8%)

Query: 16  ENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75
           ++P +  G    G   + EY ++            +        L   G+T Y       
Sbjct: 113 DSPRWL-GINFDG--AYAEYVIVPHYKYMYKLR-RLNAVE-AAPLTCSGITTYRAV-RKA 166

Query: 76  SAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKE 134
           S    + + +  A G +G +  Q AK +    ++G    ++ V+  K + G D   N   
Sbjct: 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM 225

Query: 135 EADLNAALKRYFP-EGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGV 192
           + D  A ++R    +G+D   +     KTL      +  +G+    G+         +  
Sbjct: 226 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLH 278

Query: 193 HNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIG 252
           ++   +    ++  G +V  +   +   + +     + GK+  +      LE A  A+  
Sbjct: 279 YHAPLITLSEIQFVGSLVG-NQSDFLGIMRL----AEAGKVKPMITKTMKLEEANEAIDN 333

Query: 253 LFSGQNVGKQVV 264
           L + + +G+QV+
Sbjct: 334 LENFKAIGRQVL 345

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 56.0 bits (136), Expect = 9e-10
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 65  MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
           +TA+    EV     GE V I +A+G VG      AK++G  +  +AGS  K ++L  + 
Sbjct: 24  LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL 82

Query: 125 GFDEAFN 131
           G +   +
Sbjct: 83  GVEYVGD 89

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 41/248 (16%), Positives = 89/248 (35%), Gaps = 25/248 (10%)

Query: 34  EYSLITAPYLFKI----QHTDVPLSYYTGILGMPGMTAYVG-FYEVCSAKHGECVFISAA 88
           EY  + A Y + +       +    +  G L  P   AY          + G+ V I   
Sbjct: 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG 222

Query: 89  SGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF- 146
            G +G       K  G   V+ S  S+ + +L K + G D   +  +E +   A+  Y  
Sbjct: 223 -GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVEAVLDYTN 279

Query: 147 PEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205
             G  ++ E  G  + +   +  +  R R      ++       +          +R ++
Sbjct: 280 GLGAKLFLEATGVPQLVWPQIEEVIWRAR-GINATVAIVARADAKIPLTGEVFQVRRAQI 338

Query: 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVY----VEDMAEGLESAPAALIGLFSGQNVGK 261
            G      +  +P+ + ++   +   K++     +E++ E ++        L + +++ K
Sbjct: 339 VGSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKR-------LQTDKSLVK 391

Query: 262 QVVAVAPE 269
             V +  E
Sbjct: 392 --VTMLNE 397

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 55.3 bits (133), Expect = 8e-09
 Identities = 51/229 (22%), Positives = 87/229 (37%), Gaps = 27/229 (11%)

Query: 51   VPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGS 110
            VP+ Y          TAY         + GE V I + SG VGQ     A   GC V  +
Sbjct: 1648 VPIVY---------TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTT 1698

Query: 111  AGSKDKVDLLKNKF-GFDEA---------FNYKEEADLNAALKRYFPEGIDVYFENVGGK 160
             GS +K   L+ +F   DE          F   E+  L     +    G+D+   ++  +
Sbjct: 1699 VGSAEKRAYLQARFPQLDETCFANSRDTSF---EQHVLRHTAGK----GVDLVLNSLAEE 1751

Query: 161  TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220
             L A +  +   GR    G     N +   G+   +  V+    +   +  +    + + 
Sbjct: 1752 KLQASVRCLAQHGRFLEIGKFDLSN-NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEV 1810

Query: 221  LEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
             E++   I+EG +  ++          AA   +  G+++GK V+ V  E
Sbjct: 1811 SELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 18/109 (16%)

Query: 20  FSKGDLVWGMT--GWEEYSLITAPYLFKIQHTD-------VPLSYYTGILGMPGMTAYVG 70
            + GD V GM    +   ++     + +I           VP+ +         +TAY  
Sbjct: 286 LAPGDRVMGMIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVF---------LTAYYA 336

Query: 71  FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             ++   + GE + + +A+G VG    Q A+ LG  V  +A       +
Sbjct: 337 LVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV 385

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 48.7 bits (117), Expect = 7e-07
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 11/147 (7%)

Query: 80  GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138
           G+ V I+ A G +G +     +  G   ++ S  +  ++   +  +  D   N  EE DL
Sbjct: 165 GKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE-DL 220

Query: 139 NAALKRYFPEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMY 197
              ++R    G++V  E  G    +   L  +   G     G+ S      P        
Sbjct: 221 LEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPS-----DPIRFDLAGE 275

Query: 198 LVSKRLRMEGFIVLDHYHLYPKFLEMI 224
           LV + +   G      +  + +   ++
Sbjct: 276 LVMRGITAFGIAGRRLWQTWMQGTALV 302

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 29/182 (15%)

Query: 80  GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138
           G  V I    G +G L  Q A+L G   V+ S     K  L + + G     +     D+
Sbjct: 183 GSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG-DV 239

Query: 139 NAALKRYF---PEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH- 193
             A+       P G+DV  E  G  +T+       K  G +   G+     L + E V  
Sbjct: 240 VEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGV-----LPQGEKVEI 294

Query: 194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKL---------VYVEDMAEGLE 244
               ++ + LR+ G     +  ++ +  ++    +  G +         + +++  + + 
Sbjct: 295 EPFDILFRELRVLG--SFINPFVHRRAADL----VATGAIEIDRMISRRISLDEAPDVIS 348

Query: 245 SA 246
           + 
Sbjct: 349 NP 350

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 10/149 (6%)

Query: 80  GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138
            + V I  A G +G L  Q A  LG   V     S +K+ L K  FG  + FN  E    
Sbjct: 161 NKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM-SA 217

Query: 139 NAALKRYF-PEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLM 196
                         +  E  G  +T++  +       ++A  G + Q   D         
Sbjct: 218 PQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ---DLHLTSATFG 274

Query: 197 YLVSKRLRMEG-FIVLDHYHLYPKFLEMI 224
            ++ K L + G ++         ++    
Sbjct: 275 KILRKELTVIGSWMNYSSPWPGQEWETAS 303

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 45.6 bits (109), Expect = 7e-06
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 14/151 (9%)

Query: 64  GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
           G+T Y    +  +   G  V IS A+G +G L  Q+AK +G  V+G  G + K +L +  
Sbjct: 155 GITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212

Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT-LDAVLPNMKIRGRIAACGMIS 182
            G +   ++ +E D+  A+ +    G          +  ++A    ++  G     GM  
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM-- 270

Query: 183 QYNLDKPEGVH---NLMYLVSKRLRMEGFIV 210
                 P G     ++   V K + + G  V
Sbjct: 271 ------PAGAKCCSDVFNQVVKSISIVGSYV 295

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 14/149 (9%)

Query: 80  GECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEE--A 136
           G  V +  A G +G +    AK +G   VV +  S  ++   K + G D      +E   
Sbjct: 172 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKESPQ 229

Query: 137 DLNAALKRYFPEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL 195
           ++   ++       +V  E  G   ++ A +   +  G +   G+              L
Sbjct: 230 EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLG------SEMTTVPL 283

Query: 196 MYLVSKRLRMEGFIVLDHYHLYPKFLEMI 224
           ++   + + ++G  V  + + +P  + M+
Sbjct: 284 LHAAIREVDIKG--VFRYCNTWPVAISML 310

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 40/242 (16%), Positives = 79/242 (32%), Gaps = 30/242 (12%)

Query: 31  GWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA-KHGECVFISAAS 89
              EY ++ +         D+       +    G+T Y     V      G    +    
Sbjct: 124 SMAEYMIVDSARHLVPIG-DLDPVAAAPLTD-AGLTPYHAISRVLPLLGPGSTAVVIGV- 180

Query: 90  GAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF-P 147
           G +G +  Q  + +    V+      D++ L + + G D A           A++     
Sbjct: 181 GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSGA--GAADAIRELTGG 237

Query: 148 EGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME 206
           +G    F+ VG   T+D     + + G I+  G+ +              +++     + 
Sbjct: 238 QGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHA------GAHAKVGFFMIPFGASVV 291

Query: 207 GFIV---LDHYHLYPKFLEMIIPHIKEGKL-VYVEDMAEGLESAPAALIGLFSGQNVGKQ 262
                   +        L  ++   + G+L ++ E     L+  PAA   L  G   G+ 
Sbjct: 292 TPYWGTRSE--------LMEVVALARAGRLDIHTE--TFTLDEGPAAYRRLREGSIRGRG 341

Query: 263 VV 264
           VV
Sbjct: 342 VV 343

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	269
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.93
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.15
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.1
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.99
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.98
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.8
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.76
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.69
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.65
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.62
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.59
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.46
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.44
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.41
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.4
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.38
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.37
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.33
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.33
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.31
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.31
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.29
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.29
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.28
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.27
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.25
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.25
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.22
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.21
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.2
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.2
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.19
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.18
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.17
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.16
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.16
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.16
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.15
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.15
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.14
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.14
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.14
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.14
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.14
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.14
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.12
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.12
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.12
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.12
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.11
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.11
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.1
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.09
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.09
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.08
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.08
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.08
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.08
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.07
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.07
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.07
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.06
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.06
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.05
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.05
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.05
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.05
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.04
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.04
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.04
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.03
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.03
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.03
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.03
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.03
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.03
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.03
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.03
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.02
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.02
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.02
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.02
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.02
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.02
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.01
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.01
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.0
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	98.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.99
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.99
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.99
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.99
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.99
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.99
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.99
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.98
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.98
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.98
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.97
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.97
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.97
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.97
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.96
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.96
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.96
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.96
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.96
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.95
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.95
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.95
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.94
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.94
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.93
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.93
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.93
1spx_A	278	Short-chain reductase family member (5L265); paral	97.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.92
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.92
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.92
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.91
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.91
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.91
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.91
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.9
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.9
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.9
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.9
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.88
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.88
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.88
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.88
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.87
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.87
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.87
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.86
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.86
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.85
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.85
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.84
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.84
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.84
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.84
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.84
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.83
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.82
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.82
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.82
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.82
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.82
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.81
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.81
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.81
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.81
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.8
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.8
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.8
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.79
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.79
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.79
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.79
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.79
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.78
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.78
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.78
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.78
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.77
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.77
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.77
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.77
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.77
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.76
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.76
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.76
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.75
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.75
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.75
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.75
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.75
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.75
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.74
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.74
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.74
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.72
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.72
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.72
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.71
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.71
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.71
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.7
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.69
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.69
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.69
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.69
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.68
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.68
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.68
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.67
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.67
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.67
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.66
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.66
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.66
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.65
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.65
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.63
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.63
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.63
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.63
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.62
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.62
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.61
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.61
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.61
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.6
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	97.6
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.59
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.59
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.58
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.58
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.57
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.56
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.56
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.56
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.55
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.55
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.55
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.55
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	97.54
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.54
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	97.53
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.53
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.53
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.52
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.51
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.51
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	97.5
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.5
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.49
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.49
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	97.48
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.47
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.47
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	97.47
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	97.46
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.46
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	97.44
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.44
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.43
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.43
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.42
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.42
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.42
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.42
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.41
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.41
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.41
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.41
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.37
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.36
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.36
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.35
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.35
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.34
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.32
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.32
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.32
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	97.32
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.3
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.3
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	97.3
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.28
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.28
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.27
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.27
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.27
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	97.27
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.27
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.25
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.25
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.24
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	97.24
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.24
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.23
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.22
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.22
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.21
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.2
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	97.19
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.18
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.17
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.17
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.17
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.16
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	97.14
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.14
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.14
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.14
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.12
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.11
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.11
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	97.11
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.11
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.11
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.11
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	97.1
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.09
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	97.07
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	97.07
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.07
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.06
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	97.06
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.06
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	97.06
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.05
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.04
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	97.04
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.04
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.04
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.03
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	97.03
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.03
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	97.03
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	97.03
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	97.03
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	97.01
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	97.01
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.01
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.01
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	97.01
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	97.0
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	97.0
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	97.0
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.99
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.98
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.97
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.97
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.97
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.96
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.96
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.95
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.95
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.94
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.93
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.92
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.92
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.91
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	96.9
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.9
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.9
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.89
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.89
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.88
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.88
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	96.87
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.87
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.86
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.86
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	96.86
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.85
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.85
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.85
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.84
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.84
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	96.84
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.84
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.84
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.83
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.83
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.83
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.83
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.83
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.82
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.81
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.81
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.8
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.8
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.8
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.79
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.79
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.79
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	96.77
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.76
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.76
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	96.75
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.75
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.75
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.74
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.73
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.73
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.73
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.73
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	96.73
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.72
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.72
2i7c_A	283	Spermidine synthase; transferase, structural genom	96.71
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.71
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.71
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.71
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.71
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.69
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	96.69
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	96.69
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.68
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.68
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.67
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.67
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	96.66

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.6e-43  Score=294.34  Aligned_cols=256  Identities=20%  Similarity=0.251  Sum_probs=226.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEec-CCceeecCCCCCCcchh---hhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLIT-APYLFKIQHTDVPLSYY---TGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~-~~~~~~~~p~~~~~~~~---~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      -|++|+|+++|++|++|++||+|+++  |+|+||++++ .+.++++ |++++.. +   +|++++.+.|||+++.+.+++
T Consensus        69 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~~  146 (334)
T 3qwb_A           69 REASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYHV  146 (334)
T ss_dssp             SEEEEEEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSSEEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcceEEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhccC
Confidence            47889999999999999999999976  8999999999 9999999 9986554 4   578899999999999877899


Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~  156 (269)
                      +++++|||+||+|++|++++|+++.+|++|+++++++++.+.++ ++|++.++|+++. ++.+.+++.+++ ++|++|||
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEEC
Confidence            99999999999999999999999999999999999999999998 9999999999887 899999999877 99999999


Q ss_pred             CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCCCe
Q 024337          157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~  233 (269)
                      +|...++.++++++++|+++.+|...+     .....+...++.+++++.++....+   +....+.++.+++++.+|++
T Consensus       225 ~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  299 (334)
T 3qwb_A          225 VGKDTFEISLAALKRKGVFVSFGNASG-----LIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKL  299 (334)
T ss_dssp             CGGGGHHHHHHHEEEEEEEEECCCTTC-----CCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             CChHHHHHHHHHhccCCEEEEEcCCCC-----CCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCc
Confidence            999999999999999999999987542     2223455567788999988766544   22344567899999999999


Q ss_pred             eeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++.++++|+++++++|++.+.+++..||+|+++++
T Consensus       300 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          300 NIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             CCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             cCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            99998999999999999999999999999999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=9.7e-44  Score=297.47  Aligned_cols=254  Identities=21%  Similarity=0.341  Sum_probs=224.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      -|++|+|+++|++|+.|++||+|+++   |+|+||+++|++.++++ |++++.. ++|++++++.|||+++.+.++++++
T Consensus        91 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g  168 (353)
T 4dup_A           91 LELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPF-PKGYDAV-KAAALPETFFTVWANLFQMAGLTEG  168 (353)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEEC-CTTCCHH-HHHTSHHHHHHHHHHHTTTTCCCTT
T ss_pred             cccEEEEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCC
Confidence            46789999999999999999999987   89999999999999999 9985544 5778999999999999888999999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      ++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+++.+++++|++|||+|..
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~  246 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAA  246 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCCGG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCCHH
Confidence            99999999999999999999999999999999999999999 9999999999887 888888888844999999999999


Q ss_pred             hHhhhHhhhhcCCEEEEEeccccccCCCCCCc-cchHHHhhcceeeeeeeeccccc-----chHHHHHHHHHHHHCCCee
Q 024337          161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGV-HNLMYLVSKRLRMEGFIVLDHYH-----LYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~  234 (269)
                      .+..++++++++|+++.+|...+     .... .++..++.+++++.++....+..     ...+.++.+++++++|+++
T Consensus       247 ~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  321 (353)
T 4dup_A          247 YFERNIASLAKDGCLSIIAFLGG-----AVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA  321 (353)
T ss_dssp             GHHHHHHTEEEEEEEEECCCTTC-----SEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC
T ss_pred             HHHHHHHHhccCCEEEEEEecCC-----CcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCcc
Confidence            99999999999999999987542     1122 45667888999999988765421     1223478899999999999


Q ss_pred             eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.++++|+++++++|++.+.+++..||+|+++
T Consensus       322 ~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          322 PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999999999999999999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.4e-43  Score=296.18  Aligned_cols=247  Identities=25%  Similarity=0.297  Sum_probs=221.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------cceeeEEEecCCceeecCCCCCCcchh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------TGWEEYSLITAPYLFKIQHTDVPLSYY   56 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~   56 (269)
                      -|++|+|+++|++|+.|++||+|++.                           |+|+||+++|++.++++ |++++.. +
T Consensus        89 hE~~G~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~  166 (363)
T 3uog_A           89 SDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAA-PKSLDAA-E  166 (363)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEEC-CTTSCHH-H
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEEC-CCCCCHH-H
Confidence            57889999999999999999999875                           89999999999999999 9985544 5


Q ss_pred             hhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChh
Q 024337           57 TGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEA  136 (269)
Q Consensus        57 ~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~  136 (269)
                      +|++++++.|||+++.+.++++++++|||+| +|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|.+.. 
T Consensus       167 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-  243 (363)
T 3uog_A          167 ASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE-  243 (363)
T ss_dssp             HHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-
T ss_pred             HhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCCCEEEcCCcc-
Confidence            7889999999999998789999999999999 699999999999999999999999999999998 9999999995545 


Q ss_pred             hHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccccc
Q 024337          137 DLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH  215 (269)
Q Consensus       137 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (269)
                      ++.+.+++.+++ ++|++|||+|...+..++++++++|+++.+|...+     .....+...++.+++++.++....   
T Consensus       244 ~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~---  315 (363)
T 3uog_A          244 DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG-----FEVSGPVGPLLLKSPVVQGISVGH---  315 (363)
T ss_dssp             CHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSS-----CEECCBTTHHHHTCCEEEECCCCC---
T ss_pred             cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCC-----cccCcCHHHHHhCCcEEEEEecCC---
Confidence            888999998887 99999999999899999999999999999987543     122345567888999999987654   


Q ss_pred             chHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          216 LYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       216 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                        .+.++.+++++.+|++++.++++|+|+++++|++.+.+++ .||+|+++
T Consensus       316 --~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          316 --RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             --HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             --HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence              6789999999999999999999999999999999999998 89999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.5e-43  Score=293.76  Aligned_cols=251  Identities=18%  Similarity=0.237  Sum_probs=217.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      -|++|+|+++|++++ |++||+|+++   |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.++++++
T Consensus        84 ~E~~G~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g  160 (342)
T 4eye_A           84 IETAGVVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSNILPT-PPQLDDA-EAVALIANYHTMYFAYARRGQLRAG  160 (342)
T ss_dssp             SEEEEEEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGGEEEC-CTTSCHH-HHHHHTTHHHHHHHHHHTTSCCCTT
T ss_pred             eeEEEEEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHHeEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCC
Confidence            578899999999999 9999999987   79999999999999999 9985444 4779999999999999888999999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++|||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++|++ . ++.+.+++.+++ ++|++|||+|.
T Consensus       161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCch
Confidence            99999999999999999999999999999999999999999 99999999998 5 899999999988 99999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHCCCeee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~  235 (269)
                      ..+..++++++++|+++.+|...+.     ....++..++.+++++.++....+    +....+.++.+++++++| +++
T Consensus       238 ~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~  311 (342)
T 4eye_A          238 PAFDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRP  311 (342)
T ss_dssp             -CHHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCC
T ss_pred             hHHHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCC
Confidence            9999999999999999999875421     122333456789999999876543    344557799999999999 999


Q ss_pred             eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .++++|+++++++|++.+.+++..||+|+++
T Consensus       312 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          312 PVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             CEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999999999999999999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=5.8e-43  Score=289.78  Aligned_cols=255  Identities=24%  Similarity=0.296  Sum_probs=222.2

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      .-|++|+|+++|++|++|++||+|++.    |+|+||+++|++.++++ |++++.. ++|++++.+.|+|+++.+.++++
T Consensus        62 G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~  139 (325)
T 3jyn_A           62 GAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKL-ADSVSFE-QAAALMLKGLTVQYLLRQTYQVK  139 (325)
T ss_dssp             CCCEEEEEEEECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGGEEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             CceeEEEEEEECCCCCCCCCCCEEEEecCCCccccceEEecHHHeEEC-CCCCCHH-HHhhhhhhHHHHHHHHHHhcCCC
Confidence            357899999999999999999999875    89999999999999999 9985544 57888999999999998888999


Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~  157 (269)
                      ++++|||+||+|++|++++|+++.+|++|+++++++++.+.++ ++|+++++|+++. ++.+.+.+.+++ ++|++|||+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~  217 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGV  217 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECC
Confidence            9999999999999999999999999999999999999999999 9999999999887 899999999887 999999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhc-ceeeeeeeeccc---ccchHHHHHHHHHHHHCCCe
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSK-RLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~  233 (269)
                      |...+..++++++++|+++.+|...+     +....+...++.+ .+++.+.....+   +....+.++.+++++.+|++
T Consensus       218 g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  292 (325)
T 3jyn_A          218 GQDTWLTSLDSVAPRGLVVSFGNASG-----PVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKL  292 (325)
T ss_dssp             CGGGHHHHHTTEEEEEEEEECCCTTC-----CCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSS
T ss_pred             ChHHHHHHHHHhcCCCEEEEEecCCC-----CCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCe
Confidence            99999999999999999999987542     2223445556666 566655443222   34456677899999999999


Q ss_pred             eeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ++.++++|+++++++|++.+.+++..||+|+.+
T Consensus       293 ~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          293 KVDGIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             CCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             eCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            999889999999999999999999999999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.4e-42  Score=287.46  Aligned_cols=255  Identities=45%  Similarity=0.744  Sum_probs=222.5

Q ss_pred             cceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhh--hhcCCcchhHHHHHHHhhcCCCCCEE
Q 024337            6 GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYT--GILGMPGMTAYVGFYEVCSAKHGECV   83 (269)
Q Consensus         6 ~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~--a~l~~~~~~a~~~l~~~~~~~~~~~v   83 (269)
                      ++|+|++  ++++.|++||||++.|+|+||+++|++.++++ |++++.. ++  |++++++.|||+++.+.++++++++|
T Consensus        78 ~~G~V~~--~~v~~~~vGdrV~~~G~~aey~~v~~~~~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~v  153 (336)
T 4b7c_A           78 GVGKVLV--SKHPGFQAGDYVNGALGVQDYFIGEPKGFYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETV  153 (336)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEECCSBSEEEECCTTCEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEE
T ss_pred             eEEEEEe--cCCCCCCCCCEEeccCCceEEEEechHHeEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEE
Confidence            4667766  56899999999999999999999999999999 8875332 33  78999999999999888999999999


Q ss_pred             EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhH
Q 024337           84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL-KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTL  162 (269)
Q Consensus        84 lI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~-~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~  162 (269)
                      ||+|++|++|++++|+++..|++|+++++++++.+.+ + ++|++.++|+++. ++.+.+.+.+++++|++|||+|...+
T Consensus       154 lI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~  231 (336)
T 4b7c_A          154 VISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEIL  231 (336)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSCHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCCcchH
Confidence            9999999999999999999999999999999999999 6 9999999999887 89999998886699999999999999


Q ss_pred             hhhHhhhhcCCEEEEEeccccccC-CCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehcc
Q 024337          163 DAVLPNMKIRGRIAACGMISQYNL-DKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE  241 (269)
Q Consensus       163 ~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  241 (269)
                      ..++++++++|+++.+|....+.. .......++..++.+++++.++....+.....+.++.+++++++|++++.+..++
T Consensus       232 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  311 (336)
T 4b7c_A          232 DTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVE  311 (336)
T ss_dssp             HHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeec
Confidence            999999999999999987653211 0111234556788999999999877655556788999999999999999888889


Q ss_pred             ccccHHHHHHHHhcCCCcceEEEEe
Q 024337          242 GLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       242 ~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +|+++++|++.+.+++..||+|+++
T Consensus       312 ~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          312 GLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             CGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999999999999999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.2e-42  Score=288.63  Aligned_cols=253  Identities=24%  Similarity=0.298  Sum_probs=217.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      -|++|+|+++|++|+.|++||+|++.      |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.+++
T Consensus        65 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~  142 (346)
T 3fbg_A           65 FDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKA-PKNISAE-QAVSLPLTGITAYETLFDVFGI  142 (346)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEEC-CSSSCHH-HHTTSHHHHHHHHHHHHTTSCC
T ss_pred             CccEEEEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEEC-CCCCCHH-HhhhcchhHHHHHHHHHHhcCC
Confidence            57789999999999999999999985      89999999999999999 9985544 5788899999999999888888


Q ss_pred             C------CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           78 K------HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        78 ~------~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      +      ++++|||+||+|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+++  ++.+.+++..++++|
T Consensus       143 ~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~D  219 (346)
T 3fbg_A          143 SRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVD  219 (346)
T ss_dssp             CSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEE
T ss_pred             ccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCcc
Confidence            8      9999999998899999999999999999999999999999999 899999999875  778888887444999


Q ss_pred             EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-------ccchHHHHHH
Q 024337          152 VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-------YHLYPKFLEM  223 (269)
Q Consensus       152 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  223 (269)
                      ++|||+|+ ..+..++++++++|+++.++...        ...++..+..+++++.++.....       .....+.++.
T Consensus       220 vv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (346)
T 3fbg_A          220 YVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLED  291 (346)
T ss_dssp             EEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHH
T ss_pred             EEEECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHH
Confidence            99999998 56799999999999999886421        22344566778888887654321       1223577899


Q ss_pred             HHHHHHCCCeeeeeehcc---ccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          224 IIPHIKEGKLVYVEDMAE---GLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       224 ~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      +++++++|++++.+++++   +++++++|++.+.+++..||+|++++++
T Consensus       292 ~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~  340 (346)
T 3fbg_A          292 ITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEG  340 (346)
T ss_dssp             HHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC---
T ss_pred             HHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCc
Confidence            999999999999888776   8999999999999999999999998764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4.9e-42  Score=285.92  Aligned_cols=256  Identities=16%  Similarity=0.236  Sum_probs=216.5

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      .-|++|+|+++|++|++|++||+|+++   |+|+||+++|++.++++ |++++.. ++|++++.+.|||+++.+.+++++
T Consensus        67 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~v-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~  144 (340)
T 3gms_A           67 GYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPI-PDSIDDF-TAAQMYINPLTAWVTCTETLNLQR  144 (340)
T ss_dssp             CSCCEEEEEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTSSHHHHHHHHHHHTTSCCCT
T ss_pred             CcceEEEEEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHHeEEC-CCCCCHH-HHhhhcchHHHHHHHHHHhcccCC
Confidence            357899999999999999999999986   89999999999999999 9985544 578889999999999988899999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      +++|||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+++. ++.+.+.+.+++ ++|++|||+|
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g  222 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIG  222 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECCC
Confidence            999999999889999999999999999999999999999999 8999999999887 899999999887 9999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHh-hcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCC
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLV-SKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~  232 (269)
                      ......++++++++|+++.+|...+       ...++..+. ..++.+..+....+     .....+.++.+++++++|+
T Consensus       223 ~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  295 (340)
T 3gms_A          223 GPDGNELAFSLRPNGHFLTIGLLSG-------IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQ  295 (340)
T ss_dssp             HHHHHHHHHTEEEEEEEEECCCTTS-------CCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTS
T ss_pred             ChhHHHHHHHhcCCCEEEEEeecCC-------CCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCC
Confidence            9777778899999999999987542       122233333 23444444433221     2234578999999999999


Q ss_pred             eee-eeehccccccHHHHHHHHhcCC-CcceEEEEecCC
Q 024337          233 LVY-VEDMAEGLESAPAALIGLFSGQ-NVGKQVVAVAPE  269 (269)
Q Consensus       233 ~~~-~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~~~~  269 (269)
                      +++ .+.++|+++++++|++.+.+++ ..||+++++.++
T Consensus       296 l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~~  334 (340)
T 3gms_A          296 LRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYEG  334 (340)
T ss_dssp             SCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC--
T ss_pred             CccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence            987 4778999999999999999988 459999998763

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.3e-42  Score=285.68  Aligned_cols=252  Identities=24%  Similarity=0.368  Sum_probs=218.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      -|++|+|+++|++|+.|++||+|++.    |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.+++++
T Consensus        93 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~-P~~l~~~-~aA~l~~~~~ta~~al~~~~~~~~  170 (351)
T 1yb5_A           93 SDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKL-PEKLDFK-QGAAIGIPYFTAYRALIHSACVKA  170 (351)
T ss_dssp             SCEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTTHHHHHHHHHHHHTTSCCCT
T ss_pred             ceeEEEEEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCCCC
Confidence            47889999999999999999999986    89999999999999999 9985544 578899999999999977789999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      +++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESCH
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECCC
Confidence            999999999999999999999999999999999999999998 9999999999886 888888887766 8999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeeee
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYVE  237 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~  237 (269)
                      ...+..++++++++|+++.+|...       ....+...++.+++++.++..... +....+.++.+.+++.+|++++.+
T Consensus       249 ~~~~~~~~~~l~~~G~iv~~g~~~-------~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i  321 (351)
T 1yb5_A          249 NVNLSKDLSLLSHGGRVIVVGSRG-------TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVI  321 (351)
T ss_dssp             HHHHHHHHHHEEEEEEEEECCCCS-------CEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred             hHHHHHHHHhccCCCEEEEEecCC-------CCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCcc
Confidence            988899999999999999998632       122345567889999998865332 233456667788888999999999


Q ss_pred             ehccccccHHHHHHH-HhcCCCcceEEEEe
Q 024337          238 DMAEGLESAPAALIG-LFSGQNVGKQVVAV  266 (269)
Q Consensus       238 ~~~~~~~~~~~a~~~-~~~~~~~gkvvv~~  266 (269)
                      +++|+|+++++|++. +.+++..||+|+++
T Consensus       322 ~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          322 GSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             EEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999999999998 66667789999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=5.9e-42  Score=286.75  Aligned_cols=256  Identities=22%  Similarity=0.329  Sum_probs=219.6

Q ss_pred             cccceEEEEeccCC-CCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSEN-PEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v-~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      -|++|+|+++|++| +.|++||+|+++   |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.+++++
T Consensus        85 ~E~~G~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~i-P~~ls~~-~aa~l~~~~~tA~~al~~~~~~~~  162 (354)
T 2j8z_A           85 LEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPI-PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQA  162 (354)
T ss_dssp             SEEEEEEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEEC-CTTCCHH-HHTTSHHHHHHHHHHHTTTSCCCT
T ss_pred             eeeEEEEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEEC-CCCCCHH-HHHhccchHHHHHHHHHHhcCCCC
Confidence            47789999999999 999999999987   89999999999999999 9985544 477899999999999977889999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      +++|+|+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~G  240 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIG  240 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECCC
Confidence            999999999999999999999999999999999999999998 9999999999887 888888888876 8999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccch-HHHhhcceeeeeeeecccccc-----hHHHHHHHHHHHHCC-
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL-MYLVSKRLRMEGFIVLDHYHL-----YPKFLEMIIPHIKEG-  231 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g-  231 (269)
                      +..+..++++++++|+++.+|...+     .....+. ..++.+++++.++........     ..+.++.+++++++| 
T Consensus       241 ~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  315 (354)
T 2j8z_A          241 GSYWEKNVNCLALDGRWVLYGLMGG-----GDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEG  315 (354)
T ss_dssp             GGGHHHHHHHEEEEEEEEECCCTTC-----SCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC--
T ss_pred             chHHHHHHHhccCCCEEEEEeccCC-----CccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCC
Confidence            9889999999999999999987542     1123445 667889999999876543211     122345688899999 


Q ss_pred             --CeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          232 --KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       232 --~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                        ++++.++++|+|+++++|++.+.+++..||+|+++++
T Consensus       316 ~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          316 PQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             -CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             CccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence              9999999999999999999999988888999998753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=6e-42  Score=284.69  Aligned_cols=256  Identities=23%  Similarity=0.294  Sum_probs=221.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchh--hhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYY--TGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~--~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      -|++|+|+++|++|++|++||+|++.    |+|+||+++|++.++++ |++++.. +  +|++++++.|||+++.+.+++
T Consensus        66 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~  143 (333)
T 1wly_A           66 FEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKV  143 (333)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGGCEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ceeEEEEEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHHcEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCC
Confidence            47889999999999999999999773    89999999999999999 9986655 5  689999999999999777899


Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~  156 (269)
                      +++++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEEC
Confidence            99999999999999999999999999999999999999999998 8999989998876 888888887765 89999999


Q ss_pred             CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchH-HHhhcc--eeeeeeeeccc--ccchHHHHHHHHHHHHCC
Q 024337          157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLM-YLVSKR--LRMEGFIVLDH--YHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g  231 (269)
                      +|+..++.++++++++|+++.+|...+     .....++. .++.++  +++.|+....+  +....+.++.+++++.+|
T Consensus       222 ~g~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g  296 (333)
T 1wly_A          222 IGKDTLQKSLDCLRPRGMCAAYGHASG-----VADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAG  296 (333)
T ss_dssp             SCTTTHHHHHHTEEEEEEEEECCCTTC-----CCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHhhccCCEEEEEecCCC-----CcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCC
Confidence            999889999999999999999987432     11234445 677788  88888754211  122346789999999999


Q ss_pred             CeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       232 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++++.++++|+|+++++|++.+.+++..||+|+++++
T Consensus       297 ~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          297 VLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             SCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             CcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            9999998999999999999999998888999998864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=5.7e-42  Score=295.76  Aligned_cols=251  Identities=21%  Similarity=0.218  Sum_probs=218.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|+.|++||+|++                              .|+|+||++++.++++++ |++++.
T Consensus       123 hE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~~-P~~l~~  201 (456)
T 3krt_A          123 SDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPK-PDHLSW  201 (456)
T ss_dssp             SCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGGGEEEC-CTTSCH
T ss_pred             ceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEechHHeeEC-CCCCCH
Confidence            5678999999999999999999986                              289999999999999999 998554


Q ss_pred             chhhhhcCCcchhHHHHHHHh--hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           54 SYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      . ++|++++++.|||+++...  ++++++++|||+|++|++|++++|+|+.+|++|+++++++++.++++ ++|++.++|
T Consensus       202 ~-~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~lGa~~vi~  279 (456)
T 3krt_A          202 E-EAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEAIID  279 (456)
T ss_dssp             H-HHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCCEEEE
T ss_pred             H-HHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hhCCcEEEe
Confidence            4 4777888999999999654  78999999999999999999999999999999999999999999998 999999999


Q ss_pred             cCChhh-----------------HHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCcc
Q 024337          132 YKEEAD-----------------LNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH  193 (269)
Q Consensus       132 ~~~~~~-----------------~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  193 (269)
                      +.+. +                 +.+.+++.+++ ++|++|||+|+..+..++++++++|+++.+|...+     .....
T Consensus       280 ~~~~-d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~  353 (456)
T 3krt_A          280 RNAE-GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG-----YMHEY  353 (456)
T ss_dssp             TTTT-TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC-----SEEEE
T ss_pred             cCcC-cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC-----ccccc
Confidence            8764 3                 34778888876 99999999999999999999999999999987542     22234


Q ss_pred             chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +...++.+.+++.|+....     .+.+..+++++++|++++.++++|+|+++++|++.+.+++..||+||.+.+
T Consensus       354 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~~  423 (456)
T 3krt_A          354 DNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCLA  423 (456)
T ss_dssp             EHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEESSC
T ss_pred             CHHHHHhcCeEEEEeccCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence            5667788888998887654     344667899999999999999999999999999999999999999998754

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.4e-41  Score=281.97  Aligned_cols=242  Identities=20%  Similarity=0.255  Sum_probs=212.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|+.|++||+|+++                              |+|+||+++|++.++++ |++++.
T Consensus        79 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~i-P~~~~~  157 (359)
T 1h2b_A           79 HENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKL-PKDISR  157 (359)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEEC-CTTCCH
T ss_pred             cCceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEEC-CCCCCH
Confidence            47899999999999999999999753                              79999999999999999 998554


Q ss_pred             chhhh---hcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCce
Q 024337           54 SYYTG---ILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDE  128 (269)
Q Consensus        54 ~~~~a---~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~  128 (269)
                      . ++|   ++++++.|||+++.+. ++++++++|||+|+ |++|++++|+|+.+ |++|+++++++++.++++ ++|+++
T Consensus       158 ~-~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~  234 (359)
T 1h2b_A          158 E-KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADH  234 (359)
T ss_dssp             H-HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSE
T ss_pred             H-HHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCE
Confidence            4 456   7888899999999665 89999999999999 99999999999999 999999999999999999 999999


Q ss_pred             eEecCChhhHHHHHHHHCCC-CccEEEeCCCch---hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337          129 AFNYKEEADLNAALKRYFPE-GIDVYFENVGGK---TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR  204 (269)
Q Consensus       129 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  204 (269)
                      ++|+++  ++.+.+++.+++ ++|++|||+|+.   .+..++++  ++|+++.+|....     .  ..++..++.++++
T Consensus       235 vi~~~~--~~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~~~  303 (359)
T 1h2b_A          235 VVDARR--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSEVS  303 (359)
T ss_dssp             EEETTS--CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTTCE
T ss_pred             EEeccc--hHHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCCcE
Confidence            999886  367778888877 899999999985   88899988  9999999987432     1  3455677889999


Q ss_pred             eeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.++....     .+.++++++++.+|++++.+ ++|+|+++++|++.+.+++..||+|+++
T Consensus       304 i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          304 FEGSLVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             EEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EEEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            99876543     57799999999999999888 8999999999999999988889999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=3.9e-41  Score=281.25  Aligned_cols=264  Identities=69%  Similarity=1.188  Sum_probs=222.4

Q ss_pred             ccceEEEE--eccCCCCCCCCCeEEeccceeeEEEecCCc--eeecCCC-CCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            5 SGYGVAKV--LDSENPEFSKGDLVWGMTGWEEYSLITAPY--LFKIQHT-DVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         5 ~~~G~v~~--vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~--~~~~~p~-~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      |..|++.+  ||++++.|++||+|+++|+|+||++++++.  ++++ |+ ++++++++|++++++.|||+++.+.+++++
T Consensus        77 e~~G~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~  155 (345)
T 2j3h_A           77 PIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKE  155 (345)
T ss_dssp             BCEEEEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCT
T ss_pred             eeecceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCCC
Confidence            34677777  999999999999999999999999999876  9999 64 555665678999999999999977789999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +++|||+|++|++|++++|+++..|++|+++++++++.+.+++++|++.++|+.+..++.+.+++.+++++|++|||+|.
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~  235 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCH
Confidence            99999999999999999999999999999999999999998756999989998752256777777775689999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeeh
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM  239 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  239 (269)
                      ..+..++++++++|+++.+|.....+........+...++.+++++.++....+.....+.++++++++.+|++++.+..
T Consensus       236 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~  315 (345)
T 2j3h_A          236 KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV  315 (345)
T ss_dssp             HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred             HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccc
Confidence            88999999999999999998754321111112234456788899998876655444456779999999999999988877


Q ss_pred             ccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       240 ~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      +|+|+++++|++.+.+++..||+|+.++++
T Consensus       316 ~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             EESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             cCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence            899999999999999999899999998764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.4e-41  Score=283.41  Aligned_cols=249  Identities=27%  Similarity=0.350  Sum_probs=218.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEE-------e--------------------c---cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVW-------G--------------------M---TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~-------~--------------------~---g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|+.|++||+|+       +                    +   |+|+||+++|++.++++ |++++.
T Consensus        63 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~-P~~~~~  141 (343)
T 2eih_A           63 ADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPK-PKNLSF  141 (343)
T ss_dssp             SEEEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEEC-CTTSCH
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEEC-CCCCCH
Confidence            477899999999999999999998       5                    3   89999999999999999 998544


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      . ++|++++++.|||+++.+.++++++++|||+|++|++|++++|+++.+|++|+++++++++.+.++ ++|++.++|++
T Consensus       142 ~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~~  219 (343)
T 2eih_A          142 E-EAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYT  219 (343)
T ss_dssp             H-HHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETT
T ss_pred             H-HHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEcCC
Confidence            3 467799999999999976678999999999999999999999999999999999999999999998 89999899988


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          134 EEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      +. ++.+.+.+.+++ ++|++||++|...++.++++++++|+++.+|.....     ....++..++.+++++.++....
T Consensus       220 ~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~  293 (343)
T 2eih_A          220 HP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS  293 (343)
T ss_dssp             ST-THHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC
T ss_pred             cc-cHHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc
Confidence            76 888888888866 899999999988899999999999999999875421     11244556788999998875322


Q ss_pred             cccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                           .+.++++++++.+|++++.++++|+|+++++|++.+.+++..||+|+++
T Consensus       294 -----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          294 -----KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             -----GGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             -----HHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence                 5668999999999999998989999999999999999988889999975

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=4.1e-41  Score=280.42  Aligned_cols=246  Identities=21%  Similarity=0.279  Sum_probs=217.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|++|++||+|+.                               .|+|+||+++|++.++++ |++++
T Consensus        63 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~  141 (340)
T 3s2e_A           63 HEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLL-PDKVG  141 (340)
T ss_dssp             SEEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEEC-CTTSC
T ss_pred             CcceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEEC-CCCCC
Confidence            5788999999999999999999941                               289999999999999999 99855


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .. ++|++++++.|||+++ +..+++++++|||+|+ |++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+
T Consensus       142 ~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~~  217 (340)
T 3s2e_A          142 FV-EIAPILCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVNA  217 (340)
T ss_dssp             HH-HHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEET
T ss_pred             HH-HhhcccchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCCEEEeC
Confidence            44 5888999999999999 6679999999999997 99999999999999999999999999999999 9999999999


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      ++. ++.+.+++. .+++|++|||+|. ..++.++++++++|+++.+|...+      ....+...++.+++++.++...
T Consensus       218 ~~~-~~~~~~~~~-~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~  289 (340)
T 3s2e_A          218 RDT-DPAAWLQKE-IGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGSIVG  289 (340)
T ss_dssp             TTS-CHHHHHHHH-HSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEECCSC
T ss_pred             CCc-CHHHHHHHh-CCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEEecC
Confidence            887 888888873 3489999999986 889999999999999999987432      2334566788899999988765


Q ss_pred             ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      .     .+.++++++++++|++++.+ ..++|+++++|++.+.+++..||+|+++++
T Consensus       290 ~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          290 T-----RSDLQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             C-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             C-----HHHHHHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            4     67899999999999999865 467999999999999999999999999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=5.9e-41  Score=281.40  Aligned_cols=259  Identities=29%  Similarity=0.461  Sum_probs=222.0

Q ss_pred             cccceEEEEeccCCC-CCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENP-EFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~-~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      -|++|+|+++|++|+ .|++||+|+++  |+|+||+++|++.++++ |+.  .. ++|++++++.|||+++.+.++++++
T Consensus        89 ~E~~G~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~~-P~~--~~-~aaal~~~~~ta~~al~~~~~~~~g  164 (362)
T 2c0c_A           89 FEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPV-PSV--KP-EYLTLLVSGTTAYISLKELGGLSEG  164 (362)
T ss_dssp             SEEEEEEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGGCEEC-SSS--CH-HHHTTTTHHHHHHHHHHHHTCCCTT
T ss_pred             ceeEEEEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHHeEEC-CCC--ch-HhhcccchHHHHHHHHHHhcCCCCC
Confidence            478999999999999 99999999986  89999999999999999 875  33 6889999999999999888899999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      ++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++|+++. ++.+.+++.+++++|++|||+|..
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~  242 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGA  242 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHH
Confidence            99999999999999999999999999999999999999999 8999999999876 888888887755899999999998


Q ss_pred             hHhhhHhhhhcCCEEEEEeccccccCCC---CCC-ccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee
Q 024337          161 TLDAVLPNMKIRGRIAACGMISQYNLDK---PEG-VHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV  236 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  236 (269)
                      .+..++++++++|+++.+|.........   ... ......++.+++++.++....+.....+.++++++++++|++++.
T Consensus       243 ~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  322 (362)
T 2c0c_A          243 MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCE  322 (362)
T ss_dssp             HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCC
T ss_pred             HHHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEee
Confidence            8999999999999999998754321000   000 011356778899999987655444456789999999999999987


Q ss_pred             ee--------hccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          237 ED--------MAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       237 ~~--------~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +.        ..++|+++++|++.+.+++..||+|+.+++
T Consensus       323 ~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          323 VDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             EECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             eccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            54        457999999999999998888999998864

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=3.7e-41  Score=284.40  Aligned_cols=252  Identities=20%  Similarity=0.236  Sum_probs=216.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------------------------------------cc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------------------TG   31 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~   31 (269)
                      -|++|+|+++|++|+.|++||||++.                                                    |+
T Consensus        68 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~  147 (378)
T 3uko_A           68 HEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTST  147 (378)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCC
T ss_pred             ccceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcc
Confidence            46789999999999999999999742                                                    48


Q ss_pred             eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337           32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS  110 (269)
Q Consensus        32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~  110 (269)
                      |+||++++++.++++ |++++.. ++|.+++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus       148 ~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~  224 (378)
T 3uko_A          148 FSQYTVVHDVSVAKI-DPTAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGI  224 (378)
T ss_dssp             SBSEEEEEGGGEEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEE
T ss_pred             eEeEEEechhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999999999 9985554 578899999999999988899999999999998 9999999999999999 89999


Q ss_pred             eCCHHHHHHHHHHcCCceeEecC--ChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccC
Q 024337          111 AGSKDKVDLLKNKFGFDEAFNYK--EEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNL  186 (269)
Q Consensus       111 ~~s~~~~~~~~~~~g~~~~~~~~--~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~  186 (269)
                      +++++++++++ ++|+++++|+.  +. ++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|....   
T Consensus       225 ~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~---  299 (378)
T 3uko_A          225 DIDSKKYETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS---  299 (378)
T ss_dssp             CSCTTHHHHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT---
T ss_pred             cCCHHHHHHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCC---
Confidence            99999999999 99999999987  45 78999999987799999999998 7899999999996 99999987432   


Q ss_pred             CCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337          187 DKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV  264 (269)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  264 (269)
                       ..........++. +.++.++....+.  ..+.++.+++++.+|++++  .++++|+|+++++|++.+.+++.. |+|+
T Consensus       300 -~~~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi  374 (378)
T 3uko_A          300 -GQEISTRPFQLVT-GRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVL  374 (378)
T ss_dssp             -TCCEEECTHHHHT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEE
T ss_pred             -CCccccCHHHHhc-CcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEE
Confidence             1122233444444 7888887654332  3577899999999998874  578899999999999999988865 9999


Q ss_pred             EecC
Q 024337          265 AVAP  268 (269)
Q Consensus       265 ~~~~  268 (269)
                      ++++
T Consensus       375 ~~~~  378 (378)
T 3uko_A          375 DTSK  378 (378)
T ss_dssp             ETTC
T ss_pred             ecCC
Confidence            9874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.6e-41  Score=292.65  Aligned_cols=251  Identities=22%  Similarity=0.205  Sum_probs=217.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|++|++||+|++                              .|+|+||+++|+++++++ |++++.
T Consensus       115 hE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~~~i-P~~ls~  193 (447)
T 4a0s_A          115 SDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPK-PAHLTW  193 (447)
T ss_dssp             SCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGEEEC-CTTSCH
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHHcEEC-CCCCCH
Confidence            5678999999999999999999986                              389999999999999999 998554


Q ss_pred             chhhhhcCCcchhHHHHHHHh--hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           54 SYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      . ++|++++++.|||+++...  ++++++++|||+|++|++|++++|+|+.+|++|+++++++++.++++ ++|++.++|
T Consensus       194 ~-~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~  271 (447)
T 4a0s_A          194 E-EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVIN  271 (447)
T ss_dssp             H-HHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCCCEEE
T ss_pred             H-HHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEe
Confidence            4 5777888999999999643  88999999999999999999999999999999999999999999998 999999988


Q ss_pred             cCChhh------------------HHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCcc
Q 024337          132 YKEEAD------------------LNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH  193 (269)
Q Consensus       132 ~~~~~~------------------~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  193 (269)
                      +.+. +                  +.+.+++.++.++|++|||+|...+..++++++++|+++.+|...+     .....
T Consensus       272 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~  345 (447)
T 4a0s_A          272 RAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSG-----YLHTF  345 (447)
T ss_dssp             HHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTC-----SEEEE
T ss_pred             cccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCC-----ccccc
Confidence            7543 3                  2567777774489999999999889999999999999999987432     22234


Q ss_pred             chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +...++.+++++.++....     .+.+.++++++++|++++.++++|+|+++++|++.+.+++..||++|.+.+
T Consensus       346 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~~  415 (447)
T 4a0s_A          346 DNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMA  415 (447)
T ss_dssp             EHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESSC
T ss_pred             CHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEeCC
Confidence            5667788889998877654     455778999999999999999999999999999999999999999998754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.6e-41  Score=283.01  Aligned_cols=249  Identities=20%  Similarity=0.321  Sum_probs=216.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec--------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM--------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC   75 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~   75 (269)
                      -|++|+|+++|++|+.|++||+|+++        |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.+
T Consensus        69 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~  146 (343)
T 3gaz_A           69 MDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASK-PAALTMR-QASVLPLVFITAWEGLVDRA  146 (343)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHTTTT
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeC-CCCCCHH-HHHHhhhhHHHHHHHHHHhc
Confidence            57889999999999999999999876        79999999999999999 9985544 57888999999999997889


Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi  154 (269)
                      +++++++|||+||+|++|++++|+|+..|++|+++ .++++.++++ ++|++. +| +.. ++.+.+++.+++ ++|++|
T Consensus       147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~vi  221 (343)
T 3gaz_A          147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLVY  221 (343)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEEE
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEEE
Confidence            99999999999999999999999999999999999 7999999998 999988 77 555 788888888877 999999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc------ccchHHHHHHHHHHH
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH------YHLYPKFLEMIIPHI  228 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  228 (269)
                      ||+|+..+..++++++++|+++.++...         ..+...++.+++++.++.....      +....+.++.+++++
T Consensus       222 d~~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~  292 (343)
T 3gaz_A          222 DTLGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALV  292 (343)
T ss_dssp             ESSCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHH
Confidence            9999999999999999999999987642         2344567789999988754221      223457899999999


Q ss_pred             HCCCeeeeee-hccccccHHHHHHHHhcCCC----cceEEEEecC
Q 024337          229 KEGKLVYVED-MAEGLESAPAALIGLFSGQN----VGKQVVAVAP  268 (269)
Q Consensus       229 ~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~----~gkvvv~~~~  268 (269)
                      ++|++++.++ ++|+|+++++|++.+.+++.    .||+|++++.
T Consensus       293 ~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~  337 (343)
T 3gaz_A          293 QTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG  337 (343)
T ss_dssp             HTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred             HCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence            9999999988 79999999999999998764    6899998764

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.9e-41  Score=279.22  Aligned_cols=254  Identities=22%  Similarity=0.222  Sum_probs=218.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      -|++|+|+++|++|+.|++||+|...    |+|+||+++|++.++++ |++++.. ++|++++++.|||+++.+.+++++
T Consensus        63 ~E~~G~V~~vG~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~  140 (327)
T 1qor_A           63 TEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAIL-PAAISFE-QAAASFLKGLTVYYLLRKTYEIKP  140 (327)
T ss_dssp             SCEEEEEEEECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCT
T ss_pred             ceeEEEEEEECCCCCCCCCCCEEEECCCCCceeeeEEEecHHHcEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhCCCC
Confidence            57899999999999999999999644    89999999999999999 9985544 477899999999999976789999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      +++|+|+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+++ ++|++|||+|
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECCc
Confidence            999999999999999999999999999999999999999998 8999989998876 888888888766 8999999999


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhc-ceeeeeeeeccc---ccchHHHHHHHHHHHHCCCee
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSK-RLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      ...++.++++++++|+++.+|...+     .....+...++.+ ++++.+.....+   .....+.++++++++.+|+++
T Consensus       219 ~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  293 (327)
T 1qor_A          219 RDTWERSLDCLQRRGLMVSFGNSSG-----AVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIK  293 (327)
T ss_dssp             GGGHHHHHHTEEEEEEEEECCCTTC-----CCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSC
T ss_pred             hHHHHHHHHHhcCCCEEEEEecCCC-----CCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcc
Confidence            8899999999999999999987542     1123445556666 777765443222   112456789999999999999


Q ss_pred             eeee--hccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          235 YVED--MAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       235 ~~~~--~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +.++  ++|+|+++++|++.+.+++..||+++++
T Consensus       294 ~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          294 VDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             cccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9888  8999999999999999988889999864

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=6.2e-41  Score=280.39  Aligned_cols=247  Identities=21%  Similarity=0.282  Sum_probs=218.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|+.|++||||+..                               |+|+||++++++.++++ |++++
T Consensus        60 hE~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~i-P~~~~  138 (348)
T 4eez_A           60 HEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKV-PDGLD  138 (348)
T ss_dssp             SEEEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBC-CTTSC
T ss_pred             eeEEEEEEEECceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeec-CCCCC
Confidence            57789999999999999999999642                               78999999999999999 99855


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      .. ++|++++++.|+|+++ +.++++++++|||+|+ |++|.+++|+++.+ |++|+++++++++.++++ ++|+++++|
T Consensus       139 ~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga~~~i~  214 (348)
T 4eez_A          139 PI-EASSITCAGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGADVTIN  214 (348)
T ss_dssp             HH-HHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred             HH-HHhhcccceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCCeEEEe
Confidence            44 5889999999999999 5688999999999998 99999999999876 679999999999999999 999999999


Q ss_pred             cCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          132 YKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      +++. ++.+.+++.+++ ++|.+++++++ ..+..++++++++|+++.+|...      .....+...++.+++++.|+.
T Consensus       215 ~~~~-~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~------~~~~~~~~~~~~~~~~i~gs~  287 (348)
T 4eez_A          215 SGDV-NPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPN------TEMTLSVPTVVFDGVEVAGSL  287 (348)
T ss_dssp             C-CC-CHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCS------CEEEECHHHHHHSCCEEEECC
T ss_pred             CCCC-CHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccC------CCCccCHHHHHhCCeEEEEEe
Confidence            9997 999999999988 99999999987 78999999999999999998743      223456678889999999987


Q ss_pred             ecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ...     .+.++++++++++|++++.+ ++|+|+++++|++.+++++..||+||+|+.
T Consensus       288 ~~~-----~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          288 VGT-----RLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             SCC-----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             cCC-----HHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            654     56789999999999999765 689999999999999999999999999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2.3e-41  Score=283.90  Aligned_cols=251  Identities=16%  Similarity=0.203  Sum_probs=216.2

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhc
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCS   76 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~   76 (269)
                      .-|++|+|+++|++|+.|++||+|+++      |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.++
T Consensus        86 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~  163 (363)
T 4dvj_A           86 GYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRK-PKTLDWA-EAAALPLTSITAWEAFFDRLD  163 (363)
T ss_dssp             CCCEEEEEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSC
T ss_pred             cceeEEEEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhC
Confidence            357899999999999999999999975      79999999999999999 9985554 578888899999999988888


Q ss_pred             CC-----CCCEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCc
Q 024337           77 AK-----HGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        77 ~~-----~~~~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ++     ++++|||+||+|++|++++|+|+. .|++|+++++++++.++++ ++|+++++|+.+  ++.+.+++..++++
T Consensus       164 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~  240 (363)
T 4dvj_A          164 VNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAP  240 (363)
T ss_dssp             TTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCE
T ss_pred             cCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCc
Confidence            88     899999999889999999999998 5889999999999999999 999999999875  77888888754599


Q ss_pred             cEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-------ccchHHHHH
Q 024337          151 DVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-------YHLYPKFLE  222 (269)
Q Consensus       151 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  222 (269)
                      |++|||+|+ ..++.++++++++|+++.++..         ...+...+..+++++.++.....       .....+.++
T Consensus       241 Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---------~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~  311 (363)
T 4dvj_A          241 AFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---------SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLN  311 (363)
T ss_dssp             EEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---------SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHH
T ss_pred             eEEEECCCchhhHHHHHHHhcCCCEEEEECCC---------CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHH
Confidence            999999998 5889999999999999998542         12344567788888887654321       112257799


Q ss_pred             HHHHHHHCCCeeeeeehcc---ccccHHHHHHHHhcCCCcceEEEEec
Q 024337          223 MIIPHIKEGKLVYVEDMAE---GLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       223 ~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      .+++++++|++++.+..++   +++++++|++.+.+++..||+|+++.
T Consensus       312 ~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          312 DVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             HHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             HHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            9999999999999887655   99999999999999999999999875

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.7e-41  Score=283.60  Aligned_cols=259  Identities=24%  Similarity=0.342  Sum_probs=211.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      -|++|+|+++|++|++|++||+|+++   |+|+||++++.+.++++ |++++.. ++|++++++.|||+++.+.++++++
T Consensus        66 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g  143 (349)
T 4a27_A           66 FECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKI-PDDMSFS-EAAAFPMNFVTAYVMLFEVANLREG  143 (349)
T ss_dssp             SEEEEEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCCCTT
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHHeEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            56789999999999999999999987   89999999999999999 9985544 5788899999999999888999999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      ++|||+|++|++|++++|+|+.+| ++|++++ ++++.+.++  +|+++++| .+. ++.+.+++.+++++|++|||+|+
T Consensus       144 ~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g~  218 (349)
T 4a27_A          144 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLCG  218 (349)
T ss_dssp             CEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC-
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCCc
Confidence            999999999999999999999985 5999988 667777764  89999999 555 88999998887799999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCC-----------CCCccchHHHhhcceeeeeeeeccc------ccchHHHHH
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDK-----------PEGVHNLMYLVSKRLRMEGFIVLDH------YHLYPKFLE  222 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  222 (269)
                      ..+..++++++++|+++.+|.........           .....+...++.++.++.++....+      .....+.++
T Consensus       219 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~  298 (349)
T 4a27_A          219 DNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVE  298 (349)
T ss_dssp             ------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHH
T ss_pred             hhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHH
Confidence            77899999999999999998743210000           0112455677888999998876433      122367899


Q ss_pred             HHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          223 MIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       223 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      .+++++++|++++.++++|+++++++|++.+.+++..||+|++++++
T Consensus       299 ~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          299 KLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             HHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            99999999999999999999999999999999999999999998764

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=4.4e-41  Score=283.08  Aligned_cols=261  Identities=15%  Similarity=0.174  Sum_probs=214.1

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec-----------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHH
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM-----------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGF   71 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l   71 (269)
                      .-|++|+|+++|++|+.|++||+|++.           |+|+||++++.+.++++ |++++.. ++|++++++.|||+++
T Consensus        67 G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~~~~~~~ta~~~l  144 (371)
T 3gqv_A           67 GTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKI-PKGLSFE-QAAALPAGISTAGLAM  144 (371)
T ss_dssp             CSEEEEEEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEEC-CTTCCHH-HHHTSHHHHHHHHHHH
T ss_pred             ccccEEEEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEEC-CCCCCHH-HHhhhhhhHHHHHHHH
Confidence            357889999999999999999999876           79999999999999999 9985544 5778888899999999


Q ss_pred             HHh-hcC-----------CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHH
Q 024337           72 YEV-CSA-----------KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN  139 (269)
Q Consensus        72 ~~~-~~~-----------~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~  139 (269)
                      .+. .++           +++++|||+|++|++|++++|+|+.+|++|++++ ++++.++++ ++|+++++|+++. ++.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~~-~~~  221 (371)
T 3gqv_A          145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NLA  221 (371)
T ss_dssp             HHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTST-THH
T ss_pred             HhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEEECCCc-hHH
Confidence            776 553           8999999999999999999999999999999998 889999999 9999999999987 999


Q ss_pred             HHHHHHCCCCccEEEeCCCc-hhHhhhHhhh-hcCCEEEEEeccccccCCCCCCc---cchHHHhhcceeeeeeeeccc-
Q 024337          140 AALKRYFPEGIDVYFENVGG-KTLDAVLPNM-KIRGRIAACGMISQYNLDKPEGV---HNLMYLVSKRLRMEGFIVLDH-  213 (269)
Q Consensus       140 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-  213 (269)
                      +.+++.+++++|++|||+|+ ..+..+++++ +++|+++.+|.............   .....++.+++++.++..... 
T Consensus       222 ~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~  301 (371)
T 3gqv_A          222 QTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGS  301 (371)
T ss_dssp             HHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCC
T ss_pred             HHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeecccccccccccccccc
Confidence            99999998889999999998 7899999999 58999999986442100000011   112356778888887754332 


Q ss_pred             ---ccchHHHHHHHHHHHHCCCeeeeeeh--ccccccHHHHHHHHhcCCCcc-eEEEEecC
Q 024337          214 ---YHLYPKFLEMIIPHIKEGKLVYVEDM--AEGLESAPAALIGLFSGQNVG-KQVVAVAP  268 (269)
Q Consensus       214 ---~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~a~~~~~~~~~~g-kvvv~~~~  268 (269)
                         .....++++.+++++.+|++++.+..  .|+|+++++|++.+.+++..| |+|+.+++
T Consensus       302 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          302 EEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence               11234566789999999999987554  489999999999999998877 56666655

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2.3e-41  Score=283.55  Aligned_cols=253  Identities=21%  Similarity=0.319  Sum_probs=210.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      -|++|+|+++|++|+.|++||+|++.    |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.+++++
T Consensus        90 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~i-P~~l~~~-~Aa~l~~~~~ta~~~l~~~~~~~~  167 (357)
T 1zsy_A           90 NEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQV-PSDIPLQ-SAATLGVNPCTAYRMLMDFEQLQP  167 (357)
T ss_dssp             SCCEEEEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEE-CSSSCHH-HHHHTTSHHHHHHHHHHHSSCCCT
T ss_pred             ceEEEEEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEEC-CCCCCHH-HHhhhcccHHHHHHHHHHHhccCC
Confidence            57899999999999999999999976    89999999999999999 9985544 578888899999999977789999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC--CccEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE--GIDVY  153 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~--~~d~v  153 (269)
                      +++|||+|++|++|++++|+||.+|+++++++++.    ++.++++ ++|+++++|+++  ...+.+.+.+++  ++|++
T Consensus       168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~~~~~Dvv  244 (357)
T 1zsy_A          168 GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEE--LRRPEMKNFFKDMPQPRLA  244 (357)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHH--HHSGGGGGTTSSSCCCSEE
T ss_pred             CCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCc--chHHHHHHHHhCCCCceEE
Confidence            99999999999999999999999999988887553    2567888 999999998753  222345555544  59999


Q ss_pred             EeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHH
Q 024337          154 FENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHI  228 (269)
Q Consensus       154 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  228 (269)
                      |||+|+.....++++++++|+++.+|....     .....+...++.+++++.+++...+     +...++.++.+++++
T Consensus       245 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~  319 (357)
T 1zsy_A          245 LNCVGGKSSTELLRQLARGGTMVTYGGMAK-----QPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLI  319 (357)
T ss_dssp             EESSCHHHHHHHHTTSCTTCEEEECCCCTT-----CCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             EECCCcHHHHHHHHhhCCCCEEEEEecCCC-----CCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHH
Confidence            999998766789999999999999976432     1223445567789999999876432     122356789999999


Q ss_pred             HCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          229 KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       229 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .+|++++.+.++|+|+++++|++.+.+++..||+|+++
T Consensus       320 ~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          320 RRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            99999988878999999999999999888889999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.3e-40  Score=278.97  Aligned_cols=251  Identities=21%  Similarity=0.278  Sum_probs=216.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe----------------------------------------------------ccc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------------------MTG   31 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------------------~g~   31 (269)
                      -|++|+|+++|++|+.|++||+|++                                                    .|+
T Consensus        65 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~  144 (371)
T 1f8f_A           65 HEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSS  144 (371)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCC
T ss_pred             cccceEEEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCcc
Confidence            4788999999999999999999974                                                    178


Q ss_pred             eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337           32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS  110 (269)
Q Consensus        32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~  110 (269)
                      |+||++++++.++++ |++++.. ++|++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus       145 ~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~  221 (371)
T 1f8f_A          145 FATYALSRENNTVKV-TKDVPIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAV  221 (371)
T ss_dssp             SBSEEEEEGGGEEEE-CTTSCGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEE
T ss_pred             ccCeEEechhheEEC-CCCCCHH-HHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            999999999999999 9986554 578889999999999977789999999999996 9999999999999999 79999


Q ss_pred             eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCC
Q 024337          111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKP  189 (269)
Q Consensus       111 ~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  189 (269)
                      ++++++.++++ ++|+++++|+++. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|....    ..
T Consensus       222 ~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----~~  295 (371)
T 1f8f_A          222 DIVESRLELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----GT  295 (371)
T ss_dssp             ESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----TC
T ss_pred             CCCHHHHHHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCC----CC
Confidence            99999999998 9999999999886 88888988887799999999997 788999999999999999987532    11


Q ss_pred             CCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      ....++..++.+++++.++....+  ...+.++++++++++|++++  .+++ |+|+++++|++.+.+++. +|+|++++
T Consensus       296 ~~~~~~~~~~~~~~~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          296 TAQFDVNDLLLGGKTILGVVEGSG--SPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             CCCCCHHHHHHTTCEEEECSGGGS--CHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             ccccCHHHHHhCCCEEEEeCCCCC--chHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            223455677889999998765432  12577999999999999986  4667 999999999999988775 79999864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=4.7e-41  Score=277.85  Aligned_cols=241  Identities=27%  Similarity=0.288  Sum_probs=207.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCS   76 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~   76 (269)
                      -|++|+|+++|++|++|++||+|+++       |+|+||++++++.++++ |++++.. ++|++++++.|||+++ +.++
T Consensus        73 ~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~  149 (321)
T 3tqh_A           73 YDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQK-LEKLSFL-QAASLPTAGLTALQAL-NQAE  149 (321)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEEC-CTTSCHH-HHHHSHHHHHHHHHHH-HHTT
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccC-CCCCCHH-HHhhhhhHHHHHHHHH-HhcC
Confidence            46789999999999999999999875       78999999999999999 9885544 5788899999999999 7799


Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhh-HHHHHHHHCCCCccEEEe
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD-LNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~~~~~~d~vid  155 (269)
                      ++++++|||+||+|++|++++|+|+.+|++|++++ ++++.++++ ++|+++++|+++. + +.+.+     .++|++||
T Consensus       150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~-----~g~D~v~d  221 (321)
T 3tqh_A          150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAIS-----TPVDAVID  221 (321)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHCC-----SCEEEEEE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhhc-----cCCCEEEE
Confidence            99999999999889999999999999999999998 667788898 9999999999886 5 54433     37999999


Q ss_pred             CCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee
Q 024337          156 NVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       156 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  235 (269)
                      |+|+..+..++++++++|+++.++....        ......+..+++++.++...    ...+.++.+++++.+|++++
T Consensus       222 ~~g~~~~~~~~~~l~~~G~iv~~g~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~g~l~~  289 (321)
T 3tqh_A          222 LVGGDVGIQSIDCLKETGCIVSVPTITA--------GRVIEVAKQKHRRAFGLLKQ----FNIEELHYLGKLVSEDKLRI  289 (321)
T ss_dssp             SSCHHHHHHHGGGEEEEEEEEECCSTTH--------HHHHHHHHHTTCEEECCCCC----CCHHHHHHHHHHHHTTSSCC
T ss_pred             CCCcHHHHHHHHhccCCCEEEEeCCCCc--------hhhhhhhhhcceEEEEEecC----CCHHHHHHHHHHHHCCCccc
Confidence            9999777999999999999999876321        11223456778888774322    23678999999999999999


Q ss_pred             eeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      .++++|+|+++++|++.+.+++..||+|+++.
T Consensus       290 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          290 EISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             ccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            99999999999999999999999999999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=7.9e-41  Score=279.25  Aligned_cols=244  Identities=20%  Similarity=0.243  Sum_probs=214.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-----------------------------------ccceeeEEEec-CCceeecC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-----------------------------------MTGWEEYSLIT-APYLFKIQ   47 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~-~~~~~~~~   47 (269)
                      -|++|+|+++|++|++|++||+|++                                   .|+|+||+++| .+.++++ 
T Consensus        62 ~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~-  140 (345)
T 3jv7_A           62 HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPI-  140 (345)
T ss_dssp             SEEEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEEC-
T ss_pred             cccEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeC-
Confidence            5788999999999999999999986                                   27999999999 8899999 


Q ss_pred             CCCCCcchhhhhcCCcchhHHHHHHH-hhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcC
Q 024337           48 HTDVPLSYYTGILGMPGMTAYVGFYE-VCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFG  125 (269)
Q Consensus        48 p~~~~~~~~~a~l~~~~~~a~~~l~~-~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g  125 (269)
                      |+ ++.. ++|++++++.|||+++.+ ..+++++++|+|+|+ |++|++++|+|+.+ |++|+++++++++.++++ ++|
T Consensus       141 p~-~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lG  216 (345)
T 3jv7_A          141 GD-LDPV-AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVG  216 (345)
T ss_dssp             TT-CCHH-HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTT
T ss_pred             CC-CCHH-HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcC
Confidence            88 6554 578899999999999976 458999999999998 99999999999999 679999999999999999 999


Q ss_pred             CceeEecCChhhHHHHHHHHCCC-CccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcce
Q 024337          126 FDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRL  203 (269)
Q Consensus       126 ~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  203 (269)
                      +++++|+++  ++.+.+++.+++ ++|++|||+|+. .++.++++++++|+++.+|.....     ....++ .++.+++
T Consensus       217 a~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~-~~~~~~~  288 (345)
T 3jv7_A          217 ADAAVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-----HAKVGF-FMIPFGA  288 (345)
T ss_dssp             CSEEEECST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-----CEEEST-TTSCTTC
T ss_pred             CCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----CCCcCH-HHHhCCC
Confidence            999999876  788889888877 999999999984 899999999999999999875431     112232 5678889


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ++.++....     .+.++++++++++|++++. .++|+++++++|++.+.+++..||+|+.+
T Consensus       289 ~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          289 SVVTPYWGT-----RSELMEVVALARAGRLDIH-TETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             EEECCCSCC-----HHHHHHHHHHHHTTCCCCC-EEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             EEEEEecCC-----HHHHHHHHHHHHcCCCceE-EEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            998877654     5789999999999999984 47899999999999999999999999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=4e-40  Score=276.23  Aligned_cols=261  Identities=35%  Similarity=0.629  Sum_probs=222.5

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEec-cceeeEEEecCCceeecCCCCC---CcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWGM-TGWEEYSLITAPYLFKIQHTDV---PLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~~p~~~---~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      |++|+|++  ++|+.|++||+|++. |+|+||++++.+.++++ |+++   +.++++|++++++.|||+++.+.++++++
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~~G~~aey~~v~~~~~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~g  159 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAG  159 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEEEEESBSEEEEEGGGCEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCCTT
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEecCCCcEEEEEEchHHceec-CcccccCchhHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence            67888888  899999999999998 79999999999999999 9885   22546789999999999999878899999


Q ss_pred             --CEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           81 --ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        81 --~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                        ++|+|+|++|++|++++|+++..|+ +|+++++++++.+.+++++|++.++|+.+. ++.+.+.+.+++++|++|||+
T Consensus       160 ~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~d~vi~~~  238 (357)
T 2zb4_A          160 SNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNV  238 (357)
T ss_dssp             SCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESC
T ss_pred             CccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHHHHHHHhcCCCCCEEEECC
Confidence              9999999999999999999999999 999999999999998834999999998876 888888888766899999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCcc----chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCe
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH----NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  233 (269)
                      |+..+..++++++++|+++.+|.........+....    ....++.+++++.++....+.....+.++++++++.+|++
T Consensus       239 G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l  318 (357)
T 2zb4_A          239 GGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKL  318 (357)
T ss_dssp             CHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCC
Confidence            998899999999999999999875432111110000    0246778899999887654444457789999999999999


Q ss_pred             eeeeehccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      ++.+..+|+|+++++|++.+.+++..||+|++++++
T Consensus       319 ~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  354 (357)
T 2zb4_A          319 KIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE  354 (357)
T ss_dssp             CCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred             cCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence            988777899999999999999988889999998764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3e-41  Score=283.80  Aligned_cols=254  Identities=18%  Similarity=0.255  Sum_probs=212.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCC-----------CCCcchhhhhcCCcchhHH
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHT-----------DVPLSYYTGILGMPGMTAY   68 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~-----------~~~~~~~~a~l~~~~~~a~   68 (269)
                      -|++|+|+++|++|+.|++||+|++.    |+|+||++++++.++++ |+           +++.. ++|++++++.|||
T Consensus        78 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~~~~~~~~~~~~-~aa~l~~~~~ta~  155 (364)
T 1gu7_A           78 NEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL-PNPAQSKANGKPNGLTIN-QGATISVNPLTAY  155 (364)
T ss_dssp             SCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEE-CCHHHHHHTTCSCCCCHH-HHHTCTTHHHHHH
T ss_pred             ceeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEc-CCccccccccccCCCCHH-HHhhccccHHHHH
Confidence            47899999999999999999999976    89999999999999999 87           65444 5788888999999


Q ss_pred             HHHHHhhcCCCC-CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHcCCceeEecCC---hhhHHH
Q 024337           69 VGFYEVCSAKHG-ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK----VDLLKNKFGFDEAFNYKE---EADLNA  140 (269)
Q Consensus        69 ~~l~~~~~~~~~-~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~----~~~~~~~~g~~~~~~~~~---~~~~~~  140 (269)
                      +++.+.++++++ ++|||+|++|++|++++|+|+.+|++|++++++.++    .++++ ++|+++++|+++   . ++.+
T Consensus       156 ~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~-~~~~  233 (364)
T 1gu7_A          156 LMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSR-EFGP  233 (364)
T ss_dssp             HHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHCG-GGHH
T ss_pred             HHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccchH-HHHH
Confidence            999776789999 999999999999999999999999999999866554    67777 999999999875   4 7778


Q ss_pred             HHHHHC--CC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----
Q 024337          141 ALKRYF--PE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----  213 (269)
Q Consensus       141 ~i~~~~--~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  213 (269)
                      .+++.+  ++ ++|++|||+|+.....++++++++|+++.+|....     .....+...++.+++++.++....+    
T Consensus       234 ~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  308 (364)
T 1gu7_A          234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTSAGFWVTELLKNN  308 (364)
T ss_dssp             HHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEEEECCHHHHHTTC
T ss_pred             HHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCC-----CCcccCHHHHhhcCcEEEEEchhHhcccC
Confidence            888877  44 89999999998666688999999999999987432     1223445567789999998876432    


Q ss_pred             ccchHHHHHHHHHHHHCCCeeeeeehcccc---ccHHHHHHHHhcCCCcceEEEEe
Q 024337          214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGL---ESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +....+.++.+++++++|++++.+..++++   +++++|++.+.+++..||+|+++
T Consensus       309 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          309 KELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            112346789999999999999876667766   49999999999888889999975

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=3.8e-40  Score=274.34  Aligned_cols=246  Identities=23%  Similarity=0.303  Sum_probs=215.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|+.|++||+|++                               .|+|+||+++|++.++++ |++++
T Consensus        61 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~~~~  139 (339)
T 1rjw_A           61 HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKI-PDNLS  139 (339)
T ss_dssp             SCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEEC-CTTSC
T ss_pred             ccceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEEC-CCCCC
Confidence            4788999999999999999999974                               178999999999999999 99855


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .. ++|++++++.|||+++.+ .+++++++|||+|+ |++|++++|+|+.+|++|+++++++++.++++ ++|++.++|+
T Consensus       140 ~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d~  215 (339)
T 1rjw_A          140 FE-EAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNP  215 (339)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECT
T ss_pred             HH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEecC
Confidence            44 578899999999999955 58999999999999 88999999999999999999999999999998 8999999998


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      ++. ++.+.+++.+ +++|++|||+|. ..++.++++++++|+++.+|...+      ....++..++.+++++.++...
T Consensus       216 ~~~-~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~  287 (339)
T 1rjw_A          216 LKE-DAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVG  287 (339)
T ss_dssp             TTS-CHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSC
T ss_pred             CCc-cHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC------CCccCHHHHHhCCcEEEEeccC
Confidence            876 7888887766 589999999997 889999999999999999987432      1234556778899999887654


Q ss_pred             ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      .     .+.++++++++.+|.+++.+ ++|+|+++++|++.+.+++..||+|+++++
T Consensus       288 ~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          288 T-----RKDLQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             C-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             C-----HHHHHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            3     56789999999999998864 689999999999999998888999999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.1e-40  Score=280.56  Aligned_cols=248  Identities=20%  Similarity=0.241  Sum_probs=214.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|+.|++||+|++                              .|+|+||++++.+.++++ |++  +
T Consensus        81 ~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~~--~  157 (370)
T 4ej6_A           81 HEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEI-PLT--L  157 (370)
T ss_dssp             CSEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEE-CTT--S
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEEC-CCC--C
Confidence            5789999999999999999999986                              289999999999999999 988  4


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +++.|+++.++.+||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|+++++|+
T Consensus       158 ~~~~aal~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~  234 (370)
T 4ej6_A          158 DPVHGAFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDP  234 (370)
T ss_dssp             CTTGGGGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECT
T ss_pred             CHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECC
Confidence            545556888999999999 7789999999999998 9999999999999999 9999999999999999 9999999999


Q ss_pred             CChhhHHHHHHH---HCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeee
Q 024337          133 KEEADLNAALKR---YFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF  208 (269)
Q Consensus       133 ~~~~~~~~~i~~---~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (269)
                      ++. ++.+.+++   .+++++|++|||+|. ..+..++++++++|+++.+|....    ......++..++.+++++.|+
T Consensus       235 ~~~-~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~----~~~~~~~~~~~~~~~~~i~g~  309 (370)
T 4ej6_A          235 SAG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQ----GEKVEIEPFDILFRELRVLGS  309 (370)
T ss_dssp             TSS-CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCT----TCCCCCCHHHHHHTTCEEEEC
T ss_pred             CCc-CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCC----CCccccCHHHHHhCCcEEEEe
Confidence            887 88888888   666799999999996 789999999999999999987542    123345677889999999998


Q ss_pred             eecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCC-CcceEEEEecC
Q 024337          209 IVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQ-NVGKQVVAVAP  268 (269)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~~~  268 (269)
                      ....      ..++.+++++++|+++  +.++++|+|+++++|++.+.+++ ..+|+++++++
T Consensus       310 ~~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          310 FINP------FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             CSCT------TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             ccCh------HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            7543      3378899999999985  45788999999999999998876 55788887754

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=5.8e-40  Score=276.71  Aligned_cols=248  Identities=19%  Similarity=0.232  Sum_probs=210.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++|+.|++||+|++.                                                   |+|
T Consensus        68 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~  147 (373)
T 1p0f_A           68 HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTF  147 (373)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCS
T ss_pred             cCceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccc
Confidence            57899999999999999999999752                                                   789


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+++|++.++++ |++++.  ++|++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       148 aey~~v~~~~~~~i-P~~l~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~  223 (373)
T 1p0f_A          148 TEYTVVADIAVAKI-DPKAPL--ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVG  223 (373)
T ss_dssp             BSEEEEETTSEEEE-CTTCCG--GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             eeEEEEchhhEEEC-CCCCCh--hhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            99999999999999 998544  467788899999999977889999999999997 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCC--hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD  187 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  187 (269)
                      ++++++++++ ++|+++++|+++  . ++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|....    
T Consensus       224 ~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----  297 (373)
T 1p0f_A          224 THKDKFPKAI-ELGATECLNPKDYDK-PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----  297 (373)
T ss_dssp             SCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----
T ss_pred             CCHHHHHHHH-HcCCcEEEecccccc-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCC----
Confidence            9999999999 999999999874  3 68888888887799999999997 7899999999999 99999987432    


Q ss_pred             CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      ......+...++.++ ++.++....+.   .+.++++++++.+|+++  +.++++|+|+++++|++.+.+++. +|++++
T Consensus       298 ~~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~  372 (373)
T 1p0f_A          298 NERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMI  372 (373)
T ss_dssp             TCCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEE
T ss_pred             CCccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEe
Confidence            111223445566677 88887653321   25688899999999987  456789999999999999988774 799987


Q ss_pred             e
Q 024337          266 V  266 (269)
Q Consensus       266 ~  266 (269)
                      +
T Consensus       373 ~  373 (373)
T 1p0f_A          373 Y  373 (373)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=7.2e-42  Score=285.88  Aligned_cols=251  Identities=18%  Similarity=0.214  Sum_probs=213.5

Q ss_pred             cccceEEEEeccCC-CCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhc
Q 024337            4 ISGYGVAKVLDSEN-PEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCS   76 (269)
Q Consensus         4 i~~~G~v~~vg~~v-~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~   76 (269)
                      -|++|+|+++|++| ++|++||+|++.      |+|+||+++|++.++++ |++++.. ++|++++.+.|||+++ +.++
T Consensus        85 ~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~-~~~~  161 (349)
T 3pi7_A           85 FEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPL-LDTVRDE-DGAAMIVNPLTAIAMF-DIVK  161 (349)
T ss_dssp             SEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEEC-CTTCCC---GGGSSHHHHHHHHHH-HHHH
T ss_pred             ceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEEC-CCCCCHH-HHhhccccHHHHHHHH-HHHh
Confidence            57789999999999 999999999975      89999999999999999 9986554 5888899999999766 5566


Q ss_pred             CCCC-CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337           77 AKHG-ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF  154 (269)
Q Consensus        77 ~~~~-~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi  154 (269)
                       +++ ++++|+||+|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+++. ++.+.+++.+++ ++|++|
T Consensus       162 -~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          162 -QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             -HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEEETTST-THHHHHHHHHHHHCCCEEE
T ss_pred             -hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHHHHHHhcCCCCcEEE
Confidence             666 79999999999999999999999999999999999999999 9999999999887 899999988876 899999


Q ss_pred             eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccch-HHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHH
Q 024337          155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL-MYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIK  229 (269)
Q Consensus       155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  229 (269)
                      ||+|+..+..++++++++|+++.+|....     .....+. ..++.+++++.+++...+    +....+.++.++++++
T Consensus       239 d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~  313 (349)
T 3pi7_A          239 DAVTGPLASAIFNAMPKRARWIIYGRLDP-----DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFS  313 (349)
T ss_dssp             ESSCHHHHHHHHHHSCTTCEEEECCCSCC-----SCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTT
T ss_pred             ECCCChhHHHHHhhhcCCCEEEEEeccCC-----CCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHH
Confidence            99999888999999999999999986443     1222444 678889999999877553    1223577889999999


Q ss_pred             CCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          230 EGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      +|++++.++++|+|+++++|++.+. ++..||+|+++
T Consensus       314 ~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          314 DGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             TSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             cCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            9999999999999999999999544 45679999975

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.1e-40  Score=276.62  Aligned_cols=246  Identities=17%  Similarity=0.178  Sum_probs=210.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|+.|++||||++                               .|+|+||+++|++.++++ |+++ 
T Consensus        69 ~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~~l-  146 (356)
T 1pl8_A           69 HEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKL-PDNV-  146 (356)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTTS-
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEEC-cCCC-
Confidence            4788999999999999999999985                               279999999999999999 9984 


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                       +++.|++..++.|||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|+++++|
T Consensus       147 -~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~  222 (356)
T 1pl8_A          147 -TFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQ  222 (356)
T ss_dssp             -CHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred             -CHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEc
Confidence             444444557889999999 6789999999999997 9999999999999999 9999999999999999 999999999


Q ss_pred             cC---ChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeee
Q 024337          132 YK---EEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG  207 (269)
Q Consensus       132 ~~---~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (269)
                      ++   .. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|....      ....++..++.+++++.+
T Consensus       223 ~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g  295 (356)
T 1pl8_A          223 ISKESPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKG  295 (356)
T ss_dssp             CSSCCHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEE
T ss_pred             Ccccccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHhcceEEEE
Confidence            88   34 77778877765689999999997 578999999999999999986321      223455678889999988


Q ss_pred             eeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          208 FIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      +...      .+.++++++++.+|+++  +.++++|+|+++++|++.+.++ ..+|+|++++++
T Consensus       296 ~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~  352 (356)
T 1pl8_A          296 VFRY------CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS  352 (356)
T ss_dssp             CCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred             eccc------HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence            7543      23578899999999865  5677899999999999999988 789999998754

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=8.9e-40  Score=275.67  Aligned_cols=250  Identities=20%  Similarity=0.247  Sum_probs=212.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++|++|++||||++.                                                   |+|
T Consensus        67 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~  146 (374)
T 2jhf_A           67 HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTF  146 (374)
T ss_dssp             CSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCS
T ss_pred             cCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccC
Confidence            57899999999999999999999752                                                   789


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+++|++.++++ |++++.. ++|++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       147 aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~  223 (374)
T 2jhf_A          147 SQYTVVDEISVAKI-DAASPLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVD  223 (374)
T ss_dssp             BSEEEEEGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             eeEEEEchHHeEEC-CCCCCHH-HhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence            99999999999999 9985544 578889999999999977789999999999996 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCC--hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD  187 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  187 (269)
                      +++++.++++ ++|+++++|+++  . ++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|....    
T Consensus       224 ~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----  297 (374)
T 2jhf_A          224 INKDKFAKAK-EVGATECVNPQDYKK-PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----  297 (374)
T ss_dssp             SCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----
T ss_pred             CCHHHHHHHH-HhCCceEecccccch-hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCC----
Confidence            9999999998 999999999874  3 68888888877789999999997 7889999999999 99999986432    


Q ss_pred             CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      ......++..++.++ ++.++....+  ...+.++++++++.+|++++  .++++|+|+++++|++.+.+++. +|++++
T Consensus       298 ~~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~  373 (374)
T 2jhf_A          298 SQNLSMNPMLLLSGR-TWKGAIFGGF--KSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILT  373 (374)
T ss_dssp             TCCEEECTHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEE
T ss_pred             CCccccCHHHHhcCC-eEEEeccCCC--ChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEe
Confidence            111233445566677 8888765432  12567899999999999874  56789999999999999988774 699987


Q ss_pred             e
Q 024337          266 V  266 (269)
Q Consensus       266 ~  266 (269)
                      +
T Consensus       374 ~  374 (374)
T 2jhf_A          374 F  374 (374)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=6.6e-40  Score=276.46  Aligned_cols=250  Identities=21%  Similarity=0.266  Sum_probs=212.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++|+.|++||||++.                                                   |+|
T Consensus        66 hE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~  145 (373)
T 2fzw_A           66 HLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTF  145 (373)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred             ccccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccc
Confidence            47889999999999999999999752                                                   789


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+++|++.++++ |++++.. ++|++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       146 aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~  222 (373)
T 2fzw_A          146 SEYTVVADISVAKI-DPLAPLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVD  222 (373)
T ss_dssp             BSEEEEEGGGEEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             eeEEEEchhheEEC-CCCCCHH-HHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence            99999999999999 9985544 578889999999999977889999999999997 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCC--hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD  187 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  187 (269)
                      +++++.++++ ++|+++++|+++  . ++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|....    
T Consensus       223 ~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----  296 (373)
T 2fzw_A          223 INKDKFARAK-EFGATECINPQDFSK-PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----  296 (373)
T ss_dssp             SCGGGHHHHH-HHTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----
T ss_pred             CCHHHHHHHH-HcCCceEeccccccc-cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCC----
Confidence            9999999999 999999999874  3 68888888887799999999997 7889999999999 99999987432    


Q ss_pred             CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                      ......++..++.++ ++.++....+  ...+.++.+++++.+|+++  +.++++|+|+++++|++.+.+++. +|++++
T Consensus       297 ~~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~  372 (373)
T 2fzw_A          297 GEEIATRPFQLVTGR-TWKGTAFGGW--KSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVK  372 (373)
T ss_dssp             TCCEEECTHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEE
T ss_pred             CceeeeCHHHHhcCC-EEEEeccCCC--CcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEe
Confidence            111223445566677 8888765432  1356799999999999987  456789999999999999988775 699987


Q ss_pred             e
Q 024337          266 V  266 (269)
Q Consensus       266 ~  266 (269)
                      +
T Consensus       373 ~  373 (373)
T 2fzw_A          373 I  373 (373)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.5e-40  Score=276.53  Aligned_cols=249  Identities=18%  Similarity=0.225  Sum_probs=212.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++|+.|++||||++.                                                   |+|
T Consensus        68 hE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~  147 (374)
T 1cdo_A           68 HEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTF  147 (374)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCS
T ss_pred             ccceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccc
Confidence            57899999999999999999999752                                                   789


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA  111 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~  111 (269)
                      +||+++|++.++++ |++++.. ++|++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       148 aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~  224 (374)
T 1cdo_A          148 SQYTVVNQIAVAKI-DPSAPLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVD  224 (374)
T ss_dssp             BSEEEEEGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             eeEEEEchhheEEC-CCCCCHH-HHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Confidence            99999999999999 9985544 578889999999999877789999999999996 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHcCCceeEecCC--hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337          112 GSKDKVDLLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD  187 (269)
Q Consensus       112 ~s~~~~~~~~~~~g~~~~~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  187 (269)
                      +++++.++++ ++|+++++|+++  . ++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|....    
T Consensus       225 ~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----  298 (374)
T 1cdo_A          225 LNPDKFEKAK-VFGATDFVNPNDHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL----  298 (374)
T ss_dssp             SCGGGHHHHH-HTTCCEEECGGGCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS----
T ss_pred             CCHHHHHHHH-HhCCceEEeccccch-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC----
Confidence            9999999999 999999998874  3 67888888776689999999997 7889999999999 99999987432    


Q ss_pred             CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337          188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVA  265 (269)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  265 (269)
                       .....++..++.++ ++.++....+  ...+.++.+++++.+|+++  +.+.++|+|+++++|++.+.+++. +|++++
T Consensus       299 -~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~  373 (374)
T 1cdo_A          299 -HDVATRPIQLIAGR-TWKGSMFGGF--KGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLS  373 (374)
T ss_dssp             -SCEEECHHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEE
T ss_pred             -CCcccCHHHHhcCC-eEEEEecCCC--CcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEe
Confidence             11224445666677 8888765432  1356789999999999987  456789999999999999998875 699987


Q ss_pred             e
Q 024337          266 V  266 (269)
Q Consensus       266 ~  266 (269)
                      +
T Consensus       374 ~  374 (374)
T 1cdo_A          374 L  374 (374)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=6.9e-40  Score=276.53  Aligned_cols=248  Identities=16%  Similarity=0.215  Sum_probs=211.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------------------------------
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------------------------------   29 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------------------------------   29 (269)
                      -|++|+|+++|++|+.|++||||++.                                                      
T Consensus        67 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~  146 (376)
T 1e3i_A           67 HECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMG  146 (376)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTT
T ss_pred             ccccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccC
Confidence            47889999999999999999999752                                                      


Q ss_pred             -cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EE
Q 024337           30 -TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YV  107 (269)
Q Consensus        30 -g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V  107 (269)
                       |+|+||+++|++.++++ |++++.. ++|++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|
T Consensus       147 ~G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V  223 (376)
T 1e3i_A          147 VSSFSQYTVVSEANLARV-DDEANLE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRI  223 (376)
T ss_dssp             TCCSBSEEEEEGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred             CccceeEEEeccccEEEC-CCCCCHH-HhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeE
Confidence             78999999999999999 9985544 578888999999999977789999999999997 9999999999999999 89


Q ss_pred             EEEeCCHHHHHHHHHHcCCceeEecCC--hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEecccc
Q 024337          108 VGSAGSKDKVDLLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQ  183 (269)
Q Consensus       108 ~~~~~s~~~~~~~~~~~g~~~~~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~  183 (269)
                      +++++++++.++++ ++|+++++|+++  . ++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|... 
T Consensus       224 i~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~-  300 (376)
T 1e3i_A          224 IAIDINGEKFPKAK-ALGATDCLNPRELDK-PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV-  300 (376)
T ss_dssp             EEECSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS-
T ss_pred             EEEcCCHHHHHHHH-HhCCcEEEccccccc-hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC-
Confidence            99999999999998 999999999874  3 68888888776689999999997 7889999999999 9999998732 


Q ss_pred             ccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcce
Q 024337          184 YNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGK  261 (269)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk  261 (269)
                           .....++..++.++ ++.++....+  ...+.++.+++++.+|+++  +.++++|+|+++++|++.+.+++ .+|
T Consensus       301 -----~~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~K  371 (376)
T 1e3i_A          301 -----DEMTIPTVDVILGR-SINGTFFGGW--KSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIR  371 (376)
T ss_dssp             -----SEEEEEHHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSE
T ss_pred             -----CccccCHHHhhccC-eEEEEecCCC--CcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cce
Confidence                 12234555666777 8888764332  1356789999999999987  45678999999999999998877 479


Q ss_pred             EEEEe
Q 024337          262 QVVAV  266 (269)
Q Consensus       262 vvv~~  266 (269)
                      +++++
T Consensus       372 vvi~~  376 (376)
T 1e3i_A          372 TILTF  376 (376)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.2e-40  Score=276.76  Aligned_cols=241  Identities=16%  Similarity=0.190  Sum_probs=207.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------------------------cceeeEEEecCCce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------TGWEEYSLITAPYL   43 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~~~   43 (269)
                      -|++|+|+++|++|++|++||+|++.                                        |+|+||+++|++.+
T Consensus        64 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  143 (348)
T 3two_A           64 HEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYV  143 (348)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGC
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhE
Confidence            57889999999999999999999752                                        89999999999999


Q ss_pred             eecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 024337           44 FKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK  123 (269)
Q Consensus        44 ~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~  123 (269)
                      +++ |++++.. ++|++++++.|||+++. ..+++++++|||+|+ |++|++++|+|+.+|++|+++++++++.++++ +
T Consensus       144 ~~i-P~~~~~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~  218 (348)
T 3two_A          144 ISV-DKNAPLE-KVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-S  218 (348)
T ss_dssp             EEC-CTTSCHH-HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-H
T ss_pred             EEC-CCCCCHH-HhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-h
Confidence            999 9985554 58889999999999995 469999999999998 99999999999999999999999999999999 9


Q ss_pred             cCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHh-hc
Q 024337          124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLV-SK  201 (269)
Q Consensus       124 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~  201 (269)
                      +|+++++ .+.. .    +.    .++|++|||+|+. .+..++++++++|+++.+|....    ......+...++ .+
T Consensus       219 lGa~~v~-~~~~-~----~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~~~~~~~~~~~~~  284 (348)
T 3two_A          219 MGVKHFY-TDPK-Q----CK----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPV----EVAPVLSVFDFIHLG  284 (348)
T ss_dssp             TTCSEEE-SSGG-G----CC----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCG----GGCCEEEHHHHHHTC
T ss_pred             cCCCeec-CCHH-H----Hh----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCC----CCcccCCHHHHHhhC
Confidence            9999888 3221 1    11    1799999999985 99999999999999999987541    011114556666 89


Q ss_pred             ceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337          202 RLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE  269 (269)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~  269 (269)
                      ++++.++....     .+.++.+++++++|++++.+ ++|+|+++++|++.+.+++..||+|++++++
T Consensus       285 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          285 NRKVYGSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             SCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             CeEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            99999987654     56789999999999999865 6899999999999999999999999999764

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=7.1e-40  Score=273.75  Aligned_cols=253  Identities=21%  Similarity=0.190  Sum_probs=211.0

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|+.+++||+|++.                              |+|+||+++|+++++++ |++++ 
T Consensus        59 ~E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~l~-  136 (346)
T 4a2c_A           59 HEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFAL-PTDMP-  136 (346)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEEC-CTTSC-
T ss_pred             EEEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEEC-CCCCC-
Confidence            57889999999999999999999753                              78999999999999999 99854 


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                       ++.|++..++.++++++ ...+++++++|+|+|+ |++|++++|+|+.+|+ .+++++++++++++++ ++|+++++|+
T Consensus       137 -~~~aa~l~~~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~  212 (346)
T 4a2c_A          137 -IEDGAFIEPITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNS  212 (346)
T ss_dssp             -GGGGGGHHHHHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEET
T ss_pred             -HHHHHhchHHHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeC
Confidence             44444444555555555 6789999999999998 9999999999999999 5678888999999999 9999999999


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      ++. +..+.++..+++ ++|+++||+|. ..++.++++++++|+++.+|.....   ......++..++.+++++.|++.
T Consensus       213 ~~~-~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~k~~~i~G~~~  288 (346)
T 4a2c_A          213 SEM-SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQD---LHLTSATFGKILRKELTVIGSWM  288 (346)
T ss_dssp             TTS-CHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSC---EEECHHHHHHHHHHTCEEEECCT
T ss_pred             CCC-CHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCC---ccccccCHHHHhhceeEEEEEec
Confidence            987 888888888876 89999999996 7889999999999999999875421   01122345667889999999876


Q ss_pred             cccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ........+.++.+++++++|+++  +.++++|+|+++++|++.+.+++..||+|+.+
T Consensus       289 ~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          289 NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             TCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             cccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            443334457789999999999875  45788999999999999999999999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-39  Score=271.85  Aligned_cols=249  Identities=21%  Similarity=0.267  Sum_probs=215.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|+.|++||+|++                               .|+|+||+++|++.++++ |++++
T Consensus        66 ~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~  144 (347)
T 2hcy_A           66 HEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHI-PQGTD  144 (347)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEE-CTTCC
T ss_pred             ccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEEC-CCCCC
Confidence            4678999999999999999999974                               278999999999999999 99855


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      .. ++|++++++.|||+++.+ .+++++++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+
T Consensus       145 ~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d~  221 (347)
T 2hcy_A          145 LA-QVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDF  221 (347)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCCEEEET
T ss_pred             HH-HHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCceEEec
Confidence            44 478899999999999954 58999999999999999999999999999999999999999999998 8999888997


Q ss_pred             C-ChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337          133 K-EEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~-~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      . .. ++.+.+++.+++++|++||++|. ..++.+++.|+++|+++.+|...+     .....++..++.+++++.++..
T Consensus       222 ~~~~-~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~  295 (347)
T 2hcy_A          222 TKEK-DIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAG-----AKCCSDVFNQVVKSISIVGSYV  295 (347)
T ss_dssp             TTCS-CHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTT-----CEEEEEHHHHHHTTCEEEECCC
T ss_pred             CccH-hHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCC-----CCCCCCHHHHhhCCcEEEEccC
Confidence            7 34 77778877765589999999997 889999999999999999987432     1223456677889999998765


Q ss_pred             cccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ..     .+.++++++++++|++++.+ ++|+|+++++|++.+.+++..||+|+++++
T Consensus       296 ~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  347 (347)
T 2hcy_A          296 GN-----RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTSK  347 (347)
T ss_dssp             CC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred             CC-----HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence            43     56789999999999998864 589999999999999998888999998863

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.9e-40  Score=276.64  Aligned_cols=246  Identities=20%  Similarity=0.222  Sum_probs=215.0

Q ss_pred             cccceEEEEeccCCC------CCCCCCeEEe---------------------------------------ccceeeEEEe
Q 024337            4 ISGYGVAKVLDSENP------EFSKGDLVWG---------------------------------------MTGWEEYSLI   38 (269)
Q Consensus         4 i~~~G~v~~vg~~v~------~~~~Gd~V~~---------------------------------------~g~~~~~~~v   38 (269)
                      -|++|+|+++| +|+      .|++||+|++                                       .|+|+||+++
T Consensus        77 hE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v  155 (380)
T 1vj0_A           77 HEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVL  155 (380)
T ss_dssp             CEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEE
T ss_pred             cCcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEE
Confidence            57889999999 999      9999999986                                       2789999999


Q ss_pred             -cCCceeecCCCCCCcchh-hhhcCCcchhHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH
Q 024337           39 -TAPYLFKIQHTDVPLSYY-TGILGMPGMTAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK  114 (269)
Q Consensus        39 -~~~~~~~~~p~~~~~~~~-~a~l~~~~~~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~  114 (269)
                       |++.++++ |++  ++++ .|++.+++.|||+++ +.++ ++++++|||+| +|++|++++|+|+.+|+ +|+++++++
T Consensus       156 ~~~~~~~~i-P~~--l~~~~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~  230 (380)
T 1vj0_A          156 DPETDVLKV-SEK--DDLDVLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSP  230 (380)
T ss_dssp             CTTCCEEEE-CTT--SCHHHHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred             cccceEEEC-CCC--CChHHhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCH
Confidence             99999999 998  4555 777777999999999 5678 99999999999 69999999999999994 999999999


Q ss_pred             HHHHHHHHHcCCceeEecC---ChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCC
Q 024337          115 DKVDLLKNKFGFDEAFNYK---EEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKP  189 (269)
Q Consensus       115 ~~~~~~~~~~g~~~~~~~~---~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  189 (269)
                      ++.++++ ++|+++++|++   +. ++.+.+++.+++ ++|++|||+|. ..+..++++++++|+++.+|....    ..
T Consensus       231 ~~~~~~~-~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~----~~  304 (380)
T 1vj0_A          231 NRLKLAE-EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP----QD  304 (380)
T ss_dssp             HHHHHHH-HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC----CC
T ss_pred             HHHHHHH-HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC----CC
Confidence            9999999 99999999987   55 788889998887 89999999997 689999999999999999987430    00


Q ss_pred             CCccchHH-HhhcceeeeeeeecccccchHHHHHHHHHHHHC--CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          190 EGVHNLMY-LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKE--GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       190 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ....++.. ++.+++++.++....     .+.++++++++++  |++++.++++|+|+++++|++.+.+++.. |+|+++
T Consensus       305 ~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          305 PVPFKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             CEEECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             CeeEchHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEe
Confidence            22345556 788999999876643     6779999999999  99988888899999999999999988877 999987


Q ss_pred             c
Q 024337          267 A  267 (269)
Q Consensus       267 ~  267 (269)
                      +
T Consensus       379 ~  379 (380)
T 1vj0_A          379 E  379 (380)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=3.1e-40  Score=276.30  Aligned_cols=250  Identities=18%  Similarity=0.170  Sum_probs=211.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe---------------------------------ccceeeEEEecCC--ceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------------MTGWEEYSLITAP--YLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~p   48 (269)
                      -|++|+|+++|++|++|++||+|++                                 .|+|+||++++++  .++++ |
T Consensus        59 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~i-P  137 (352)
T 3fpc_A           59 HEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHL-P  137 (352)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEEC-C
T ss_pred             CcceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEEC-C
Confidence            5788999999999999999999984                                 2799999999986  89999 9


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      ++++.. ++|.+++++.|||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|++
T Consensus       138 ~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~  213 (352)
T 3fpc_A          138 KEIPLE-AAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYGAT  213 (352)
T ss_dssp             TTSCHH-HHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHTCC
T ss_pred             CCCCHH-HHhhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCc
Confidence            985544 4777889999999999 7789999999999996 9999999999999999 8999999999999999 99999


Q ss_pred             eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc--hHHHhhcce
Q 024337          128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN--LMYLVSKRL  203 (269)
Q Consensus       128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~  203 (269)
                      +++|+++. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    ......  ......++.
T Consensus       214 ~vi~~~~~-~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~~  288 (352)
T 3fpc_A          214 DIINYKNG-DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEG----DNIDIPRSEWGVGMGHK  288 (352)
T ss_dssp             EEECGGGS-CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSC----SEEEEETTTTGGGTBCE
T ss_pred             eEEcCCCc-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCC----CceecchhHhhhhcccc
Confidence            99999887 899999999988 89999999998 7899999999999999999875421    111111  112334677


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccc-cccHHHHHHHHhcCCC-cceEEEEec
Q 024337          204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEG-LESAPAALIGLFSGQN-VGKQVVAVA  267 (269)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~~~~~~a~~~~~~~~~-~gkvvv~~~  267 (269)
                      ++.++....    ..+.++++++++.+|++++.  ++++|+ |+++++|++.+.+++. .+|+|++++
T Consensus       289 ~i~g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          289 HIHGGLCPG----GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             EEEEBCCCC----HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             EEEEeeccC----chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            777765422    25678999999999999874  778898 9999999999998664 489999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-40  Score=274.30  Aligned_cols=246  Identities=17%  Similarity=0.182  Sum_probs=210.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|+.|++||+|++                               .|+|+||+++|+++++++ |++  
T Consensus        66 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~~--  142 (352)
T 1e3j_A           66 HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKL-PDN--  142 (352)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTT--
T ss_pred             ccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEEC-cCC--
Confidence            4788999999999999999999985                               279999999999999999 988  


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      ++++.|++..++.|||+++ +.++++++++|||+|+ |++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+
T Consensus       143 ~~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~  219 (352)
T 1e3j_A          143 VSLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVV  219 (352)
T ss_dssp             SCHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             CCHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcC
Confidence            4545455557889999999 6789999999999997 99999999999999999999999999999999 9999999998


Q ss_pred             CC-hhhHHHHHHHHCC---C-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeee
Q 024337          133 KE-EADLNAALKRYFP---E-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME  206 (269)
Q Consensus       133 ~~-~~~~~~~i~~~~~---~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (269)
                      ++ . ++.+.+++.++   + ++|++|||+|. ..++.++++++++|+++.+|....      ....++..++.+++++.
T Consensus       220 ~~~~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~  292 (352)
T 1e3j_A          220 DPAK-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIK  292 (352)
T ss_dssp             CTTT-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEE
T ss_pred             cccc-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEE
Confidence            84 5 67777777664   4 89999999998 578999999999999999986321      12344567888999998


Q ss_pred             eeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCC-CcceEEEEecC
Q 024337          207 GFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQ-NVGKQVVAVAP  268 (269)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~~~  268 (269)
                      ++...      .+.++++++++.+|+++  +.++++|+|+++++|++.+.+++ ..+|+|+++++
T Consensus       293 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          293 SVFRY------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             ECCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             Eeccc------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            87542      23578899999999864  56778899999999999999887 68999999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2.5e-39  Score=270.29  Aligned_cols=246  Identities=21%  Similarity=0.284  Sum_probs=214.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecC-CceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITA-PYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~-~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|+.|++||+|++.                              |+|+||+++|+ +.++++ + +++
T Consensus        68 ~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~-~~~  145 (347)
T 1jvb_A           68 HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-R-RLN  145 (347)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-S-SSC
T ss_pred             ccceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-C-CCC
Confidence            47789999999999999999999752                              78999999999 999999 4 433


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      .. ++|++++++.|||+++. .++++++++|+|+|++|++|++++|+++.. |++|+++++++++.+.++ ++|++.++|
T Consensus       146 ~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~  222 (347)
T 1jvb_A          146 AV-EAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVIN  222 (347)
T ss_dssp             HH-HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEE
T ss_pred             HH-HcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCEEec
Confidence            33 47889999999999995 588999999999999779999999999999 999999999999999998 899999999


Q ss_pred             cCChhhHHHHHHHHCC-CCccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          132 YKEEADLNAALKRYFP-EGIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       132 ~~~~~~~~~~i~~~~~-~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      +.+. ++.+.+.+.++ +++|++||++|.. .++.++++++++|+++.+|....     .. ..++..++.+++++.++.
T Consensus       223 ~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~-~~~~~~~~~~~~~i~g~~  295 (347)
T 1jvb_A          223 ASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-----DL-HYHAPLITLSEIQFVGSL  295 (347)
T ss_dssp             TTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC-----CC-CCCHHHHHHHTCEEEECC
T ss_pred             CCCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC-----CC-CCCHHHHHhCceEEEEEe
Confidence            8876 78888888876 5899999999985 89999999999999999987431     11 345567788999998876


Q ss_pred             ecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ...     .+.++++++++.+|++++.++++|+|+++++|++.+.+++..||+|+++
T Consensus       296 ~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          296 VGN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             SCC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ccC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            543     6779999999999999998889999999999999999998889999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=7.2e-41  Score=304.39  Aligned_cols=253  Identities=20%  Similarity=0.255  Sum_probs=218.5

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      ..|++|+|+++|++|++|++||+|+++  |+|+||++++.+.++++ |++++.. ++|++++.+.|||+++.+.+++++|
T Consensus       269 G~E~aG~V~~vG~~V~~~~vGDrV~~~~~G~~ae~~~v~~~~~~~i-P~~ls~~-~AA~l~~~~~Ta~~al~~~a~l~~G  346 (795)
T 3slk_A          269 GSEGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVADHRMVTRI-PAGWSFA-RAASVPIVFLTAYYALVDLAGLRPG  346 (795)
T ss_dssp             CCCEEEEEEEECSSCCSSCTTCEEEECCSSCSSSEEEEETTSEEEC-CTTCCHH-HHHHHHHHHHHHHCCCCCCTCCCTT
T ss_pred             cceeEEEEEEeCCCCCcCCCCCEEEEEecCCCcCEEEeehHHEEEC-CCCCCHH-HHHhhhHHHHHHHHHHHHHhCCCCC
Confidence            368999999999999999999999988  89999999999999999 9985544 5889999999999999888999999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~  159 (269)
                      ++|||+|++|++|++++|+||.+|++|+++++++ +.+.+  ++|+++++|+++. ++.+.+++.+++ ++|+||||+|+
T Consensus       347 ~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg  422 (795)
T 3slk_A          347 ESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV--ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAG  422 (795)
T ss_dssp             CCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCT
T ss_pred             CEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh--hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCc
Confidence            9999999999999999999999999999999554 55554  4899999999987 999999999988 99999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeeeee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYVED  238 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~  238 (269)
                      +.+..++++++++|+++.+|....       ..........+++++.++.+... +....+.++++++++++|++++.+.
T Consensus       423 ~~~~~~l~~l~~~Gr~v~iG~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~  495 (795)
T 3slk_A          423 EFADASLRMLPRGGRFLELGKTDV-------RDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPV  495 (795)
T ss_dssp             TTTHHHHTSCTTCEEEEECCSTTC-------CCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCE
T ss_pred             HHHHHHHHHhcCCCEEEEeccccc-------cCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcc
Confidence            999999999999999999987432       11111122346777777665332 3345678999999999999999988


Q ss_pred             hccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          239 MAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       239 ~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++|+++++++||+.+.+++..||+|+.+++
T Consensus       496 ~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          496 TAWDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             EEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             eeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            999999999999999999999999998754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.2e-40  Score=274.61  Aligned_cols=244  Identities=20%  Similarity=0.260  Sum_probs=208.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe---------------------------------------ccceeeEEEecCCcee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------------------MTGWEEYSLITAPYLF   44 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~~~~~~   44 (269)
                      -|++|+|+++|++|+.|++||+|++                                       .|+|+||+++|.+.++
T Consensus        82 hE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~  161 (369)
T 1uuf_A           82 HEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVL  161 (369)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCE
T ss_pred             cCceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEE
Confidence            5788999999999999999999973                                       1789999999999999


Q ss_pred             ecCCCC-CCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 024337           45 KIQHTD-VPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK  123 (269)
Q Consensus        45 ~~~p~~-~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~  123 (269)
                      ++ |++ ++.. ++|++++++.|||+++.+ .+++++++|||+|+ |++|++++|+|+.+|++|++++++++++++++ +
T Consensus       162 ~~-P~~~ls~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~  236 (369)
T 1uuf_A          162 RI-RHPQEQLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-A  236 (369)
T ss_dssp             EC-CSCGGGHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-H
T ss_pred             EC-CCCCCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H
Confidence            99 998 7765 688999999999999965 68999999999998 99999999999999999999999999999999 8


Q ss_pred             cCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcc
Q 024337          124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKR  202 (269)
Q Consensus       124 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  202 (269)
                      +|+++++|+.+. ++.+.+   . +++|++|||+|. ..++.++++++++|+++.+|....     .....+...++.++
T Consensus       237 lGa~~vi~~~~~-~~~~~~---~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~  306 (369)
T 1uuf_A          237 LGADEVVNSRNA-DEMAAH---L-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKR  306 (369)
T ss_dssp             HTCSEEEETTCH-HHHHTT---T-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTT
T ss_pred             cCCcEEeccccH-HHHHHh---h-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCC-----CccccCHHHHHhCC
Confidence            999999998875 543333   2 479999999997 578999999999999999987432     11134456778899


Q ss_pred             eeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          203 LRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +++.++....     .+.++++++++++|++++.+. .|+|+++++|++.+.+++..||+|+++++
T Consensus       307 ~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          307 RAIAGSMIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             CEEEECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             cEEEEeecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            9999876543     467889999999999998765 69999999999999998888999998864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=4.1e-39  Score=267.70  Aligned_cols=257  Identities=45%  Similarity=0.732  Sum_probs=214.2

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecCCCC----CCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTD----VPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~----~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      |++|+|++  ++++.|++||||++.|+|+||++++.+.++++ |++    ++....+|++++++.|||+++.+.++++++
T Consensus        70 e~~G~Vv~--~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g  146 (333)
T 1v3u_A           70 QQVARVVE--SKNSAFPAGSIVLAQSGWTTHFISDGKGLEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGG  146 (333)
T ss_dssp             CEEEEEEE--ESCTTSCTTCEEEECCCSBSEEEESSTTEEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSS
T ss_pred             ceEEEEEe--cCCCCCCCCCEEEecCceEEEEEechHHeEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCC
Confidence            45566666  47889999999999999999999999999999 886    554422589999999999999777899999


Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCC-hhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~-~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      ++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+ . ++.+.+.+.+++++|++|||+|.
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~  224 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDNVGG  224 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEESSCH
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEECCCh
Confidence            99999999999999999999999999999999999999997 999988999877 5 78888888776689999999999


Q ss_pred             hhHhhhHhhhhcCCEEEEEeccccccCCC-CCCccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHCCCeeeee
Q 024337          160 KTLDAVLPNMKIRGRIAACGMISQYNLDK-PEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEGKLVYVE  237 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~  237 (269)
                      ..+..++++++++|+++.+|......... .....+...++.+++++.++....+. ....+.++++++++.+|++++.+
T Consensus       225 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  304 (333)
T 1v3u_A          225 EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHE  304 (333)
T ss_dssp             HHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCE
T ss_pred             HHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcc
Confidence            88999999999999999998754311000 11112456788899999998765432 34467889999999999999887


Q ss_pred             ehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          238 DMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       238 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ..+++|+++++|++.+.+++..||+|+++
T Consensus       305 ~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          305 HVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             EEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            77789999999999999988889999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=7.5e-40  Score=273.57  Aligned_cols=245  Identities=22%  Similarity=0.211  Sum_probs=210.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|++|++||||++.                              |+|+||+++|++.++++ |+++  
T Consensus        67 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~--  143 (348)
T 2d8a_A           67 HEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKN-PKSI--  143 (348)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEEC-CTTS--
T ss_pred             ccceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEEC-CCCC--
Confidence            57889999999999999999999863                              79999999999999999 9984  


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +++.|++..++.|||+++ +.+++ ++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|+++++|+
T Consensus       144 ~~~~aa~~~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~  219 (348)
T 2d8a_A          144 PPEYATLQEPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINP  219 (348)
T ss_dssp             CHHHHTTHHHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEECT
T ss_pred             CHHHHHhhhHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECC
Confidence            444344445889999999 67889 9999999999 9999999999999999 9999999999999999 9999999999


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccch-HHHhhcceeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL-MYLVSKRLRMEGFI  209 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  209 (269)
                      ++. ++.+.+++.+++ ++|++|||+|. ..++.++++++++|+++.+|....      ....++ ..++.+++++.++.
T Consensus       220 ~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~  292 (348)
T 2d8a_A          220 FEE-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG------KVTIDFNNLIIFKALTIYGIT  292 (348)
T ss_dssp             TTS-CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHTTTTTCEEEECC
T ss_pred             CCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CcccCchHHHHhCCcEEEEec
Confidence            886 888899998877 89999999997 888999999999999999987432      123445 56778999998875


Q ss_pred             ecccccchHHHHHHHHHHHHCCCe--eeeeehccc-cccHHHHHHHHhcCCCcceEEEEec
Q 024337          210 VLDHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEG-LESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~-~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      ...    ..+.++.+++++.+|++  ++.++++|+ |+++++|++.+.+ +..+|+|++++
T Consensus       293 ~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          293 GRH----LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             CCC----SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             CCC----cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            432    15678999999999985  566778899 9999999999977 56789999864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=3.8e-41  Score=278.99  Aligned_cols=249  Identities=20%  Similarity=0.273  Sum_probs=210.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe---------ccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG---------MTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV   74 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~   74 (269)
                      -|++|+|+++|  ++.|++||+|++         .|+|+||+++|++.++++ |++++.. ++|++++.+.|||++++..
T Consensus        63 ~E~~G~V~~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~  138 (324)
T 3nx4_A           63 IDFAGTVHASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVAL-PAGLSSR-NAMIIGTAGFTAMLCVMAL  138 (324)
T ss_dssp             SEEEEEEEEES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEEEeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHh
Confidence            46788999988  678999999995         389999999999999999 9985544 5889999999999998643


Q ss_pred             --hcCCCCC-EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           75 --CSAKHGE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        75 --~~~~~~~-~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                        .++++++ .|||+|++|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+++. +.   +++.+++++|
T Consensus       139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~---~~~~~~~~~d  213 (324)
T 3nx4_A          139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEF-AE---SRPLEKQLWA  213 (324)
T ss_dssp             HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC---CCSSCCCCEE
T ss_pred             hhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH---HHhhcCCCcc
Confidence              4466632 3999999999999999999999999999999999999999 9999999998764 33   4555556899


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHC
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE  230 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  230 (269)
                      ++|||+|+..++.++++++++|+++.+|....     .....+...++.+++++.++..... .....+.++.+++++++
T Consensus       214 ~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  288 (324)
T 3nx4_A          214 GAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG-----FALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPE  288 (324)
T ss_dssp             EEEESSCHHHHHHHHHTEEEEEEEEECCCTTC-----SEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCH
T ss_pred             EEEECCCcHHHHHHHHHHhcCCEEEEEecCCC-----CCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999987542     1223455678889999999876443 33345778999999999


Q ss_pred             CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      |++++. .++|+|+++++|++.+.+++..||+|++++
T Consensus       289 g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          289 SFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             CCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            999887 889999999999999999999999999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3.1e-40  Score=275.40  Aligned_cols=245  Identities=20%  Similarity=0.183  Sum_probs=210.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++|++|++||+|++.                              |+|+||++++++.++++ |++  +
T Consensus        63 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~--~  139 (343)
T 2dq4_A           63 HEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVN-PKD--L  139 (343)
T ss_dssp             CEEEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEE-CTT--S
T ss_pred             ccceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEEC-CCC--C
Confidence            57899999999999999999999862                              79999999999999999 998  4


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +++.|++..++.|||+++.+.+++ ++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++ +++++|+
T Consensus       140 ~~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~  215 (343)
T 2dq4_A          140 PFEVAAILEPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-ADRLVNP  215 (343)
T ss_dssp             CHHHHTTHHHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CSEEECT
T ss_pred             CHHHHHhhhHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HHhccCc
Confidence            444444447888999999547889 9999999999 9999999999999999 9999999999999998 88 8889999


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccch-HHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL-MYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  210 (269)
                      ++. ++.+.+++.++.++|++|||+|. ..++.++++++++|+++.+|....      ....++ ..++.+++++.++..
T Consensus       216 ~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~  288 (343)
T 2dq4_A          216 LEE-DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAG  288 (343)
T ss_dssp             TTS-CHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCS
T ss_pred             Ccc-CHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeec
Confidence            876 88888888773389999999998 789999999999999999987431      223455 667889999988765


Q ss_pred             cccccchHHHHHHHHHHHHCCCe--eeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          211 LDHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      ..    ..+.++++++++++|++  ++.++++|+|+++++|++.+.+++. ||+|++++
T Consensus       289 ~~----~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          289 RR----LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             CC----TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             CC----CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            31    25678999999999984  5677789999999999999998877 99999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=7.4e-40  Score=275.20  Aligned_cols=245  Identities=17%  Similarity=0.140  Sum_probs=208.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++|++|++||+|++                               .|+|+||+++|++.++++ |+ ++
T Consensus        78 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~-~s  155 (363)
T 3m6i_A           78 HESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GN-MS  155 (363)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEEC-TT-CC
T ss_pred             cceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEEC-CC-CC
Confidence            5788999999999999999999985                               279999999999999999 88 65


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN  131 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~  131 (269)
                      .. ++|.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+||.+|++ |++++.++++.++++ ++ ++.+++
T Consensus       156 ~~-~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~~~~~~  229 (363)
T 3m6i_A          156 YE-NGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-CPEVVT  229 (363)
T ss_dssp             HH-HHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-CTTCEE
T ss_pred             HH-HHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-chhccc
Confidence            54 45544 6889999999 7789999999999998 99999999999999996 999999999999999 88 666665


Q ss_pred             cC----ChhhHHHHHHHHCCC-CccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337          132 YK----EEADLNAALKRYFPE-GIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM  205 (269)
Q Consensus       132 ~~----~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (269)
                      +.    +..++.+.+++.+++ ++|++|||+|+. .+..++++++++|+++.+|....      ....++..++.+++++
T Consensus       230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i  303 (363)
T 3m6i_A          230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKN------EIQIPFMRASVREVDL  303 (363)
T ss_dssp             EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCS------CCCCCHHHHHHHTCEE
T ss_pred             ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCC------CccccHHHHHhcCcEE
Confidence            53    222788889999877 999999999985 88999999999999999987432      2235566788899999


Q ss_pred             eeeeecccccchHHHHHHHHHHHHCCCe--eeeeehccccccHHHHHHHHhcC-CCcceEEEEecC
Q 024337          206 EGFIVLDHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEGLESAPAALIGLFSG-QNVGKQVVAVAP  268 (269)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~~~~  268 (269)
                      .++...      .+.++.+++++++|++  ++.++++|+|+++++|++.+.++ ...+|++++.++
T Consensus       304 ~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          304 QFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             EECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             EEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            887643      3557889999999998  45677899999999999999987 567899999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.8e-41  Score=278.62  Aligned_cols=238  Identities=18%  Similarity=0.196  Sum_probs=188.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      -|++|+|+++|++|++|++||+|++.      |+|+||+++|++.++++ |++++.. ++|++++++.|||+++ +.+++
T Consensus        64 ~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~  140 (315)
T 3goh_A           64 VDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTL-PDNLSFE-RAAALPCPLLTAWQAF-EKIPL  140 (315)
T ss_dssp             SEEEEEEEEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEEC-CTTSCHH-HHHTSHHHHHHHHHHH-TTSCC
T ss_pred             eeeEEEEEEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccC-cCCCCHH-HHhhCccHHHHHHHHH-hhcCC
Confidence            57889999999999999999999984      89999999999999999 9985444 4778999999999999 88999


Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +++++|||+|+ |++|++++|+|+.+|++|++++ ++++.++++ ++|++++++     + .+.+    ++++|++|||+
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~-----d-~~~v----~~g~Dvv~d~~  207 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KRGVRHLYR-----E-PSQV----TQKYFAIFDAV  207 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HHTEEEEES-----S-GGGC----CSCEEEEECC-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-HcCCCEEEc-----C-HHHh----CCCccEEEECC
Confidence            99999999999 9999999999999999999999 999999999 999998884     2 1112    44899999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----cc---chHHHHHHHHHHHH
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YH---LYPKFLEMIIPHIK  229 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~  229 (269)
                      |+..+..++++++++|+++.++....    ..     ....+.+.+.+....+...     +.   ...+.++.++++++
T Consensus       208 g~~~~~~~~~~l~~~G~~v~~g~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  278 (315)
T 3goh_A          208 NSQNAAALVPSLKANGHIICIQDRIP----AP-----IDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIA  278 (315)
T ss_dssp             ------TTGGGEEEEEEEEEECCC-------------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHhcCCCEEEEEeCCCC----cc-----ccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHH
Confidence            99777899999999999999975321    00     0112223333333332111     11   23456889999999


Q ss_pred             CCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          230 EGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +|++++.++++|+|+++++|++.+.  +..||+|+++++
T Consensus       279 ~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          279 QGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             TTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             CCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            9999999999999999999999998  667899999874

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=3.8e-39  Score=270.01  Aligned_cols=244  Identities=20%  Similarity=0.224  Sum_probs=207.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK   45 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~   45 (269)
                      -|++|+|+++|++|+.|++||+|+.                                      .|+|+||+++|++.+++
T Consensus        69 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  148 (357)
T 2cf5_A           69 HEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVK  148 (357)
T ss_dssp             CEEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEE
T ss_pred             cceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEE
Confidence            4778999999999999999999963                                      37899999999999999


Q ss_pred             cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 024337           46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF  124 (269)
Q Consensus        46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~  124 (269)
                      + |++++.. ++|++++++.|||+++. ..+++ ++++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+++++
T Consensus       149 ~-P~~ls~~-~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l  224 (357)
T 2cf5_A          149 I-PEGMAVE-QAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL  224 (357)
T ss_dssp             C-CSSCCHH-HHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS
T ss_pred             C-cCCCCHH-HhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc
Confidence            9 9985544 57899999999999995 46788 9999999996 99999999999999999999999999988876689


Q ss_pred             CCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcce
Q 024337          125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRL  203 (269)
Q Consensus       125 g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  203 (269)
                      |+++++|+++. +   .+++.+ +++|++|||+|. ..++.++++++++|+++.+|....     +....+.. ++.+++
T Consensus       225 Ga~~vi~~~~~-~---~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~-~~~~~~  293 (357)
T 2cf5_A          225 GADDYVIGSDQ-A---KMSELA-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINN-----PLQFLTPL-LMLGRK  293 (357)
T ss_dssp             CCSCEEETTCH-H---HHHHST-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSS-----CCCCCHHH-HHHHTC
T ss_pred             CCceeeccccH-H---HHHHhc-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCC-----CccccCHH-HHhCcc
Confidence            99999998763 3   344444 379999999997 578999999999999999987432     11113444 788999


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++.++....     .+.++++++++.+|++++.+ ++|||+++++|++.+.+++..||+|+++++
T Consensus       294 ~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          294 VITGSFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             EEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             EEEEEccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            999876543     56789999999999998876 589999999999999999888999999865

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=9.4e-40  Score=274.09  Aligned_cols=244  Identities=17%  Similarity=0.163  Sum_probs=208.2

Q ss_pred             cccceEEEEeccCCC-CCCCCCeEE-----------------------------------e---ccceeeEEEecCCcee
Q 024337            4 ISGYGVAKVLDSENP-EFSKGDLVW-----------------------------------G---MTGWEEYSLITAPYLF   44 (269)
Q Consensus         4 i~~~G~v~~vg~~v~-~~~~Gd~V~-----------------------------------~---~g~~~~~~~v~~~~~~   44 (269)
                      -|++|+|+++|++|+ +|++||||+                                   +   .|+|+||+++|++.++
T Consensus        68 hE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~  147 (360)
T 1piw_A           68 HEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVV  147 (360)
T ss_dssp             CCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEE
T ss_pred             cCceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheE
Confidence            478999999999999 999999993                                   2   1789999999999999


Q ss_pred             ecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 024337           45 KIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF  124 (269)
Q Consensus        45 ~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~  124 (269)
                      ++ |++++.. ++|++++++.|||+++.+ ++++++++|||+|+ |++|++++|+|+.+|++|++++++++++++++ ++
T Consensus       148 ~i-P~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l  222 (360)
T 1piw_A          148 PI-PENIPSH-LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM  222 (360)
T ss_dssp             EC-CTTSCHH-HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH
T ss_pred             EC-CCCCCHH-HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc
Confidence            99 9985544 478899999999999965 89999999999999 99999999999999999999999999999999 89


Q ss_pred             CCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc---hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhc
Q 024337          125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG---KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSK  201 (269)
Q Consensus       125 g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  201 (269)
                      |+++++|+++..++.+.+.    +++|++|||+|.   ..++.++++++++|+++.+|....      ....+...++.+
T Consensus       223 Ga~~v~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~  292 (360)
T 1piw_A          223 GADHYIATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLK  292 (360)
T ss_dssp             TCSEEEEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCB
T ss_pred             CCCEEEcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC------ccccCHHHHHhC
Confidence            9999998864203333332    479999999998   788999999999999999987432      112334456788


Q ss_pred             ceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehcccccc--HHHHHHHHhcCCCcceEEEEecC
Q 024337          202 RLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLES--APAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++++.++....     .+.++++++++.+|++++.+ ++|+|++  +++|++.+.+++..||+|+++++
T Consensus       293 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          293 AVSISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             SCEEEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             CeEEEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            89998876543     56789999999999999888 8899999  99999999998888999999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.7e-39  Score=275.92  Aligned_cols=252  Identities=19%  Similarity=0.213  Sum_probs=211.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe-----------------------------------------ccceeeEEEecCC-
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG-----------------------------------------MTGWEEYSLITAP-   41 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~-----------------------------------------~g~~~~~~~v~~~-   41 (269)
                      -|++|+|+++|++|+.|++||+|++                                         .|+|+||++++.+ 
T Consensus        66 hE~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~  145 (398)
T 2dph_A           66 HEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYAD  145 (398)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHH
T ss_pred             CceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEecccc
Confidence            4789999999999999999999984                                         2789999999987 


Q ss_pred             -ceeecCCCCCCcchh----hhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 024337           42 -YLFKIQHTDVPLSYY----TGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD  115 (269)
Q Consensus        42 -~~~~~~p~~~~~~~~----~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~  115 (269)
                       .++++ |++++.. +    +|++++++.|||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++
T Consensus       146 ~~~~~i-P~~~~~~-~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~  221 (398)
T 2dph_A          146 YMLLKF-GDKEQAM-EKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPE  221 (398)
T ss_dssp             HHCEEC-SSHHHHH-HTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHH
T ss_pred             CeEEEC-CCCCChh-hhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence             89999 8884433 3    688999999999999 6789999999999997 9999999999999999 9999999999


Q ss_pred             HHHHHHHHcCCceeEecCChhhH-HHHHHHHCCC-CccEEEeCCCch---------------hHhhhHhhhhcCCEEEEE
Q 024337          116 KVDLLKNKFGFDEAFNYKEEADL-NAALKRYFPE-GIDVYFENVGGK---------------TLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       116 ~~~~~~~~~g~~~~~~~~~~~~~-~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~  178 (269)
                      +.++++ ++|++ ++|+++. ++ .+.+++.+++ ++|++|||+|+.               .+..++++++++|+++.+
T Consensus       222 ~~~~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~  298 (398)
T 2dph_A          222 RLKLLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP  298 (398)
T ss_dssp             HHHHHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred             HHHHHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence            999999 99995 8898876 65 8888888877 899999999974               588999999999999999


Q ss_pred             ecccc-ccCC------CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--e--eeehccccccHH
Q 024337          179 GMISQ-YNLD------KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--Y--VEDMAEGLESAP  247 (269)
Q Consensus       179 g~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~  247 (269)
                      |.... ....      ......++..++.+++++.++...     ..+.++.+++++.+|+++  +  .++++|+|++++
T Consensus       299 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~  373 (398)
T 2dph_A          299 GIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP-----VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAP  373 (398)
T ss_dssp             SCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC-----GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHH
T ss_pred             ccccccccccccccccCCcccccHHHHhhcCCEEEEeccC-----cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHH
Confidence            87421 0000      011234556678899988876432     245688999999999998  6  567899999999


Q ss_pred             HHHHHHhcCCCcceEEEEecC
Q 024337          248 AALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       248 ~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +|++.+.+++. +|+|++++.
T Consensus       374 ~A~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          374 DGYAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             HHHHHHHTTCS-CEEEECTTS
T ss_pred             HHHHHHhcCCc-eEEEEecCc
Confidence            99999998887 999998764

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.3e-39  Score=277.11  Aligned_cols=246  Identities=19%  Similarity=0.218  Sum_probs=212.0

Q ss_pred             cccceEEEEeccCC------CCCCCCCeEEe------------------------------ccceeeEEEecCCceeecC
Q 024337            4 ISGYGVAKVLDSEN------PEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQ   47 (269)
Q Consensus         4 i~~~G~v~~vg~~v------~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~   47 (269)
                      -|++|+|+++|++|      +.|++||+|++                              .|+|+||++++.+.++++ 
T Consensus        97 ~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~i-  175 (404)
T 3ip1_A           97 HEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSL-  175 (404)
T ss_dssp             CEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEC-
T ss_pred             ccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEec-
Confidence            46789999999999      88999999986                              289999999999999999 


Q ss_pred             CCCCCc-----chhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Q 024337           48 HTDVPL-----SYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLL  120 (269)
Q Consensus        48 p~~~~~-----~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~  120 (269)
                      |++++.     ..++|+++.++.|||+++... ++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++
T Consensus       176 P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  254 (404)
T 3ip1_A          176 RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA  254 (404)
T ss_dssp             GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            887542     235889999999999999655 48999999999998 9999999999999999 999999999999999


Q ss_pred             HHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCch--hHhhhHhhh----hcCCEEEEEeccccccCCCCCCcc
Q 024337          121 KNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGK--TLDAVLPNM----KIRGRIAACGMISQYNLDKPEGVH  193 (269)
Q Consensus       121 ~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~  193 (269)
                      + ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+.  .+..+++.+    +++|+++.+|....      ....
T Consensus       255 ~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~------~~~~  326 (404)
T 3ip1_A          255 K-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA------KIPL  326 (404)
T ss_dssp             H-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS------CEEE
T ss_pred             H-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC------CCcc
Confidence            9 9999999999887 899999999988 999999999985  677777777    99999999987542      2345


Q ss_pred             chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      +...++.+++++.++....    ..+.++.+++++++| ++  +.++++|+|+++++|++.+.    .||+|+++++
T Consensus       327 ~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~  394 (404)
T 3ip1_A          327 TGEVFQVRRAQIVGSQGHS----GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTM  394 (404)
T ss_dssp             CHHHHHHTTCEEEECCCCC----STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEE
T ss_pred             cHHHHhccceEEEEecCCC----chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCC
Confidence            6778889999999886432    145688999999999 65  45778999999999999987    4788887654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=5.4e-39  Score=268.00  Aligned_cols=240  Identities=20%  Similarity=0.213  Sum_probs=190.1

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEec-CCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLIT-APYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~-~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++ ++|++||+|++.                              |+|+||+++| ++.++++ + +++
T Consensus        65 ~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~-~l~  141 (344)
T 2h6e_A           65 HENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-N-SLS  141 (344)
T ss_dssp             CCEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-S-SSC
T ss_pred             ccceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-C-CCC
Confidence            4789999999999 999999999753                              7899999999 9999999 4 533


Q ss_pred             cchhhhhcCCcchhHHHHHHHh----hcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCC
Q 024337           53 LSYYTGILGMPGMTAYVGFYEV----CSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGF  126 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~----~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~  126 (269)
                      .. ++|++++++.|||+++...    +++ ++++|||+|+ |++|++++|+|+.+  |++|+++++++++.++++ ++|+
T Consensus       142 ~~-~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa  217 (344)
T 2h6e_A          142 PV-EAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGA  217 (344)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTC
T ss_pred             HH-HhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCC
Confidence            33 4788999999999999654    288 9999999999 99999999999999  999999999999999999 9999


Q ss_pred             ceeEecCC-hhhHHHHHHHHCCC-CccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcce
Q 024337          127 DEAFNYKE-EADLNAALKRYFPE-GIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRL  203 (269)
Q Consensus       127 ~~~~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  203 (269)
                      ++++|+++ . ++.   .+.+++ ++|++|||+|.. .++.++++++++|+++.+|....      ....+...++.+++
T Consensus       218 ~~vi~~~~~~-~~~---~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~  287 (344)
T 2h6e_A          218 DYVSEMKDAE-SLI---NKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK------RVSLEAFDTAVWNK  287 (344)
T ss_dssp             SEEECHHHHH-HHH---HHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------CCCCCHHHHHHTTC
T ss_pred             CEEeccccch-HHH---HHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCC------CcccCHHHHhhCCc
Confidence            99998765 3 433   344445 899999999985 89999999999999999987432      12345567788999


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ++.++....     .+.++++++++.+|++++.+ ++|+|+++++|++.+.+++..||+|+++
T Consensus       288 ~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          288 KLLGSNYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             EEEECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             EEEEEecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            999876543     57789999999999999988 8999999999999999988889999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-39  Score=272.26  Aligned_cols=253  Identities=19%  Similarity=0.176  Sum_probs=209.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe----------------------------------------ccceeeEEEecCC--
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------MTGWEEYSLITAP--   41 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--   41 (269)
                      -|++|+|+++|++|+.|++||+|++                                        .|+|+||+++|++  
T Consensus        67 hE~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~  146 (398)
T 1kol_A           67 HEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADF  146 (398)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHH
T ss_pred             cccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhC
Confidence            5789999999999999999999973                                        1789999999987  


Q ss_pred             ceeecCCCCCCcchh----hhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 024337           42 YLFKIQHTDVPLSYY----TGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK  116 (269)
Q Consensus        42 ~~~~~~p~~~~~~~~----~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~  116 (269)
                      .++++ |++++.. +    +|++++++.|||+++. .++++++++|||+|+ |++|++++|+||.+|+ +|+++++++++
T Consensus       147 ~~~~~-P~~~~~~-~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~  222 (398)
T 1kol_A          147 NLLKL-PDRDKAM-EKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPAR  222 (398)
T ss_dssp             HCEEC-SCHHHHH-HTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH
T ss_pred             eEEEC-CCCcchh-hhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHH
Confidence            89999 8874333 3    5789999999999995 689999999999996 9999999999999999 89999999999


Q ss_pred             HHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCch----------------hHhhhHhhhhcCCEEEEEe
Q 024337          117 VDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGK----------------TLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       117 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~----------------~~~~~~~~l~~~G~~v~~g  179 (269)
                      +++++ ++|++ ++|+++..++.+.+++.+++ ++|++|||+|..                .+..++++++++|+++.+|
T Consensus       223 ~~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G  300 (398)
T 1kol_A          223 LAHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG  300 (398)
T ss_dssp             HHHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred             HHHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence            99998 99997 78887641378888888876 899999999974                6889999999999999998


Q ss_pred             ccc-cccCC------CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee---eeeehccccccHHHH
Q 024337          180 MIS-QYNLD------KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV---YVEDMAEGLESAPAA  249 (269)
Q Consensus       180 ~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~a  249 (269)
                      ... +....      .......+..++.+++++.+...     ...+.++.+++++.+|+++   +.++++|+|+++++|
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A  375 (398)
T 1kol_A          301 LYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRG  375 (398)
T ss_dssp             CCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHH
T ss_pred             cccCCcccccccccccccccccHHHHhhcccEEEeccc-----ChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHH
Confidence            641 11000      00123445667788888876532     2356788999999999998   456789999999999


Q ss_pred             HHHHhcCCCcceEEEEecC
Q 024337          250 LIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       250 ~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++.+.+++. +|+|++++.
T Consensus       376 ~~~~~~~~~-gKvvi~~~~  393 (398)
T 1kol_A          376 YGEFDAGVP-KKFVIDPHK  393 (398)
T ss_dssp             HHHHHHTCS-CEEEECTTC
T ss_pred             HHHHhCCCc-eEEEEEeCC
Confidence            999998887 999998764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.4e-39  Score=271.43  Aligned_cols=256  Identities=22%  Similarity=0.286  Sum_probs=203.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhc-
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCS-   76 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~-   76 (269)
                      -|++|+|+++|++|+.|++||+|++.      |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.++ 
T Consensus       100 ~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~ls~~-~Aa~l~~~~~tA~~al~~~~~~  177 (375)
T 2vn8_A          100 RDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHK-PKSLTHT-QAASLPYVALTAWSAINKVGGL  177 (375)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCC
T ss_pred             eeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeC-CCCCCHH-HHhhhHHHHHHHHHHHHHhccc
Confidence            47789999999999999999999984      89999999999999999 9985544 578888889999999977788 


Q ss_pred             ---CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEE
Q 024337           77 ---AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        77 ---~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                         ++++++|||+||+|++|++++|+|+.+|++|++++ ++++.++++ ++|++.++|+++. ++.+.+.+.  +++|++
T Consensus       178 ~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~~~~~~~~--~g~D~v  252 (375)
T 2vn8_A          178 NDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQLKSL--KPFDFI  252 (375)
T ss_dssp             CTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CHHHHHHTS--CCBSEE
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HHHHHHhhc--CCCCEE
Confidence               99999999999999999999999999999999998 778899998 9999999999876 777777653  379999


Q ss_pred             EeCCCch--hHhhhHhhhhcCCEEEEEeccccccCCCCCCccch----HHHhhcce-ee-eeeeec-ccccchHHHHHHH
Q 024337          154 FENVGGK--TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL----MYLVSKRL-RM-EGFIVL-DHYHLYPKFLEMI  224 (269)
Q Consensus       154 id~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~----~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~  224 (269)
                      |||+|+.  .+..++++++++|+++.+|...............+    ..++.+++ ++ .+.... .+.....+.++++
T Consensus       253 id~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  332 (375)
T 2vn8_A          253 LDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDI  332 (375)
T ss_dssp             EESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHH
T ss_pred             EECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHHH
Confidence            9999985  45899999999999999986432100000000000    12223222 11 121110 0111235778999


Q ss_pred             HHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          225 IPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       225 ~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      ++++++|++++.++++|+|+++++|++.+.+++..||+|+++
T Consensus       333 ~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          333 AELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            999999999998889999999999999999988889999976

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.4e-38  Score=267.35  Aligned_cols=244  Identities=17%  Similarity=0.177  Sum_probs=208.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK   45 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~   45 (269)
                      -|++|+|+++|++|+.|++||+|+.                                      .|+|+||+++|.+.+++
T Consensus        76 hE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~  155 (366)
T 1yqd_A           76 HEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIR  155 (366)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEE
T ss_pred             cceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEE
Confidence            5789999999999999999999973                                      27899999999999999


Q ss_pred             cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 024337           46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF  124 (269)
Q Consensus        46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~  124 (269)
                      + |++++.. ++|++++++.|||+++.+ .+++ ++++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+++++
T Consensus       156 ~-P~~ls~~-~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l  231 (366)
T 1yqd_A          156 F-PDNMPLD-GGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF  231 (366)
T ss_dssp             C-CTTSCTT-TTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS
T ss_pred             C-CCCCCHH-HhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            9 9985554 578899999999999954 6788 9999999997 99999999999999999999999999988876689


Q ss_pred             CCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcce
Q 024337          125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRL  203 (269)
Q Consensus       125 g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  203 (269)
                      |+++++|+.+. +   .+++.+ +++|++|||+|. ..++.++++++++|+++.+|....      ....+...++.+++
T Consensus       232 Ga~~v~~~~~~-~---~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~  300 (366)
T 1yqd_A          232 GADSFLVSRDQ-E---QMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK------PLELPAFSLIAGRK  300 (366)
T ss_dssp             CCSEEEETTCH-H---HHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSS------CEEECHHHHHTTTC
T ss_pred             CCceEEeccCH-H---HHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCC------CCCcCHHHHHhCCc
Confidence            99999998763 3   344444 379999999997 578999999999999999987432      12345567888999


Q ss_pred             eeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++.++....     .+.++++++++.+|++++.+ ++|+|+++++|++.+.+++..||+|+.+++
T Consensus       301 ~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          301 IVAGSGIGG-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             EEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             EEEEecCCC-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            998876543     56788999999999999876 589999999999999999888999998753

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=4.6e-40  Score=277.49  Aligned_cols=251  Identities=15%  Similarity=0.149  Sum_probs=209.8

Q ss_pred             cccceEEEEeccCC-CCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSEN-PEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v-~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      -|++|+|+++|++| ++|++||+|++.  |+|+||+++|++.++++ |++++.. ++|++++.+.|||+++. ... +++
T Consensus        96 ~e~~G~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~-~~~-~~g  171 (379)
T 3iup_A           96 NEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVL-PEGATPA-DGASSFVNPLTALGMVE-TMR-LEG  171 (379)
T ss_dssp             SCEEEEEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGGEEEC-CTTCCHH-HHTTSSHHHHHHHHHHH-HHH-HTT
T ss_pred             eeeEEEEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHHeEEC-CCCCCHH-HHHhhhhhHHHHHHHHH-Hhc-cCC
Confidence            57899999999999 889999999998  89999999999999999 9985554 58889999999998884 445 899


Q ss_pred             CEEEEec-CcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           81 ECVFISA-ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~g-a~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      ++|||+| |+|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|
T Consensus       172 ~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~v~~~t~~~g~d~v~d~~g  249 (379)
T 3iup_A          172 HSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASP-TFMQDLTEALVSTGATIAFDATG  249 (379)
T ss_dssp             CSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCEEETTST-THHHHHHHHHHHHCCCEEEESCE
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEEEeCCCh-HHHHHHHHHhcCCCceEEEECCC
Confidence            9999996 7899999999999999999999999999999999 9999999999987 899999998877 9999999999


Q ss_pred             c-hhHhhhHhhhh-----cC-----------CEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccc
Q 024337          159 G-KTLDAVLPNMK-----IR-----------GRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHL  216 (269)
Q Consensus       159 ~-~~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  216 (269)
                      + ..+..++++++     ++           |+++.+|....       .+.....++.+++++.++....+     +..
T Consensus       250 ~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~-------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  322 (379)
T 3iup_A          250 GGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT-------SPTEFNRNFGMAWGMGGWLLFPFLQKIGRER  322 (379)
T ss_dssp             EESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEE-------EEEEECCCSCSCEEEEECCHHHHHHHHCHHH
T ss_pred             chhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCC-------CccccccccccceEEEEEEeeeecccCCHHH
Confidence            8 56678888885     44           55555554321       11222334567888888876544     223


Q ss_pred             hHHHHHHHHHHHHCCCeeeeeehccccccH--HHHHHHHhcCCCcceEEEEecC
Q 024337          217 YPKFLEMIIPHIKEGKLVYVEDMAEGLESA--PAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       217 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ..+.++.+++++.+ .+++.++++|+|+++  ++|++.+.+++..||+|+++++
T Consensus       323 ~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          323 ANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             HHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             HHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            34556777888877 588888899999999  9999999999999999999875

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.3e-39  Score=270.48  Aligned_cols=239  Identities=16%  Similarity=0.124  Sum_probs=206.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-----------------------------------cceeeEEEecCCceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-----------------------------------TGWEEYSLITAPYLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~~p   48 (269)
                      -|++| |+++|++ +.|++||||++.                                   |+|+||+++|++.++++ |
T Consensus        63 ~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P  139 (357)
T 2b5w_A           63 HEAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRI-P  139 (357)
T ss_dssp             SEEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEEC-C
T ss_pred             ceeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEEC-C
Confidence            47889 9999999 999999999752                                   78999999999999999 9


Q ss_pred             CCCCcchhhhhcCCcchhHHHHHHHhhcCCCC------CEEEEecCcchHHHHH-HHHH-HHcCCE-EEEEeCCHH---H
Q 024337           49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG------ECVFISAASGAVGQLV-GQFA-KLLGCY-VVGSAGSKD---K  116 (269)
Q Consensus        49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~------~~vlI~ga~g~vG~~~-i~~a-~~~G~~-V~~~~~s~~---~  116 (269)
                      ++++   ++|+++.++.|||+++ +.++++++      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   +
T Consensus       140 ~~~~---~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~  214 (357)
T 2b5w_A          140 RSQA---ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPT  214 (357)
T ss_dssp             GGGS---TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHH
T ss_pred             CCcc---hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHH
Confidence            9854   5677899999999999 67889999      99999999 9999999 9999 999996 999999888   9


Q ss_pred             HHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccch
Q 024337          117 VDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL  195 (269)
Q Consensus       117 ~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  195 (269)
                      .++++ ++|++++ |+++. ++.+ +++. ++++|++|||+|. ..+..++++++++|+++.+|....     .....++
T Consensus       215 ~~~~~-~lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~  284 (357)
T 2b5w_A          215 IDIIE-ELDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSD-----WAFEVDA  284 (357)
T ss_dssp             HHHHH-HTTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCC-----CCCCCCH
T ss_pred             HHHHH-HcCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCC-----CCceecH
Confidence            99998 9999988 98876 7777 7777 5589999999998 588999999999999999987531     1123444


Q ss_pred             HHH----hhcceeeeeeeecccccchHHHHHHHHHHHHCC--C-eeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337          196 MYL----VSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG--K-LVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       196 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~  268 (269)
                      ..+    +.+++++.++....     .+.++++++++++|  + +++.++++|+|+++++|++.+   +..+|+|+++++
T Consensus       285 ~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          285 GAFHREMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHhHHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            556    78999999876543     67899999999999  8 688888899999999999988   346899999865

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-38  Score=264.34  Aligned_cols=250  Identities=23%  Similarity=0.324  Sum_probs=198.7

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHH-
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE-   73 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~-   73 (269)
                      -|++|+|+++  +++.|++||||++.         |+|+||+++|++.++++ |++++.. ++|++++++.|+|.+++. 
T Consensus        66 ~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~~l~~~-~aa~~~~~~~ta~~~l~~~  141 (328)
T 1xa0_A           66 IDLAGVVVSS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPL-PKGLTLK-EAMAIGTAGFTAALSIHRL  141 (328)
T ss_dssp             SEEEEEEEEC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHH
Confidence            3567777774  57889999999853         89999999999999999 9985544 578888889999988753 


Q ss_pred             -hhcCCCCC-EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           74 -VCSAKHGE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        74 -~~~~~~~~-~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                       .+++++++ +|||+|++|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+++. + .+.+++.+++++|
T Consensus       142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~~~~~~~~~~~~d  218 (328)
T 1xa0_A          142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-AERIRPLDKQRWA  218 (328)
T ss_dssp             HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC-----------CCSCCEE
T ss_pred             hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-HHHHHHhcCCccc
Confidence             36788887 9999999999999999999999999999999999999998 9999999998764 3 3344555545899


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHC
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE  230 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  230 (269)
                      ++|||+|+..+..++++++++|+++.+|...+.     ....++..++.+++++.++..... .....+.++.+.+++.+
T Consensus       219 ~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  293 (328)
T 1xa0_A          219 AAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKP  293 (328)
T ss_dssp             EEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCC
T ss_pred             EEEECCcHHHHHHHHHhhccCCEEEEEeecCCC-----CCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHc
Confidence            999999998899999999999999999875321     122344567789999988753222 12234567777888888


Q ss_pred             CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337          231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA  267 (269)
Q Consensus       231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  267 (269)
                      + +++ +.++|+|+++++|++.+.+++..||+|++++
T Consensus       294 g-l~~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          294 D-LER-IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             C-HHH-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             C-Cce-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            8 766 4578999999999999999888899999863

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.9e-39  Score=269.38  Aligned_cols=251  Identities=22%  Similarity=0.364  Sum_probs=203.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHH-
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE-   73 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~-   73 (269)
                      -|++|+|+++  +++.|++||||++.         |+|+||+++|++.++++ |++++.. ++|++++++.|+|.+++. 
T Consensus        67 ~E~~G~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~  142 (330)
T 1tt7_A           67 IDAAGTVVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPL-PQNLSLK-EAMVYGTAGFTAALSVHRL  142 (330)
T ss_dssp             SEEEEEEEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEEC-CCCCCHH-HHhhccchHHHHHHHHHHH
Confidence            3677888875  56889999999853         89999999999999999 9985544 578888889999988753 


Q ss_pred             -hhcCCCCC-EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           74 -VCSAKHGE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        74 -~~~~~~~~-~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                       .+++++++ +|||+|++|++|++++|+|+.+|++|++++++++++++++ ++|+++++|+++. + .+.+++.+++++|
T Consensus       143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~~~~~~~~~~~~d  219 (330)
T 1tt7_A          143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV-Y-DGTLKALSKQQWQ  219 (330)
T ss_dssp             HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-SSCCCSSCCCCEE
T ss_pred             HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-HHHHHHhhcCCcc
Confidence             36788887 9999999999999999999999999999999999999998 8999999986532 2 1223333444899


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHC
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE  230 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  230 (269)
                      ++|||+|+..+..++++++++|+++.+|...+     .....+...++.+++++.+++.... .....+.++.+.+++.+
T Consensus       220 ~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  294 (330)
T 1tt7_A          220 GAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKP  294 (330)
T ss_dssp             EEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCC
T ss_pred             EEEECCcHHHHHHHHHhhcCCCEEEEEecCCC-----CccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhc
Confidence            99999999889999999999999999987432     1122344567789999998753222 12234567778888888


Q ss_pred             CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      |++++.++++|+|+++++|++.+.+++..||+|+++
T Consensus       295 g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          295 DQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             SCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             CCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            999888888999999999999999988889999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.3e-37  Score=253.77  Aligned_cols=239  Identities=24%  Similarity=0.289  Sum_probs=199.3

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH   79 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~   79 (269)
                      .++|+..+++|-        ||+|++.   |+|+||++++++.++++ |++++.. ++|++++++.|||+++.+.+ +++
T Consensus        57 ~i~G~e~~G~V~--------GdrV~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~-~~~  125 (302)
T 1iz0_A           57 FIPGMEVVGVVE--------GRRYAALVPQGGLAERVAVPKGALLPL-PEGLSPE-EAAAFPVSFLTAYLALKRAQ-ARP  125 (302)
T ss_dssp             BCCCCEEEEEET--------TEEEEEECSSCCSBSEEEEEGGGCEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHTT-CCT
T ss_pred             CcccceEEEEEE--------CcEEEEecCCcceeeEEEEcHHHcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc-CCC
Confidence            466666666653        9999987   89999999999999999 9985443 47899999999999997677 999


Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCC-hhhHHHHHHHHCCCCccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~-~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+++ . ++.+.+     +++|++|| +|
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~g  197 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-VR  197 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-CS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE-CC
Confidence            999999999999999999999999999999999999999998 899999999876 5 555544     47999999 99


Q ss_pred             chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHH---HHHCCCeee
Q 024337          159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIP---HIKEGKLVY  235 (269)
Q Consensus       159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~  235 (269)
                      +..+..++++++++|+++.+|.....     ....++..++.+++++.++....+ ....+.++++++   ++.+|++++
T Consensus       198 ~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~  271 (302)
T 1iz0_A          198 GKEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRP  271 (302)
T ss_dssp             CTTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCC
T ss_pred             HHHHHHHHHhhccCCEEEEEeCCCCC-----CCCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCccc
Confidence            98899999999999999999875431     112344567889999998875432 223677889999   999999999


Q ss_pred             eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337          236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAV  266 (269)
Q Consensus       236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  266 (269)
                      .++++|+++++++|++.+.+++..||+++++
T Consensus       272 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          272 VVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             CEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             ccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9989999999999999999888889999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=6e-36  Score=251.52  Aligned_cols=239  Identities=17%  Similarity=0.148  Sum_probs=197.7

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEe---------------------------------ccceeeEEEecCCceeecCCCCC
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWG---------------------------------MTGWEEYSLITAPYLFKIQHTDV   51 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~~~~~~~p~~~   51 (269)
                      |++|+|++  ++ +.|++||||++                                 .|+|+||++++++.++++ |+++
T Consensus        67 E~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~~l  142 (366)
T 2cdc_A           67 EAIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKI-PKSI  142 (366)
T ss_dssp             EEEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEE-CGGG
T ss_pred             ceEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEEC-cCCc
Confidence            55666666  66 88999999984                                 278999999999999999 9985


Q ss_pred             CcchhhhhcCCcchhHHHHHH--H--hhcCC--C-------CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH---H
Q 024337           52 PLSYYTGILGMPGMTAYVGFY--E--VCSAK--H-------GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---D  115 (269)
Q Consensus        52 ~~~~~~a~l~~~~~~a~~~l~--~--~~~~~--~-------~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~---~  115 (269)
                      +   +.|+++.++.|||+++.  +  .++++  +       +++|||+|+ |++|++++|+++.+|++|+++++++   +
T Consensus       143 ~---~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~  218 (366)
T 2cdc_A          143 E---DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEV  218 (366)
T ss_dssp             T---TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHH
T ss_pred             c---hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchH
Confidence            4   44678899999999996  3  67898  8       999999999 9999999999999999999999988   8


Q ss_pred             HHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhH-hhhHhhhhcCCEEEEEeccccccCCCCCCcc
Q 024337          116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTL-DAVLPNMKIRGRIAACGMISQYNLDKPEGVH  193 (269)
Q Consensus       116 ~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  193 (269)
                      +.++++ ++|++.+ | .+  ++.+.+.+ +++++|++|||+|. ..+ +.+++.|+++|+++.+|....     .....
T Consensus       219 ~~~~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~  287 (366)
T 2cdc_A          219 EQTVIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTS-----GSVPL  287 (366)
T ss_dssp             HHHHHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCS-----CEEEE
T ss_pred             HHHHHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCC-----Ccccc
Confidence            889998 9999887 7 43  45555555 33589999999998 577 999999999999999987432     11234


Q ss_pred             chHH---HhhcceeeeeeeecccccchHHHHHHHHHHHHCCC------eeeeeehccccccHHHHHHHH-hcCCCcceEE
Q 024337          194 NLMY---LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK------LVYVEDMAEGLESAPAALIGL-FSGQNVGKQV  263 (269)
Q Consensus       194 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~-~~~~~~gkvv  263 (269)
                      +...   ++.+++++.++....     .+.++++++++.+|+      +++.++++|+|+++++|++.+ .+++..+|+|
T Consensus       288 ~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvv  362 (366)
T 2cdc_A          288 DYKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIR  362 (366)
T ss_dssp             EHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEE
T ss_pred             ChhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEE
Confidence            4555   788999999876533     677899999999998      557788899999999999993 3356689999


Q ss_pred             EEec
Q 024337          264 VAVA  267 (269)
Q Consensus       264 v~~~  267 (269)
                      ++++
T Consensus       363 i~~~  366 (366)
T 2cdc_A          363 ILWE  366 (366)
T ss_dssp             EECC
T ss_pred             EecC
Confidence            9874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=7.3e-32  Score=268.06  Aligned_cols=240  Identities=21%  Similarity=0.265  Sum_probs=203.0

Q ss_pred             CCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHH
Q 024337           21 SKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVG   97 (269)
Q Consensus        21 ~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i   97 (269)
                      .+||+|+++   |+|+||+++|.+.++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+||+|++|++++
T Consensus      1608 ~vGdrV~g~~~~G~~Aeyv~vp~~~v~~i-Pd~ls~~-eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAi 1685 (2512)
T 2vz8_A         1608 ASGRRVMGMVPAEGLATSVLLLQHATWEV-PSTWTLE-EAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAI 1685 (2512)
T ss_dssp             TTSCCEEEECSSCCSBSEEECCGGGEEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHH
T ss_pred             ccCCEEEEeecCCceeeEEEcccceEEEe-CCCCCHH-HHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHH
Confidence            489999987   79999999999999999 9985544 578889999999999988899999999999999999999999


Q ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCC
Q 024337           98 QFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRG  173 (269)
Q Consensus        98 ~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G  173 (269)
                      |+||.+|++|++++.++++.+++++.   +|+++++|+++. ++.+.+++.+++ ++|+||||+|+..+..++++++++|
T Consensus      1686 qlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~G 1764 (2512)
T 2vz8_A         1686 AIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHG 1764 (2512)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEE
T ss_pred             HHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCc
Confidence            99999999999999999999999842   678889999887 899999998887 9999999999899999999999999


Q ss_pred             EEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHH
Q 024337          174 RIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAA  249 (269)
Q Consensus       174 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a  249 (269)
                      +++.+|.....     ........++.+++++.++.+..+    +....+.++.+.+.+.+|.+++.+.++|+++++++|
T Consensus      1765 r~V~iG~~~~~-----~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA 1839 (2512)
T 2vz8_A         1765 RFLEIGKFDLS-----NNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAA 1839 (2512)
T ss_dssp             EEEECCCHHHH-----TTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHH
T ss_pred             EEEEeeccccc-----ccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHH
Confidence            99999864321     011112345678888888766443    223445556666667788999988899999999999


Q ss_pred             HHHHhcCCCcceEEEEecC
Q 024337          250 LIGLFSGQNVGKQVVAVAP  268 (269)
Q Consensus       250 ~~~~~~~~~~gkvvv~~~~  268 (269)
                      ++.+.+++..||+|+.+++
T Consensus      1840 ~~~l~~g~~~GKvVi~~~~ 1858 (2512)
T 2vz8_A         1840 FRYMAQGKHIGKVVIQVRE 1858 (2512)
T ss_dssp             HHHHHTTCCSSEEEEECSC
T ss_pred             HHhhhccCccceEEEECCC
Confidence            9999999989999998864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.93  E-value=2.3e-25  Score=171.42  Aligned_cols=191  Identities=22%  Similarity=0.334  Sum_probs=143.1

Q ss_pred             CceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 024337           41 PYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL  120 (269)
Q Consensus        41 ~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~  120 (269)
                      +.++++ |++++.. ++|++++++.|||+++.+.++++++++|+|+||+|++|++++|+++..|++|+++++++++.+.+
T Consensus         2 ~~~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~   79 (198)
T 1pqw_A            2 DLVVPI-PDTLADN-EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML   79 (198)
T ss_dssp             -------------C-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred             CceeEC-CCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467888 9885544 57888899999999997778999999999999999999999999999999999999999998888


Q ss_pred             HHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHh
Q 024337          121 KNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLV  199 (269)
Q Consensus       121 ~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  199 (269)
                      + ++|++.++|+.+. ++.+.+.+.+.+ ++|+++||+|...+..++++++++|+++.+|.....    ......+ ..+
T Consensus        80 ~-~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~-~~~  152 (198)
T 1pqw_A           80 S-RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVY----ADASLGL-AAL  152 (198)
T ss_dssp             H-TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGT----TTCEEEG-GGG
T ss_pred             H-HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCc----CcCcCCh-hHh
Confidence            8 8999888888876 777888877765 899999999988899999999999999999875421    1111222 234


Q ss_pred             hcceeeeeeeecc----cccchHHHHHHHHHHHHCCCeeeeeehc
Q 024337          200 SKRLRMEGFIVLD----HYHLYPKFLEMIIPHIKEGKLVYVEDMA  240 (269)
Q Consensus       200 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~  240 (269)
                      .+++++.++....    ......+.++++++++++|++++.+.++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          153 AKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             TTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             cCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            6777777654310    1112356789999999999998865443

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.15  E-value=5.1e-12  Score=106.92  Aligned_cols=162  Identities=14%  Similarity=0.078  Sum_probs=118.1

Q ss_pred             cceEEEEeccCCCCCCCCCeEEe------------ccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHH
Q 024337            6 GYGVAKVLDSENPEFSKGDLVWG------------MTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE   73 (269)
Q Consensus         6 ~~G~v~~vg~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~   73 (269)
                      ..+.+.++|++++++.+|+.++.            .|++++|+..+...++.+ |++  ++.+.+....++.++|.++..
T Consensus        81 a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~-~k~--v~~~~~~~~~~~s~a~~av~~  157 (404)
T 1gpj_A           81 AVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINL-GKR--AREETRISEGAVSIGSAAVEL  157 (404)
T ss_dssp             HHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH-HHH--HHHHSSTTCSCCSHHHHHHHH
T ss_pred             HhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhh-hcc--CcchhhhcCCCccHHHHHHHH
Confidence            34556668999999999998721            178899988888888988 877  443444456677888888743


Q ss_pred             hhcC---CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHHcCCceeEecCChhhHHHHHHHHCCC
Q 024337           74 VCSA---KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKV-DLLKNKFGFDEAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        74 ~~~~---~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~-~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ..+.   .++++|+|+|+ |++|.++++.++..|+ +|++++++.++. ++++ ++|+. ++++.   ++.+.+.     
T Consensus       158 a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~l~~~l~-----  226 (404)
T 1gpj_A          158 AERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD---ELVDHLA-----  226 (404)
T ss_dssp             HHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG---GHHHHHH-----
T ss_pred             HHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH---hHHHHhc-----
Confidence            3212   58999999998 9999999999999999 999999999887 5565 88875 34332   4444332     


Q ss_pred             CccEEEeCCCc-hhHh--hhHhh--h--hcCCEEEEEecc
Q 024337          149 GIDVYFENVGG-KTLD--AVLPN--M--KIRGRIAACGMI  181 (269)
Q Consensus       149 ~~d~vid~~g~-~~~~--~~~~~--l--~~~G~~v~~g~~  181 (269)
                      ++|+|++|+|. ..+.  ..+..  +  ++++.++.++..
T Consensus       227 ~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          227 RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            58999999986 3222  44554  4  456777777653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.10  E-value=6.3e-10  Score=92.72  Aligned_cols=145  Identities=14%  Similarity=0.069  Sum_probs=97.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +++|+|+|+ |++|+++++.++.+|++|+++++++++.+.++ +++...  +++.+.. ++.+.+.     ++|++|+|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence            489999999 99999999999999999999999999999888 665443  3444333 4444443     599999999


Q ss_pred             Cchh-------HhhhHhhhhcCCEEEEEeccccccCCCC-CCccchHHHhhcceeeeeeeeccc--c-----cchHHHHH
Q 024337          158 GGKT-------LDAVLPNMKIRGRIAACGMISQYNLDKP-EGVHNLMYLVSKRLRMEGFIVLDH--Y-----HLYPKFLE  222 (269)
Q Consensus       158 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~  222 (269)
                      +...       ....++.++++|+++.++...+.++... ....+...+..+++++.+......  +     ...+..++
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~  318 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP  318 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence            8532       5667889999999999987543211110 111222234456677666432111  1     11234567


Q ss_pred             HHHHHHHCCC
Q 024337          223 MIIPHIKEGK  232 (269)
Q Consensus       223 ~~~~~~~~g~  232 (269)
                      .+++++.+|.
T Consensus       319 ~l~~l~~~G~  328 (361)
T 1pjc_A          319 YVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHhCCc
Confidence            8888888773

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.99  E-value=8.2e-09  Score=86.29  Aligned_cols=148  Identities=17%  Similarity=0.123  Sum_probs=92.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....+..+..++.+.+.     ++|++++|+|
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence            4589999999 999999999999999999999999999888874577754344333214444443     4899999998


Q ss_pred             chh-------HhhhHhhhhcCCEEEEEeccccccCCCC-CCccchHHHhhcceeeeeeeeccc--cc-----chHHHHHH
Q 024337          159 GKT-------LDAVLPNMKIRGRIAACGMISQYNLDKP-EGVHNLMYLVSKRLRMEGFIVLDH--YH-----LYPKFLEM  223 (269)
Q Consensus       159 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~  223 (269)
                      ...       .+.+++.|+++|+++.++...+.++... ....+...+..+++++.+.....-  +.     ..++.++.
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            532       5778899999999999886543111111 011122233456666655432111  11     12345677


Q ss_pred             HHHHHHCCC
Q 024337          224 IIPHIKEGK  232 (269)
Q Consensus       224 ~~~~~~~g~  232 (269)
                      +++++.+|.
T Consensus       319 l~~l~~~g~  327 (369)
T 2eez_A          319 VLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhcCh
Confidence            777777764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.98  E-value=5.9e-09  Score=87.30  Aligned_cols=98  Identities=19%  Similarity=0.173  Sum_probs=76.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....+.....++.+.+.     ++|++++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence            5789999998 999999999999999999999999999888874478754333322214444443     4899999997


Q ss_pred             chh-------HhhhHhhhhcCCEEEEEeccc
Q 024337          159 GKT-------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       159 ~~~-------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      ...       ....++.|+++|.++.++...
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence            532       577889999999999998543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.80  E-value=9.9e-09  Score=86.23  Aligned_cols=125  Identities=14%  Similarity=0.127  Sum_probs=84.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-EecCCh--------------hh----HH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEE--------------AD----LN  139 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-~~~~~~--------------~~----~~  139 (269)
                      ++++|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++ ++|+..+ ++..+.              .+    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            6899999998 99999999999999999999999999988888 7998654 232110              00    11


Q ss_pred             HHHHHHCCCCccEEEeCC---Cch---h-HhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337          140 AALKRYFPEGIDVYFENV---GGK---T-LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI  209 (269)
Q Consensus       140 ~~i~~~~~~~~d~vid~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (269)
                      +.+.+... ++|++|+|+   |..   . ....++.|++++.++.++...+......   .....+..+++++.+..
T Consensus       249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~---~~~~~~~~~~v~i~g~~  321 (384)
T 1l7d_A          249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLS---EPGKIVVKHGVKIVGHT  321 (384)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTC---CTTCEEEETTEEEECCS
T ss_pred             HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecc---cCCcEEEECCEEEEEeC
Confidence            22333332 599999999   532   2 2678899999999999986432211110   11112345677777754

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.76  E-value=3.8e-08  Score=84.51  Aligned_cols=105  Identities=18%  Similarity=0.159  Sum_probs=83.0

Q ss_pred             cchhHHHHHHHhh-cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHH
Q 024337           63 PGMTAYVGFYEVC-SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA  141 (269)
Q Consensus        63 ~~~~a~~~l~~~~-~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~  141 (269)
                      ...++|+++.+.. ...+|++|+|+|. |.+|..+++.++.+|++|+++++++.+.+.++ ++|++ +.      ++.+.
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~------~l~e~  326 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VV------TVEEA  326 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHH
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Ee------cHHHH
Confidence            4456677764322 2678999999998 99999999999999999999999999888888 88885 22      22222


Q ss_pred             HHHHCCCCccEEEeCCCc-hhHh-hhHhhhhcCCEEEEEecc
Q 024337          142 LKRYFPEGIDVYFENVGG-KTLD-AVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       142 i~~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~  181 (269)
                      ++     ++|++++|+|. ..+. ..++.|+++|+++.+|..
T Consensus       327 l~-----~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          327 IG-----DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             GG-----GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             Hh-----CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            22     58999999997 4455 788999999999998773

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.69  E-value=1.2e-07  Score=75.59  Aligned_cols=105  Identities=21%  Similarity=0.263  Sum_probs=78.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      +|+.++|+||++|+|.++++.+...|++|+++++++++.+.+.+++|...   ..|..+..+..+.+.+...  |++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999999999999887766887642   3455554222222332221  479999


Q ss_pred             EeCCCch--------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          154 FENVGGK--------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++++|..                          ..+.+++.|+++|++|.++...+
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            9999841                          03567778888999999877654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.65  E-value=9.5e-08  Score=80.50  Aligned_cols=124  Identities=15%  Similarity=0.185  Sum_probs=82.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-EecC-------------ChhhH----HH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYK-------------EEADL----NA  140 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-~~~~-------------~~~~~----~~  140 (269)
                      ++++|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++ ++|+..+ ++..             .. ++    .+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~  247 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME  247 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence            5789999998 99999999999999999999999999988887 8888643 2211             11 11    11


Q ss_pred             HHHHHCCCCccEEEeCC---Cc---hhH-hhhHhhhhcCCEEEEEeccccccCCCCCCccchH-HHhhcceeeeeee
Q 024337          141 ALKRYFPEGIDVYFENV---GG---KTL-DAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLM-YLVSKRLRMEGFI  209 (269)
Q Consensus       141 ~i~~~~~~~~d~vid~~---g~---~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  209 (269)
                      .+.+... ++|++|+|+   |.   ..+ ...++.|++++.++.++...+.+....   .... .+..+++++.+..
T Consensus       248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~---~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYT---VPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTC---CTTSEEECTTSCEEECCS
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcc---cCCCceEEECCEEEEeeC
Confidence            2322222 489999995   31   223 578899999999999986432111111   0001 1346777777754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.62  E-value=1.4e-07  Score=67.91  Aligned_cols=108  Identities=12%  Similarity=0.143  Sum_probs=78.1

Q ss_pred             cchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHH
Q 024337           63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAAL  142 (269)
Q Consensus        63 ~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i  142 (269)
                      +..+++.++. ......+++|+|+|+ |.+|..+++.++..|++|++.++++++.+.+.++++.. +....   ++.+.+
T Consensus         5 ~~sv~~~a~~-~~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYD-IVRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLI   78 (144)
T ss_dssp             CCSHHHHHHH-HHHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHH
T ss_pred             cccHHHHHHH-HHHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHh
Confidence            3466777773 344445999999998 99999999999889999999999999887655488853 22332   344444


Q ss_pred             HHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          143 KRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       143 ~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .     ++|++++|++..........+++++.++.++.+
T Consensus        79 ~-----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           79 K-----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             H-----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             c-----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence            3     489999999973322233678888888887663

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.59  E-value=4.2e-08  Score=77.29  Aligned_cols=100  Identities=11%  Similarity=0.088  Sum_probs=73.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHC-C-
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYF-P-  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~-~-  147 (269)
                      ....+.++++||..|+ | .|..+..+++. +.+|++++.+++..+.+++.+   +...-+..... ++.    +.. . 
T Consensus        85 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~----~~~~~~  156 (248)
T 2yvl_A           85 LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFK----DAEVPE  156 (248)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTT----TSCCCT
T ss_pred             HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chh----hcccCC
Confidence            4567889999999997 5 69999999998 889999999999888887432   43111111111 211    112 2 


Q ss_pred             CCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++||+|+...+.  ..+..+.+.|+++|+++....
T Consensus       157 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          157 GIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             TCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             CcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            379999998874  678899999999999988754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.46  E-value=6.2e-07  Score=74.25  Aligned_cols=105  Identities=16%  Similarity=0.117  Sum_probs=75.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE-e--------cCC---h---hhHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF-N--------YKE---E---ADLNAALK  143 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~-~--------~~~---~---~~~~~~i~  143 (269)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++.+.++ ++|+..+- +        +..   .   ......+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            6789999999 99999999999999999999999999999998 88875321 1        000   0   00111222


Q ss_pred             HHCCCCccEEEeCCCc-----h--hHhhhHhhhhcCCEEEEEeccccccC
Q 024337          144 RYFPEGIDVYFENVGG-----K--TLDAVLPNMKIRGRIAACGMISQYNL  186 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~  186 (269)
                      +.. .++|+||.|+..     .  .-...++.|++++.++.++...+.++
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~  309 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC  309 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence            222 259999998631     1  24688999999999999987655433

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.44  E-value=1.2e-06  Score=69.38  Aligned_cols=105  Identities=13%  Similarity=0.160  Sum_probs=74.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+....+.+..  -+++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999999998877765665432   234444312222222221  1379999


Q ss_pred             EeCCCch--------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          154 FENVGGK--------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++++|..                          ..+.+++.++++|++|.++....
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            9999741                          02345556667899999877554

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.41  E-value=3.4e-06  Score=66.16  Aligned_cols=104  Identities=12%  Similarity=0.009  Sum_probs=71.8

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      +++|||+||++|+|.++++.+...|++|+++++++++.+.+.++.+-..  ..|..+..+..+.+.+...  +++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999999999999999999998887763333222  2355544223332322221  37999999


Q ss_pred             CCCch---h-----------------------HhhhHhhhh-cCCEEEEEecccc
Q 024337          156 NVGGK---T-----------------------LDAVLPNMK-IRGRIAACGMISQ  183 (269)
Q Consensus       156 ~~g~~---~-----------------------~~~~~~~l~-~~G~~v~~g~~~~  183 (269)
                      ++|..   .                       .+.+++.|. .+|++|.++...+
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            99731   1                       234455554 4799999877654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.40  E-value=3e-06  Score=66.76  Aligned_cols=105  Identities=17%  Similarity=0.255  Sum_probs=73.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+...++   .|...   ..|..++.+..+.+.+..  -+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            589999999999999999999999999999999998876554333   34332   245555423333333332  2379


Q ss_pred             cEEEeCCCch---h-----------------------HhhhHhhhh---cCCEEEEEecccc
Q 024337          151 DVYFENVGGK---T-----------------------LDAVLPNMK---IRGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~~---~-----------------------~~~~~~~l~---~~G~~v~~g~~~~  183 (269)
                      |++++++|..   .                       .+.+++.|.   .+|++|.++....
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~  149 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS  149 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence            9999999841   1                       245666662   3689999987654

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.38  E-value=4.2e-06  Score=65.92  Aligned_cols=105  Identities=22%  Similarity=0.335  Sum_probs=73.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.++   .|...   ..|..+..+....+.+...  +++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999999887655433   34432   3455554233322322221  479


Q ss_pred             cEEEeCCCc--h--h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          151 DVYFENVGG--K--T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~--~--~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      |++++++|.  .  .                       .+.+++.|.+  +|++|.++...+
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g  147 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG  147 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence            999999983  1  1                       2456666643  689999987654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.37  E-value=3.6e-06  Score=70.26  Aligned_cols=102  Identities=16%  Similarity=0.177  Sum_probs=73.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE-e------------cCC--hhhH----H
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF-N------------YKE--EADL----N  139 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~-~------------~~~--~~~~----~  139 (269)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++.++++++.+.++ ++|...+- +            +..  .+++    .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            5789999999 99999999999999999999999999999998 78875321 1            110  0011    1


Q ss_pred             HHHHHHCCCCccEEEeCCC--c-----hhHhhhHhhhhcCCEEEEEecccc
Q 024337          140 AALKRYFPEGIDVYFENVG--G-----KTLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       140 ~~i~~~~~~~~d~vid~~g--~-----~~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ..+.+... +.|+||.|+.  +     -.-+..++.|++++.+|.++...+
T Consensus       267 ~~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~G  316 (405)
T 4dio_A          267 ALVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERG  316 (405)
T ss_dssp             HHHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGT
T ss_pred             hHHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCC
Confidence            12222211 5899999963  1     134688999999999999986444

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.33  E-value=4.6e-06  Score=66.75  Aligned_cols=102  Identities=19%  Similarity=0.306  Sum_probs=72.1

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....+.++++||-.|+ |. |..+..+++..  +.+|++++.+++..+.+++.+   +...-+..... ++.+.   ..+
T Consensus       106 ~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~  179 (277)
T 1o54_A          106 MMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---FDE  179 (277)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---CSC
T ss_pred             HHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---ccC
Confidence            4567889999999997 44 88899999885  469999999999888877433   44211221111 22111   122


Q ss_pred             CCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.||+|+...+.  ..+..+.+.|+++|+++....
T Consensus       180 ~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          180 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            379999987764  678889999999999988644

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.33  E-value=6.1e-06  Score=56.74  Aligned_cols=93  Identities=15%  Similarity=0.170  Sum_probs=64.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|++|+|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~   76 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISA   76 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEEC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence            3578999999 999999999999999 79999999999888877 666543 3344332    23333332 69999999


Q ss_pred             CCchhHhhhHhh-hhcCCEEEEE
Q 024337          157 VGGKTLDAVLPN-MKIRGRIAAC  178 (269)
Q Consensus       157 ~g~~~~~~~~~~-l~~~G~~v~~  178 (269)
                      +|........+. .+.+-+++.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           77 APFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCchhhHHHHHHHHHhCCCEEEe
Confidence            986433333333 4445555543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.31  E-value=6.3e-06  Score=65.58  Aligned_cols=81  Identities=21%  Similarity=0.333  Sum_probs=59.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999988777665776542   2344443122222322211  379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.31  E-value=6.8e-06  Score=65.07  Aligned_cols=81  Identities=14%  Similarity=0.236  Sum_probs=59.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      .++++||+||++++|..+++.+...|++|++++++.++.+.+.++++...   ..|..+..+..+.+.+..  -+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999988777665665432   235555422333333221  1379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.29  E-value=7.8e-06  Score=64.91  Aligned_cols=81  Identities=9%  Similarity=0.123  Sum_probs=58.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            46899999999999999999999999999999999988777654554321   2355543223333332211  368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            999983

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.29  E-value=6.1e-06  Score=66.06  Aligned_cols=81  Identities=21%  Similarity=0.329  Sum_probs=59.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999988877665665432   2355554222222322211  379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.28  E-value=1.8e-06  Score=67.32  Aligned_cols=102  Identities=19%  Similarity=0.220  Sum_probs=71.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+... .-.. ....|..+. +..+.+.+.. +++|++++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~-~~v~~~~~~~-g~iDiLVNNA   86 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDS-QRLQRLFEAL-PRLDVLVNNA   86 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCH-HHHHHHHHhc-CCCCEEEECC
Confidence            6899999999999999999999999999999999877654322 1111 123455554 3333333333 4799999999


Q ss_pred             Cc-hh-----------------------HhhhHhhhh-cCCEEEEEecccc
Q 024337          158 GG-KT-----------------------LDAVLPNMK-IRGRIAACGMISQ  183 (269)
Q Consensus       158 g~-~~-----------------------~~~~~~~l~-~~G~~v~~g~~~~  183 (269)
                      |- ..                       .+.+++.|+ .+|++|.++...+
T Consensus        87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            83 11                       244566665 4799999987654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.27  E-value=3.1e-06  Score=67.79  Aligned_cols=101  Identities=15%  Similarity=0.098  Sum_probs=73.2

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCCCc
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .++++++++||..|+ |..|+.++.+++..|++|++++.+++..+.+++.   .|.+. +..... +..+    ..++.|
T Consensus       117 la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~-v~~v~g-Da~~----l~d~~F  189 (298)
T 3fpf_A          117 LGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDG-VNVITG-DETV----IDGLEF  189 (298)
T ss_dssp             HTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCS-EEEEES-CGGG----GGGCCC
T ss_pred             HcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCC-eEEEEC-chhh----CCCCCc
Confidence            467899999999997 7667777778888899999999999998888743   35422 111111 1111    123489


Q ss_pred             cEEEeCCCc----hhHhhhHhhhhcCCEEEEEecc
Q 024337          151 DVYFENVGG----KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       151 d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |+|+.....    ..+..+.+.|+++|+++.....
T Consensus       190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            999876553    5688999999999999987643

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.25  E-value=7.1e-06  Score=64.90  Aligned_cols=105  Identities=11%  Similarity=0.128  Sum_probs=70.7

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc--e--eEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD--E--AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~--~--~~~~~~~~~~~~~i~~~~~--  147 (269)
                      +|++++|+||+|  |+|.++++.+...|++|++++++++..+.+.+   +++..  .  ..|..+..+..+.+.+...  
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            589999999876  89999999999999999999999876655542   33331  1  3455554233333332221  


Q ss_pred             CCccEEEeCCCc---hh---------------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          148 EGIDVYFENVGG---KT---------------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       148 ~~~d~vid~~g~---~~---------------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +++|++++++|.   ..                           .+.....++.+|++|.++...+
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            479999999873   10                           1223445667899999987654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.22  E-value=6.9e-06  Score=64.56  Aligned_cols=81  Identities=20%  Similarity=0.321  Sum_probs=59.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCCCCccEE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      -.++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+.+....   ..|..+..++.+.+.+.  +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence            4578999999999999999999999999999999999998877765665432   23444331222223222  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        89 i~~Ag~   94 (249)
T 3f9i_A           89 VCNAGI   94 (249)
T ss_dssp             EECCC-
T ss_pred             EECCCC
Confidence            999983

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.21  E-value=9.4e-06  Score=64.29  Aligned_cols=80  Identities=16%  Similarity=0.268  Sum_probs=56.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc-e--eEecCChhhHHHHHHHHCCC-C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYFPE-G  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~i~~~~~~-~  149 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++     +.. .  ..|..+..++...+.+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999999999988766544333     211 1  23555542333333333222 4


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|+++|
T Consensus        86 id~lv~~Ag   94 (260)
T 2z1n_A           86 ADILVYSTG   94 (260)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.20  E-value=7.6e-06  Score=64.24  Aligned_cols=80  Identities=13%  Similarity=0.196  Sum_probs=58.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++... ..|..+..++.+.+.+...  +++|++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999999888776654556422 2455554233333332211  36999999


Q ss_pred             CCC
Q 024337          156 NVG  158 (269)
Q Consensus       156 ~~g  158 (269)
                      ++|
T Consensus        84 ~Ag   86 (245)
T 1uls_A           84 YAG   86 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            998

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.20  E-value=7.2e-06  Score=64.47  Aligned_cols=81  Identities=16%  Similarity=0.234  Sum_probs=59.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            47899999999999999999999999999999999988877665666532   2355544223333332211  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.19  E-value=1.2e-05  Score=67.34  Aligned_cols=102  Identities=19%  Similarity=0.177  Sum_probs=76.2

Q ss_pred             hHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHH
Q 024337           66 TAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR  144 (269)
Q Consensus        66 ~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~  144 (269)
                      ..+.++.+..+ .-.|++++|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|.. +.      ++.+.+. 
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~-v~------~Leeal~-  274 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFR-LV------KLNEVIR-  274 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT-
T ss_pred             HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCE-ec------cHHHHHh-
Confidence            34444533332 457999999998 99999999999999999999998887766666 66653 11      3333332 


Q ss_pred             HCCCCccEEEeCCCc-hhHh-hhHhhhhcCCEEEEEecc
Q 024337          145 YFPEGIDVYFENVGG-KTLD-AVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       145 ~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~  181 (269)
                          ..|+++.|.|. ..+. ..++.|++++.++.++..
T Consensus       275 ----~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg  309 (435)
T 3gvp_A          275 ----QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHS  309 (435)
T ss_dssp             ----TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred             ----cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence                48999999886 4454 788999999999998764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.18  E-value=1.7e-05  Score=64.28  Aligned_cols=80  Identities=20%  Similarity=0.334  Sum_probs=57.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++.+.+.+...  +++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999999988876654333   3321   3455554233333332211  379


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|+++|
T Consensus       110 d~lvnnAg  117 (301)
T 3tjr_A          110 DVVFSNAG  117 (301)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.17  E-value=1.3e-05  Score=64.68  Aligned_cols=79  Identities=15%  Similarity=0.189  Sum_probs=59.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+.  +++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            57899999999999999999999999999999999998887764655422   23555441233333333  47999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        93 nAg~   96 (291)
T 3rd5_A           93 NAGI   96 (291)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9983

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.16  E-value=2.2e-05  Score=62.34  Aligned_cols=105  Identities=15%  Similarity=0.173  Sum_probs=68.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-----c-e--eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-----D-E--AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-----~-~--~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..     . .  ..|..+..++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998776544323321     1 1  2354443233333332211  3


Q ss_pred             CccEEEeCCCc---hh---------------HhhhHhhhhc-----CCEEEEEecccc
Q 024337          149 GIDVYFENVGG---KT---------------LDAVLPNMKI-----RGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  183 (269)
                      ++|++++++|.   +.               .+.+++.+++     .|++|.++....
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            68999999983   11               1234444543     589998876554

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.16  E-value=1.4e-05  Score=63.18  Aligned_cols=105  Identities=14%  Similarity=0.176  Sum_probs=70.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HcCCce---eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN--KFGFDE---AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~--~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+++  +.+...   ..|..+..+..+.+.+...  +++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999987665433321  334321   3455554233333332221  4799


Q ss_pred             EEEeCCCch-------------------------hHhhhHhhhhc-CCEEEEEecccc
Q 024337          152 VYFENVGGK-------------------------TLDAVLPNMKI-RGRIAACGMISQ  183 (269)
Q Consensus       152 ~vid~~g~~-------------------------~~~~~~~~l~~-~G~~v~~g~~~~  183 (269)
                      ++++++|-.                         ..+.+++.|+. +|++|.++...+
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            999999831                         02445556654 799999987554

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.16  E-value=1.4e-05  Score=62.50  Aligned_cols=100  Identities=19%  Similarity=0.287  Sum_probs=69.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCce---eEecCChhhHHHHHHHHC-CCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF-PEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~-~~~~d~  152 (269)
                      +|++++|+||++|+|.++++.+...|++|++++++.  +..+.++ +.|...   ..|..++ +.   +++.. .+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~~---v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-LA---AKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-TT---TTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-HH---HHHHHHhCCCCE
Confidence            589999999999999999999999999999999874  3445555 666542   2344332 21   22222 248999


Q ss_pred             EEeCCCch---h-----------------------HhhhHhhhh---cCCEEEEEecccc
Q 024337          153 YFENVGGK---T-----------------------LDAVLPNMK---IRGRIAACGMISQ  183 (269)
Q Consensus       153 vid~~g~~---~-----------------------~~~~~~~l~---~~G~~v~~g~~~~  183 (269)
                      +++++|..   .                       .+.+++.|.   .+|++|.++...+
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~  142 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh
Confidence            99999841   0                       244555553   3589999987654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.15  E-value=1.1e-05  Score=63.81  Aligned_cols=81  Identities=22%  Similarity=0.289  Sum_probs=59.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46899999999999999999999999999999999998887765666532   2344443123333332211  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999883

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.15  E-value=1.8e-05  Score=63.55  Aligned_cols=104  Identities=19%  Similarity=0.291  Sum_probs=68.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHH----HHHHcCCce---eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDL----LKNKFGFDE---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~----~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++.++ .+.    ++ +.+...   ..|..+..++...+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999987543 222    23 334332   2344443123332322211  3


Q ss_pred             CccEEEeCCCch--------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          149 GIDVYFENVGGK--------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++|++++++|..                          ..+.+++.|+.+|++|.++....
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            699999999831                          02344555556799999987554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.14  E-value=1.6e-05  Score=63.21  Aligned_cols=80  Identities=14%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+|++|..+++.+.. .|++|++++++.++.+.+.+++   +.. .  ..|..+..++...+.+...  ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999888 8999999999987665443233   322 1  2344443133333332211  36


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|+++|
T Consensus        83 id~li~~Ag   91 (276)
T 1wma_A           83 LDVLVNNAG   91 (276)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999997

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.14  E-value=1.7e-05  Score=64.85  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=56.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--c---eeEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF--D---EAFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~--~---~~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      .++++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+   +.  .   ...|..+..++...+.+..  -+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999988776554332   32  1   1335555423333333221  13


Q ss_pred             CccEEEeCCC
Q 024337          149 GIDVYFENVG  158 (269)
Q Consensus       149 ~~d~vid~~g  158 (269)
                      ++|++|+++|
T Consensus        87 ~id~lv~nAg   96 (319)
T 3ioy_A           87 PVSILCNNAG   96 (319)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.14  E-value=8.8e-06  Score=64.01  Aligned_cols=81  Identities=23%  Similarity=0.421  Sum_probs=59.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      ++++++|+||++++|..+++.+...|++|+++++++++.+.+.+.++..   ...|..+..+..+.+.+...  +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999998877765455432   23455554233333332211  379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.14  E-value=1.2e-05  Score=64.27  Aligned_cols=105  Identities=18%  Similarity=0.276  Sum_probs=73.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|.++++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999988777665666532   2455554233332332211  369999


Q ss_pred             EeCCCch-----------h---------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          154 FENVGGK-----------T---------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++++|..           .               .+.+++.+++  +|++|.++....
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  163 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA  163 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence            9999831           0               2344555554  579998876554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.14  E-value=1.6e-05  Score=63.57  Aligned_cols=81  Identities=22%  Similarity=0.372  Sum_probs=55.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCC-c--e--eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGF-D--E--AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~-~--~--~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      +++++||+||+|++|..+++.+...|++|++++++.++.+.+.++   .+. .  .  ..|..+..++.+.+.+...  +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999998776554322   232 1  1  2344443233333332211  3


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++|+++|.
T Consensus       111 ~iD~vi~~Ag~  121 (279)
T 1xg5_A          111 GVDICINNAGL  121 (279)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.14  E-value=8.7e-06  Score=63.50  Aligned_cols=80  Identities=10%  Similarity=0.050  Sum_probs=57.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      +++++|+||++++|..+++.+...|++|+++++++++.+.+.+.++..   ...|..+..+....+.+..  .+++|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            578999999999999999999999999999999998887766455432   1234444323333333221  13799999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +++|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99984

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.12  E-value=2.9e-05  Score=61.88  Aligned_cols=104  Identities=15%  Similarity=0.261  Sum_probs=68.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|.++++.+...|++|++++++ .++.+.+.+   ..+...   ..|..+..+..+.+.+...  ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999998654 344443322   334432   2344443233333332221  37


Q ss_pred             ccEEEeCCCch--------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGGK--------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++++++|..                          ..+.+++.|+++|++|.++...
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            99999999831                          0244556666789999987643

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.12  E-value=1.3e-05  Score=64.30  Aligned_cols=81  Identities=20%  Similarity=0.219  Sum_probs=59.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|.++++.+...|++|++++++.++.+.+.+.++...   ..|..+..+....+.+...  +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            46899999999999999999999999999999999998877765665432   2355543233333332211  379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999983

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.12  E-value=1.1e-05  Score=63.63  Aligned_cols=81  Identities=17%  Similarity=0.168  Sum_probs=58.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+++...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999999999888776654554321   2355543233333332211  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.12  E-value=2.2e-05  Score=63.36  Aligned_cols=92  Identities=22%  Similarity=0.290  Sum_probs=71.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -++++|+|+|+ |.+|..+++.++.+|++|++.+++.++.+.+. ++|+. .++..   ++.+.+.     ..|+|+.++
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~~---~l~~~l~-----~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHIS---KAAQELR-----DVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEGG---GHHHHTT-----TCSEEEECC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecChh---hHHHHhc-----CCCEEEECC
Confidence            36899999998 99999999999999999999999988877776 77764 33321   3333332     589999999


Q ss_pred             Cchh-HhhhHhhhhcCCEEEEEec
Q 024337          158 GGKT-LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~~~-~~~~~~~l~~~G~~v~~g~  180 (269)
                      +... -...+..+++++.++.++.
T Consensus       222 p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          222 PALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             SSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             ChHHhCHHHHHhcCCCCEEEEecC
Confidence            8633 2456778999999998875

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.11  E-value=2.1e-05  Score=63.78  Aligned_cols=82  Identities=13%  Similarity=0.169  Sum_probs=55.1

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-c-e--eEecCCh-hhHHHHHHHHC--C
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-D-E--AFNYKEE-ADLNAALKRYF--P  147 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~-~-~--~~~~~~~-~~~~~~i~~~~--~  147 (269)
                      ..+++++|+||++++|..+++.+...|++|++++++.++.+.+.+++   +. . .  ..|..+. ......+....  -
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999988765543333   21 1 1  2344432 12222222221  1


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++|+++|.
T Consensus        90 g~iD~lv~nAg~  101 (311)
T 3o26_A           90 GKLDILVNNAGV  101 (311)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999983

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.11  E-value=3.3e-05  Score=60.94  Aligned_cols=79  Identities=15%  Similarity=0.197  Sum_probs=55.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      +++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++.+.+.+..  -+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999999988765543233   3321   235554323333333221  13799


Q ss_pred             EEEeCCC
Q 024337          152 VYFENVG  158 (269)
Q Consensus       152 ~vid~~g  158 (269)
                      ++|+++|
T Consensus        82 ~lv~nAg   88 (256)
T 1geg_A           82 VIVNNAG   88 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999997

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.10  E-value=1.2e-05  Score=64.13  Aligned_cols=81  Identities=19%  Similarity=0.217  Sum_probs=58.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .++++||+||++++|..+++.+...|++|++++++.++.+.+.++++...   ..|..+..+....+.+...  +++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999988877665665421   2355554233333332211  379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus       107 VnnAg~  112 (272)
T 4dyv_A          107 FNNAGT  112 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.09  E-value=1.5e-05  Score=62.95  Aligned_cols=80  Identities=18%  Similarity=0.244  Sum_probs=57.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---c---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---D---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +++++||+||++++|.++++.+...|++|+++++++++.+.+.+++..   .   ...|..+..+..+.+.+...  +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999999887776545432   1   12355554233333332211  379


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++++++|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.09  E-value=5.1e-05  Score=59.30  Aligned_cols=79  Identities=16%  Similarity=0.148  Sum_probs=56.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee--EecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.....  .|..+. +..+.+.+ .-+++|++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~-~~~~id~vi~~   83 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALG-SVGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHT-TCCCCCEEEEC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-HHHHHHHH-HcCCCCEEEEC
Confidence            478999999999999999999999999999999998877765534432222  344443 22222222 11369999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        84 Ag~   86 (244)
T 3d3w_A           84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            983

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.09  E-value=3.1e-05  Score=62.36  Aligned_cols=104  Identities=16%  Similarity=0.199  Sum_probs=68.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +++++||+||++++|..+++.+...|++|++++++.++ .+.+.+   +.+...   ..|..+..+..+.+.+...  ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999987653 222221   334332   2355543122332332211  36


Q ss_pred             ccEEEeCCCc----hh-----------------------HhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGG----KT-----------------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~----~~-----------------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++++++|.    ..                       .+.+++.++++|++|.++...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence            9999999873    10                       234555666789999887644

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.08  E-value=8.1e-06  Score=65.50  Aligned_cols=81  Identities=17%  Similarity=0.240  Sum_probs=55.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----Cc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----FD-E--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g----~~-~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .++++||+||++++|.++++.+...|++|+++++++++.+.+.+++.    .. .  ..|..+..+..+.+.+...  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887665543331    11 1  2455554223333322211  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.08  E-value=1.1e-05  Score=64.30  Aligned_cols=81  Identities=15%  Similarity=0.177  Sum_probs=59.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999999888776655666432   3455554233333332211  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.08  E-value=3.7e-05  Score=60.77  Aligned_cols=105  Identities=17%  Similarity=0.244  Sum_probs=69.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +++++||+||++++|..+++.+...|++|+++ .+++++.+.+.+++   +...   ..|..+..+..+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 78877665544333   3322   2355544223333332211  36


Q ss_pred             ccEEEeCCCc---hh-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          150 IDVYFENVGG---KT-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       150 ~d~vid~~g~---~~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      +|++++++|.   ..                       .+.+++.|+.  +|++|.++....
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  144 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS  144 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            9999999973   10                       2334455544  579999887554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.08  E-value=3.9e-05  Score=60.24  Aligned_cols=81  Identities=12%  Similarity=0.135  Sum_probs=56.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c-e--eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..  . .  ..|..+..++.+.+.+...  +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999998877665434432  1 1  2344443123333332211  3699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|+++|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999983

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.07  E-value=3e-05  Score=61.75  Aligned_cols=104  Identities=15%  Similarity=0.243  Sum_probs=68.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .++++||+||++++|.++++.+...|++|+++++ +.++.+.+.+   ..+...   ..|..+..+..+.+.+...  ++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999775 4444433322   334332   2354443233333333211  36


Q ss_pred             ccEEEeCCCch--------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGGK--------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++++++|..                          ..+.+++.++++|++|.++...
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            99999999841                          0245666677789999987754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.07  E-value=1.7e-05  Score=62.99  Aligned_cols=105  Identities=22%  Similarity=0.360  Sum_probs=70.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+....+.+...  +++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988776654333   3321   2455554233333332211  369


Q ss_pred             cEEEeCCCch---h-----------------------HhhhHhhhh--cCCEEEEEecccc
Q 024337          151 DVYFENVGGK---T-----------------------LDAVLPNMK--IRGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~~---~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  183 (269)
                      |++++++|..   .                       .+.+++.|+  .+|++|.++....
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  143 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA  143 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH
Confidence            9999999831   0                       123444443  3689999887554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.07  E-value=4.2e-05  Score=58.87  Aligned_cols=96  Identities=9%  Similarity=0.073  Sum_probs=65.6

Q ss_pred             CEEEEecCcchHHHHHHHHHH-HcCCEEEEEeCCHH-HHHHHHHHcCCc-e--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           81 ECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKD-KVDLLKNKFGFD-E--AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~-~~G~~V~~~~~s~~-~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ++|+|+||+|++|..+++.+. ..|++|++++++++ +.+.+. ..+.. .  ..|..+. +   .+.+.. .++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~-~---~~~~~~-~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNP-G---XLEQAV-TNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCH-H---HHHHHH-TTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCH-H---HHHHHH-cCCCEEEE
Confidence            569999999999999999888 89999999999988 665553 22322 2  2344443 2   222222 25899999


Q ss_pred             CCCchh--HhhhHhhhhcC--CEEEEEeccc
Q 024337          156 NVGGKT--LDAVLPNMKIR--GRIAACGMIS  182 (269)
Q Consensus       156 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~  182 (269)
                      ++|...  ....++.++..  +++|.++...
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            999622  44555555543  5899887654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.06  E-value=4.6e-05  Score=61.10  Aligned_cols=104  Identities=16%  Similarity=0.195  Sum_probs=68.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCce---eEecCChhhHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEADLNA  140 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~  140 (269)
                      .++++||+||++++|..+++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+..+..+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            47899999999999999999999999999999876            444443321   333322   235555423333


Q ss_pred             HHHHHCC--CCccEEEeCCCch------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          141 ALKRYFP--EGIDVYFENVGGK------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       141 ~i~~~~~--~~~d~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      .+.+...  +++|++++++|..                        ..+.+++.+..+|+++.++...
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            3332221  3799999999841                        0234555666789999887643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.06  E-value=2.3e-05  Score=62.29  Aligned_cols=81  Identities=16%  Similarity=0.239  Sum_probs=56.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++    +...   ..|..+..++...+.+...  ++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999988765543233    5432   2355554233333332211  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus       100 iD~lvnnAg~  109 (267)
T 1vl8_A          100 LDTVVNAAGI  109 (267)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.05  E-value=1.3e-05  Score=58.20  Aligned_cols=92  Identities=18%  Similarity=0.148  Sum_probs=61.3

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ...++++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.+++..|.. ++..+.. + .+.+.+....++|++|.
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVFA   90 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEEE
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEEE
Confidence            3457889999998 99999999999999999999999988776654234443 3333221 2 22233321126999999


Q ss_pred             CCCc-hhHhhhHhhhhc
Q 024337          156 NVGG-KTLDAVLPNMKI  171 (269)
Q Consensus       156 ~~g~-~~~~~~~~~l~~  171 (269)
                      |++. .....+...++.
T Consensus        91 ~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           91 FTNDDSTNFFISMNARY  107 (155)
T ss_dssp             CSSCHHHHHHHHHHHHH
T ss_pred             EeCCcHHHHHHHHHHHH
Confidence            9997 333444444444

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.05  E-value=2.3e-05  Score=62.61  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=56.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhh---HHHHHHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEAD---LNAALKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~---~~~~i~~~~~~~  149 (269)
                      .+++++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+   +.+.+.+.  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence            5789999999999999999999999999999999877655443232   3321   234444312   22333333  57


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       110 iD~lvnnAg~  119 (275)
T 4imr_A          110 VDILVINASA  119 (275)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.05  E-value=2.4e-05  Score=60.72  Aligned_cols=77  Identities=14%  Similarity=0.121  Sum_probs=56.8

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      ++++|+||++++|..+++.+...|++|+++++++++.+.+.++++..   ...|..+. +..+.+.+.....+|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH-QEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH-HHHHHHHHSCSSCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH-HHHHHHHHHHhhcCCEEEEeC
Confidence            46899999999999999999999999999999999888776566432   13455554 333333333333569999999


Q ss_pred             C
Q 024337          158 G  158 (269)
Q Consensus       158 g  158 (269)
                      |
T Consensus        81 g   81 (230)
T 3guy_A           81 G   81 (230)
T ss_dssp             C
T ss_pred             C
Confidence            8

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.05  E-value=2.7e-05  Score=61.19  Aligned_cols=80  Identities=21%  Similarity=0.377  Sum_probs=56.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+....+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988766554333   4321   2355554233333332211  369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (247)
T 2jah_A           86 DILVNNAG   93 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.04  E-value=2.6e-05  Score=62.02  Aligned_cols=80  Identities=18%  Similarity=0.213  Sum_probs=56.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCce---eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++     +...   ..|..+..++.+.+.+...  +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999988766543232     3321   2355554233333332211  3


Q ss_pred             CccEEEeCCC
Q 024337          149 GIDVYFENVG  158 (269)
Q Consensus       149 ~~d~vid~~g  158 (269)
                      ++|++++++|
T Consensus        92 ~id~lv~nAg  101 (267)
T 1iy8_A           92 RIDGFFNNAG  101 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999997

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.04  E-value=1.9e-05  Score=62.22  Aligned_cols=81  Identities=19%  Similarity=0.183  Sum_probs=58.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..++...+.+..  -+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999999999888776654655432   234444313333333221  1368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.04  E-value=2.4e-05  Score=62.47  Aligned_cols=81  Identities=10%  Similarity=0.075  Sum_probs=54.9

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCce--eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      .+++++|+||+  |++|..+++.+...|++|++++++++   ..+.+.+..+...  ..|..+..+....+.+..  -++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999998  99999999999999999999998865   3444442334222  245555422333333221  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        85 id~lv~nAg~   94 (275)
T 2pd4_A           85 LDFIVHSVAF   94 (275)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999983

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.03  E-value=4e-05  Score=60.80  Aligned_cols=105  Identities=10%  Similarity=0.111  Sum_probs=68.6

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCC-c---eeEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK---NKFGF-D---EAFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~---~~~g~-~---~~~~~~~~~~~~~~i~~~~~--  147 (269)
                      .+++++|+||+|  |+|..+++.+...|++|++++++++..+.+.   ++++. .   ...|..+..++.+.+.+...  
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            478999999994  5999999999999999999998865444333   13332 1   13455554233333333221  


Q ss_pred             CCccEEEeCCCc-h-----------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          148 EGIDVYFENVGG-K-----------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       148 ~~~d~vid~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +++|++++++|. .                             ..+.++..++++|++|.++....
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence            369999999873 1                             12345556667899999987554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.03  E-value=2.8e-05  Score=61.60  Aligned_cols=81  Identities=19%  Similarity=0.276  Sum_probs=56.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++    +...   ..|..+..++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999988765543233    4321   2355544233333332211  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.03  E-value=2.3e-05  Score=62.01  Aligned_cols=105  Identities=19%  Similarity=0.231  Sum_probs=67.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|.++++.+...|++|+++ .++.++.+...+   +.+...   ..|..+..+....+.+...  ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999998 444444333322   334321   2355554233333332211  37


Q ss_pred             ccEEEeCCCch----h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          150 IDVYFENVGGK----T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       150 ~d~vid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +|++++++|..    .                       .+.+++.++++|++|.++....
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~  147 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG  147 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh
Confidence            99999999731    0                       2344555666889999876543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.03  E-value=2.6e-05  Score=61.35  Aligned_cols=81  Identities=15%  Similarity=0.206  Sum_probs=57.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C-Cc-e--eEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----G-FD-E--AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g-~~-~--~~~~~~~~~~~~~i~~~~~--  147 (269)
                      .+++++|+||++++|.++++.+...|++|+++++++++.+.+.+++     + .. .  ..|..+..+..+.+.+...  
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999999988776654333     2 11 1  2355553233333332211  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        86 g~iD~lvnnAg~   97 (250)
T 3nyw_A           86 GAVDILVNAAAM   97 (250)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999984

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.03  E-value=4e-05  Score=61.33  Aligned_cols=82  Identities=18%  Similarity=0.236  Sum_probs=55.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHH---cCCce---eEecCChhhH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-------------SKDKVDLLKNK---FGFDE---AFNYKEEADL  138 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-------------s~~~~~~~~~~---~g~~~---~~~~~~~~~~  138 (269)
                      -.+++++|+||++++|..+++.+...|++|+++++             ++++.+.+.+.   .+...   ..|..+..+.
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            35789999999999999999999999999999987             56655544322   23321   2355554233


Q ss_pred             HHHHHHHCC--CCccEEEeCCCc
Q 024337          139 NAALKRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       139 ~~~i~~~~~--~~~d~vid~~g~  159 (269)
                      .+.+.+...  +++|++++++|.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            333332211  379999999983

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.03  E-value=2.2e-05  Score=61.80  Aligned_cols=81  Identities=12%  Similarity=0.186  Sum_probs=57.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce----eEecCChhhHHHHHHHHC-CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEADLNAALKRYF-PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~~-~~~~d~v  153 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...    ..|..+..++.+.+.+.. -+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            46899999999999999999999999999999999887766554554321    234444312222222211 1469999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |+++|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999983

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.03  E-value=1.2e-05  Score=62.11  Aligned_cols=89  Identities=9%  Similarity=0.087  Sum_probs=63.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+++++|+||++++|..+++.+...|++|++++++.+              .|..+..+..+.+++.  +++|++++++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            4678999999999999999999989999999987644              2344431333334443  46999999988


Q ss_pred             ch---------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          159 GK---------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       159 ~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ..                           ..+.+++.++++|+++.++....
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            31                           12345556667899999876554

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.03  E-value=3.2e-05  Score=60.79  Aligned_cols=78  Identities=18%  Similarity=0.328  Sum_probs=57.3

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..++.+.+.+...  +++|++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            368999999999999999999999999999999888776654665321   2355554233333443332  37999999


Q ss_pred             CCC
Q 024337          156 NVG  158 (269)
Q Consensus       156 ~~g  158 (269)
                      ++|
T Consensus        81 nAg   83 (248)
T 3asu_A           81 NAG   83 (248)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            997

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.02  E-value=3.8e-05  Score=62.13  Aligned_cols=92  Identities=23%  Similarity=0.328  Sum_probs=71.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -++++++|+|+ |.+|..+++.++.+|++|++.+++.++.+.+. ++|.. .++..   ++.+.++     +.|+|+.++
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~~---~l~~~l~-----~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHTD---ELKEHVK-----DIDICINTI  223 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEGG---GHHHHST-----TCSEEEECC
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEchh---hHHHHhh-----CCCEEEECC
Confidence            36899999998 99999999999999999999999988877776 67763 33321   3333222     589999999


Q ss_pred             CchhH-hhhHhhhhcCCEEEEEec
Q 024337          158 GGKTL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~~~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      +...+ ...+..+++++.++.++.
T Consensus       224 p~~~i~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          224 PSMILNQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             SSCCBCHHHHTTSCTTCEEEECSS
T ss_pred             ChhhhCHHHHHhCCCCCEEEEEeC
Confidence            96332 456778999999998876

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.02  E-value=2.9e-05  Score=62.06  Aligned_cols=81  Identities=15%  Similarity=0.251  Sum_probs=56.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+..  -+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999988765543233   4321   235554323333233221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.02  E-value=2e-05  Score=62.09  Aligned_cols=79  Identities=18%  Similarity=0.200  Sum_probs=57.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhH---HHHHHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADL---NAALKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~---~~~i~~~~~~~  149 (269)
                      ++++++|+||++++|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+.   .+.+.+.  ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence            4789999999999999999999999999999999988766554333   3321   2355543122   2333333  57


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        84 id~lv~nAg~   93 (252)
T 3h7a_A           84 LEVTIFNVGA   93 (252)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEECCCc
Confidence            9999999983

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.02  E-value=4.7e-05  Score=60.94  Aligned_cols=79  Identities=18%  Similarity=0.154  Sum_probs=59.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC-CCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP-EGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~-~~~d~vi  154 (269)
                      ++++++|+||++++|.++++.+...|++|++++++.++.+.+.++++...   ..|..+..+....+.+... +++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            47899999999999999999999999999999999998887765776532   2355554233444444422 2789999


Q ss_pred             eCC
Q 024337          155 ENV  157 (269)
Q Consensus       155 d~~  157 (269)
                      .+.
T Consensus       109 ~~a  111 (281)
T 3ppi_A          109 VAH  111 (281)
T ss_dssp             ECC
T ss_pred             Ecc
Confidence            883

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.02  E-value=1.7e-05  Score=62.85  Aligned_cols=81  Identities=21%  Similarity=0.276  Sum_probs=56.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---C-Cc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---G-FD-E--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g-~~-~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++   + .. .  ..|..+..+..+.+.+...  ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999988776554333   2 11 1  2355543123322322211  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        89 id~lvnnAg~   98 (262)
T 3pk0_A           89 IDVVCANAGV   98 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.02  E-value=2.5e-05  Score=61.86  Aligned_cols=81  Identities=16%  Similarity=0.170  Sum_probs=57.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++...   ...|..+..++.+.+.+...  +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999999988776654344321   12355543233333332211  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.01  E-value=3.8e-05  Score=60.20  Aligned_cols=81  Identities=22%  Similarity=0.343  Sum_probs=57.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.+.+   +...   ..|..+..+..+.+.+..  .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988766554333   4322   235555423333333322  2379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.01  E-value=1.1e-05  Score=63.80  Aligned_cols=81  Identities=19%  Similarity=0.162  Sum_probs=51.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      ++++++|+||++++|..+++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999999998887666554554421   2355543233333332211  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.00  E-value=2e-05  Score=63.05  Aligned_cols=81  Identities=17%  Similarity=0.300  Sum_probs=58.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+.++++...   ..|..+..++...+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999999999999999999888777664555432   2355554233333332211  369999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999983

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.00  E-value=7.2e-05  Score=58.11  Aligned_cols=80  Identities=18%  Similarity=0.260  Sum_probs=55.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      +++++|+||++++|..+++.+...|++|++++++.++.+.+.+++    +...   ..|..+..+..+.+.+..  -+++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            678999999999999999999999999999999988766544332    3322   234444312222222111  1379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        82 d~li~~Ag~   90 (235)
T 3l77_A           82 DVVVANAGL   90 (235)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999984

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.00  E-value=3.1e-05  Score=62.02  Aligned_cols=82  Identities=18%  Similarity=0.288  Sum_probs=56.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ..++++||+||++++|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+..+.+.+...  ++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988776554343   3321   2355554233333332211  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.00  E-value=3.2e-05  Score=61.63  Aligned_cols=81  Identities=15%  Similarity=0.166  Sum_probs=57.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~~d~vi  154 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++....  ..|..+..++...+.+...  +++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999999999888776654543222  2344443123332322211  3699999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +++|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99973

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.00  E-value=3.1e-05  Score=62.13  Aligned_cols=81  Identities=14%  Similarity=0.189  Sum_probs=57.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---Cce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG---FDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g---~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++++++|+||++++|.++++.+...|++|++++++.++.+.+.+++.   ...   ..|..+..+....+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999888776654542   221   2355543223333332211  379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=98.00  E-value=3.6e-05  Score=64.70  Aligned_cols=91  Identities=19%  Similarity=0.145  Sum_probs=70.9

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .-.|++++|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|.. +.      ++.+.++     ..|+++.+
T Consensus       244 ~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~-----~ADIVv~a  309 (464)
T 3n58_A          244 MMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAS-----TADIVVTT  309 (464)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGG-----GCSEEEEC
T ss_pred             cccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHh-----hCCEEEEC
Confidence            457999999998 99999999999999999999998877655555 55653 22      3333333     48999999


Q ss_pred             CCch-hH-hhhHhhhhcCCEEEEEecc
Q 024337          157 VGGK-TL-DAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       157 ~g~~-~~-~~~~~~l~~~G~~v~~g~~  181 (269)
                      .|.. .+ ...+..|++++.++.++..
T Consensus       310 tgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          310 TGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             CSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             CCCccccCHHHHhcCCCCeEEEEcCCC
Confidence            9863 33 5788999999999988763

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.00  E-value=3.3e-05  Score=60.83  Aligned_cols=81  Identities=14%  Similarity=0.179  Sum_probs=56.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C--Cc-eeEec--CChhhHHHHHHHHC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----G--FD-EAFNY--KEEADLNAALKRYF--P  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g--~~-~~~~~--~~~~~~~~~i~~~~--~  147 (269)
                      .+++++|+||++++|.++++.+...|++|+++++++++.+.+.+++    +  .. ...|.  .+..+..+.+.+..  -
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999988766554332    2  11 12344  33312222232221  1


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        91 g~id~lv~nAg~  102 (252)
T 3f1l_A           91 PRLDGVLHNAGL  102 (252)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999983

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.00  E-value=3.1e-05  Score=61.36  Aligned_cols=80  Identities=15%  Similarity=0.196  Sum_probs=57.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c-eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-EAFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..  . ...|..+..++.+.+.+..  -+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999999999999999998877766534432  1 1235554323333333221  1369999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      ++++|
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99998

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.00  E-value=2.7e-05  Score=61.98  Aligned_cols=80  Identities=11%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHcCCc---eeEecCChhhHHHHHH---HHCC--
Q 024337           79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNKFGFD---EAFNYKEEADLNAALK---RYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~~~g~~---~~~~~~~~~~~~~~i~---~~~~--  147 (269)
                      ++++++|+||  ++++|..+++.+...|++|+++++++++ .+.+.++++..   ...|..+..+..+.+.   +..+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999998  9999999999999999999999988765 35444355432   1245555422222222   2222  


Q ss_pred             CCccEEEeCCC
Q 024337          148 EGIDVYFENVG  158 (269)
Q Consensus       148 ~~~d~vid~~g  158 (269)
                      +++|++++++|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            16999999998

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.00  E-value=4e-05  Score=61.09  Aligned_cols=81  Identities=14%  Similarity=0.271  Sum_probs=57.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHH---HHHHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLN---AALKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~---~~i~~~~~~~  149 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+..   +.+.+..+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988765543232   4321   23554431222   2233333357


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.99  E-value=2e-05  Score=62.67  Aligned_cols=104  Identities=18%  Similarity=0.223  Sum_probs=66.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|.++++.+...|++|++++ ++++..+.+.+   ..+...   ..|..+..+..+.+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999874 44444443322   334322   2355554223333332211  37


Q ss_pred             ccEEEeCCCch--------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGGK--------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++++++|..                          ..+.+++.++++|++|.++...
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            99999999831                          0234555666789999987643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.99  E-value=6.8e-05  Score=60.54  Aligned_cols=105  Identities=12%  Similarity=0.085  Sum_probs=69.8

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~---~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||+|  ++|..+++.+...|++|++++++++..+.+.   ++.+...  ..|..+..+..+.+.+...  ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999987  9999999999999999999999875443332   2344322  2355554233333332211  37


Q ss_pred             ccEEEeCCCch------------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          150 IDVYFENVGGK------------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       150 ~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +|++++++|..                              ..+.+++.++++|++|.++....
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            99999999831                              02334556667899999877554

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.99  E-value=3.4e-05  Score=60.67  Aligned_cols=81  Identities=17%  Similarity=0.242  Sum_probs=56.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++++++|+||++++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+..+.+.+...  +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988776654333   3221   2344443122222222211  369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999974

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.99  E-value=2.5e-05  Score=62.43  Aligned_cols=81  Identities=21%  Similarity=0.272  Sum_probs=56.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..+..+.+.+...  +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999988765544333   322 1  2355554233333332211  379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.99  E-value=6.1e-05  Score=60.74  Aligned_cols=105  Identities=11%  Similarity=0.137  Sum_probs=68.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHH---HHcCCce---eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLK---NKFGFDE---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~---~~~g~~~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      +++++||+||++++|..+++.+...|++|++++++.  +..+.+.   ++.+...   ..|..+..+....+.+...  +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999998762  2333222   1344432   2344443122222222211  3


Q ss_pred             CccEEEeCCCc-h---h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          149 GIDVYFENVGG-K---T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++|++++++|. .   .                       .+.+++.++++|++|.++....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            79999999983 1   0                       2345556667899999987554

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.99  E-value=2.4e-05  Score=62.02  Aligned_cols=80  Identities=18%  Similarity=0.135  Sum_probs=57.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.++++...   ..|..+..++.+.+.+...  +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            46899999999999999999999999999999998877666554665432   2344443133333332211  369999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      |+++|
T Consensus        91 i~~Ag   95 (265)
T 2o23_A           91 VNCAG   95 (265)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.99  E-value=2.8e-05  Score=61.61  Aligned_cols=104  Identities=15%  Similarity=0.200  Sum_probs=66.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---DKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~---~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--  147 (269)
                      .+++++|+||++++|.++++.+...|++|++++++.   ++.+.+.+++   +...   ..|..+..+....+.+...  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999987653   3333332232   3321   2355554223333332211  


Q ss_pred             CCccEEEeCCCch---h-----------------------HhhhHhhhhcCCEEEEEeccc
Q 024337          148 EGIDVYFENVGGK---T-----------------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       148 ~~~d~vid~~g~~---~-----------------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +++|++++++|..   .                       .+.+++.|+++|+++.++...
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~  150 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSL  150 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechh
Confidence            3799999999831   0                       233445556779999887643

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.98  E-value=3.3e-05  Score=61.23  Aligned_cols=81  Identities=21%  Similarity=0.290  Sum_probs=57.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      +++++||+||+|++|..+++.+...|++|++++++.++.+.+.+++   +...   ..|..+..+....+.+..  -+++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999988776554333   3321   235554423333333221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999984

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.98  E-value=2.1e-05  Score=63.47  Aligned_cols=81  Identities=15%  Similarity=0.225  Sum_probs=57.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---c----eeEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---D----EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~----~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++..   .    ...|..+..+..+.+.+...  ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998876665444432   1    12355554222232322211  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.98  E-value=4.3e-05  Score=60.44  Aligned_cols=80  Identities=14%  Similarity=0.279  Sum_probs=56.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHH---HHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAAL---KRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i---~~~~~~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+..+.+   .+..+++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988765543233   3321   23555431222222   2333257


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++++++|
T Consensus        88 id~lv~~Ag   96 (260)
T 2ae2_A           88 LNILVNNAG   96 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.97  E-value=4.2e-05  Score=63.19  Aligned_cols=103  Identities=22%  Similarity=0.313  Sum_probs=68.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHcCCce---eEecCChhhHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-----------VDLLKNKFGFDE---AFNYKEEADLNAALKR  144 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-----------~~~~~~~~g~~~---~~~~~~~~~~~~~i~~  144 (269)
                      .+++++|+||++++|.++++.+...|++|++++++.++           .+.++ ..+...   ..|..+..++.+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999988653           22333 444432   2455554233333332


Q ss_pred             HCC--CCccEEEeCCCch--------------------------hHhhhHhhhhc--CCEEEEEeccc
Q 024337          145 YFP--EGIDVYFENVGGK--------------------------TLDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       145 ~~~--~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                      ...  +++|++|+++|..                          ..+.++..|+.  .|++|.++...
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~  190 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL  190 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHH
Confidence            221  3799999999831                          02344555554  48999987654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.97  E-value=4.2e-05  Score=60.60  Aligned_cols=80  Identities=15%  Similarity=0.271  Sum_probs=56.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999988766544333   3321   2355544233322322211  369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++++++|
T Consensus        86 d~lv~nAg   93 (262)
T 1zem_A           86 DFLFNNAG   93 (262)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.97  E-value=4.3e-05  Score=60.63  Aligned_cols=82  Identities=16%  Similarity=0.202  Sum_probs=57.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      -.+++++|+||++++|..+++.+...|++|++++++.++.+.+.+++   +...   ..|..+..+..+.+.+..  -++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988776654333   3321   235555423333333221  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999999864

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.97  E-value=2.7e-05  Score=62.00  Aligned_cols=81  Identities=16%  Similarity=0.319  Sum_probs=56.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .++++||+||++++|..+++.+...|++|+++++++++.+.+.+.   .+..   ...|..+..+....+.+...  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999998876654322   2332   23455554233333332211  369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus       107 D~lvnnAg~  115 (270)
T 3ftp_A          107 NVLVNNAGI  115 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.96  E-value=2.1e-05  Score=62.17  Aligned_cols=105  Identities=18%  Similarity=0.264  Sum_probs=70.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||++++|..+++.+...|++|++++++.++.+.+.+++   +...   ..|..+..+..+.+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988766554333   3321   2355543122222322211  379


Q ss_pred             cEEEeCCCch----------h---------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          151 DVYFENVGGK----------T---------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      |++++++|..          .               .+.+++.|+.  +|++|.++....
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  150 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG  150 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH
Confidence            9999999841          0               2334444543  579999877554

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.96  E-value=2.5e-05  Score=62.56  Aligned_cols=80  Identities=23%  Similarity=0.292  Sum_probs=57.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---Cce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG---FDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g---~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .++++||+||++++|.++++.+...|++|+++++++++.+.+.+++.   ...   ..|..+..+....+.+...  +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999988776654542   221   2354443122222222211  369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++++++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999998

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.96  E-value=4.9e-05  Score=60.73  Aligned_cols=81  Identities=15%  Similarity=0.155  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHH---HcCCce---eEecCChhhHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-------------SKDKVDLLKN---KFGFDE---AFNYKEEADLN  139 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-------------s~~~~~~~~~---~~g~~~---~~~~~~~~~~~  139 (269)
                      .+++++|+||++++|.++++.+...|++|+++++             +.++.+.+.+   ..+...   ..|..+..+..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999999999999999999999999999987             4555444332   223322   23555432333


Q ss_pred             HHHHHHCC--CCccEEEeCCCc
Q 024337          140 AALKRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       140 ~~i~~~~~--~~~d~vid~~g~  159 (269)
                      +.+.+...  +++|++++++|.
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33332211  369999999984

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.96  E-value=1.1e-05  Score=63.46  Aligned_cols=99  Identities=13%  Similarity=0.167  Sum_probs=66.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCC--CCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP--EGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~--~~~d~vid~  156 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.      ....++..+..+....+.+...  +++|+++++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            46899999999999999999999999999999988654321      1122334443133333444322  379999999


Q ss_pred             CCc----h-----------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          157 VGG----K-----------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       157 ~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +|.    .                       ..+.+++.++++|++|.++....
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            983    0                       02344555667789999877554

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.96  E-value=2.8e-05  Score=62.33  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=56.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---ce---eEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF---DE---AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~---~~---~~~~~~~~~~~~~i~~~~~--  147 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++   +.   ..   ..|..+..+..+.+.+...  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999988765544333   32   11   2355543233333332221  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999984

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.96  E-value=2.9e-05  Score=61.61  Aligned_cols=105  Identities=12%  Similarity=0.134  Sum_probs=70.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-e---eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-E---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      .+++++|+||++++|.++++.+...|++|+++++++++.+.+.+++    +.. .   ..|..+..+....+.+...  +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999988766544332    222 1   2355554122222322211  3


Q ss_pred             CccEEEeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          149 GIDVYFENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++|++++++|..   .                       .+.+++.++.  +|++|.++....
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  149 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA  149 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGG
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCccc
Confidence            799999999831   0                       2334455544  588998876554

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.96  E-value=4e-05  Score=61.29  Aligned_cols=80  Identities=18%  Similarity=0.270  Sum_probs=56.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|.++++.+...|++|++++++.++.+.+.+++    +...   ..|..+..+....+.+...  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999987665443232    4321   2355554233333332211  37


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++++++|
T Consensus       106 id~lv~nAg  114 (277)
T 4fc7_A          106 IDILINCAA  114 (277)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999998

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.95  E-value=4.7e-05  Score=59.10  Aligned_cols=80  Identities=19%  Similarity=0.204  Sum_probs=56.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~~d~vi  154 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++-..  ..|..+..++.+.+.+...  +++|+++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35789999999999999999999999999999999888776654553222  2344443133332332211  3699999


Q ss_pred             eCCC
Q 024337          155 ENVG  158 (269)
Q Consensus       155 d~~g  158 (269)
                      +++|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9998

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.95  E-value=4.3e-05  Score=59.93  Aligned_cols=81  Identities=19%  Similarity=0.309  Sum_probs=55.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++ ++++.+.+.+++   +...   ..|..+..++.+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999999999999999999999999998 776655443232   4321   2355544233333332211  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 2uvd_A           83 VDILVNNAGV   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.95  E-value=1.7e-05  Score=63.02  Aligned_cols=81  Identities=23%  Similarity=0.325  Sum_probs=57.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .++++||+||++++|.++++.+...|++|++++++.++.+.+.++    .+...   ..|..+..+..+.+.+...  ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999998876654423    34322   2355443133333332211  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        99 id~lv~nAg~  108 (266)
T 4egf_A           99 LDVLVNNAGI  108 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.95  E-value=9e-05  Score=59.73  Aligned_cols=106  Identities=11%  Similarity=0.067  Sum_probs=69.7

Q ss_pred             CCCCEEEEecCcch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCce--eEecCChhhHHHHHHHHC--CC
Q 024337           78 KHGECVFISAASGA--VGQLVGQFAKLLGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g~--vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~---~~~g~~~--~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      -.+++++|+||+|+  +|.++++.+...|++|++++++++..+.++   ++.+...  ..|..+..+....+.+..  -+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35789999999855  999999999999999999998865433332   1334322  235555422333333221  13


Q ss_pred             CccEEEeCCCc-h-----------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          149 GIDVYFENVGG-K-----------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++|++++++|. .                             ..+.+++.++++|++|.++....
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            79999999983 1                             02345556667899999887554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.95  E-value=1.8e-05  Score=62.77  Aligned_cols=80  Identities=16%  Similarity=0.082  Sum_probs=55.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD-LLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      .++++||+||++++|.++++.+...|++|+++++++++.. .++ +.+... ..|..+..+..+.+.+..  -+++|+++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4678999999999999999999999999999999876643 344 556532 345555422333333221  13799999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +++|.
T Consensus       105 ~nAg~  109 (260)
T 3gem_A          105 HNASE  109 (260)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99983

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.95  E-value=2.7e-05  Score=62.36  Aligned_cols=80  Identities=18%  Similarity=0.293  Sum_probs=56.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---c-e--eEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~---~-~--~~~~~~~~~~~~~i~~~~~--  147 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+..++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999988776554333   22   1 1  2355554123333332211  


Q ss_pred             CCccEEEeCCC
Q 024337          148 EGIDVYFENVG  158 (269)
Q Consensus       148 ~~~d~vid~~g  158 (269)
                      +++|++|+++|
T Consensus        85 g~iD~lv~nAg   95 (280)
T 1xkq_A           85 GKIDVLVNNAG   95 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999998

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.94  E-value=3.1e-05  Score=61.86  Aligned_cols=80  Identities=18%  Similarity=0.232  Sum_probs=56.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..  . .  ..|..+..++.+.+.+..  -+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999999998876655434421  1 1  234444312332233221  13799


Q ss_pred             EEEeCCC
Q 024337          152 VYFENVG  158 (269)
Q Consensus       152 ~vid~~g  158 (269)
                      ++|+++|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999998

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.94  E-value=0.00014  Score=56.70  Aligned_cols=78  Identities=14%  Similarity=0.172  Sum_probs=55.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-CCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-GFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++. +... ..|..+. +..+.+.+ .-+++|++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~-~~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALG-GIGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHT-TCCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCH-HHHHHHHH-HcCCCCEEEEC
Confidence            4679999999999999999999999999999999988776655333 2221 2344443 22222222 11368999999


Q ss_pred             CC
Q 024337          157 VG  158 (269)
Q Consensus       157 ~g  158 (269)
                      +|
T Consensus        84 Ag   85 (244)
T 1cyd_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.94  E-value=4e-05  Score=65.39  Aligned_cols=89  Identities=16%  Similarity=0.191  Sum_probs=69.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|++++|+|+ |++|..+++.++..|++|+++++++.+...+. ..+.+ +.+..   +   .     ...+|+++++.
T Consensus       263 L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~le---e---~-----~~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLE---D---V-----VSEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGG---G---T-----TTTCSEEEECS
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHH---H---H-----HHhcCEEEeCC
Confidence            47899999998 79999999999999999999999988877776 56652 21111   1   1     12589999999


Q ss_pred             Cc-hhH-hhhHhhhhcCCEEEEEec
Q 024337          158 GG-KTL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~-~~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      |. ..+ ...++.+++++.++.+|.
T Consensus       329 G~~~vl~~e~l~~mk~gaiVvNaG~  353 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNNAIVCNIGH  353 (488)
T ss_dssp             SCSCSBCHHHHTTSCTTEEEEESSS
T ss_pred             CChhhhhHHHHHhcCCCeEEEEcCC
Confidence            96 444 347888999999988875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.93  E-value=3.2e-05  Score=61.61  Aligned_cols=81  Identities=20%  Similarity=0.352  Sum_probs=57.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .++++||+||++++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+..+.+.+..  .+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999999999999999999988766554333   4322   235554423333333221  2379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus       105 D~lv~nAg~  113 (271)
T 4ibo_A          105 DILVNNAGI  113 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.93  E-value=3.3e-05  Score=60.05  Aligned_cols=98  Identities=15%  Similarity=0.151  Sum_probs=66.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|+|+||+|++|..+++.+...|.+|++++|++++.+.+. ..+....+..+-  .  +.+.+.. +++|++|+++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl--~--~~~~~~~-~~~D~vi~~ag   93 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANL--E--EDFSHAF-ASIDAVVFAAG   93 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCT--T--SCCGGGG-TTCSEEEECCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEccc--H--HHHHHHH-cCCCEEEECCC
Confidence            4789999999999999999999999999999999999888776 556512222211  1  2233322 26999999998


Q ss_pred             chh--------------HhhhHhhhhc--CCEEEEEeccc
Q 024337          159 GKT--------------LDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       159 ~~~--------------~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                      ...              ....++.++.  .+++|.++...
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            421              1223333332  37899887744

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.93  E-value=4.7e-05  Score=59.79  Aligned_cols=80  Identities=13%  Similarity=0.204  Sum_probs=55.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHH-HHHHHcCCce---eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVD-LLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~-~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++ ++.+ .++ +.+...   ..|..+..++.+.+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999887 6554 333 555422   2355544123333332211  3699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        85 ~lv~nAg~   92 (249)
T 2ew8_A           85 ILVNNAGI   92 (249)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999983

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.93  E-value=5.6e-05  Score=60.21  Aligned_cols=81  Identities=20%  Similarity=0.219  Sum_probs=56.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++.+.+.+..  -+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4689999999999999999999999999999999988766543232   4321   235444312333333221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999983

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.93  E-value=3.4e-05  Score=61.66  Aligned_cols=81  Identities=14%  Similarity=0.277  Sum_probs=56.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---c-e--eEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~---~-~--~~~~~~~~~~~~~i~~~~~--  147 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   ..   . .  ..|..+..++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999988776654344   21   1 1  2355543123333332211  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            369999999983

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.92  E-value=6e-05  Score=59.46  Aligned_cols=80  Identities=10%  Similarity=0.179  Sum_probs=55.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +.. .  ..|..+..++.+.+.+...  +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999987665433232   432 1  2344443233333332211  369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|+++|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.92  E-value=3.4e-05  Score=60.90  Aligned_cols=80  Identities=14%  Similarity=0.145  Sum_probs=55.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++ +.+.++++.. ...|..+..++.+.+.+..  -+++|++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999998777 4443355321 1234444313333333221  136999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        84 ~Ag~   87 (256)
T 2d1y_A           84 NAAI   87 (256)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9983

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.92  E-value=4.2e-05  Score=60.52  Aligned_cols=81  Identities=11%  Similarity=0.221  Sum_probs=55.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHc----CCce---eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNKF----GFDE---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~~~----g~~~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++ .+.+.+++    +...   ..|..+..++...+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999988766 54443233    4322   2355543223333332211  3


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++|+++|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.91  E-value=3.2e-05  Score=62.49  Aligned_cols=80  Identities=19%  Similarity=0.344  Sum_probs=55.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC---c-e--eEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF---D-E--AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~---~-~--~~~~~~~~~~~~~i~~~~~--  147 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +.   . .  ..|..+..++...+.+...  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999988765543232   32   1 1  2355543123333332211  


Q ss_pred             CCccEEEeCCC
Q 024337          148 EGIDVYFENVG  158 (269)
Q Consensus       148 ~~~d~vid~~g  158 (269)
                      +++|++|+++|
T Consensus       105 g~iD~lvnnAG  115 (297)
T 1xhl_A          105 GKIDILVNNAG  115 (297)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999998

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.91  E-value=1.3e-05  Score=63.84  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+. .-... ...|..+..++.+.+.+...  +++|++++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4689999999999999999999999999999999987665432 11111 13355543233333332211  37999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        94 nAg~   97 (266)
T 3p19_A           94 NAGM   97 (266)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9984

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.91  E-value=5.7e-05  Score=59.69  Aligned_cols=80  Identities=16%  Similarity=0.263  Sum_probs=55.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+....+.+..  -+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999987765443232   3321   234444312222232221  1369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++++++|
T Consensus        93 D~lv~~Ag  100 (260)
T 2zat_A           93 DILVSNAA  100 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.90  E-value=8.5e-05  Score=58.70  Aligned_cols=80  Identities=15%  Similarity=0.200  Sum_probs=56.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC---CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF---PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~---~~~  149 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++...+.+..   .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999999988765544333   3321   235554423333333321   347


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++++++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999994

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.90  E-value=5.3e-05  Score=59.41  Aligned_cols=79  Identities=20%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +++++|+||+|++|..++..+...|++|+++++++++.+.+.+++    +.. .  ..|..+..++.+.+.+...  +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999988776654344    221 1  2344443233333332211  369


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |++|+++|
T Consensus        82 d~li~~Ag   89 (250)
T 2cfc_A           82 DVLVNNAG   89 (250)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999997

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.90  E-value=5.1e-05  Score=60.53  Aligned_cols=80  Identities=14%  Similarity=0.086  Sum_probs=54.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc----CCce---eEecCCh----hhHHHHHHHHC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKF----GFDE---AFNYKEE----ADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~----g~~~---~~~~~~~----~~~~~~i~~~~  146 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++ ++++.+.+.+++    +...   ..|..+.    .++...+.+..
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999 877665544333    4321   2243332    13333333221


Q ss_pred             C--CCccEEEeCCC
Q 024337          147 P--EGIDVYFENVG  158 (269)
Q Consensus       147 ~--~~~d~vid~~g  158 (269)
                      .  +++|++|+++|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  36999999998

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.90  E-value=5.9e-05  Score=59.03  Aligned_cols=77  Identities=18%  Similarity=0.060  Sum_probs=55.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEE-e--CCHHHHHHHHHHc-CCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-A--GSKDKVDLLKNKF-GFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~--~s~~~~~~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      +++++|+||++++|..+++.+...|++|+++ .  +++++.+.+.+++ +. .+.|..+-..+.+.+.+.. +++|++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            4689999999999999999999999999999 5  8988877665455 32 2333333213444444332 37999999


Q ss_pred             CCC
Q 024337          156 NVG  158 (269)
Q Consensus       156 ~~g  158 (269)
                      ++|
T Consensus        79 ~Ag   81 (244)
T 1zmo_A           79 NDY   81 (244)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            998

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.88  E-value=7.3e-05  Score=58.47  Aligned_cols=81  Identities=19%  Similarity=0.430  Sum_probs=56.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++    .+...   ..|..+..++.+.+.+..  -++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            468899999999999999999999999999999998876654422    34321   234444313333333221  136


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus        86 ~d~vi~~Ag~   95 (248)
T 2pnf_A           86 IDILVNNAGI   95 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.88  E-value=4.9e-05  Score=60.36  Aligned_cols=79  Identities=11%  Similarity=0.200  Sum_probs=55.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc---eeEecCChhhHHHHHHHHCCCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD---EAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++++.+.+.+++     +..   ...|..+. +..+.+.+.. +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE-QGCQDVIEKY-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH-HHHHHHHHHC-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH-HHHHHHHHhc-CCC
Confidence            4789999999999999999999999999999999988765543232     121   12344444 3333333322 379


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        87 d~lv~nAg~   95 (267)
T 3t4x_A           87 DILINNLGI   95 (267)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.88  E-value=0.00011  Score=56.57  Aligned_cols=92  Identities=11%  Similarity=-0.025  Sum_probs=63.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|||+||+|.+|..+++.+...|.+|++++|++++.+.+. ..+... ..|..+. +. +.+     +++|+||+++|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE-ADL-----DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH-HHH-----TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH-hhc-----ccCCEEEECCccC
Confidence            6999999999999999999999999999999988776554 334432 2344433 22 222     2699999999852


Q ss_pred             -----------hHhhhHhhhhc-CCEEEEEecc
Q 024337          161 -----------TLDAVLPNMKI-RGRIAACGMI  181 (269)
Q Consensus       161 -----------~~~~~~~~l~~-~G~~v~~g~~  181 (269)
                                 .....++.++. +++++.++..
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                       12334444443 5788888654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.88  E-value=4.4e-05  Score=60.19  Aligned_cols=78  Identities=17%  Similarity=0.032  Sum_probs=52.7

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN--KFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+.+.+  ..+... .+|..+-..+.+.+.+.. +++|++++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lv~nA   80 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   80 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHh-CCCCEEEECC
Confidence            479999999999999999999999999999988776655431  224322 223222112333333322 3699999998


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      |.
T Consensus        81 g~   82 (254)
T 1zmt_A           81 IF   82 (254)
T ss_dssp             CC
T ss_pred             Cc
Confidence            73

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.88  E-value=7.6e-05  Score=59.49  Aligned_cols=80  Identities=19%  Similarity=0.315  Sum_probs=56.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+.++++.  . .  ..|..+..++.+.+.+..  -+++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999988776555435543  1 1  235444323333333221  13699


Q ss_pred             EEEeCCC
Q 024337          152 VYFENVG  158 (269)
Q Consensus       152 ~vid~~g  158 (269)
                      ++|+++|
T Consensus        95 ~li~~Ag  101 (278)
T 2bgk_A           95 IMFGNVG  101 (278)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.87  E-value=6.8e-05  Score=59.42  Aligned_cols=81  Identities=14%  Similarity=0.296  Sum_probs=55.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHH---HHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALK---RYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~---~~~~~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++.+.+.   +..+++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999987765543232   3321   234444312222222   222247


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999883

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.87  E-value=0.00012  Score=57.10  Aligned_cols=80  Identities=25%  Similarity=0.328  Sum_probs=53.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      +++++|+||+|++|..+++.+...|++|+++ .+++++.+.+.++   .+...   ..|..+..++.+.+.+..  -+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999985 7887766544322   24321   234444323333333221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.87  E-value=0.00011  Score=57.97  Aligned_cols=79  Identities=15%  Similarity=0.290  Sum_probs=52.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++  .+.++ +.+...   ..|..+..++...+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999999987651  12222 234322   2344443133333332211  3699


Q ss_pred             EEEeCCC
Q 024337          152 VYFENVG  158 (269)
Q Consensus       152 ~vid~~g  158 (269)
                      ++++++|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999998

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.87  E-value=7.7e-05  Score=60.27  Aligned_cols=80  Identities=13%  Similarity=0.240  Sum_probs=56.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++    +...   ..|..+..++...+.+..  -++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999988765543233    4321   235444323333333221  237


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|+++|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999998

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.87  E-value=6e-05  Score=60.07  Aligned_cols=79  Identities=15%  Similarity=0.249  Sum_probs=57.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c-e--eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++..  . .  ..|..+..++...+.+...  +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7899999999999999999999999999999998887766545432  1 1  2355554233333333322  368999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999973

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.86  E-value=0.00012  Score=58.09  Aligned_cols=81  Identities=12%  Similarity=0.204  Sum_probs=55.4

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~---~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||+  |++|..+++.+...|++|+++++++   +..+.+.+..+...  ..|..+..++.+.+.+...  ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46889999998  9999999999999999999999876   33344432334322  2355554233333443322  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.86  E-value=3.5e-05  Score=60.72  Aligned_cols=95  Identities=18%  Similarity=0.228  Sum_probs=61.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+.       ....|..+..++.+.+.+ ..+++|++|+++|..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~-~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAK-CSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTT-CTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHH-hCCCCCEEEECCCCC
Confidence            479999999999999999999999999999987653210       111122221012222222 224789999999842


Q ss_pred             h-------------------HhhhHhhhhcC--CEEEEEecccc
Q 024337          161 T-------------------LDAVLPNMKIR--GRIAACGMISQ  183 (269)
Q Consensus       161 ~-------------------~~~~~~~l~~~--G~~v~~g~~~~  183 (269)
                      .                   .+.+++.|++.  |++|.++....
T Consensus        74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence            1                   34455555543  89999877554

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.85  E-value=7.8e-05  Score=59.92  Aligned_cols=105  Identities=20%  Similarity=0.268  Sum_probs=71.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHc-----CCce---eEecCChhhHHHHHHHHCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~---~V~~~~~s~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~i~~~~~  147 (269)
                      .+++++|+||++++|..+++.+...|+   +|+.++++.++.+.+.+++     +...   ..|..+..+....+.+...
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999988877777   9999999988876655343     3221   2455554244444444332


Q ss_pred             --CCccEEEeCCCc-h---h-----------------------HhhhHhhhh--cCCEEEEEecccc
Q 024337          148 --EGIDVYFENVGG-K---T-----------------------LDAVLPNMK--IRGRIAACGMISQ  183 (269)
Q Consensus       148 --~~~d~vid~~g~-~---~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  183 (269)
                        +++|++++++|. .   .                       .+.+++.|+  ..|++|.++....
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~  178 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAG  178 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhh
Confidence              379999999983 1   0                       233444443  3689999887554

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.85  E-value=0.00015  Score=60.96  Aligned_cols=89  Identities=13%  Similarity=0.196  Sum_probs=69.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|....       ++.+.++     ..|+++.+.
T Consensus       209 L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~~-------sL~eal~-----~ADVVilt~  274 (436)
T 3h9u_A          209 IAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQVL-------LVEDVVE-----EAHIFVTTT  274 (436)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-------CHHHHTT-----TCSEEEECS
T ss_pred             ccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCeec-------CHHHHHh-----hCCEEEECC
Confidence            36899999998 99999999999999999999999887776666 6665321       3333333     489999988


Q ss_pred             Cc-hhHh-hhHhhhhcCCEEEEEec
Q 024337          158 GG-KTLD-AVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~-~~~~-~~~~~l~~~G~~v~~g~  180 (269)
                      +. ..+. ..++.|+++..++.++.
T Consensus       275 gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          275 GNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             SCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             CCcCccCHHHHhhcCCCcEEEEeCC
Confidence            86 3343 67888999998888865

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.84  E-value=0.00012  Score=57.78  Aligned_cols=80  Identities=21%  Similarity=0.278  Sum_probs=55.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHc-----CCce---eEecCChhhHHHHHHHHC-
Q 024337           79 HGECVFISAASGAVGQLVGQFAKL---LGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEADLNAALKRYF-  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~---~G~~V~~~~~s~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~i~~~~-  146 (269)
                      ++++++|+||++++|..+++.+..   .|++|+++++++++.+.+.+++     +...   ..|..+..+..+.+.+.. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            367899999999999999998887   8999999999988766554343     3221   235555423333333332 


Q ss_pred             ---CCCcc--EEEeCCC
Q 024337          147 ---PEGID--VYFENVG  158 (269)
Q Consensus       147 ---~~~~d--~vid~~g  158 (269)
                         .+++|  ++++++|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence               23678  9999987

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.84  E-value=6.2e-05  Score=59.70  Aligned_cols=81  Identities=22%  Similarity=0.320  Sum_probs=56.5

Q ss_pred             CCCEEEEecCcc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---C-Cc---eeEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASG-AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---G-FD---EAFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g-~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g-~~---~~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      ++++++|+||+| ++|..+++.+...|++|++++++.++.+.+.+++   + ..   ...|..+..++.+.+.+...  +
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            578999999985 8999999999999999999999988776654344   2 11   12355554233333332211  3


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++|+++|.
T Consensus       101 ~id~li~~Ag~  111 (266)
T 3o38_A          101 RLDVLVNNAGL  111 (266)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            69999999983

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.84  E-value=0.0003  Score=49.97  Aligned_cols=94  Identities=18%  Similarity=0.117  Sum_probs=67.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE-ecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      ..++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.++ +.|...+. |..+.    +.+++..-.++|.++-++
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~----~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAANE----EIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSH----HHHHHTTGGGCSEEEECC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCH----HHHHhcCcccCCEEEEEC
Confidence            3568999998 99999999999999999999999999999998 77775432 33332    223332222799999999


Q ss_pred             Cchh----HhhhHhhhhcCCEEEEE
Q 024337          158 GGKT----LDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       158 g~~~----~~~~~~~l~~~G~~v~~  178 (269)
                      +...    +....+.+.+..+++..
T Consensus        80 ~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEEE
Confidence            9632    22344455566666654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.84  E-value=7.6e-05  Score=58.66  Aligned_cols=81  Identities=22%  Similarity=0.346  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++   +...   ..|..+..++.+.+.+..  -+++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999999987765443232   3321   234444312333232221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.84  E-value=7.1e-05  Score=59.11  Aligned_cols=80  Identities=11%  Similarity=0.196  Sum_probs=54.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +++++|+||+|++|..+++.+...|++|+++++++++  .+.+.+++   +...   ..|..+..++...+.+...  ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999988776  44433233   3221   2355543123332332211  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.83  E-value=0.00012  Score=57.31  Aligned_cols=81  Identities=14%  Similarity=0.176  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC--cee--Eec--CChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF--DEA--FNY--KEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~--~~~--~~~--~~~~~~~~~i~~~~~--  147 (269)
                      ++++++|+||++++|..+++.+...|++|+++++++++.+.+.+++   +.  ..+  +|.  .+..++.+.+.+...  
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999988776654332   21  112  233  332122222222211  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        93 g~id~lv~nAg~  104 (247)
T 3i1j_A           93 GRLDGLLHNASI  104 (247)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999999983

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.82  E-value=0.00045  Score=55.98  Aligned_cols=96  Identities=11%  Similarity=0.074  Sum_probs=63.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHc----CCc-eeEecCChhhHHHHHHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS---KDKVDLLKNKF----GFD-EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s---~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.+++    +.. ..++..+..++.+.+.     .
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----~  226 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----E  226 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----T
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----C
Confidence            5889999998 9999999999999999 99999999   77766544343    221 2445544213333333     4


Q ss_pred             ccEEEeCCCchhH------hh-hHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGGKTL------DA-VLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~~~~------~~-~~~~l~~~G~~v~~g~  180 (269)
                      +|+||+|++....      .. ....++++..++.+-.
T Consensus       227 aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY  264 (315)
T 3tnl_A          227 SVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY  264 (315)
T ss_dssp             CSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCC
T ss_pred             CCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEecc
Confidence            8999999973211      11 3445666655555533

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.82  E-value=0.0001  Score=59.59  Aligned_cols=80  Identities=16%  Similarity=0.271  Sum_probs=55.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CCc-e--eEecCChhhHHHHHHHHCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--------GFD-E--AFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--------g~~-~--~~~~~~~~~~~~~i~~~~~  147 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++        +.. .  ..|..+..++...+.+...
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999988765543232        222 1  2344443133333332211


Q ss_pred             --CCccEEEeCCC
Q 024337          148 --EGIDVYFENVG  158 (269)
Q Consensus       148 --~~~d~vid~~g  158 (269)
                        +++|++|+++|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              36999999998

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.82  E-value=9e-05  Score=58.04  Aligned_cols=78  Identities=19%  Similarity=0.269  Sum_probs=56.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+. ++.-..  ..|..+. +..+.+.+.. +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~-~~~~~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCH-HHHHHHHHHh-CCCCEEEEC
Confidence            4689999999999999999999999999999999987766544 332111  2355544 3333333322 369999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        82 Ag~   84 (246)
T 2ag5_A           82 AGF   84 (246)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            983

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.82  E-value=1.2e-05  Score=62.84  Aligned_cols=102  Identities=12%  Similarity=0.115  Sum_probs=64.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHH---HHHHHCC-CCccEE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNA---ALKRYFP-EGIDVY  153 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~---~i~~~~~-~~~d~v  153 (269)
                      .++++++|+||+|++|..+++.+...|++|+++++++++.+.   .. .....|..+..++.+   .+.+..+ +++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---AS-VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---EE-EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---Cc-EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            357899999999999999999999999999999988654220   10 001123333212222   2222222 479999


Q ss_pred             EeCCCch---------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337          154 FENVGGK---------------------------TLDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++++|..                           ..+.+++.++++|+++.++....
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~  137 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  137 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH
Confidence            9999830                           01234445555789999876544

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.82  E-value=8.4e-05  Score=58.75  Aligned_cols=81  Identities=12%  Similarity=0.077  Sum_probs=55.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----------C-ce--eEecCChhhHHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----------F-DE--AFNYKEEADLNAALKRY  145 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g----------~-~~--~~~~~~~~~~~~~i~~~  145 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.          . -.  ..|..+..++.+.+++.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            46799999999999999999999999999999999887766543331          1 11  23444431233333322


Q ss_pred             CC--CCc-cEEEeCCCc
Q 024337          146 FP--EGI-DVYFENVGG  159 (269)
Q Consensus       146 ~~--~~~-d~vid~~g~  159 (269)
                      ..  +++ |++|+++|.
T Consensus        86 ~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHSSCCSEEEECCCC
T ss_pred             HHHhCCCCeEEEECCCc
Confidence            11  356 999999983

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.81  E-value=0.00028  Score=52.53  Aligned_cols=93  Identities=14%  Similarity=0.107  Sum_probs=65.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeE-ecCChhhHHHHHHHH-CCCCccEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEADLNAALKRY-FPEGIDVYFEN  156 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~-~~~~~d~vid~  156 (269)
                      +++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.++ +.|...+. |..+.    +.+.+. .-.++|+++.|
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~----~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP----DFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH----HHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH----HHHHhccCCCCCCEEEEe
Confidence            568999997 99999999999998 999999999999998888 77875433 33332    233333 12379999999


Q ss_pred             CCc-hhHhhh---HhhhhcCCEEEEE
Q 024337          157 VGG-KTLDAV---LPNMKIRGRIAAC  178 (269)
Q Consensus       157 ~g~-~~~~~~---~~~l~~~G~~v~~  178 (269)
                      ++. ......   .+.+.+..+++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            996 333333   3334445566654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.81  E-value=2.3e-05  Score=61.03  Aligned_cols=97  Identities=19%  Similarity=0.128  Sum_probs=64.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .++|||+||+|++|..+++.+...| ++|++++|++++.+.+. ..+... ..|..+..++.+.++     ++|++|.++
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vv~~a   96 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQ-----GQDIVYANL   96 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHT-----TCSEEEEEC
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhc-----CCCEEEEcC
Confidence            4689999999999999999999999 79999999887654322 112211 234444312222222     589999999


Q ss_pred             Cch----hHhhhHhhhhcC--CEEEEEeccc
Q 024337          158 GGK----TLDAVLPNMKIR--GRIAACGMIS  182 (269)
Q Consensus       158 g~~----~~~~~~~~l~~~--G~~v~~g~~~  182 (269)
                      |..    ..+..++.++..  +++|.++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            863    234455555543  6899887644

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.81  E-value=0.00033  Score=55.86  Aligned_cols=102  Identities=17%  Similarity=0.134  Sum_probs=71.3

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc----C--CceeEecCChhhHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF----G--FDEAFNYKEEADLNAALKR  144 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~----g--~~~~~~~~~~~~~~~~i~~  144 (269)
                      ....+.++++||..|+  |.|..+..+++..  +.+|++++.+++..+.+++.+    |  ...+ ..... +..+.  .
T Consensus        93 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~-d~~~~--~  166 (280)
T 1i9g_A           93 HEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVS-DLADS--E  166 (280)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECS-CGGGC--C
T ss_pred             HHcCCCCCCEEEEEcc--cccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEEC-chHhc--C
Confidence            4567889999999997  4788999999875  569999999999888877443    4  2211 11111 21111  0


Q ss_pred             HCCCCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          145 YFPEGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       145 ~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..++.||+|+.....  ..+..+.+.|+++|+++....
T Consensus       167 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          167 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            112379999876664  678889999999999988754

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.81  E-value=2e-05  Score=61.86  Aligned_cols=76  Identities=14%  Similarity=0.157  Sum_probs=52.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC--CCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF--PEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~--~~~~d~vid~  156 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.   +  ...|..+..++.+.+.+..  -+++|+++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999999998765433221   1  2345555412333333221  1368999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        89 Ag~   91 (247)
T 1uzm_A           89 AGL   91 (247)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            983

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.80  E-value=8.1e-05  Score=59.71  Aligned_cols=81  Identities=11%  Similarity=0.318  Sum_probs=55.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+++++|+||+|++|..+++.+...|++|+++.+++++.+.+.+.+   +...   ..|..+..++.+.+.+..  -+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3679999999999999999999989999999998877765543233   4321   235554423333333221  1369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.80  E-value=9.5e-05  Score=58.35  Aligned_cols=80  Identities=19%  Similarity=0.228  Sum_probs=54.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++ ++++.+.+.+++   +...   ..|..+..++.+.+.+...  ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999998 766655433232   3321   2344443133333332211  36


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|+++|
T Consensus        86 id~li~~Ag   94 (261)
T 1gee_A           86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.80  E-value=0.0001  Score=58.95  Aligned_cols=81  Identities=11%  Similarity=0.183  Sum_probs=54.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc----CCce---eEecCChhhHHHHHHHHC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKF----GFDE---AFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~----g~~~---~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      .++++||+||++++|..+++.+...|++|+++++ +.++.+.+.+++    +...   ..|..+..+....+.+..  -+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4689999999999999999999999999999998 555554443233    2221   235554323333333221  13


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++++++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.79  E-value=6.8e-05  Score=58.49  Aligned_cols=76  Identities=13%  Similarity=0.223  Sum_probs=53.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCC--CCccEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFP--EGIDVYFEN  156 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid~  156 (269)
                      +++++|+||+|++|..+++.+...|++|+++++++++  ..+ +++... ..|..+. +..+.+.+...  +++|+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTS-CHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchH-HHHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999999999999999998776  333 555321 2343332 33333332211  369999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        78 Ag~   80 (239)
T 2ekp_A           78 AAV   80 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            983

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.79  E-value=6.6e-05  Score=59.10  Aligned_cols=81  Identities=22%  Similarity=0.326  Sum_probs=54.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++ +++.+.+.+++   +.. .  ..|..+..++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999988 66554433232   332 1  2344443233333332211  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.79  E-value=9.6e-05  Score=59.29  Aligned_cols=81  Identities=14%  Similarity=0.166  Sum_probs=54.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC----------------HHHHHHHHHHc---CCce---eEecCChh
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----------------KDKVDLLKNKF---GFDE---AFNYKEEA  136 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s----------------~~~~~~~~~~~---g~~~---~~~~~~~~  136 (269)
                      .+++++|+||++++|.++++.+...|++|++++++                .++.+.+.+.+   +...   ..|..+..
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            57899999999999999999999999999999876                55554443222   3221   23555542


Q ss_pred             hHHHHHHHHCC--CCccEEEeCCCc
Q 024337          137 DLNAALKRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       137 ~~~~~i~~~~~--~~~d~vid~~g~  159 (269)
                      +..+.+.+...  +++|++++++|.
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcc
Confidence            33333332211  379999999983

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.79  E-value=7.2e-05  Score=60.02  Aligned_cols=80  Identities=20%  Similarity=0.252  Sum_probs=54.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce----eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE----AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~----~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .+...    ..|..+..+..+.+.+..  -++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999998877654322   24321    234444312222222221  137


Q ss_pred             ccEEEeC-CC
Q 024337          150 IDVYFEN-VG  158 (269)
Q Consensus       150 ~d~vid~-~g  158 (269)
                      +|++|++ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998 44

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.79  E-value=1e-05  Score=63.13  Aligned_cols=100  Identities=18%  Similarity=0.134  Sum_probs=63.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHH---HHHHHHCC-CCccEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN---AALKRYFP-EGIDVYFE  155 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~---~~i~~~~~-~~~d~vid  155 (269)
                      +++++|+||+|++|..+++.+...|++|+++++++++.+.   .. .....|..+..+..   +.+.+..+ +++|++++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~   78 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---SN-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   78 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---EE-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc---cc-EEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            5789999999999999999999999999999988654210   00 00012222221222   22222222 47999999


Q ss_pred             CCCc--------h----h---------------HhhhHhhhhcCCEEEEEecccc
Q 024337          156 NVGG--------K----T---------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       156 ~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++|.        .    .               .+.+++.++++|+++.++....
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  133 (236)
T 1ooe_A           79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  133 (236)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9982        0    0               2334445556789998876544

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.78  E-value=6.7e-05  Score=59.13  Aligned_cols=80  Identities=23%  Similarity=0.288  Sum_probs=56.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDV  152 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~  152 (269)
                      +++++|+||++++|..+++.+...  |++|+.+++++++.+.+.++++...   ..|..+..+....+.+...  +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578999999999999999877666  4799999999988877765665432   2355544123332332211  37999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +++++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999984

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.78  E-value=0.00012  Score=55.97  Aligned_cols=92  Identities=18%  Similarity=0.162  Sum_probs=63.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|||+||+|.+|..+++.+...|.+|++++|++++.+.+.  -+... ..|..+. +. +.+     +++|++|+++|..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~-~~~-----~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL-SDL-----SDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH-HHH-----TTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh-hhh-----cCCCEEEECCcCC
Confidence            6999999999999999999999999999999987766542  23322 2344333 22 222     2599999999851


Q ss_pred             ---------hHhhhHhhhhc--CCEEEEEeccc
Q 024337          161 ---------TLDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       161 ---------~~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                               .....++.++.  .++++.++...
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~  105 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA  105 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence                     12445555555  36888886543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.78  E-value=0.00012  Score=58.41  Aligned_cols=81  Identities=19%  Similarity=0.267  Sum_probs=54.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      .+++++|+||+|++|..++..+...|++|++++++.++.+.+.+   ..+...   ..|..+..++.+.+.+...  +++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999998899999999988665443321   234321   2344443133333332211  369


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++|+++|.
T Consensus       113 d~li~~Ag~  121 (279)
T 3ctm_A          113 DVFVANAGV  121 (279)
T ss_dssp             SEEEECGGG
T ss_pred             CEEEECCcc
Confidence            999999873

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.78  E-value=0.00011  Score=59.08  Aligned_cols=77  Identities=17%  Similarity=0.150  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-eeEecCChhhHHHHHHHHCCCCccE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-EAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      -++++++|+||+|++|.+++..+...|++|++++++.++.+.+.+++    +.. ...|..+. +   .+.+... .+|+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~-~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-A---SRAEAVK-GAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-H---HHHHHTT-TCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-H---HHHHHHH-hCCE
Confidence            36789999999999999999999999999999999988766554333    322 23455443 2   2222222 4899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +++|+|.
T Consensus       192 lVn~ag~  198 (287)
T 1lu9_A          192 VFTAGAI  198 (287)
T ss_dssp             EEECCCT
T ss_pred             EEECCCc
Confidence            9999973

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.77  E-value=6.9e-05  Score=59.61  Aligned_cols=81  Identities=17%  Similarity=0.214  Sum_probs=54.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|..+++.+...|++|+++++ +.++.+.+.+   ..+...   ..|..+..+....+.+...  ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999887 5555444332   233322   2355554223322332211  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       107 id~lv~nAg~  116 (269)
T 4dmm_A          107 LDVLVNNAGI  116 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.77  E-value=0.00014  Score=58.13  Aligned_cols=81  Identities=19%  Similarity=0.195  Sum_probs=54.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCce---eEecCChhhHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEADLNA  140 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~  140 (269)
                      .+++++|+||++++|.++++.+...|++|++++++            .++.+...+   ..+...   ..|..+..+...
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            47899999999999999999999999999999986            444333221   334332   235555422333


Q ss_pred             HHHHHCC--CCccEEEeCCCc
Q 024337          141 ALKRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       141 ~i~~~~~--~~~d~vid~~g~  159 (269)
                      .+.+...  +++|++++++|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            3332211  379999999983

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.77  E-value=0.00011  Score=58.37  Aligned_cols=80  Identities=18%  Similarity=0.276  Sum_probs=54.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++++ ++++.+.+.++   .+...   ..|..+..++.+.+.+...  ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999998 66665443322   34331   2354443133333332211  36


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|+++|
T Consensus       100 ~d~vi~~Ag  108 (274)
T 1ja9_A          100 LDFVMSNSG  108 (274)
T ss_dssp             EEEEECCCC
T ss_pred             CCEEEECCC
Confidence            999999997

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.77  E-value=6.2e-05  Score=60.63  Aligned_cols=45  Identities=13%  Similarity=0.116  Sum_probs=38.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNK  123 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~  123 (269)
                      .+++++|+||++++|.++++.+...|++|++++ +++++.+.+.++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~   53 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   53 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999 998876655433

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.77  E-value=9.8e-05  Score=58.00  Aligned_cols=76  Identities=17%  Similarity=0.301  Sum_probs=52.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++++.    + ..+... ..|..+..++.+.+.+..  -+++|++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999987552    2 334321 245555423333333221  137999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        81 ~Ag~   84 (250)
T 2fwm_X           81 AAGI   84 (250)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9983

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.76  E-value=0.00012  Score=55.75  Aligned_cols=99  Identities=16%  Similarity=0.237  Sum_probs=71.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~  146 (269)
                      ....+.++++||-.|+  |.|..++.+++. +.+|++++.+++..+.+++.   +|..   .++..+.. +   .+..  
T Consensus        49 ~~l~~~~~~~vLDlGc--G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~-~---~~~~--  119 (204)
T 3njr_A           49 AALAPRRGELLWDIGG--GSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP-A---ALAD--  119 (204)
T ss_dssp             HHHCCCTTCEEEEETC--TTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT-G---GGTT--
T ss_pred             HhcCCCCCCEEEEecC--CCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh-h---hccc--
Confidence            4567889999999997  448889999988 89999999999988887643   3443   22322221 1   1111  


Q ss_pred             CCCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+.||+|+...+.  ..+..+.+.|+++|+++....
T Consensus       120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            1269999976653  367889999999999987644

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.76  E-value=0.00021  Score=56.04  Aligned_cols=74  Identities=24%  Similarity=0.343  Sum_probs=52.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      -++++++|+||+|++|..+++.+...|++|++++++++.   ++ +++.... .|. .. +....+.+..  ++|+++++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEEC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEEC
Confidence            457899999999999999999999999999999998743   33 4442222 233 21 3333333322  69999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        89 Ag~   91 (249)
T 1o5i_A           89 AGG   91 (249)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            983

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.76  E-value=5.3e-05  Score=60.86  Aligned_cols=81  Identities=14%  Similarity=0.165  Sum_probs=54.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHc----CCce---eEecCC----hhhHHHHHHHHC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNKF----GFDE---AFNYKE----EADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~~~----g~~~---~~~~~~----~~~~~~~i~~~~  146 (269)
                      ++++++|+||++++|.++++.+...|++|+++++++ ++.+.+.+++    +...   ..|..+    ..++...+.+..
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999987 6554443233    3221   235444    312222232221


Q ss_pred             --CCCccEEEeCCCc
Q 024337          147 --PEGIDVYFENVGG  159 (269)
Q Consensus       147 --~~~~d~vid~~g~  159 (269)
                        -+++|++|+++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence              1379999999983

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.75  E-value=0.00011  Score=57.30  Aligned_cols=79  Identities=15%  Similarity=0.176  Sum_probs=55.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCC-------EEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGC-------YVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~-------~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~  146 (269)
                      +++++|+||+|++|..+++.+...|+       +|+++++++++.+.+.+++   +.. .  ..|..+..++.+.+.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999999988999       9999999988776554343   322 1  234444312333333221


Q ss_pred             --CCCccEEEeCCC
Q 024337          147 --PEGIDVYFENVG  158 (269)
Q Consensus       147 --~~~~d~vid~~g  158 (269)
                        -+++|++|+++|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              136999999998

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.75  E-value=0.00011  Score=58.56  Aligned_cols=81  Identities=26%  Similarity=0.375  Sum_probs=54.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      .+++++|+||++++|..+++.+...|++|++++++ ++..+.+.+   +.+...   ..|..+..+..+.+.+..  .++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999984 444333321   334322   234444323333333322  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.75  E-value=0.00012  Score=65.09  Aligned_cols=104  Identities=22%  Similarity=0.281  Sum_probs=62.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---------SKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---------s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      .+++++|+||++++|.++++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+..+..+.+.+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999876         4443333221   344445566665423344444333


Q ss_pred             C--CCccEEEeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEeccc
Q 024337          147 P--EGIDVYFENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       147 ~--~~~d~vid~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                      .  +++|++|+++|..   .                       .+.++..|+.  .|++|.++...
T Consensus        98 ~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a  163 (613)
T 3oml_A           98 KAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNS  163 (613)
T ss_dssp             -------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHH
T ss_pred             HHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence            2  3799999999841   0                       2345555554  48999887644

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.75  E-value=0.00012  Score=57.19  Aligned_cols=79  Identities=18%  Similarity=0.182  Sum_probs=53.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---cCCce----eEecCChhhHHHHHHHHC--CCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNK---FGFDE----AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~---~g~~~----~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +++++|+||+|++|..+++.+...|++|+++ .+++++.+.+.++   .+...    ..|..+..+..+.+.+..  -++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999998 7887766544322   23321    224444312222222221  136


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|+++|
T Consensus        81 ~d~li~~Ag   89 (245)
T 2ph3_A           81 LDTLVNNAG   89 (245)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.75  E-value=0.00016  Score=58.44  Aligned_cols=81  Identities=15%  Similarity=0.179  Sum_probs=54.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCce---eEecCChhhHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEADLNA  140 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~  140 (269)
                      .+++++|+||++++|.++++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+..+...
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999876            454443321   334322   245555423333


Q ss_pred             HHHHHCC--CCccEEEeCCCc
Q 024337          141 ALKRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       141 ~i~~~~~--~~~d~vid~~g~  159 (269)
                      .+.+...  +++|++++++|.
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHhCCCCEEEECCCC
Confidence            3332211  379999999983

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.75  E-value=0.00011  Score=59.93  Aligned_cols=80  Identities=23%  Similarity=0.270  Sum_probs=54.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe---------CCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA---------GSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~---------~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      .+++++|+||+|++|..+++.+...|++|++++         ++.++.+.+.+   ..+.....|..+..+....+.+..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999964         35554443322   234334566665423333332221


Q ss_pred             --CCCccEEEeCCC
Q 024337          147 --PEGIDVYFENVG  158 (269)
Q Consensus       147 --~~~~d~vid~~g  158 (269)
                        -+++|++|+++|
T Consensus        88 ~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHTSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              137999999998

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.74  E-value=0.00016  Score=57.70  Aligned_cols=105  Identities=17%  Similarity=0.242  Sum_probs=68.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCce---eEecCChhhHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEADLNA  140 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~  140 (269)
                      .++++||+||++++|..+++.+...|++|++++++            .++.+...+   ..+...   ..|..+..+..+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999876            554443321   334322   235555423333


Q ss_pred             HHHHHCC--CCccEEEeCCCch----------------------hHhhhHhhhhc---CCEEEEEecccc
Q 024337          141 ALKRYFP--EGIDVYFENVGGK----------------------TLDAVLPNMKI---RGRIAACGMISQ  183 (269)
Q Consensus       141 ~i~~~~~--~~~d~vid~~g~~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  183 (269)
                      .+.+...  +++|++++++|..                      ..+.+++.|.+   +|++|.++....
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            3332211  3799999999841                      02334444433   689999876544

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.74  E-value=7.5e-05  Score=59.94  Aligned_cols=80  Identities=21%  Similarity=0.302  Sum_probs=54.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHcCCce---eEecCChhhHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-----------VDLLKNKFGFDE---AFNYKEEADLNAALKR  144 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-----------~~~~~~~~g~~~---~~~~~~~~~~~~~i~~  144 (269)
                      ++++++|+||++++|..+++.+...|++|++++++.++           .+.++ ..+...   ..|..+..+..+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999988652           22233 344422   2355554233333332


Q ss_pred             HCC--CCccEEEeCCCc
Q 024337          145 YFP--EGIDVYFENVGG  159 (269)
Q Consensus       145 ~~~--~~~d~vid~~g~  159 (269)
                      ...  +++|++++++|.
T Consensus        87 ~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            211  379999999983

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.74  E-value=0.00016  Score=57.08  Aligned_cols=81  Identities=15%  Similarity=0.181  Sum_probs=54.4

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||+  |++|..+++.+...|++|++++++++   ..+.+.++.+...  ..|..+..++.+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999998  99999999999889999999998875   3344432334322  2355554123332332211  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.72  E-value=9.7e-05  Score=58.56  Aligned_cols=99  Identities=16%  Similarity=0.217  Sum_probs=64.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++      ..... ...|..+..++.+.+.+...  +++|++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            36899999999999999999999999999999987654      01111 12355543133333332211  36999999


Q ss_pred             CCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          156 NVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       156 ~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++|..   .                       .+.+++.+++  .|++|.++....
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  136 (264)
T 2dtx_A           81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA  136 (264)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh
Confidence            99831   0                       2334445543  589999877544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.72  E-value=0.00012  Score=58.12  Aligned_cols=107  Identities=12%  Similarity=0.158  Sum_probs=69.8

Q ss_pred             CCCCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHHcCCce--eEecCChhhHHHHHHHHC--C
Q 024337           77 AKHGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL---KNKFGFDE--AFNYKEEADLNAALKRYF--P  147 (269)
Q Consensus        77 ~~~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~---~~~~g~~~--~~~~~~~~~~~~~i~~~~--~  147 (269)
                      ..++++++|+||+  +++|..+++.+...|++|+++++++...+.+   .++.+...  ..|..+..+....+.+..  -
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4568999999998  9999999999999999999999875433333   22334322  345555423333333221  1


Q ss_pred             CCccEEEeCCCc-h-----------h-------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          148 EGIDVYFENVGG-K-----------T-------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       148 ~~~d~vid~~g~-~-----------~-------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +++|++|+++|. .           .                   .+.+++.++++|+++.++....
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  157 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA  157 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc
Confidence            379999999983 1           0                   1334455556889998876544

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.72  E-value=0.0001  Score=58.97  Aligned_cols=82  Identities=12%  Similarity=0.132  Sum_probs=54.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCC--C
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      ..+++++|+||++++|..+++.+...|++|+++++ ++++.+.+.++   .+...   ..|..+..+..+.+.+...  +
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999985 66655443322   33321   2355543233333332211  3


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++++++|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            69999999984

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.71  E-value=8.1e-05  Score=61.01  Aligned_cols=45  Identities=13%  Similarity=0.116  Sum_probs=39.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNK  123 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~  123 (269)
                      .++++||+||++++|.++++.+...|++|++++ +++++.+.+.++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~   90 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   90 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999 998877655433

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.71  E-value=0.00012  Score=58.27  Aligned_cols=79  Identities=14%  Similarity=0.213  Sum_probs=53.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .+++++|+||++++|..+++.+...|++|+++++++...+.++ ++   +...   ..|..+. +..+.+.+..  .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADL-EGAANVAEELAATRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCH-HHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCH-HHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999997654333333 33   3221   2344443 2222222211  1479


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999984

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.71  E-value=0.00016  Score=59.10  Aligned_cols=79  Identities=20%  Similarity=0.316  Sum_probs=53.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC-
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-----KDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP-  147 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-----~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~-  147 (269)
                      +++++|+||+|++|..+++.+...|++|++++++     .++.+.+.+   ..+...   ..|..+..++.+.+.+... 
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998775     333333321   234321   2355554233333333221 


Q ss_pred             -CCccEEEeCCC
Q 024337          148 -EGIDVYFENVG  158 (269)
Q Consensus       148 -~~~d~vid~~g  158 (269)
                       +++|++++++|
T Consensus        85 ~g~iD~lVnnAG   96 (324)
T 3u9l_A           85 DGRIDVLIHNAG   96 (324)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999998

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.70  E-value=0.00051  Score=52.86  Aligned_cols=97  Identities=13%  Similarity=0.150  Sum_probs=67.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCc-eeEecCChhhHHHHHHHHCCCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ++.+||-.|+  |.|..+..+++.+  +.+|++++.+++..+.+++.+   |.. .-+..... +..+.+....++.||+
T Consensus        56 ~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~~~fD~  132 (221)
T 3dr5_A           56 GSTGAIAITP--AAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLANDSYQL  132 (221)
T ss_dssp             TCCEEEEEST--THHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCTTCEEE
T ss_pred             CCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcCCCcCe
Confidence            4459999885  7799999999986  679999999999888776433   443 22333232 4444443332458999


Q ss_pred             EEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337          153 YFENVGG----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       153 vid~~g~----~~~~~~~~~l~~~G~~v~~  178 (269)
                      ||-....    ..++.+.+.|+++|.++.-
T Consensus       133 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          133 VFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             EEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             EEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            8865543    3578889999999998863

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.69  E-value=0.00016  Score=57.75  Aligned_cols=82  Identities=11%  Similarity=0.138  Sum_probs=56.3

Q ss_pred             CCCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCce--eEecCChhhHHHHHHHHC--CCC
Q 024337           78 KHGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        78 ~~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      -++++++|+||+  +|+|..+++.+...|++|++++++.  +..+.+.++.+...  ..|..+..+..+.+.+..  -++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            357899999998  6699999999999999999999887  55565553444322  245555423333333221  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999983

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.69  E-value=0.0002  Score=57.09  Aligned_cols=80  Identities=25%  Similarity=0.311  Sum_probs=54.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-------HH----HHHHHcCCc---eeEecCChhhHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-------VD----LLKNKFGFD---EAFNYKEEADLNAALKR  144 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-------~~----~~~~~~g~~---~~~~~~~~~~~~~~i~~  144 (269)
                      ++++++|+||++++|..+++.+...|++|++++++.++       .+    .++ ..+..   ...|..+..+....+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            47899999999999999999999999999999987642       22    222 33432   13455554223333332


Q ss_pred             HCC--CCccEEEeCCCc
Q 024337          145 YFP--EGIDVYFENVGG  159 (269)
Q Consensus       145 ~~~--~~~d~vid~~g~  159 (269)
                      ...  +++|++++++|.
T Consensus        84 ~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCc
Confidence            211  379999999983

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.69  E-value=9.2e-05  Score=56.20  Aligned_cols=143  Identities=14%  Similarity=0.169  Sum_probs=88.4

Q ss_pred             CCCCCeEEeccceeeEEE-ecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHHH
Q 024337           20 FSKGDLVWGMTGWEEYSL-ITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLVG   97 (269)
Q Consensus        20 ~~~Gd~V~~~g~~~~~~~-v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i   97 (269)
                      ++.|+.+.....|.+|.. .+....+.+ +.+  +.+....    ..+....+... ..+.++++||-.|+  |.|..+.
T Consensus         6 ~~~~~~~~~~p~w~~~~~~~~~~~~~~~-~~~--~~f~~~~----~~~~~~~~~~l~~~~~~~~~vLDiG~--G~G~~~~   76 (205)
T 3grz_A            6 INLSRHLAIVPEWEDYQPVFKDQEIIRL-DPG--LAFGTGN----HQTTQLAMLGIERAMVKPLTVADVGT--GSGILAI   76 (205)
T ss_dssp             EEEETTEEEEETTCCCCCSSTTCEEEEE-SCC-------CC----HHHHHHHHHHHHHHCSSCCEEEEETC--TTSHHHH
T ss_pred             EEECCcEEEeccccccccCCCCceeEEe-cCC--cccCCCC----CccHHHHHHHHHHhccCCCEEEEECC--CCCHHHH
Confidence            556777777777888877 677777778 444  3321111    11111122111 12678999999997  3477777


Q ss_pred             HHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCc--eeEecCChhhHHHHHHHHCCCCccEEEeCCCc----hhHhhhHh
Q 024337           98 QFAKLLGC-YVVGSAGSKDKVDLLKNKF---GFD--EAFNYKEEADLNAALKRYFPEGIDVYFENVGG----KTLDAVLP  167 (269)
Q Consensus        98 ~~a~~~G~-~V~~~~~s~~~~~~~~~~~---g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~----~~~~~~~~  167 (269)
                      .+++. +. +|++++.+++..+.+++.+   +..  ..+..+-. +       ...+.||+|+.....    ..+..+.+
T Consensus        77 ~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~  147 (205)
T 3grz_A           77 AAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL-A-------DVDGKFDLIVANILAEILLDLIPQLDS  147 (205)
T ss_dssp             HHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT-T-------TCCSCEEEEEEESCHHHHHHHGGGSGG
T ss_pred             HHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc-c-------cCCCCceEEEECCcHHHHHHHHHHHHH
Confidence            77764 55 9999999999888777432   432  22222211 1       123489999977654    34677888


Q ss_pred             hhhcCCEEEEEec
Q 024337          168 NMKIRGRIAACGM  180 (269)
Q Consensus       168 ~l~~~G~~v~~g~  180 (269)
                      .|+++|+++....
T Consensus       148 ~L~~gG~l~~~~~  160 (205)
T 3grz_A          148 HLNEDGQVIFSGI  160 (205)
T ss_dssp             GEEEEEEEEEEEE
T ss_pred             hcCCCCEEEEEec
Confidence            9999999988644

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.69  E-value=0.00021  Score=63.48  Aligned_cols=104  Identities=22%  Similarity=0.275  Sum_probs=67.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHH---HcCCceeEecCChhh---HHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---------DKVDLLKN---KFGFDEAFNYKEEAD---LNAALK  143 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~---------~~~~~~~~---~~g~~~~~~~~~~~~---~~~~i~  143 (269)
                      .+++++|+||++|+|.+.++.+...|++|++.+++.         ++.+.+.+   ..|...+.|..+..+   +.+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999987654         33332221   334444555554312   233333


Q ss_pred             HHCCCCccEEEeCCCc---hh-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          144 RYFPEGIDVYFENVGG---KT-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~---~~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      +.. +++|++++++|-   ..                       .+.+++.|++  +|++|.++...+
T Consensus        87 ~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag  153 (604)
T 2et6_A           87 KNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG  153 (604)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            222 479999999983   10                       2456666643  589999876543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.68  E-value=2.7e-05  Score=61.89  Aligned_cols=76  Identities=16%  Similarity=0.195  Sum_probs=50.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCC--CCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP--EGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~--~~~d~vid~  156 (269)
                      .+++++|+||++++|.++++.+...|++|++++++.+..+... .+    ..|..+..+....+.+...  +++|+++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL----PGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            5789999999999999999999999999999998755332211 11    2233333122222222111  369999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus       102 Ag~  104 (266)
T 3uxy_A          102 AGV  104 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            984

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.68  E-value=0.00015  Score=56.46  Aligned_cols=104  Identities=14%  Similarity=0.154  Sum_probs=71.8

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHC-
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYF-  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~-  146 (269)
                      ...+..++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   |....+..... +..+.+.+.. 
T Consensus        54 ~l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~  130 (239)
T 2hnk_A           54 ILTKISGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLID  130 (239)
T ss_dssp             HHHHHHTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhhCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHh
Confidence            3445678899999996  4799999999987  579999999999888777443   54321222121 3333333221 


Q ss_pred             -------------C-CCccEEEeCCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          147 -------------P-EGIDVYFENVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       147 -------------~-~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                                   + +.||+|+.....    ..+..+.+.|+++|.++...
T Consensus       131 ~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          131 SKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             CSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                         1 579999887663    45678889999999998753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.68  E-value=0.00013  Score=57.23  Aligned_cols=81  Identities=21%  Similarity=0.289  Sum_probs=53.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|..+++.+...|++|+++++ +.++.+.+.+   ..+...   ..|..+..+....+.+...  ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999998876 4454444332   334322   2344443233333332211  37


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.67  E-value=0.00022  Score=55.98  Aligned_cols=104  Identities=12%  Similarity=0.091  Sum_probs=71.5

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....+.++.+||-+|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   |...-+..... +..+.+....+
T Consensus        57 ~l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~  133 (248)
T 3tfw_A           57 LLVRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGE  133 (248)
T ss_dssp             HHHHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCS
T ss_pred             HHHhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCC
Confidence            3445678899999996  5688899999887  569999999999888877433   54321222222 44444444333


Q ss_pred             -CCccEEEeCCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          148 -EGIDVYFENVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       148 -~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                       +.||+|+-....    ..+..+.+.|+++|.++.-.
T Consensus       134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          134 CPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence             289998844332    45788899999999887653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.67  E-value=0.00083  Score=53.67  Aligned_cols=95  Identities=9%  Similarity=0.025  Sum_probs=63.1

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc----eeEecCChhhHHHHHHHHCCCCccE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      -.+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++..    .+...... ++.+.+.+     +|+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~-----~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIAA-----ADG  197 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHHH-----SSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHhc-----CCE
Confidence            35789999998 9999999999999999 8999999999877654354321    12112212 44444443     899


Q ss_pred             EEeCCCchh-----HhhhHhhhhcCCEEEEEe
Q 024337          153 YFENVGGKT-----LDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       153 vid~~g~~~-----~~~~~~~l~~~G~~v~~g  179 (269)
                      |++|++...     .......++++..++.+-
T Consensus       198 VInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv  229 (283)
T 3jyo_A          198 VVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV  229 (283)
T ss_dssp             EEECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred             EEECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence            999997321     112244566666555553

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.67  E-value=0.00021  Score=58.19  Aligned_cols=81  Identities=20%  Similarity=0.225  Sum_probs=54.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HcCCce---eEecCChhhHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKVDLLKN---KFGFDE---AFNYKEEADLNA  140 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s------------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~  140 (269)
                      .++++||+||++++|..+++.+...|++|++++++            .++.+.+.+   ..+...   ..|..+..+...
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999865            444433321   334322   235555423333


Q ss_pred             HHHHHCC--CCccEEEeCCCc
Q 024337          141 ALKRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       141 ~i~~~~~--~~~d~vid~~g~  159 (269)
                      .+.+...  +++|++|+++|.
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            3332211  379999999983

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.66  E-value=0.00014  Score=56.75  Aligned_cols=81  Identities=17%  Similarity=0.273  Sum_probs=51.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|+++ .+++++.+.+.+   ..+...   ..|..+..++.+.+.+...  ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999999999999998 555554443321   234321   2344443123333332211  36


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999974

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.66  E-value=0.00019  Score=57.47  Aligned_cols=81  Identities=12%  Similarity=0.149  Sum_probs=54.4

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCce--eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      .+++++|+||+  |++|..+++.+...|++|++++++++   ..+.+.+..+...  ..|..+..++...+.+..  -++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999998  89999999999999999999998875   3333332334222  235555412332233221  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++|+++|.
T Consensus       100 iD~lv~~Ag~  109 (285)
T 2p91_A          100 LDIIVHSIAY  109 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.66  E-value=5.7e-05  Score=60.08  Aligned_cols=78  Identities=17%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      -.+++++||+||++++|.++++.+...|++|++++++++...    . ... ...|..+..+....+.+...  +++|++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            356899999999999999999999999999999998765431    1 111 13455554233333332211  379999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        86 v~nAg~   91 (269)
T 3vtz_A           86 VNNAGI   91 (269)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999983

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.65  E-value=0.00015  Score=56.26  Aligned_cols=103  Identities=14%  Similarity=0.127  Sum_probs=70.7

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHC-C
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYF-P  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~-~  147 (269)
                      ......++++||-.|+  |.|..+..+++.. +.+|++++.+++..+.+++.+   |....+..... +..+.+.... +
T Consensus        48 ~~~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~  124 (233)
T 2gpy_A           48 HLLKMAAPARILEIGT--AIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELY  124 (233)
T ss_dssp             HHHHHHCCSEEEEECC--TTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTS
T ss_pred             HHHhccCCCEEEEecC--CCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccC
Confidence            4455678899999997  4788999999987 679999999999888877433   44221111111 2222222222 2


Q ss_pred             CCccEEEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337          148 EGIDVYFENVGG----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       148 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  178 (269)
                      +.||+|+.....    ..+..+.+.|+++|+++..
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            479999876653    4567888999999999875

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.65  E-value=0.00075  Score=47.79  Aligned_cols=74  Identities=20%  Similarity=0.204  Sum_probs=56.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ..+++|.|+ |.+|..+++.+...|.+|+++++++++.+.++ +.+...+ .|..+.    +.+++..-.++|+++.+++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~----~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDE----SFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCH----HHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCH----HHHHhCCcccCCEEEEecC
Confidence            467999998 99999999999999999999999999998887 6666432 233332    2334332237999999999


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus        80 ~   80 (141)
T 3llv_A           80 D   80 (141)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.63  E-value=0.00036  Score=56.26  Aligned_cols=93  Identities=11%  Similarity=0.035  Sum_probs=64.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ++++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.+.++..  .+++      + +.+.+.. ..+|+||+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~------~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS------L-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC------H-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee------H-HHHHhhh-ccCCEEEE
Confidence            5789999998 9999999999999998 9999999998876665477652  2221      1 1122211 25899999


Q ss_pred             CCCchhH------hhhHhhhhcCCEEEEEec
Q 024337          156 NVGGKTL------DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~------~~~~~~l~~~G~~v~~g~  180 (269)
                      |++....      ......++++..++.+..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            9985321      112345667777777654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.63  E-value=6.7e-05  Score=59.34  Aligned_cols=100  Identities=19%  Similarity=0.293  Sum_probs=65.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHH---HHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN---AALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~---~~i~~~~~~~~d~vid  155 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.  +.+.+  ....|..+.++..   +.+.+.. +++|++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~-G~iDilVn   84 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEEL--FVEADLTTKEGCAIVAEATRQRL-GGVDVIVH   84 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SCTTT--EEECCTTSHHHHHHHHHHHHHHT-SSCSEEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CCcEE--EEEcCCCCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            689999999999999999999999999999999875421  11011  1234555541222   2222222 47999999


Q ss_pred             CCCc-h----h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          156 NVGG-K----T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       156 ~~g~-~----~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++|. .    .                       .+.+++.|..  +|++|.++....
T Consensus        85 nAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~  142 (261)
T 4h15_A           85 MLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQR  142 (261)
T ss_dssp             CCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhh
Confidence            8873 1    0                       2445555543  689999877554

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.63  E-value=0.00014  Score=55.00  Aligned_cols=96  Identities=15%  Similarity=0.110  Sum_probs=61.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++..... ..+... ..|..+. +   .+.+... ++|++|+++|.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~-~---~~~~~~~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQA-A---DVDKTVA-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSH-H---HHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCH-H---HHHHHHc-CCCEEEECccC
Confidence            68999999999999999999999999999999876543221 112211 2233332 2   2222222 58999999984


Q ss_pred             hh-----------HhhhHhhhhc--CCEEEEEeccc
Q 024337          160 KT-----------LDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       160 ~~-----------~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                      ..           ....++.+++  -++++.++...
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence            21           2333444443  35888887654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.63  E-value=0.00015  Score=57.36  Aligned_cols=81  Identities=11%  Similarity=0.130  Sum_probs=53.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHHcCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD----LLKNKFGFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~----~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++.++..    .+.+..+...   ..|..+..++.+.+.+..  -++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999999999999999999999999998644332    2221234321   235554323333333321  136


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.62  E-value=0.00017  Score=55.30  Aligned_cols=95  Identities=14%  Similarity=0.187  Sum_probs=61.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchh
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT  161 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  161 (269)
                      +|+|+||+|.+|..+++.+...|.+|++++|++++.+.+.   +. ..+..+-. +..+.+.+... ++|+||+++|...
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~-~~~~~D~~-d~~~~~~~~~~-~~d~vi~~ag~~~   75 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYN---NV-KAVHFDVD-WTPEEMAKQLH-GMDAIINVSGSGG   75 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCT---TE-EEEECCTT-SCHHHHHTTTT-TCSEEEECCCCTT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcC---Cc-eEEEeccc-CCHHHHHHHHc-CCCEEEECCcCCC
Confidence            6999999999999999999999999999999976543221   11 22222211 21233444333 6999999998521


Q ss_pred             ----------HhhhHhhhhcC--CEEEEEeccc
Q 024337          162 ----------LDAVLPNMKIR--GRIAACGMIS  182 (269)
Q Consensus       162 ----------~~~~~~~l~~~--G~~v~~g~~~  182 (269)
                                ....++.++..  +++|.++...
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence                      23344444443  5898887654

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.62  E-value=0.00029  Score=55.37  Aligned_cols=101  Identities=18%  Similarity=0.218  Sum_probs=73.4

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....+.++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   |....++.... ++.    +...
T Consensus        87 ~~~~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~~~  159 (255)
T 3mb5_A           87 AYAGISPGDFIVEAGV--GSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIY----EGIE  159 (255)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGG----GCCC
T ss_pred             HhhCCCCCCEEEEecC--CchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chh----hccC
Confidence            4567889999999997  4488999999885  569999999999888877443   54321222221 222    2222


Q ss_pred             -CCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          148 -EGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 -~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       +.||+|+...+.  ..+..+.+.|+++|+++....
T Consensus       160 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  195 (255)
T 3mb5_A          160 EENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP  195 (255)
T ss_dssp             CCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence             379999987775  588999999999999988643

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.61  E-value=0.00026  Score=56.33  Aligned_cols=83  Identities=19%  Similarity=0.197  Sum_probs=54.7

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCC--
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--  147 (269)
                      ..++++++|+||+|++|..+++.+...|++|+++ .++.+..+.+.+.   .+...   ..|..+..+....+.+...  
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3467899999999999999999999999999877 6676665544322   23321   2344443233333332211  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++|+++|.
T Consensus       103 g~id~li~nAg~  114 (272)
T 4e3z_A          103 GRLDGLVNNAGI  114 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.61  E-value=0.00036  Score=49.46  Aligned_cols=75  Identities=12%  Similarity=0.134  Sum_probs=53.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +++|+|+|+ |.+|...++.+...|.+|+++++++++.+.++ +.+.. .+..+.. + .+.+.+..-+++|+++.|++.
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~-~~~~d~~-~-~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATH-AVIANAT-E-ENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSE-EEECCTT-C-HHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCE-EEEeCCC-C-HHHHHhcCCCCCCEEEECCCC
Confidence            467999998 99999999999999999999999888877665 55543 2322221 2 223333211369999999996

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.61  E-value=0.00013  Score=58.51  Aligned_cols=95  Identities=14%  Similarity=0.089  Sum_probs=64.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +|||+||+|.+|..+++.+... |.+|++++|++++...+. ..+... ..|..+.    +.+.+... ++|+||.+++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ----ESMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH----HHHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH----HHHHHHHh-CCCEEEEeCCC
Confidence            5899999999999999998887 899999999987655443 334332 2344443    23333332 69999999984


Q ss_pred             --------hhHhhhHhhhhcC--CEEEEEeccc
Q 024337          160 --------KTLDAVLPNMKIR--GRIAACGMIS  182 (269)
Q Consensus       160 --------~~~~~~~~~l~~~--G~~v~~g~~~  182 (269)
                              ......++.++..  ++++.++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                    1223445555543  4888887643

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.60  E-value=0.00027  Score=57.68  Aligned_cols=81  Identities=19%  Similarity=0.222  Sum_probs=53.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC----------HHHHHHHHH---HcCCce---eEecCChhhHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----------KDKVDLLKN---KFGFDE---AFNYKEEADLNAAL  142 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s----------~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i  142 (269)
                      .++++||+||++++|.++++.+...|++|++++++          .++.+.+.+   ..+...   ..|..+..+..+.+
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            57899999999999999999999999999999876          344333322   334322   23444431222223


Q ss_pred             HHHCC--CCccEEEeCCCc
Q 024337          143 KRYFP--EGIDVYFENVGG  159 (269)
Q Consensus       143 ~~~~~--~~~d~vid~~g~  159 (269)
                      .+...  +++|++|+++|.
T Consensus       106 ~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            32211  379999999983

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=97.60  E-value=0.00024  Score=55.16  Aligned_cols=103  Identities=14%  Similarity=0.127  Sum_probs=70.6

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHC--
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYF--  146 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~--  146 (269)
                      ..+..++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   |....+..... +..+.+.+..  
T Consensus        67 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~  143 (232)
T 3cbg_A           67 LISLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQG  143 (232)
T ss_dssp             HHHHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTS
T ss_pred             HHHhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhc
Confidence            344567889999996  5899999999987  569999999999888776433   54322222222 3333344332  


Q ss_pred             C--CCccEEEeCCC-c---hhHhhhHhhhhcCCEEEEEe
Q 024337          147 P--EGIDVYFENVG-G---KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       147 ~--~~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +  +.||+|+-... .   ..+..+.+.|+++|.++.-.
T Consensus       144 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          144 KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence            1  47999884433 2   45788899999999998753

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.59  E-value=0.00023  Score=56.32  Aligned_cols=81  Identities=20%  Similarity=0.291  Sum_probs=53.9

Q ss_pred             CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHcCCce---eEecCChhhHHHHHHHHC--
Q 024337           79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK-----VDLLKNKFGFDE---AFNYKEEADLNAALKRYF--  146 (269)
Q Consensus        79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~-----~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--  146 (269)
                      ++++++|+||+  +++|..+++.+...|++|++++++.++     .+.+.+..+...   ..|..+..+..+.+.+..  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999998  899999999999999999999877432     333332344422   245555423333333221  


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      -+++|++|+++|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1379999999983

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.59  E-value=0.00011  Score=58.12  Aligned_cols=81  Identities=12%  Similarity=0.215  Sum_probs=54.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHH---HH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLG---CYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALK---RY  145 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G---~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~---~~  145 (269)
                      -++++++|+||+|++|..+++.+...|   ++|++++++.++.+.++ ++   +.. .  ..|..+..++.+.+.   +.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            356799999999999999999999999   99999999876544333 22   222 1  234444323333333   22


Q ss_pred             CCC-CccEEEeCCCc
Q 024337          146 FPE-GIDVYFENVGG  159 (269)
Q Consensus       146 ~~~-~~d~vid~~g~  159 (269)
                      .+. ++|++|+++|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            222 59999999983

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.58  E-value=0.00017  Score=56.39  Aligned_cols=80  Identities=15%  Similarity=0.174  Sum_probs=56.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc-CCc-e--eEecCChhhHHHHHH---HHCCC-
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF-GFD-E--AFNYKEEADLNAALK---RYFPE-  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~-g~~-~--~~~~~~~~~~~~~i~---~~~~~-  148 (269)
                      ++++++|+||+|++|..+++.+...|  ++|++++++.++.+.++ ++ +.. .  ..|..+..++.+.+.   +..+. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999999999999  99999999988777766 44 222 1  234444312222222   22221 


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++|+++|.
T Consensus        81 ~id~li~~Ag~   91 (250)
T 1yo6_A           81 GLSLLINNAGV   91 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCcc
Confidence            69999999973

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.58  E-value=0.00027  Score=55.57  Aligned_cols=105  Identities=18%  Similarity=0.163  Sum_probs=65.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCH--HHHHHHHHHc-CCc-e--eEecCCh-hhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSK--DKVDLLKNKF-GFD-E--AFNYKEE-ADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~--~~~~~~~~~~-g~~-~--~~~~~~~-~~~~~~i~~~~~--~  148 (269)
                      ++++++|+||+|++|..+++.+...|++ |+++++++  +..+.+.+.. +.. .  ..|..+. .+..+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999996 99998875  3444444232 221 1  2344432 133333332211  3


Q ss_pred             CccEEEeCCCc---hh---------------HhhhHhhhhc-----CCEEEEEecccc
Q 024337          149 GIDVYFENVGG---KT---------------LDAVLPNMKI-----RGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  183 (269)
                      ++|++|+++|.   +.               .+.+++.+.+     +|+++.++....
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence            69999999983   11               2334444432     588998877544

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.57  E-value=0.00023  Score=55.86  Aligned_cols=105  Identities=15%  Similarity=0.222  Sum_probs=64.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCce---eEecCChhhHH---HHHHHHC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFDE---AFNYKEEADLN---AALKRYF--  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~---~~i~~~~--  146 (269)
                      ++++++|+||++++|..+++.+...|++|+++ .++.++.+...+   +.+...   ..|..+..+..   +.+.+..  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            57899999999999999999999999999886 455554443321   223321   12333321222   2222111  


Q ss_pred             ---CCCccEEEeCCCch---h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          147 ---PEGIDVYFENVGGK---T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       147 ---~~~~d~vid~~g~~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                         .+++|++++++|..   .                       .+.+++.++++|+++.++....
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence               12599999999831   0                       1334445556789999877544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.56  E-value=0.00013  Score=57.47  Aligned_cols=78  Identities=15%  Similarity=0.138  Sum_probs=52.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC-CCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF-PEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~-~~~~d~vi  154 (269)
                      ++++++|+||++++|.++++.+...|++|++++++.++.  .+ .++...   ..|..+..+....+.... -+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VA-DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HH-HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HH-hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            468999999999999999999999999999999865432  33 455432   235555412222222111 14799999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      +++|.
T Consensus        85 ~nAg~   89 (257)
T 3tl3_A           85 NCAGT   89 (257)
T ss_dssp             ECGGG
T ss_pred             ECCCC
Confidence            99983

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.56  E-value=0.00025  Score=53.94  Aligned_cols=99  Identities=10%  Similarity=-0.014  Sum_probs=69.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....++++++||-.|+  |.|..+..+++. +.+|++++.+++..+.+++.+   +...  ++..+    ..+...  ..
T Consensus        71 ~~l~~~~~~~vLdiG~--G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d----~~~~~~--~~  141 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT--GSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD----GWQGWQ--AR  141 (210)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC----GGGCCG--GG
T ss_pred             HhcCCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC----cccCCc--cC
Confidence            4567889999999997  468888888887 889999999999888877433   4332  22221    111111  12


Q ss_pred             CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.||+|+.+... .......+.|+++|+++..-.
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence            479999987664 445678899999999887643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.56  E-value=0.0001  Score=56.75  Aligned_cols=95  Identities=16%  Similarity=0.132  Sum_probs=61.2

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++.+.+.  -+... ..|..+. +   .+.+... ++|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~-~---~~~~~~~-~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSL-D---EVCEVCK-GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCH-H---HHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCH-H---HHHHHhc-CCCEEEEeCcC
Confidence            68999999999999999999999999999999877543221  11111 2244333 2   2222222 59999999985


Q ss_pred             h------------hHhhhHhhhhcC--CEEEEEeccc
Q 024337          160 K------------TLDAVLPNMKIR--GRIAACGMIS  182 (269)
Q Consensus       160 ~------------~~~~~~~~l~~~--G~~v~~g~~~  182 (269)
                      .            .....++.++..  +++|.++...
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            2            123344444443  4888887543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.55  E-value=0.00032  Score=52.97  Aligned_cols=63  Identities=14%  Similarity=0.234  Sum_probs=46.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +++|+||+|++|..+++.+. .|++|++++++++           ....|..+..++.+.+.+.  +++|++|+++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999999998 9999999998754           1233444431333334443  46899999987

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.55  E-value=0.00022  Score=56.55  Aligned_cols=94  Identities=15%  Similarity=0.080  Sum_probs=69.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .++.+||..|+ |. |..+..+++.. |.+|++++.+++..+.++ +.+.. ..+..+.. ++     ....+.||+|+.
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchh-hC-----CCCCCceeEEEE
Confidence            67899999997 55 99999999986 789999999999999998 44432 22222211 11     012247999996


Q ss_pred             CCCchhHhhhHhhhhcCCEEEEEec
Q 024337          156 NVGGKTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ......+..+.+.|+++|+++....
T Consensus       155 ~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          155 IYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             eCChhhHHHHHHhcCCCcEEEEEEc
Confidence            5555788999999999999988754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.55  E-value=0.0017  Score=53.45  Aligned_cols=75  Identities=15%  Similarity=0.162  Sum_probs=51.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHc-------CCce-eEecCChhhHHHHHHHHC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKVDLLKNKF-------GFDE-AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----~~~~~~~~~~-------g~~~-~~~~~~~~~~~~~i~~~~  146 (269)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.    +..+.+. ..       +... ..|..+.    +.+.+..
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIRDL----TTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTTCH----HHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCCCH----HHHHHHh
Confidence            468999999999999999999999999999999853    3334443 22       2211 2333332    2333333


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      . ++|+||++++.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            3 69999999984

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.55  E-value=0.00028  Score=56.04  Aligned_cols=82  Identities=18%  Similarity=0.244  Sum_probs=53.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHCC--C
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      ..+++++|+||++++|..+++.+...|++|++++ ++.+..+...+.   .+.. .  ..|..+..+..+.+.+...  +
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999998 555544433212   2322 1  2455554223222322211  3


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++|+++|.
T Consensus       103 ~id~li~nAg~  113 (269)
T 3gk3_A          103 KVDVLINNAGI  113 (269)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999983

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=97.54  E-value=0.00079  Score=52.37  Aligned_cols=103  Identities=15%  Similarity=0.101  Sum_probs=69.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHC-
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYF-  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~-  146 (269)
                      ......++++||-.|+  +.|..+..+++.+  +.+|++++.+++..+.+++.+   |....+..... +..+.+.... 
T Consensus        64 ~l~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~  140 (237)
T 3c3y_A           64 FVLKLVNAKKTIEVGV--FTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQ  140 (237)
T ss_dssp             HHHHHTTCCEEEEECC--TTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhhCCCEEEEeCC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence            3345567889999985  6788889999886  579999999999888776433   55322222211 3333333321 


Q ss_pred             ----CCCccEEEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337          147 ----PEGIDVYFENVGG----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       147 ----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  178 (269)
                          .+.||+||-....    ..++.+.+.|+++|.++.-
T Consensus       141 ~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          141 GQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             STTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence                3479988855442    4578889999999988764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.54  E-value=0.00021  Score=56.03  Aligned_cols=95  Identities=17%  Similarity=0.213  Sum_probs=60.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  159 (269)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+       .....|..+..++.+.+.+. .+++|++|+++|. 
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------ADLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------CCTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------ccccCCcccHHHHHHHHHHc-CCCccEEEECCCCC
Confidence            47999999999999999999889999999998765321       01111211111222233333 2479999999984 


Q ss_pred             h------------------hHhhhHhhhhc--CCEEEEEecccc
Q 024337          160 K------------------TLDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       160 ~------------------~~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      .                  .++.+.+.++.  .++++.++....
T Consensus        74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  117 (255)
T 2dkn_A           74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA  117 (255)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence            2                  02333444444  389998876543

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=97.53  E-value=0.0012  Score=51.78  Aligned_cols=102  Identities=13%  Similarity=0.112  Sum_probs=69.0

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHC--
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYF--  146 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~--  146 (269)
                      .....++++||-.|+  +.|..++.+++.+  +.+|++++.+++..+.+++.   .|...-+..... +..+.+....  
T Consensus        74 l~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~  150 (247)
T 1sui_A           74 LLKLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKD  150 (247)
T ss_dssp             HHHHTTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHS
T ss_pred             HHHhhCcCEEEEeCC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhc
Confidence            345567889999995  6788999999986  67999999999988777643   344321222111 3333333221  


Q ss_pred             ---CCCccEEEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337          147 ---PEGIDVYFENVGG----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       147 ---~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  178 (269)
                         .+.||+||-....    ..+..+.+.|+++|.++.-
T Consensus       151 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          151 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             cCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence               3479988854432    4678899999999998864

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.53  E-value=0.00043  Score=55.87  Aligned_cols=101  Identities=11%  Similarity=0.050  Sum_probs=71.3

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ....++++++||-+|+  |.|..+..+++..|++|++++.+++..+.+++.+   |...-+..... ++.    +. .+.
T Consensus        66 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~~~  137 (302)
T 3hem_A           66 DKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-DEP  137 (302)
T ss_dssp             HTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-CCC
T ss_pred             HHcCCCCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-CCC
Confidence            4456789999999997  4699999999998999999999999888876432   33211111111 221    12 458


Q ss_pred             ccEEEeCCCc----------------hhHhhhHhhhhcCCEEEEEecc
Q 024337          150 IDVYFENVGG----------------KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       150 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ||+|+....-                ..+..+.+.|+|+|+++.....
T Consensus       138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            9999875321                3467888999999999987653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.53  E-value=0.00056  Score=56.39  Aligned_cols=77  Identities=10%  Similarity=0.131  Sum_probs=55.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHcCCc--e--eEecCChhhHHHHHHHHCCCCcc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLL-GC-YVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~-G~-~V~~~~~s~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      -.+++|||+||+|.+|..+++.+... |. +|+++++++.+.+.+.+.+...  .  ..|..+.    +.+.+... ++|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~l~~~~~-~~D   93 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL----ERLNYALE-GVD   93 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH----HHHHHHTT-TCS
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH----HHHHHHHh-cCC
Confidence            35789999999999999999988888 98 9999999988776665344321  1  2344432    23333333 599


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +||.+++.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.52  E-value=0.00041  Score=54.11  Aligned_cols=74  Identities=22%  Similarity=0.179  Sum_probs=51.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+.+|+|+||+|.+|..+++.+...  |.+|+++++++++.+.+.  -+... ..|..+. +   .+.+... ++|++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~-~---~~~~~~~-~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDA-D---SINPAFQ-GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSH-H---HHHHHHT-TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCH-H---HHHHHHc-CCCEEEE
Confidence            4678999999999999999999888  899999999877654331  12221 2344443 2   2222222 5899999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        76 ~a~~   79 (253)
T 1xq6_A           76 LTSA   79 (253)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            9873

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.51  E-value=0.00023  Score=54.40  Aligned_cols=102  Identities=18%  Similarity=0.197  Sum_probs=70.7

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....+.++++||..|+ | .|..+..+++..|  .+|++++.+++..+.+++.+   +...+ ..... +....+.  ..
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~  144 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVG-DGTLGYE--PL  144 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEES-CGGGCCG--GG
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--CC
Confidence            4457889999999997 4 6999999999886  79999999999888777432   33221 11111 1111111  12


Q ss_pred             CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.||+|+.+.+. .....+.+.|+++|+++..-.
T Consensus       145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            379999988775 445688899999999987643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.51  E-value=0.00032  Score=55.43  Aligned_cols=80  Identities=18%  Similarity=0.229  Sum_probs=53.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .+++++|+||++++|..+++.+...|++|++++++.+ ..+.+.+.+   +..   ...|..+..++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999999999976544 344443222   221   12455554233333333221  37


Q ss_pred             ccEEEeCCC
Q 024337          150 IDVYFENVG  158 (269)
Q Consensus       150 ~d~vid~~g  158 (269)
                      +|++|+++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=97.50  E-value=0.00041  Score=53.49  Aligned_cols=104  Identities=12%  Similarity=0.067  Sum_probs=70.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHC-
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYF-  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~-  146 (269)
                      ...+..++++||-.|+  |.|..++.+++..  +.+|++++.+++..+.+++.+   |...-+..... +..+.+.+.. 
T Consensus        63 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~  139 (229)
T 2avd_A           63 NLARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  139 (229)
T ss_dssp             HHHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHh
Confidence            3455678899999996  5889999999876  569999999999888777433   44221221111 3333333322 


Q ss_pred             -C--CCccEEEeCCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          147 -P--EGIDVYFENVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       147 -~--~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                       +  +.||+|+.....    ..+..+.+.|+++|.++...
T Consensus       140 ~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          140 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence             1  479998765442    46788999999999988754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.50  E-value=4.8e-05  Score=60.22  Aligned_cols=77  Identities=17%  Similarity=0.107  Sum_probs=51.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      .++++||+||+|++|..+++.+...|++|++++++.++...    .... ...|..+..+..+.+.+...  +++|++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            47899999999999999999999999999999987553221    1111 12344443123322332211  37999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus       103 nAg~  106 (260)
T 3un1_A          103 NAGV  106 (260)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9983

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.49  E-value=0.00033  Score=55.07  Aligned_cols=102  Identities=14%  Similarity=0.088  Sum_probs=72.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc----CCceeEecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~----g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      ....+.++++||..|+ | .|..+..+++..  +.+|++++.+++..+.+++.+    |...+ ..... ++.+.  ...
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~~--~~~  163 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG-KLEEA--ELE  163 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES-CGGGC--CCC
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC-chhhc--CCC
Confidence            4467889999999997 4 588999999885  569999999999888887443    53221 11111 21111  011


Q ss_pred             CCCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+.||+|+...+.  ..+..+.+.|+++|+++.+..
T Consensus       164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  199 (258)
T 2pwy_A          164 EAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP  199 (258)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            2379999986664  678899999999999988754

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.49  E-value=0.00022  Score=55.39  Aligned_cols=101  Identities=19%  Similarity=0.248  Sum_probs=70.5

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCC-
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPE-  148 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~-  148 (269)
                      ....+.++++||..|+ | .|..+..+++..+.+|++++.+++..+.+++.   .+...+ ..... +..   .....+ 
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~---~~~~~~~  157 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILG-DGS---KGFPPKA  157 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGG---GCCGGGC
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEC-Ccc---cCCCCCC
Confidence            4457889999999997 4 79999999998778999999999988877743   343221 11111 211   111112 


Q ss_pred             CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          149 GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +||+|+.+... .....+.+.|+++|+++..-.
T Consensus       158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            59999988775 455688899999999887533

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=97.48  E-value=0.00049  Score=52.86  Aligned_cols=106  Identities=13%  Similarity=0.092  Sum_probs=70.1

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      +.......++.+||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   |....+..... +..+.+...
T Consensus        50 l~~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~  126 (223)
T 3duw_A           50 LQLLVQIQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQI  126 (223)
T ss_dssp             HHHHHHHHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHH
T ss_pred             HHHHHHhhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHH
Confidence            333445678899999996  5788899999887  679999999999888776433   54321211111 333333222


Q ss_pred             C---CCCccEEEeCCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          146 F---PEGIDVYFENVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       146 ~---~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .   .+.||+|+-....    ..+..+.+.|+++|.++.-.
T Consensus       127 ~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          127 ENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             HHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             HhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            1   1469998854432    45788899999999777643

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.47  E-value=0.00068  Score=51.28  Aligned_cols=100  Identities=13%  Similarity=0.124  Sum_probs=70.7

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCc--eeEecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNK---FGFD--EAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~---~g~~--~~~~~~~~~~~~~~i~~~~  146 (269)
                      ....++++++||-.|+  |.|..++.+++.. +.+|++++.+++..+.+++.   .+.+  .++..+..    +.+..  
T Consensus        34 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~----~~~~~--  105 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA--GSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAP----EGLDD--  105 (204)
T ss_dssp             HHTTCCTTCEEEEETC--TTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTT----TTCTT--
T ss_pred             HHcCCCCCCEEEEECC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChh----hhhhc--
Confidence            4567889999999997  4588999999886 36999999999988887743   2432  12222211    11110  


Q ss_pred             CCCccEEEeCCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+.||+|+.....    ..+..+.+.|+++|+++....
T Consensus       106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            1369999987652    577889999999999998644

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.47  E-value=0.00066  Score=57.04  Aligned_cols=83  Identities=16%  Similarity=0.099  Sum_probs=56.7

Q ss_pred             cC-CCCCEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHH---------------H-HHHHHHcCCce---eEecCC
Q 024337           76 SA-KHGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDK---------------V-DLLKNKFGFDE---AFNYKE  134 (269)
Q Consensus        76 ~~-~~~~~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~~---------------~-~~~~~~~g~~~---~~~~~~  134 (269)
                      .+ +.++++||+||++|+|++++..+.. .|++|++++++.+.               . +.++ +.|...   ..|..+
T Consensus        56 ~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvtd  134 (422)
T 3s8m_A           56 VRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAFS  134 (422)
T ss_dssp             CCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTS
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCCC
Confidence            44 4688999999999999999999888 99999999876432               1 3344 556532   234444


Q ss_pred             hhh---HHHHHHHHCCCCccEEEeCCCc
Q 024337          135 EAD---LNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus       135 ~~~---~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      ..+   ..+.+.+..+|++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          135 DAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            312   2333444443579999999874

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=97.47  E-value=0.00053  Score=53.97  Aligned_cols=95  Identities=21%  Similarity=0.174  Sum_probs=65.9

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCccEE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      +.++++||-.|+ | .|..++.+++ .|++|++++.++...+.+++++   +..  +..... +..+.+   ..++||+|
T Consensus       118 ~~~~~~VLDiGc-G-~G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~~---~~~~fD~V  188 (254)
T 2nxc_A          118 LRPGDKVLDLGT-G-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAAL---PFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC-T-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHHG---GGCCEEEE
T ss_pred             cCCCCEEEEecC-C-CcHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-ChhhcC---cCCCCCEE
Confidence            678999999997 3 3777777776 5779999999999888777432   332  221111 333322   23479999


Q ss_pred             EeCCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          154 FENVGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       154 id~~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.+...    ..+..+.+.|+++|+++..+.
T Consensus       189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          189 VANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence            976532    456778889999999998765

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=97.46  E-value=0.00044  Score=53.17  Aligned_cols=104  Identities=12%  Similarity=0.097  Sum_probs=69.8

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ......++.+||-.|+  |.|..+..+++.+  +.+|++++.+++..+.+++.+   +....+..... +..+.+.....
T Consensus        58 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~  134 (225)
T 3tr6_A           58 LLVKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIH  134 (225)
T ss_dssp             HHHHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHT
T ss_pred             HHHHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhh
Confidence            3445567889999996  5688899999876  579999999999888776433   44321211111 33333333221


Q ss_pred             ----CCccEEEeCCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          148 ----EGIDVYFENVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       148 ----~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                          +.||+|+-....    ..+..+.+.|+++|.++.-.
T Consensus       135 ~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          135 AGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence                479998854442    45788889999999998643

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.46  E-value=0.00054  Score=55.72  Aligned_cols=100  Identities=13%  Similarity=0.142  Sum_probs=69.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ....+.++++||-.|+  |.|..+..+++..|++|++++.+++..+.+++.+   |....+..... ++    .+. ++.
T Consensus        84 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~----~~~-~~~  155 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----EDF-AEP  155 (318)
T ss_dssp             TTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GGC-CCC
T ss_pred             HhcCCCCcCEEEEEcc--cchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-Ch----HHC-CCC
Confidence            4456788999999997  4488889999888999999999999888887433   33211111111 21    111 257


Q ss_pred             ccEEEeC-----CCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFEN-----VGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+..     .+.    ..+..+.+.|+++|+++....
T Consensus       156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999876     331    456788899999999987654

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=97.44  E-value=0.00079  Score=50.00  Aligned_cols=98  Identities=17%  Similarity=0.208  Sum_probs=67.9

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc--eeEecCChhhHHHHHHHHCCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD--EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~--~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ..++++++||-.|+  |.|..+..+++. +.+|++++.+++..+.+++.+   +..  ..+. ...    ..+....++.
T Consensus        18 ~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~----~~l~~~~~~~   89 (185)
T 3mti_A           18 EVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGH----ENLDHYVREP   89 (185)
T ss_dssp             TTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCG----GGGGGTCCSC
T ss_pred             HhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcH----HHHHhhccCC
Confidence            46789999999996  568888888887 889999999999888776433   432  2222 211    1122223347


Q ss_pred             ccEEEeCCCc----------------hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG----------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+...+.                ..+..+.+.|+++|+++.+..
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999866321                235778899999999988754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.44  E-value=0.00032  Score=55.17  Aligned_cols=82  Identities=21%  Similarity=0.229  Sum_probs=51.9

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHH----HHHHHHcCCce---eEecCChhhHHHHHHHHC--
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKV----DLLKNKFGFDE---AFNYKEEADLNAALKRYF--  146 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~----~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--  146 (269)
                      ..+++++||+||++++|..+++.+...|++|++++ ++.++.    +.++ ..+...   ..|..+..+..+.+.+..  
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            35689999999999999999999999999999988 443332    2233 334321   234444312333333221  


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                      -+++|++++++|.
T Consensus        89 ~g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 VGEIDVLVNNAGI  101 (256)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1379999999983

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.43  E-value=0.00013  Score=57.53  Aligned_cols=75  Identities=15%  Similarity=0.153  Sum_probs=51.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid  155 (269)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.      .. ...|..+..++.+.+.+..  -+++|++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999987654321      11 1235554313333333221  136999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        94 nAg~   97 (253)
T 2nm0_A           94 NAGV   97 (253)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9883

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.43  E-value=0.00029  Score=52.99  Aligned_cols=102  Identities=16%  Similarity=0.199  Sum_probs=69.0

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ..++++++||-.|+  |.|..+..+++..+  .+|++++.+++..+.+++.+   +...-+..... ++. .+....++.
T Consensus        18 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~-~~~~~~~~~   93 (197)
T 3eey_A           18 MFVKEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-GHQ-NMDKYIDCP   93 (197)
T ss_dssp             HHCCTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-CGG-GGGGTCCSC
T ss_pred             hcCCCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHH-HHhhhccCC
Confidence            46789999999997  44888889998864  59999999999888776432   33111111111 211 111123347


Q ss_pred             ccEEEeCCCc----------------hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG----------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+...+.                ..+..+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            9999866532                457889999999999987754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.42  E-value=0.00014  Score=56.96  Aligned_cols=100  Identities=14%  Similarity=0.116  Sum_probs=63.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++++++|+||++++|..+++.+.. .|++|+.++++++ ..+    .+ .....|..+..+..+.+.....+++|+++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~----~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----NL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT----TE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc----cc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            467899999999999999987766 7889999887644 111    11 0113355554233333432223389999999


Q ss_pred             CCch---h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          157 VGGK---T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       157 ~g~~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +|..   .                       .+.+++.++++|++|.++....
T Consensus        78 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           78 AGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             CccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            9841   0                       2334455566789998876544

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.42  E-value=0.0024  Score=50.61  Aligned_cols=91  Identities=12%  Similarity=0.015  Sum_probs=63.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC--ceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.  ....+..   ++.       ...+|+||+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~-------~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE-------GQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT-------TCCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc-------ccCCCEEEE
Confidence            5789999998 9999999999999997 999999999987776656654  1222222   211       136999999


Q ss_pred             CCCchhHh----hhHhhhhcCCEEEEEec
Q 024337          156 NVGGKTLD----AVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~~----~~~~~l~~~G~~v~~g~  180 (269)
                      |++.....    .....++++..++.+..
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence            99852211    12345677776666543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.42  E-value=0.00082  Score=49.42  Aligned_cols=102  Identities=16%  Similarity=0.226  Sum_probs=70.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCc-eeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNK---FGFD-EAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~---~g~~-~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....+.++++||..|+  |.|..+..+++.. +.+|++++.+++..+.+++.   .+.. .+ ....  +..+.+.. ..
T Consensus        19 ~~~~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~--d~~~~~~~-~~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG--GSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ--GAPRAFDD-VP   92 (178)
T ss_dssp             HHHCCCTTEEEEEEST--TTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC--CTTGGGGG-CC
T ss_pred             HHhcccCCCeEEEeCC--CCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec--chHhhhhc-cC
Confidence            3456789999999997  4589999999887 56999999999988887743   2443 22 2111  11111221 11


Q ss_pred             CCccEEEeCCCc---hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFENVGG---KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.||+|+.....   ..++.+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            479999976654   468899999999999987644

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.42  E-value=0.0004  Score=55.02  Aligned_cols=81  Identities=14%  Similarity=0.105  Sum_probs=52.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      .+++++|+||++++|..+++.+...|++|++.+ ++.++.+...+.   .+.. .  ..|..+..+..+.+.+..  .++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999997654 555554433222   2322 1  235555423333333221  137


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       105 id~li~nAg~  114 (267)
T 4iiu_A          105 WYGVVSNAGI  114 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             ccEEEECCCC
Confidence            9999999983

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.41  E-value=0.0017  Score=53.93  Aligned_cols=93  Identities=14%  Similarity=0.161  Sum_probs=67.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      ..+|+|+|+ |.+|..+++.+.. ..+|.+.+++.++.+.++ +......+|..+...+.+.++     ++|+|++|+|.
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~l~~~~~-----~~DvVi~~~p~   87 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNFDKLVEVMK-----EFELVIGALPG   87 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCHHHHHHHHT-----TCSEEEECCCG
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCHHHHHHHHh-----CCCEEEEecCC
Confidence            457999998 9999999888754 568999999998888876 443333455554312333332     48999999997


Q ss_pred             -hhHhhhHhhhhcCCEEEEEec
Q 024337          160 -KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       160 -~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       .....+..+++.+-+++.+..
T Consensus        88 ~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           88 FLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             GGHHHHHHHHHHHTCEEEECCC
T ss_pred             cccchHHHHHHhcCcceEeeec
Confidence             556667778888889998754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.41  E-value=0.00043  Score=52.41  Aligned_cols=75  Identities=20%  Similarity=0.235  Sum_probs=52.3

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      ++++|+||+|++|..+++.+...  +|+++++++++.+.+.++++.. ...|..+..++.+.+.+  .+++|++|+++|.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~   76 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE--AGPLDLLVHAVGK   76 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH--HCSEEEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCc
Confidence            36899999999999988887666  9999999988877665455431 12344443133333333  2479999999983

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.41  E-value=0.00031  Score=55.33  Aligned_cols=100  Identities=9%  Similarity=0.023  Sum_probs=70.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ....+.++.+||-.|+  |.|..+..+++..+++|++++.+++..+.+++.+...   ..+..+-. +.     ....+.
T Consensus        49 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~-----~~~~~~  120 (266)
T 3ujc_A           49 SDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDIL-TK-----EFPENN  120 (266)
T ss_dssp             TTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT-TC-----CCCTTC
T ss_pred             HhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc-cC-----CCCCCc
Confidence            4456788999999996  5788999999887999999999999999998443221   12222111 11     111247


Q ss_pred             ccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+.+..-         ..+..+.+.|+++|+++....
T Consensus       121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            9999976432         246788899999999998764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.41  E-value=0.0011  Score=56.66  Aligned_cols=81  Identities=15%  Similarity=0.258  Sum_probs=54.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCce-eEecCChhhHH---HHHHHHCCCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFDE-AFNYKEEADLN---AALKRYFPEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~~-~~~~~~~~~~~---~~i~~~~~~~~d~  152 (269)
                      ++++++|+||+|++|..+++.+...|++|++++++..  ..+...++.+... ..|..+..+..   +.+.+..++++|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5789999999999999999999999999999987543  3333322555532 34544431333   2333333335999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +|+++|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999984

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.37  E-value=0.00053  Score=53.02  Aligned_cols=100  Identities=12%  Similarity=0.109  Sum_probs=68.8

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCC-cee--EecCChhhHHHHHHHHCCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGF-DEA--FNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~-~~~--~~~~~~~~~~~~i~~~~~~  148 (269)
                      ...++||++||=.|+  |.|..+..+++..|.  +|++++.+++..+.+++.... ..+  +..+.. +. .... ...+
T Consensus        72 ~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~p-~~~~-~~~~  146 (233)
T 4df3_A           72 ELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-FP-EKYR-HLVE  146 (233)
T ss_dssp             CCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-CG-GGGT-TTCC
T ss_pred             hcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-Cc-cccc-cccc
Confidence            356899999999997  668899999998875  899999999998888744322 111  211111 10 0111 1123


Q ss_pred             CccEEEeCCCc-----hhHhhhHhhhhcCCEEEEE
Q 024337          149 GIDVYFENVGG-----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       149 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  178 (269)
                      .+|+||.....     ..+.++.+.|+++|+++..
T Consensus       147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            79988865543     3577888999999999875

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.37  E-value=0.00096  Score=53.01  Aligned_cols=94  Identities=13%  Similarity=0.050  Sum_probs=62.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++++++|+|+ |++|.++++.+...|++|+++.++.++.+.+.++++....++..+. +   .+.+   +++|++++|+|
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~-~---~~~~---~~~DivVn~t~  189 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM-D---ELEG---HEFDLIINATS  189 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-G---GGTT---CCCSEEEECCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH-H---Hhcc---CCCCEEEECCC
Confidence            5789999998 8999999999999999999999999887665546654111121111 1   1111   46999999999


Q ss_pred             chhHh----hhHhhhhcCCEEEEEec
Q 024337          159 GKTLD----AVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~~~~~----~~~~~l~~~G~~v~~g~  180 (269)
                      .....    .....++++..++.+..
T Consensus       190 ~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          190 SGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             CGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            63321    11233555556666544

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.36  E-value=0.0039  Score=43.71  Aligned_cols=77  Identities=19%  Similarity=0.140  Sum_probs=53.8

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+.++.. .+..+.. + .+.+.+..-.++|+++.|++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~~d~~-~-~~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCT-K-IKTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTT-S-HHHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE-EEEcCCC-C-HHHHHHcCcccCCEEEEeeCC
Confidence            457999998 99999999999999999999999988887776345653 2222211 1 122332212369999999986


Q ss_pred             h
Q 024337          160 K  160 (269)
Q Consensus       160 ~  160 (269)
                      .
T Consensus        80 ~   80 (140)
T 1lss_A           80 E   80 (140)
T ss_dssp             H
T ss_pred             c
Confidence            3

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.36  E-value=0.0017  Score=57.69  Aligned_cols=103  Identities=20%  Similarity=0.225  Sum_probs=65.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HH-HHHHHHHHcCCceeEecCCh-hh---HHHHHHHHCCCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KD-KVDLLKNKFGFDEAFNYKEE-AD---LNAALKRYFPEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~-~~~~~~~~~g~~~~~~~~~~-~~---~~~~i~~~~~~~~d~  152 (269)
                      .+++++|+||++|+|.++++.+...|++|++.++. .+ -.+.++ +.|........+- .+   +.+.+.+.. +++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence            36789999999999999999999999999998742 22 233444 4454332222211 02   222222222 47999


Q ss_pred             EEeCCCc---hh-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          153 YFENVGG---KT-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       153 vid~~g~---~~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      +++++|-   ..                       .+.+++.|+.  +|++|.++...+
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag  457 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG  457 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            9999983   10                       2445666643  589999876543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.35  E-value=0.00051  Score=54.83  Aligned_cols=95  Identities=19%  Similarity=0.250  Sum_probs=63.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|||+||+|.+|..+++.+...  |.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP----ESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH----HHHHHHHh-cCCEEEEcCC
Confidence            5899999999999999988887  899999999877666554 444432 2344443    23333332 5899999998


Q ss_pred             ch-----h---HhhhHhhhhcC--CEEEEEeccc
Q 024337          159 GK-----T---LDAVLPNMKIR--GRIAACGMIS  182 (269)
Q Consensus       159 ~~-----~---~~~~~~~l~~~--G~~v~~g~~~  182 (269)
                      ..     .   ....++.++..  ++++.++...
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            41     1   22334444433  4888887643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.35  E-value=0.00033  Score=57.42  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=51.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHHcCCc-e--eEecCChhhHHHHHHHHCCCCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD----LLKNKFGFD-E--AFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~----~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      .+.+|||+||+|.+|..+++.+...|++|++++++.++..    .+.+..+.. .  ..|..+..++.+.+.+   +++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            4579999999999999999999999999999998654322    222112322 1  2344443123333332   3699


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|+++|.
T Consensus        81 ~vih~A~~   88 (341)
T 3enk_A           81 AAIHFAAL   88 (341)
T ss_dssp             EEEECCCC
T ss_pred             EEEECccc
Confidence            99999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.34  E-value=0.00036  Score=54.48  Aligned_cols=75  Identities=11%  Similarity=0.092  Sum_probs=49.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHH-----HHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA-----LKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----i~~~~~--~~~d  151 (269)
                      .+++++|+||+|++|..+++.+.. |.+|+++++++++.+.+. +..-...+..    ++.+.     +.+...  +++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~----D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES----DIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC----CHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec----ccchHHHHHHHHHHHHhcCCCC
Confidence            368899999999999999988866 999999999998888776 4322222221    22111     111111  3799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        78 ~lv~~Ag~   85 (245)
T 3e9n_A           78 TLVHAAAV   85 (245)
T ss_dssp             EEEECC--
T ss_pred             EEEECCCc
Confidence            99999984

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.32  E-value=0.0016  Score=52.62  Aligned_cols=87  Identities=22%  Similarity=0.197  Sum_probs=66.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|.|. |.+|...++.++.+|++|++.+++.++ +.+. ++|+...       ++.+.+.+     .|+|+.+++
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~-------~l~ell~~-----aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKFV-------DLETLLKE-----SDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCcccc-------CHHHHHhh-----CCEEEEecC
Confidence            4789999998 999999999999999999999988766 5555 6776321       23333433     799999987


Q ss_pred             c-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    .+ ...+..|++++.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            4 2    12 356778999999998876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.32  E-value=0.001  Score=55.48  Aligned_cols=80  Identities=14%  Similarity=0.091  Sum_probs=53.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHH---------------HH-HHHHHcCCce---eEecCChhh
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDK---------------VD-LLKNKFGFDE---AFNYKEEAD  137 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~~---------------~~-~~~~~~g~~~---~~~~~~~~~  137 (269)
                      ..++++||+||++|+|++++..+.. .|++|++++++.+.               .. .++ ..|...   ..|..+..+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCCCHHH
Confidence            5688999999999999999998888 99999998865432               12 334 555432   234444312


Q ss_pred             HH---HHHHHHCCCCccEEEeCCCc
Q 024337          138 LN---AALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus       138 ~~---~~i~~~~~~~~d~vid~~g~  159 (269)
                      ..   +.+.+.. |++|++++++|.
T Consensus       124 v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          124 KQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            22   2233322 479999999874

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.32  E-value=0.0013  Score=55.40  Aligned_cols=83  Identities=14%  Similarity=0.062  Sum_probs=53.1

Q ss_pred             cCCCCCEEEEecCcchHHHH--HHHHHHHcCCEEEEEeCCH---------------HHHH-HHHHHcCCce---eEecCC
Q 024337           76 SAKHGECVFISAASGAVGQL--VGQFAKLLGCYVVGSAGSK---------------DKVD-LLKNKFGFDE---AFNYKE  134 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~--~i~~a~~~G~~V~~~~~s~---------------~~~~-~~~~~~g~~~---~~~~~~  134 (269)
                      .+..+++++|+||++|+|++  .+..+...|++|++++++.               +..+ .++ +.|...   ..|..+
T Consensus        56 ~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           56 GFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTTC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCCC
Confidence            35678999999999999999  5555555699999998753               2222 233 555432   235554


Q ss_pred             hhhHHHHHHHHC--CCCccEEEeCCCc
Q 024337          135 EADLNAALKRYF--PEGIDVYFENVGG  159 (269)
Q Consensus       135 ~~~~~~~i~~~~--~~~~d~vid~~g~  159 (269)
                      ..+....+.+..  -+++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            412333333322  1479999999874

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=97.32  E-value=0.00027  Score=54.96  Aligned_cols=98  Identities=7%  Similarity=-0.090  Sum_probs=67.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCCccEE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ..+|.+||-+|.  |+|..+..+++..+.+|++++.+++..+.+++...   ....+-..   +..........+.||.|
T Consensus        58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~---~a~~~~~~~~~~~FD~i  132 (236)
T 3orh_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG---LWEDVAPTLPDGHFDGI  132 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES---CHHHHGGGSCTTCEEEE
T ss_pred             ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEee---hHHhhcccccccCCceE
Confidence            468999999996  56888888888777899999999999998883321   11111111   33333333334479977


Q ss_pred             -EeCCCc-----------hhHhhhHhhhhcCCEEEEEe
Q 024337          154 -FENVGG-----------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       154 -id~~g~-----------~~~~~~~~~l~~~G~~v~~g  179 (269)
                       +|+...           ..+.++.+.|+|||+++.+.
T Consensus       133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence             565532           13577899999999998764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.30  E-value=0.00048  Score=54.93  Aligned_cols=95  Identities=20%  Similarity=0.233  Sum_probs=62.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|+|+||+|.+|..+++.+...  |.+|+++++++++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE----AALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH----HHHHHHHh-CCCEEEEeCC
Confidence            4899999999999999998887  899999999877665554 444432 2344443    22333332 5899999987


Q ss_pred             c------hhHhhhHhhhhc-C-CEEEEEeccc
Q 024337          159 G------KTLDAVLPNMKI-R-GRIAACGMIS  182 (269)
Q Consensus       159 ~------~~~~~~~~~l~~-~-G~~v~~g~~~  182 (269)
                      .      ......++.++. + ++++.++...
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            4      122334444443 3 5888887644

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.30  E-value=0.00038  Score=52.23  Aligned_cols=96  Identities=13%  Similarity=0.079  Sum_probs=64.1

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHcCCceeE---ecCChhhHHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLG----------CYVVGSAGSKDKVDLLKNKFGFDEAF---NYKEEADLNAAL  142 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G----------~~V~~~~~s~~~~~~~~~~~g~~~~~---~~~~~~~~~~~i  142 (269)
                      .++++++||.+|+ |. |..+..+++..|          .+|++++.++..      .......+   |.... +....+
T Consensus        19 ~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~-~~~~~~   89 (196)
T 2nyu_A           19 ILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDP-RTSQRI   89 (196)
T ss_dssp             CCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSH-HHHHHH
T ss_pred             CCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCH-HHHHHH
Confidence            3688999999997 55 899999999876          789999988632      01111122   22222 344444


Q ss_pred             HHHCCC-CccEEEe-----CCCc-------------hhHhhhHhhhhcCCEEEEEec
Q 024337          143 KRYFPE-GIDVYFE-----NVGG-------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       143 ~~~~~~-~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+..++ .||+|+.     +++.             ..+..+.+.|+++|+++....
T Consensus        90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            455544 8999994     3342             246678889999999987643

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=97.30  E-value=0.00041  Score=54.42  Aligned_cols=99  Identities=15%  Similarity=0.079  Sum_probs=69.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~  146 (269)
                      ....+.++.+||-.|+  |.|..+..+++..|.+|++++.+++..+.+++.   .|..   .....+-. +.      ..
T Consensus        30 ~~~~~~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~------~~  100 (256)
T 1nkv_A           30 RVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GY------VA  100 (256)
T ss_dssp             HHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TC------CC
T ss_pred             HhcCCCCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hC------Cc
Confidence            4567889999999996  458889999998899999999999988877633   2432   12222111 11      01


Q ss_pred             CCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++.||+|+.....       ..+..+.+.|+++|+++....
T Consensus       101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  141 (256)
T 1nkv_A          101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP  141 (256)
T ss_dssp             SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred             CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence            2479999863221       457888999999999987643

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.28  E-value=0.0028  Score=51.30  Aligned_cols=96  Identities=11%  Similarity=0.144  Sum_probs=61.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHcC----Cc-eeEecCChhhHHHHHHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS---KDKVDLLKNKFG----FD-EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s---~~~~~~~~~~~g----~~-~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. ..++..+.....+.+.     .
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----~  220 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----S  220 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----H
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----C
Confidence            5789999998 9999999999999999 89999999   666655443443    21 2333333101123333     3


Q ss_pred             ccEEEeCCCchh---Hhh----hHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGGKT---LDA----VLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~~~---~~~----~~~~l~~~G~~v~~g~  180 (269)
                      +|+||+|++...   -..    -...++++..+..+-.
T Consensus       221 ~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  258 (312)
T 3t4e_A          221 ADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVY  258 (312)
T ss_dssp             CSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCC
T ss_pred             ceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEecc
Confidence            899999998421   111    2245666665555533

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.28  E-value=0.00088  Score=54.79  Aligned_cols=78  Identities=21%  Similarity=0.169  Sum_probs=53.5

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-ee---EecCChhhHHHHHHHHCCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-EA---FNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~~---~~~~~~~~~~~~i~~~~~~  148 (269)
                      ..++.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+    +.. ..   .|..+. +   .+.+... 
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~---~~~~~~~-   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ-G---AYDEVIK-   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-T---TTTTTTT-
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh-H---HHHHHHc-
Confidence            345789999999999999999999889999999999887765544221    211 11   233332 1   1222222 


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|+||.+++.
T Consensus        83 ~~d~vih~A~~   93 (342)
T 1y1p_A           83 GAAGVAHIASV   93 (342)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEEeCCC
Confidence            69999999974

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.27  E-value=0.0011  Score=53.47  Aligned_cols=92  Identities=14%  Similarity=0.196  Sum_probs=58.9

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-------HHHHHHHH--HcCCce-eEecCChhhHHHHHHHHCCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-------DKVDLLKN--KFGFDE-AFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-------~~~~~~~~--~~g~~~-~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      +.+|+|+||+|.+|..+++.+...|.+|++++|+.       ++.+.+++  ..+... ..|..+. +   .+.+... +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~-~---~l~~~~~-~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH-E---TLVKAIK-Q   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH-H---HHHHHHT-T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH-H---HHHHHHh-C
Confidence            45799999999999999999988899999999886       54443320  334432 2344443 2   2222222 5


Q ss_pred             ccEEEeCCCc---hhHhhhHhhhhc-C--CEEE
Q 024337          150 IDVYFENVGG---KTLDAVLPNMKI-R--GRIA  176 (269)
Q Consensus       150 ~d~vid~~g~---~~~~~~~~~l~~-~--G~~v  176 (269)
                      +|+||++++.   ......++.++. +  ++++
T Consensus        77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            9999999985   222334444443 2  4666

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.27  E-value=0.00032  Score=54.54  Aligned_cols=73  Identities=14%  Similarity=0.100  Sum_probs=49.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC-CCCccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~~~~d~vid~~g  158 (269)
                      +++++|+||+|++|..+++.+...|++|++++++++    .. ++. ....|..+..++.+.+.+.. .+++|++++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            578999999999999999999889999999998754    11 210 11234444323333333320 126999999987

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.27  E-value=0.00051  Score=56.43  Aligned_cols=102  Identities=20%  Similarity=0.208  Sum_probs=68.1

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcC--------------Cc--eeEecCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFG--------------FD--EAFNYKE  134 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~g--------------~~--~~~~~~~  134 (269)
                      ....+.++++||-.|+ | .|..++.+++..|  .+|++++.+++..+.+++.+.              ..  .++..+-
T Consensus        99 ~~l~~~~g~~VLDiG~-G-~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-G-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HhcCCCCCCEEEEeCC-C-cCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            4457899999999996 4 4888888998876  699999999998888774332              01  1222211


Q ss_pred             hhhHHHHHHHHCCCCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          135 EADLNAALKRYFPEGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       135 ~~~~~~~i~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . +.   ......+.||+|+.....  ..+..+.+.|+++|+++....
T Consensus       177 ~-~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          177 S-GA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             T-CC---C-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             H-Hc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1 11   111122369998876554  568899999999999997644

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=97.27  E-value=0.0023  Score=55.36  Aligned_cols=82  Identities=17%  Similarity=0.229  Sum_probs=55.7

Q ss_pred             CCCC--CEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHcCCce---eEecCChhhHHHHHH
Q 024337           77 AKHG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK-------VDLLKNKFGFDE---AFNYKEEADLNAALK  143 (269)
Q Consensus        77 ~~~~--~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~-------~~~~~~~~g~~~---~~~~~~~~~~~~~i~  143 (269)
                      ++++  .++||+||+|++|..+++.+...|+ +|+.+.++...       .+.++ ..|...   ..|..+..++...+.
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~  312 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLA  312 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHH
Confidence            3455  8999999999999999999988999 88888886321       23333 556532   234454423344444


Q ss_pred             HHCC-CCccEEEeCCCc
Q 024337          144 RYFP-EGIDVYFENVGG  159 (269)
Q Consensus       144 ~~~~-~~~d~vid~~g~  159 (269)
                      +... +++|.+|+++|.
T Consensus       313 ~i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          313 ELPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             TCCTTSCEEEEEECCCC
T ss_pred             HHHHhCCCeEEEECCcc
Confidence            4333 379999999984

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.27  E-value=0.00025  Score=58.11  Aligned_cols=78  Identities=17%  Similarity=0.134  Sum_probs=51.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH---H-HHHHHHc------CCc-e--eEecCChhhHHHHHHHHC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK---V-DLLKNKF------GFD-E--AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~---~-~~~~~~~------g~~-~--~~~~~~~~~~~~~i~~~~  146 (269)
                      +++++|+||+|++|..+++.+...|++|+.+.++.++   . +.++ ..      +.. .  ..|..+..++.+.+.+..
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            5789999999999999999999999988877654332   1 2222 22      121 1  245555423334444433


Q ss_pred             CCCccEEEeCCC
Q 024337          147 PEGIDVYFENVG  158 (269)
Q Consensus       147 ~~~~d~vid~~g  158 (269)
                      .+++|++|+++|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            347999999997

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.25  E-value=0.0023  Score=51.02  Aligned_cols=88  Identities=10%  Similarity=0.012  Sum_probs=61.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.+.+.   .++      +. .+.+ .  .+|+||+|+
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~------~~-~l~~-l--~~DivInaT  186 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VIS------YD-ELSN-L--KGDVIINCT  186 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEE------HH-HHTT-C--CCSEEEECS
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---ccc------HH-HHHh-c--cCCEEEECC
Confidence            5889999998 9999999999999999 99999999988766542332   222      21 1222 2  599999999


Q ss_pred             Cch---h---HhhhHhhhhcCCEEEEEec
Q 024337          158 GGK---T---LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~~---~---~~~~~~~l~~~G~~v~~g~  180 (269)
                      +..   .   .......++++..++.+..
T Consensus       187 p~Gm~~~~~~~pi~~~~l~~~~~v~DlvY  215 (282)
T 3fbt_A          187 PKGMYPKEGESPVDKEVVAKFSSAVDLIY  215 (282)
T ss_dssp             STTSTTSTTCCSSCHHHHTTCSEEEESCC
T ss_pred             ccCccCCCccCCCCHHHcCCCCEEEEEee
Confidence            642   1   1224556777776666544

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.25  E-value=0.0014  Score=53.19  Aligned_cols=92  Identities=13%  Similarity=0.144  Sum_probs=58.8

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHH--HHcCCce-eEecCChhhHHHHHHHHCCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK------DKVDLLK--NKFGFDE-AFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~------~~~~~~~--~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ..+|+|+||+|.+|..+++.+...|.+|++++|+.      ++.+.+.  ...+... ..|..+. +   .+.+... ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~-~---~l~~a~~-~~   78 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH-E---KMVSVLK-QV   78 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCH-H---HHHHHHT-TC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCH-H---HHHHHHc-CC
Confidence            45799999999999999999988999999999875      3333332  0334432 2344443 2   2332222 49


Q ss_pred             cEEEeCCCch---hHhhhHhhhhcC---CEEE
Q 024337          151 DVYFENVGGK---TLDAVLPNMKIR---GRIA  176 (269)
Q Consensus       151 d~vid~~g~~---~~~~~~~~l~~~---G~~v  176 (269)
                      |+||.+++..   .....++.+...   +++|
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           79 DIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            9999999852   233444444443   4776

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.24  E-value=0.0076  Score=43.19  Aligned_cols=95  Identities=8%  Similarity=-0.001  Sum_probs=60.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHc--CCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKF--GFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ..+++|.|+ |.+|...++.+...|.+|++++++ +++.+.+.+.+  |.. ++..+.  .-.+.+++..-.++|.++-+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~--~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS--NDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCT--TSHHHHHHHTTTTCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCC--CCHHHHHHcChhhCCEEEEe
Confidence            467899997 999999999999999999999986 56555554333  332 333222  11233444322379999999


Q ss_pred             CCchhH----hhhHhhhhcCCEEEEE
Q 024337          157 VGGKTL----DAVLPNMKIRGRIAAC  178 (269)
Q Consensus       157 ~g~~~~----~~~~~~l~~~G~~v~~  178 (269)
                      ++....    ....+.+.+..+++..
T Consensus        79 ~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           79 SDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            986322    2333444445566654

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=97.24  E-value=0.0018  Score=51.65  Aligned_cols=100  Identities=11%  Similarity=0.036  Sum_probs=69.2

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ...++.++.+||-.|+  |.|..+..+++..|++|++++.+++..+.+++.+   +...-+..... ++    .+.. +.
T Consensus        58 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~----~~~~-~~  129 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQFD-EP  129 (287)
T ss_dssp             TTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GGCC-CC
T ss_pred             HHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Ch----hhCC-CC
Confidence            4456788999999996  5588889999888999999999999888887433   32111111111 21    1111 57


Q ss_pred             ccEEEeCC-----C--c--hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENV-----G--G--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~-----g--~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+...     +  .  ..+..+.+.|+|+|+++....
T Consensus       130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            99998652     2  1  457788899999999987654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.23  E-value=0.0028  Score=55.03  Aligned_cols=79  Identities=19%  Similarity=0.233  Sum_probs=55.0

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHcCCce---eEecCChhhHHHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK---V----DLLKNKFGFDE---AFNYKEEADLNAALKRY  145 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~---~----~~~~~~~g~~~---~~~~~~~~~~~~~i~~~  145 (269)
                      ++++.++||+||+|++|..+++.+...|+ +|+.+.++...   .    +.++ ..|...   ..|..+...+.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            56789999999999999999999988999 79999987632   1    2233 445432   2355544133333333 


Q ss_pred             CCCCccEEEeCCCc
Q 024337          146 FPEGIDVYFENVGG  159 (269)
Q Consensus       146 ~~~~~d~vid~~g~  159 (269)
                        +++|.||+++|.
T Consensus       334 --~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 --YPPNAVFHTAGI  345 (511)
T ss_dssp             --SCCSEEEECCCC
T ss_pred             --CCCcEEEECCcc
Confidence              579999999983

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.22  E-value=0.00088  Score=55.11  Aligned_cols=95  Identities=25%  Similarity=0.239  Sum_probs=61.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH--HcCCce-eEecCChhhHHHHHHHHCCCCccE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKVDLLKN--KFGFDE-AFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----~~~~~~~~--~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ..+|||+||+|.+|..+++.+...|.+|++++|++    ++.+.+++  ..+... ..|..+..++.+.+++   .++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCE
Confidence            35799999999999999999999999999999876    44443331  334432 2344443233444432   26999


Q ss_pred             EEeCCCch---hHhhhHhhhhcCC---EEEE
Q 024337          153 YFENVGGK---TLDAVLPNMKIRG---RIAA  177 (269)
Q Consensus       153 vid~~g~~---~~~~~~~~l~~~G---~~v~  177 (269)
                      ||.+++..   .....++.++..|   +++.
T Consensus        87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           87 VVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            99999963   2234444444434   5653

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.22  E-value=0.00088  Score=54.87  Aligned_cols=76  Identities=17%  Similarity=0.266  Sum_probs=51.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHcCC--c-e--eEecCChhhHHHHHHHHCCCCccE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV--DLLKNKFGF--D-E--AFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~--~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      +.+|||+||+|.+|..+++.+...|.+|+++++++++.  +.++ .++.  . .  ..|..+..++.+.+...   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            57899999999999999999988999999999876542  2333 4321  1 1  22444431333333332   5899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      ||+++|.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.21  E-value=0.00014  Score=56.56  Aligned_cols=99  Identities=18%  Similarity=0.121  Sum_probs=62.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+.+++|+||+|++|..+++.+...|+  +|+++++++++.+... .-+... ..|..+.    +.+.+... ++|++|+
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCH----HHHHHHhc-CCCEEEE
Confidence            367899999999999999999999999  9999998866433221 112211 2233322    12222222 6999999


Q ss_pred             CCCchh---------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          156 NVGGKT---------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       156 ~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      |+|...               ....++.+.+  .++++.++....
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            998411               1223333433  368998876543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.20  E-value=0.0022  Score=51.76  Aligned_cols=75  Identities=23%  Similarity=0.268  Sum_probs=51.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--HcCCce-eEecCChhhHHHHHHHHCCCCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-----KDKVDLLKN--KFGFDE-AFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-----~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ..+|+|+||+|.+|..+++.+...|.+|++++|+     +++.+.+++  ..+... ..|..+..++.+.+    . ++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~----~-~~d   78 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL----K-QVD   78 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH----T-TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH----h-CCC
Confidence            3579999999999999999999899999999987     444444330  224322 23444431222222    2 599


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      +||.+++.
T Consensus        79 ~vi~~a~~   86 (313)
T 1qyd_A           79 VVISALAG   86 (313)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999984

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=97.19  E-value=0.0013  Score=52.36  Aligned_cols=101  Identities=9%  Similarity=0.078  Sum_probs=70.2

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc----CCceeEecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~----g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      ....+.++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+    |...+ ..... ++.+   ...
T Consensus       104 ~~~~~~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~---~~~  176 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD---FIS  176 (275)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT---CCC
T ss_pred             HHcCCCCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEEC-chhc---cCc
Confidence            4456889999999996  4688888888874  679999999999888887544    43221 11111 2211   111


Q ss_pred             CCCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++.||+|+.....  ..+..+.+.|+++|+++....
T Consensus       177 ~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~  212 (275)
T 1yb2_A          177 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  212 (275)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             CCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2379999986664  678889999999999988654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.18  E-value=0.00055  Score=55.93  Aligned_cols=80  Identities=10%  Similarity=0.145  Sum_probs=50.5

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHcC----Cce-eEecCChhhHHHHHHHHCCC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV--DLLKNKFG----FDE-AFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~--~~~~~~~g----~~~-~~~~~~~~~~~~~i~~~~~~  148 (269)
                      .-+++.+|||+||+|.+|..+++.+...|.+|++++++.++.  ..++ .+.    ... ..|..+..++.+.+...   
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---
Confidence            346789999999999999999999988999999999875531  2222 321    111 22444431233333322   


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|+||.+++.
T Consensus        86 ~~d~Vih~A~~   96 (335)
T 1rpn_A           86 QPQEVYNLAAQ   96 (335)
T ss_dssp             CCSEEEECCSC
T ss_pred             CCCEEEECccc
Confidence            58999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.17  E-value=0.003  Score=54.18  Aligned_cols=94  Identities=15%  Similarity=0.169  Sum_probs=63.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++.+|+|+|+ |++|..++..+... |.+|++++|+.++.+.+.+..+... .+|..+..++.+.+.     ++|+|++|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL   95 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence            3578999998 99999999988877 6799999999888776652334322 234443212333332     58999999


Q ss_pred             CCch-hHhhhHhhhhcCCEEEEE
Q 024337          157 VGGK-TLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       157 ~g~~-~~~~~~~~l~~~G~~v~~  178 (269)
                      ++.. .......+++++-.++..
T Consensus        96 tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             CchhhhHHHHHHHHhcCCEEEEe
Confidence            9963 333344566666666654

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.17  E-value=0.0019  Score=55.22  Aligned_cols=90  Identities=21%  Similarity=0.179  Sum_probs=68.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.+.+|.|.|. |.+|..+++.++.+|++|++++++..+...+. ..|.. +   .   ++.+.++     ..|+|+-+.
T Consensus       255 l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~---~---~l~ell~-----~aDiVi~~~  320 (479)
T 1v8b_A          255 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-V---V---TLDEIVD-----KGDFFITCT  320 (479)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-E---C---CHHHHTT-----TCSEEEECC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-e---c---CHHHHHh-----cCCEEEECC
Confidence            47899999998 99999999999999999999999987654444 55552 1   1   3333332     489999998


Q ss_pred             Cc-hhH-hhhHhhhhcCCEEEEEecc
Q 024337          158 GG-KTL-DAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       158 g~-~~~-~~~~~~l~~~G~~v~~g~~  181 (269)
                      +. ..+ ...+..|+++..++.++..
T Consensus       321 ~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          321 GNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             SSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             ChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            75 333 3677889999999988763

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.17  E-value=0.002  Score=56.26  Aligned_cols=83  Identities=10%  Similarity=0.008  Sum_probs=55.0

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEE-eCCH-------------HH----HHHHHHHcCCce---eEecC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGS-AGSK-------------DK----VDLLKNKFGFDE---AFNYK  133 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~-~~s~-------------~~----~~~~~~~~g~~~---~~~~~  133 (269)
                      .++++.++||+||+|++|..+++.+...|++ ++.+ .++.             ++    .+.++ ..|...   ..|..
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            3678899999999999999999999888996 6666 6662             22    23333 456532   23455


Q ss_pred             ChhhHHHHHHHHCC-CCccEEEeCCCc
Q 024337          134 EEADLNAALKRYFP-EGIDVYFENVGG  159 (269)
Q Consensus       134 ~~~~~~~~i~~~~~-~~~d~vid~~g~  159 (269)
                      +..+....+.+... +++|.+|+++|.
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            54233344444332 379999999984

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.16  E-value=0.0023  Score=55.28  Aligned_cols=82  Identities=15%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHH---H----HHHHHHcCCce---eEecCChhhHHHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK---V----DLLKNKFGFDE---AFNYKEEADLNAALKRY  145 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~---~----~~~~~~~g~~~---~~~~~~~~~~~~~i~~~  145 (269)
                      ++++.++||+||+|++|..+++.+...|+ +|+.++++...   .    +.++ ..|...   ..|..+..++...+.+.
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            56789999999999999999999888899 59999987641   1    2233 455532   23444442333444443


Q ss_pred             CC-CCccEEEeCCCc
Q 024337          146 FP-EGIDVYFENVGG  159 (269)
Q Consensus       146 ~~-~~~d~vid~~g~  159 (269)
                      .. +++|.||+++|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            22 378999999983

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=97.14  E-value=0.0035  Score=46.41  Aligned_cols=102  Identities=17%  Similarity=0.221  Sum_probs=69.2

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ....+.++++||-.|+ | .|..+..+++.. .+|++++.+++..+.+++.   .+...-+..... +..+.+..  .+.
T Consensus        27 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~--~~~  100 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-G-TGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCK--IPD  100 (192)
T ss_dssp             HHHCCCTTCEEEEESC-T-TSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTT--SCC
T ss_pred             HhcCCCCCCEEEEECC-C-CCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhccc--CCC
Confidence            4457889999999997 3 388888888766 8999999999988887743   343111111111 33332221  137


Q ss_pred             ccEEEeCCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+.....    ..+..+.+.|+++|+++....
T Consensus       101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~  135 (192)
T 1l3i_A          101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (192)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence            9999976541    567788889999999987643

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.14  E-value=0.0048  Score=47.33  Aligned_cols=101  Identities=15%  Similarity=0.105  Sum_probs=69.0

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHHc---C-----Cc--eeEecCChhhHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLG------CYVVGSAGSKDKVDLLKNKF---G-----FD--EAFNYKEEADLN  139 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G------~~V~~~~~s~~~~~~~~~~~---g-----~~--~~~~~~~~~~~~  139 (269)
                      .++++++||-.|+  |.|..+..+++..+      .+|++++.+++..+.+++.+   +     ..  .++..+......
T Consensus        77 ~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS--GSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC--TTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC--CCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5789999999997  44889999999876      59999999999888776432   3     11  222222110110


Q ss_pred             HHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          140 AALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       140 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +....  .++||+|+..... ..+..+.+.|+++|+++..-.
T Consensus       155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            00011  2479999987775 667888999999999887644

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.14  E-value=0.0019  Score=55.48  Aligned_cols=90  Identities=16%  Similarity=0.186  Sum_probs=67.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.+.+|.|.|. |.+|..+++.++.+|++|++++++..+..... ..|.. +.      ++.+.++     ..|+|+-++
T Consensus       275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell~-----~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAAD-----KADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEECS
T ss_pred             cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHHh-----cCCEEEECC
Confidence            46899999998 99999999999999999999999887653444 44543 11      3333332     489999998


Q ss_pred             Cc-hhH-hhhHhhhhcCCEEEEEecc
Q 024337          158 GG-KTL-DAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       158 g~-~~~-~~~~~~l~~~G~~v~~g~~  181 (269)
                      +. ..+ ...+..|+++..++.++..
T Consensus       341 ~t~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             SSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             CcccccCHHHHhhCCCCcEEEEcCCC
Confidence            75 333 4677889999999888763

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.14  E-value=0.033  Score=45.65  Aligned_cols=90  Identities=17%  Similarity=0.215  Sum_probs=61.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHH-H-cCCEEEE-EeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAK-L-LGCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~-~-~G~~V~~-~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .-+|.|.|+ |.+|...++.++ . .++++++ .++++++.+.+.+++|...+++     ++.+.+.+   .++|+|+.|
T Consensus         8 ~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-----~~~~~l~~---~~~D~V~i~   78 (346)
T 3cea_A            8 PLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-----NYKDMIDT---ENIDAIFIV   78 (346)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-----CHHHHHTT---SCCSEEEEC
T ss_pred             cceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-----CHHHHhcC---CCCCEEEEe
Confidence            357999998 999998888877 4 3677665 4667777765554778754442     33333321   269999999


Q ss_pred             CCc-hhHhhhHhhhhcCCEEEEEe
Q 024337          157 VGG-KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       157 ~g~-~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ++. .+.+.+..+++.+- -|.+.
T Consensus        79 tp~~~h~~~~~~al~~G~-~v~~e  101 (346)
T 3cea_A           79 APTPFHPEMTIYAMNAGL-NVFCE  101 (346)
T ss_dssp             SCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred             CChHhHHHHHHHHHHCCC-EEEEc
Confidence            997 67777888888754 44443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.12  E-value=0.0068  Score=45.99  Aligned_cols=88  Identities=11%  Similarity=0.068  Sum_probs=58.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-----FDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +|+|+||+|.+|...+..+...|.+|+++++++++.+.+.+.++     .+  +..  . +..+.+.     ++|+|+.|
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~-----~~D~Vi~~   71 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITG--M-KNEDAAE-----ACDIAVLT   71 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEE--E-EHHHHHH-----HCSEEEEC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CCh--h-hHHHHHh-----cCCEEEEe
Confidence            68899977999999999998889999999999888776653444     11  111  1 3444444     38999999


Q ss_pred             CCchhHhhhHhhhh---cCCEEEEEe
Q 024337          157 VGGKTLDAVLPNMK---IRGRIAACG  179 (269)
Q Consensus       157 ~g~~~~~~~~~~l~---~~G~~v~~g  179 (269)
                      ++.......++.+.   ++..++.+.
T Consensus        72 ~~~~~~~~~~~~l~~~~~~~~vi~~~   97 (212)
T 1jay_A           72 IPWEHAIDTARDLKNILREKIVVSPL   97 (212)
T ss_dssp             SCHHHHHHHHHHTHHHHTTSEEEECC
T ss_pred             CChhhHHHHHHHHHHHcCCCEEEEcC
Confidence            99744433333222   344555543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.11  E-value=0.0035  Score=49.94  Aligned_cols=89  Identities=12%  Similarity=0.016  Sum_probs=60.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC---ceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.   ....+..+   .       . ..+|+||
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---l-------~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---L-------K-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---C-------C-SCEEEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---h-------c-CCCCEEE
Confidence            5789999998 9999999999999997 999999999887766546653   12332221   1       1 3699999


Q ss_pred             eCCCchhHh----hhHhhhhcCCEEEEEe
Q 024337          155 ENVGGKTLD----AVLPNMKIRGRIAACG  179 (269)
Q Consensus       155 d~~g~~~~~----~~~~~l~~~G~~v~~g  179 (269)
                      +|++.....    .-...++++..++.+.
T Consensus       193 naTp~gm~~~~~~l~~~~l~~~~~V~Dlv  221 (281)
T 3o8q_A          193 NSTSASLDGELPAIDPVIFSSRSVCYDMM  221 (281)
T ss_dssp             ECSCCCC----CSCCGGGEEEEEEEEESC
T ss_pred             EcCcCCCCCCCCCCCHHHhCcCCEEEEec
Confidence            999852211    1234455655555553

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.11  E-value=0.0019  Score=54.39  Aligned_cols=94  Identities=12%  Similarity=0.097  Sum_probs=65.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHcC------Cc-eeEecCChhhHHHHHHHHCCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLG---CYVVGSAGSKDKVDLLKNKFG------FD-EAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G---~~V~~~~~s~~~~~~~~~~~g------~~-~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .+|+|+|+ |++|..+++.+...|   .+|++.+++.++.+.+.++++      .. ..+|..+..++.+.+.+.   ++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~   77 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KP   77 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CC
Confidence            37899999 999999999988887   499999999998776654543      21 133444431344444432   58


Q ss_pred             cEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          151 DVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       151 d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      |+|++|+|. .....+..+++.+-.++.+
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            999999996 4455556667777777764

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=97.11  E-value=0.0027  Score=48.62  Aligned_cols=102  Identities=14%  Similarity=0.117  Sum_probs=65.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ......++++||-+|+  |.|..++.+++..  +.+|++++.+++..+.+++.   .+...-+..... +..+.+.....
T Consensus        52 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~  128 (221)
T 3u81_A           52 AVIREYSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKK  128 (221)
T ss_dssp             HHHHHHCCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTT
T ss_pred             HHHHhcCCCEEEEECC--CCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHH
Confidence            3445567899999996  6688888888865  67999999999988887742   354321222222 33333333321


Q ss_pred             ----CCccEEEeCCCchh-------HhhhHhhhhcCCEEEEE
Q 024337          148 ----EGIDVYFENVGGKT-------LDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       148 ----~~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~  178 (269)
                          +.||+|+-......       +... +.|+++|.++.-
T Consensus       129 ~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~  169 (221)
T 3u81_A          129 KYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD  169 (221)
T ss_dssp             TSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred             hcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence                47998875544321       2223 789999988764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.11  E-value=0.0021  Score=52.14  Aligned_cols=75  Identities=11%  Similarity=0.167  Sum_probs=49.6

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      -++..+|||+||+|.+|..+++.+...|.+|++++++... +    .++... ..|..+...+.+.+..   +++|+||.
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih   80 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFH   80 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEE
Confidence            4567899999999999999999999999999999987654 1    122221 2344443123333332   25899999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        81 ~A~~   84 (321)
T 2pk3_A           81 LAAK   84 (321)
T ss_dssp             CCSC
T ss_pred             cCcc
Confidence            9984

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.11  E-value=0.0021  Score=51.60  Aligned_cols=74  Identities=16%  Similarity=0.058  Sum_probs=51.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHH--HHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKV--DLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~--~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .++|+|+||+|.+|..+++.+...| .+|++++|++++.  +.+. ..+... ..|..+. +   .+.+... ++|.+|.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~-~---~l~~~~~-~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ-V---IMELALN-GAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCH-H---HHHHHHT-TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCH-H---HHHHHHh-cCCEEEE
Confidence            4789999999999999999888888 8999999987653  2333 345432 2344443 2   2222222 5999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      +++.
T Consensus        79 ~a~~   82 (299)
T 2wm3_A           79 VTNY   82 (299)
T ss_dssp             CCCH
T ss_pred             eCCC
Confidence            9974

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=97.10  E-value=0.0026  Score=51.45  Aligned_cols=95  Identities=12%  Similarity=0.086  Sum_probs=66.0

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +||++|+  |.|..+..+++.+ +.+|++++.+++-.+.+++.++..  .-+..... +..+.+.+..++.||+|+--..
T Consensus        92 rVLdIG~--G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~~  168 (317)
T 3gjy_A           92 RITHLGG--GACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDVF  168 (317)
T ss_dssp             EEEEESC--GGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECCS
T ss_pred             EEEEEEC--CcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECCC
Confidence            8999995  6688888899865 779999999999999998777642  11111111 4444454433458998875321


Q ss_pred             -----------chhHhhhHhhhhcCCEEEEEe
Q 024337          159 -----------GKTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       159 -----------~~~~~~~~~~l~~~G~~v~~g  179 (269)
                                 .+.+..+.+.|+++|.++.-.
T Consensus       169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence                       134678889999999987654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.09  E-value=0.0028  Score=50.98  Aligned_cols=92  Identities=22%  Similarity=0.264  Sum_probs=58.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHH--HcCCce-eEecCChhhHHHHHHHHCCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------KDKVDLLKN--KFGFDE-AFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s------~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ..+|+|+||+|.+|..+++.+...|.+|++++|+      +++.+.+++  ..+... ..|..+..++.+.++     ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CC
Confidence            4679999999999999999999999999999987      333333330  234432 234444313333332     49


Q ss_pred             cEEEeCCCch---hHhhhHhhhhc-C--CEEE
Q 024337          151 DVYFENVGGK---TLDAVLPNMKI-R--GRIA  176 (269)
Q Consensus       151 d~vid~~g~~---~~~~~~~~l~~-~--G~~v  176 (269)
                      |+||.+++..   .....++.++. +  ++++
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9999999852   22333444433 2  4676

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=97.07  E-value=0.0018  Score=49.30  Aligned_cols=95  Identities=15%  Similarity=0.053  Sum_probs=67.8

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccE
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ..+.++.+||-.|+  |.|..+..+++. |.+|++++.+++..+.++ +.+...  .+..+-. ++      ...+.||+
T Consensus        42 ~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~~~~~~d~~-~~------~~~~~~D~  110 (218)
T 3ou2_A           42 RAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNVEFRQQDLF-DW------TPDRQWDA  110 (218)
T ss_dssp             TTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTEEEEECCTT-SC------CCSSCEEE
T ss_pred             hcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCeEEEecccc-cC------CCCCceeE
Confidence            34778899999997  458888888877 889999999999999998 555322  2222111 11      12348999


Q ss_pred             EEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          153 YFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       153 vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+....-         ..+..+.+.|+++|+++....
T Consensus       111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            9875532         246778889999999988765

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=97.07  E-value=0.0017  Score=51.25  Aligned_cols=97  Identities=12%  Similarity=0.185  Sum_probs=66.6

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLL---GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~---G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ++++.+||-+|+  |.|..+..+++..   |++|++++.|++.++.+++.+   +...-+..... +    +.+...+.+
T Consensus        68 ~~~~~~vLDlGc--GtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D----~~~~~~~~~  140 (261)
T 4gek_A           68 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-D----IRDIAIENA  140 (261)
T ss_dssp             CCTTCEEEEETC--TTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-C----TTTCCCCSE
T ss_pred             CCCCCEEEEEeC--CCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-c----ccccccccc
Confidence            789999999997  6688888888864   679999999999988887543   32211111111 1    112222368


Q ss_pred             cEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+|+....-         ..+..+.+.|+|||+++....
T Consensus       141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            988764431         247788999999999998654

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.07  E-value=0.0035  Score=50.84  Aligned_cols=87  Identities=23%  Similarity=0.164  Sum_probs=65.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|+|. |.+|...++.++.+|++|++.+++.++. .+. ++|+..    .   ++.+.+.+     .|+|+.+++
T Consensus       141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~----~---~l~ell~~-----aDvVvl~~P  205 (313)
T 2ekl_A          141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKA----V---SLEELLKN-----SDVISLHVT  205 (313)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCcee----c---CHHHHHhh-----CCEEEEecc
Confidence            5789999998 9999999999999999999999887654 345 677642    1   33333433     799999987


Q ss_pred             c-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    .+ ...+..|++++.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          206 VSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             CChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            4 2    22 456678899888888766

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.06  E-value=0.0024  Score=52.23  Aligned_cols=87  Identities=18%  Similarity=0.228  Sum_probs=65.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+++|.|+|. |.+|...++.++.+|++|++.+++.++ +.+. .+|+..    .   ++.+.+.     ..|+|+.+++
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~P  228 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQ----L---PLEEIWP-----LCDFITVHTP  228 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHGG-----GCSEEEECCC
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----C---CHHHHHh-----cCCEEEEecC
Confidence            5789999998 999999999999999999999987665 3455 677642    1   3333333     3899999987


Q ss_pred             c-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    .+ ...+..|++++.++.++.
T Consensus       229 ~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          229 LLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            4 2    22 357788999998888876

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=97.06  E-value=0.0015  Score=50.40  Aligned_cols=99  Identities=10%  Similarity=-0.004  Sum_probs=69.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ....+.++++||-.|+  |.|..+..+++. +.+|++++.+++..+.+++.+...   .++..+.    .+...  ..+.
T Consensus        64 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~----~~~~~--~~~~  134 (231)
T 1vbf_A           64 DELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDG----TLGYE--EEKP  134 (231)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG----GGCCG--GGCC
T ss_pred             HhcCCCCCCEEEEEcC--CCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc----ccccc--cCCC
Confidence            4456789999999997  348888888876 489999999999998888554321   1222211    11011  1247


Q ss_pred             ccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+....- .....+.+.|+++|+++..-.
T Consensus       135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             EEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             ccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            9999977664 445678899999999987643

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.06  E-value=0.0013  Score=54.20  Aligned_cols=76  Identities=17%  Similarity=0.336  Sum_probs=51.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCce-eEecCChhhHHHHHHHHCCCCccEEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFDE-AFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.++...+.+.+    +... ..|..+...+.+.+...   ++|+||
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi   85 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF   85 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence            578999999999999999999999999999998765443322122    1211 23444431233333322   589999


Q ss_pred             eCCC
Q 024337          155 ENVG  158 (269)
Q Consensus       155 d~~g  158 (269)
                      .++|
T Consensus        86 h~A~   89 (357)
T 1rkx_A           86 HMAA   89 (357)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9998

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=97.06  E-value=0.0031  Score=48.89  Aligned_cols=95  Identities=16%  Similarity=0.064  Sum_probs=65.9

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .++++.+||-+|+  |.|..+..+++. |++|++++.+++..+.++ +. . ..+..    +..+.+.....+.||+|+.
T Consensus        38 ~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~-~-~~~~~----d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK-F-NVVKS----DAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT-S-EEECS----CHHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh-c-ceeec----cHHHHhhhcCCCCeeEEEE
Confidence            4678899999996  557777777765 889999999999999988 43 2 22221    3333332333458999986


Q ss_pred             CCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          156 NVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ...-         ..+..+.+.|+++|+++....
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            4321         346778889999999987543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.05  E-value=0.0063  Score=51.35  Aligned_cols=96  Identities=22%  Similarity=0.285  Sum_probs=68.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE-ecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .+.+|+|.|. |-+|..+++.++..|..|++++.++++.+.++ +.|...++ |..+    .+.+++..-.++|+++-++
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~----~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATR----MDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTC----HHHHHHTTTTTCSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCC----HHHHHhcCCCccCEEEECC
Confidence            3467999998 99999999999999999999999999999998 88875332 3333    2234443223799999999


Q ss_pred             Cch-h---HhhhHhhhhcCCEEEEEec
Q 024337          158 GGK-T---LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~~-~---~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.. .   +....+.+.+.-+++.-..
T Consensus        77 ~~~~~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred             CChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence            962 2   2344455556666765543

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.04  E-value=0.0015  Score=53.10  Aligned_cols=101  Identities=20%  Similarity=0.227  Sum_probs=68.2

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....++++++||-.|+ | .|..+..+++..+  .+|++++.+++..+.+++.+   |... +..... +..+...  ..
T Consensus        69 ~~l~~~~~~~VLDiGc-G-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~-d~~~~~~--~~  142 (317)
T 1dl5_A           69 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCG-DGYYGVP--EF  142 (317)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGGCCG--GG
T ss_pred             HhcCCCCcCEEEEecC-C-chHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEEC-Chhhccc--cC
Confidence            4567889999999997 3 4888888888754  47999999999888877432   4432 111111 1111111  12


Q ss_pred             CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEe
Q 024337          148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       148 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ++||+|+..... .....+.+.|+++|+++..-
T Consensus       143 ~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             CCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            479999987765 34467788999999988763

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=97.04  E-value=0.0033  Score=50.93  Aligned_cols=97  Identities=13%  Similarity=0.113  Sum_probs=68.5

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHCCCCc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ++++++||-.|+  |.|..+..+++..|++|++++.+++..+.+++.   .|..   ..+..+-. ++     ....+.|
T Consensus       115 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-----~~~~~~f  186 (312)
T 3vc1_A          115 AGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DT-----PFDKGAV  186 (312)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CCCTTCE
T ss_pred             CCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cC-----CCCCCCE
Confidence            788999999996  568888899988899999999999988877643   3432   12221111 11     0112489


Q ss_pred             cEEEeCCC------chhHhhhHhhhhcCCEEEEEecc
Q 024337          151 DVYFENVG------GKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       151 d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |+|+....      ...+..+.+.|+++|+++.....
T Consensus       187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~  223 (312)
T 3vc1_A          187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGC  223 (312)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            99986433      25678899999999999987653

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.04  E-value=0.0026  Score=51.51  Aligned_cols=91  Identities=18%  Similarity=0.164  Sum_probs=58.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHH--HHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLK--NKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~--~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      ++|+|+||+|.+|..+++.+...|.+|++++|+.+ +.+.+.  ...+... ..|..+..++.+.+    . ++|+||.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~----~-~~d~vi~~   86 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELM----K-KVDVVISA   86 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHH----T-TCSEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHH----c-CCCEEEEC
Confidence            57999999999999999999999999999998764 333222  0345432 23444431222222    2 59999999


Q ss_pred             CCch---hHhhhHhhhhcC---CEEE
Q 024337          157 VGGK---TLDAVLPNMKIR---GRIA  176 (269)
Q Consensus       157 ~g~~---~~~~~~~~l~~~---G~~v  176 (269)
                      ++..   .....++.++..   ++++
T Consensus        87 a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           87 LAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            9852   233444444432   4666

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.04  E-value=0.0012  Score=54.15  Aligned_cols=73  Identities=16%  Similarity=0.157  Sum_probs=49.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      .+|||+||+|.+|..+++.+...|.+|++++++.++.+.+. ..+... ..|..+.    +.+.+... ++|+||.+++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH----AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH----HHHHHHTT-TCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH----HHHHHHHc-CCCEEEECCcc
Confidence            48999999999999999999999999999998876544333 334332 2243332    23333333 59999999984

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.04  E-value=0.0033  Score=50.76  Aligned_cols=70  Identities=14%  Similarity=0.131  Sum_probs=49.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ..+|||+||+|.+|..+++.+...|.+|+++++++...+ +.   +... ..|.    . .+.+.+... ++|+||.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl----~-~~~~~~~~~-~~d~Vih~a~   71 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDY----T-LEDLINQLN-DVDAVVHLAA   71 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCC----C-HHHHHHHTT-TCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEccc----c-HHHHHHhhc-CCCEEEEccc
Confidence            368999999999999999999999999999999854444 33   3322 2233    3 334444443 6999999998


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus        72 ~   72 (311)
T 3m2p_A           72 T   72 (311)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.03  E-value=0.0012  Score=54.60  Aligned_cols=37  Identities=16%  Similarity=0.161  Sum_probs=33.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKL--LGCYVVGSAGSKD  115 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~--~G~~V~~~~~s~~  115 (269)
                      .+.+|||+||+|.+|..+++.+..  .|.+|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            467999999999999999999988  8999999998654

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=97.03  E-value=0.00049  Score=53.08  Aligned_cols=96  Identities=14%  Similarity=0.115  Sum_probs=66.9

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHc---C-----C--ceeEecCChhhH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLG-------CYVVGSAGSKDKVDLLKNKF---G-----F--DEAFNYKEEADL  138 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-------~~V~~~~~s~~~~~~~~~~~---g-----~--~~~~~~~~~~~~  138 (269)
                      .++++++||-.|+ | .|..+..+++..+       .+|++++.+++..+.+++.+   +     .  -.++..+    .
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d----~  154 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD----G  154 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC----G
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC----c
Confidence            5788999999997 4 4888889998776       49999999999887776432   1     1  1122221    1


Q ss_pred             HHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEe
Q 024337          139 NAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       139 ~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .+.+..  .+.||+|+.+... .....+.+.|+++|+++..-
T Consensus       155 ~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          155 RKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             GGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ccCCCc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            111111  1479999987775 56688899999999988753

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.03  E-value=0.0026  Score=50.24  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=63.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +++++|+|+ |++|.+++..+...|.+|+++.|+.++.+.+. +++.. .....+.            ..+|+||+|++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~l------------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPPK------------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCCS------------SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHHh------------ccCCEEEEcccC
Confidence            889999998 99999999999999999999999999888877 77743 3333221            058999999874


Q ss_pred             h-----hHhh--hHhhhhcCCEEEEEec
Q 024337          160 K-----TLDA--VLPNMKIRGRIAACGM  180 (269)
Q Consensus       160 ~-----~~~~--~~~~l~~~G~~v~~g~  180 (269)
                      .     .+..  ....++++..++.+..
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence            2     1211  1225777777776644

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=97.03  E-value=0.0012  Score=51.07  Aligned_cols=100  Identities=14%  Similarity=0.184  Sum_probs=66.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRY  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~  145 (269)
                      ......++.+||-.|+  |.|..+..+++.. +.+|++++.+++..+.+++.+   +..   .++..+.. +   .+...
T Consensus        65 ~~~~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~---~~~~~  138 (232)
T 3ntv_A           65 QLIRMNNVKNILEIGT--AIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNAL-E---QFENV  138 (232)
T ss_dssp             HHHHHHTCCEEEEECC--SSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGG-G---CHHHH
T ss_pred             HHHhhcCCCEEEEEeC--chhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH-H---HHHhh
Confidence            4455668899999986  6688888888854 679999999999888776433   432   22222221 2   12201


Q ss_pred             CCCCccEEEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337          146 FPEGIDVYFENVGG----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       146 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  178 (269)
                      ..+.||+|+-....    ..++.+.+.|+++|.++.-
T Consensus       139 ~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          139 NDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             TTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            13479988754432    4567888999999998763

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=97.03  E-value=0.0081  Score=47.58  Aligned_cols=90  Identities=10%  Similarity=0.008  Sum_probs=62.8

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      +..+.+++|+|+ |+++.+++..+...|+ +|+++.|+.++.+.+.++++..  ++. .. .    +     ..+|+||+
T Consensus       116 ~~~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~~-~~-~----~-----~~~DivIn  181 (271)
T 1npy_A          116 LNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YIN-SL-E----N-----QQADILVN  181 (271)
T ss_dssp             CCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EES-CC-T----T-----CCCSEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cch-hh-h----c-----ccCCEEEE
Confidence            445788999998 9999999999999998 8999999988876665477652  111 10 1    0     25899999


Q ss_pred             CCCchhH--------hhhHhhhhcCCEEEEEec
Q 024337          156 NVGGKTL--------DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~--------~~~~~~l~~~G~~v~~g~  180 (269)
                      |++....        ......+.++..++.+..
T Consensus       182 aTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          182 VTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             CCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            9985321        112356677776766644

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=97.03  E-value=0.0015  Score=52.18  Aligned_cols=96  Identities=16%  Similarity=0.129  Sum_probs=65.5

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc----CC--------ceeEecCChhhHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKF----GF--------DEAFNYKEEADLNAALK  143 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~----g~--------~~~~~~~~~~~~~~~i~  143 (269)
                      ..++.+||+.|+  |.|..+..++++ +. +|++++.+++..+.+++.+    +.        +.-+..... +..+.+.
T Consensus        73 ~~~~~~VLdiG~--G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~  148 (281)
T 1mjf_A           73 HPKPKRVLVIGG--GDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIK  148 (281)
T ss_dssp             SSCCCEEEEEEC--TTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHH
T ss_pred             CCCCCeEEEEcC--CcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhc
Confidence            346789999996  557788888887 65 9999999999999988666    21        111111111 3334444


Q ss_pred             HHCCCCccEEEeCCC-----------chhHhhhHhhhhcCCEEEEE
Q 024337          144 RYFPEGIDVYFENVG-----------GKTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       144 ~~~~~~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  178 (269)
                      .  ++.||+|+-...           ...+..+.+.|+++|.++..
T Consensus       149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            3  458998875332           13477888999999999875

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=97.01  E-value=0.0027  Score=48.16  Aligned_cols=99  Identities=16%  Similarity=0.199  Sum_probs=65.9

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ....++.+||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   +....+..... +..+.+.. .++ 
T Consensus        52 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~-~~~-  126 (210)
T 3c3p_A           52 ARIKQPQLVVVPGD--GLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-DPLGIAAG-QRD-  126 (210)
T ss_dssp             HHHHCCSEEEEESC--GGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-CHHHHHTT-CCS-
T ss_pred             HHhhCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-cHHHHhcc-CCC-
Confidence            34457789999985  6788888999876  579999999999888776433   33221211111 33332222 234 


Q ss_pred             ccEEEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337          150 IDVYFENVGG----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       150 ~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  178 (269)
                      ||+|+-....    ..++.+.+.|+++|.++.-
T Consensus       127 fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          127 IDILFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence            9988754322    5678889999999988864

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=97.01  E-value=0.00099  Score=51.21  Aligned_cols=97  Identities=19%  Similarity=0.140  Sum_probs=67.3

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---C-----Cc--eeEecCChhhHHHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---G-----FD--EAFNYKEEADLNAALK  143 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g-----~~--~~~~~~~~~~~~~~i~  143 (269)
                      .++++++||-.|+  |.|..+..+++..|  .+|++++.+++..+.+++.+   +     ..  .++..    +..... 
T Consensus        74 ~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~----d~~~~~-  146 (226)
T 1i1n_A           74 QLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG----DGRMGY-  146 (226)
T ss_dssp             TSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES----CGGGCC-
T ss_pred             hCCCCCEEEEEcC--CcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC----CcccCc-
Confidence            3788999999997  45888888998876  59999999999888776432   2     11  12211    111000 


Q ss_pred             HHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          144 RYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       ...+.||+|+..... ..+..+.+.|+++|+++..-.
T Consensus       147 -~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          147 -AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             -GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             -ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence             012379999877765 667888999999999987643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.01  E-value=0.00041  Score=56.70  Aligned_cols=78  Identities=8%  Similarity=-0.015  Sum_probs=50.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++......+.+.+.--.  ..|..+..++.+.+.+.   ++|+||++
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih~   95 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVHS   95 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEEC
Confidence            46789999999999999999998899999999986443211110221111  23444431233334332   59999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        96 A~~   98 (330)
T 2pzm_A           96 AAA   98 (330)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            984

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.01  E-value=0.0072  Score=49.01  Aligned_cols=90  Identities=11%  Similarity=0.061  Sum_probs=62.2

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+|.|+|. |.+|...++.++..|.  +|++.++++++.+.+. +.|.......+.. +.  .+     ...|+||-|+.
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~~~~-~~--~~-----~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIA-KV--ED-----FSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCTT-GG--GG-----GCCSEEEECSC
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcCCHH-HH--hh-----ccCCEEEEeCC
Confidence            68999997 9999999999999999  9999999999999888 7876321111111 10  11     14899999998


Q ss_pred             chh----HhhhHhhhhcCCEEEEEec
Q 024337          159 GKT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      ...    +......++++..++.++.
T Consensus       104 ~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHhhccCCCcEEEECCC
Confidence            633    3334444555665555543

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=97.01  E-value=0.0019  Score=49.70  Aligned_cols=95  Identities=8%  Similarity=0.046  Sum_probs=67.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC-CCCccEEEe
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF-PEGIDVYFE  155 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~~~~d~vid  155 (269)
                      +.++.+||-.|+  |.|..+..+++. |++|++++.++...+.+++....-..+..+-.    +.+. .. .+.||+|+.
T Consensus        46 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~----~~~~-~~~~~~fD~v~~  117 (226)
T 3m33_A           46 LTPQTRVLEAGC--GHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGK----GELP-AGLGAPFGLIVS  117 (226)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSC----SSCC-TTCCCCEEEEEE
T ss_pred             CCCCCeEEEeCC--CCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchh----hccC-CcCCCCEEEEEe
Confidence            578899999996  557788888877 88999999999999998844222222222210    0010 11 347999998


Q ss_pred             CCCc-hhHhhhHhhhhcCCEEEEEe
Q 024337          156 NVGG-KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       156 ~~g~-~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .... ..+..+.+.|+++|+++..+
T Consensus       118 ~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            7554 78899999999999999443

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=97.00  E-value=0.0026  Score=50.16  Aligned_cols=99  Identities=13%  Similarity=0.055  Sum_probs=66.2

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCcc
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ....+.++.+||-+|+  |.|..+..+++. |++|++++.|++..+.+++++... ...+..+. +.  .......+.||
T Consensus        39 ~~l~l~~g~~VLDlGc--GtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD  112 (261)
T 3iv6_A           39 FLENIVPGSTVAVIGA--STRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD  112 (261)
T ss_dssp             HTTTCCTTCEEEEECT--TCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred             HhcCCCCcCEEEEEeC--cchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence            4456789999999997  678888888875 889999999999999998555432 11222211 11  00001124799


Q ss_pred             EEEeCCCc---------hhHhhhHhhhhcCCEEEEE
Q 024337          152 VYFENVGG---------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       152 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~  178 (269)
                      +|+.+..-         ..+....+.+ |+|+++..
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            99875431         2466677788 99998864

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=97.00  E-value=0.0054  Score=46.30  Aligned_cols=94  Identities=13%  Similarity=0.111  Sum_probs=63.7

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---------------c--eeE--ecCCh
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---------------D--EAF--NYKEE  135 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---------------~--~~~--~~~~~  135 (269)
                      ..+.++.+||..|+  |.|..+..+++. |++|++++.|++..+.++++.+.               .  ..+  |..+.
T Consensus        18 l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l   94 (203)
T 1pjz_A           18 LNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   94 (203)
T ss_dssp             HCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             cccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence            45678999999997  567778888876 89999999999999988855432               1  111  22221


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEE
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~  178 (269)
                       .+.+ .     +.||+|++...-         ..++.+.+.|+|+|+++.+
T Consensus        95 -~~~~-~-----~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           95 -TARD-I-----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             -THHH-H-----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             -Cccc-C-----CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence             1111 0     259999974321         1457788999999994444

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=97.00  E-value=0.0049  Score=49.39  Aligned_cols=97  Identities=10%  Similarity=-0.023  Sum_probs=68.3

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHCCCC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      .+.++.+||-+|+  |.|..+..+++..|++|++++.++...+.+++.   .|..   ..+..+-. ++     ...++.
T Consensus        79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~~~~~  150 (297)
T 2o57_A           79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----PCEDNS  150 (297)
T ss_dssp             CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----SSCTTC
T ss_pred             CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cC-----CCCCCC
Confidence            6789999999996  578888889988899999999999988777633   2332   12221111 11     011237


Q ss_pred             ccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+....-       ..+..+.+.|+++|+++....
T Consensus       151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            9999875432       357888999999999988754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.99  E-value=0.0047  Score=50.98  Aligned_cols=96  Identities=14%  Similarity=0.107  Sum_probs=60.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHc-CCce-eEe-cCChhhHHHHHHHHCCCCccEEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV--DLLKNKF-GFDE-AFN-YKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~--~~~~~~~-g~~~-~~~-~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++++.  +.+. .. +... ..| ..+..++.+.++     ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~~-----~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLFE-----GAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHHT-----TCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHHh-----cCCEEE
Confidence            56799999999999999999888999999999887654  3333 22 2221 224 334312222222     589999


Q ss_pred             eCCCch------hHhhhHhhhhc-C--CEEEEEecc
Q 024337          155 ENVGGK------TLDAVLPNMKI-R--GRIAACGMI  181 (269)
Q Consensus       155 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~  181 (269)
                      .+++..      .....++.++. +  +++|.++..
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            777531      11334444433 3  589988764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.98  E-value=0.0022  Score=52.57  Aligned_cols=77  Identities=14%  Similarity=0.160  Sum_probs=50.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHHHcCC--ce-eEecCChhhHHHHHHHHC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----------DKVDLLKNKFGF--DE-AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----------~~~~~~~~~~g~--~~-~~~~~~~~~~~~~i~~~~  146 (269)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.          +..+.+.+..+.  .. ..|..+...+.+.+.+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            46899999999999999999988999999998642          233334311232  21 23444431233333321 


Q ss_pred             CCCccEEEeCCCc
Q 024337          147 PEGIDVYFENVGG  159 (269)
Q Consensus       147 ~~~~d~vid~~g~  159 (269)
                        ++|+||.++|.
T Consensus        81 --~~d~vih~A~~   91 (348)
T 1ek6_A           81 --SFMAVIHFAGL   91 (348)
T ss_dssp             --CEEEEEECCSC
T ss_pred             --CCCEEEECCCC
Confidence              69999999984

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.97  E-value=0.0034  Score=49.69  Aligned_cols=78  Identities=19%  Similarity=0.130  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|.+++|.|+++.+|..+++++...|++|++..+..                    . ++.+.++     ..|++|.++
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t--------------------~-~L~~~~~-----~ADIVI~Av  211 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT--------------------K-DLSLYTR-----QADLIIVAA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHHHHHT-----TCSEEEECS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHHHHhh-----cCCEEEECC
Confidence            4799999999967789999999999999988876321                    1 3333343     389999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccc
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      |...+ ---+.++++..++.+|...
T Consensus       212 g~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          212 GCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             SCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             CCCCc-CCHHHcCCCeEEEEeccCc
Confidence            97433 2335678888888888643

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.97  E-value=0.0012  Score=54.71  Aligned_cols=75  Identities=16%  Similarity=0.088  Sum_probs=51.9

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCce-eEecC-ChhhHHHHHHHHCCCCccEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYK-EEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +.+|||+||+|.+|..+++.+... |.+|++++++.++...+.+.-+... ..|.. +...+.+.++     ++|+||.+
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence            578999999999999999998887 8999999998776554431122222 23444 3312233333     48999998


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      ++.
T Consensus        99 A~~  101 (372)
T 3slg_A           99 VAI  101 (372)
T ss_dssp             BCC
T ss_pred             Ccc
Confidence            873

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.97  E-value=0.0055  Score=50.36  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=50.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHc------CCce-eEecCChhhHHHHHHHHCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD----KVDLLKNKF------GFDE-AFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~----~~~~~~~~~------g~~~-~~~~~~~~~~~~~i~~~~~  147 (269)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++..    +.+.+.+.+      +... ..|..+. +   .+.+...
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~---~~~~~~~  101 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL-D---DCNNACA  101 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH-H---HHHHHHT
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH-H---HHHHHhc
Confidence            3578999999999999999999989999999998642    333332122      1111 2233332 2   2222222


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                       ++|+||.++|.
T Consensus       102 -~~d~vih~A~~  112 (352)
T 1sb8_A          102 -GVDYVLHQAAL  112 (352)
T ss_dssp             -TCSEEEECCSC
T ss_pred             -CCCEEEECCcc
Confidence             69999999984

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.96  E-value=0.0056  Score=50.40  Aligned_cols=88  Identities=23%  Similarity=0.239  Sum_probs=65.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|++|.|+|. |.+|..+++.++.+|++|++.+++. +.+.+. ..|...+    .  ++.+.+.+     .|+|+-++.
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~-~~g~~~~----~--~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGREN-SKERAR-ADGFAVA----E--SKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHH-HHHHHH-HTTCEEC----S--SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCC-CHHHHH-hcCceEe----C--CHHHHHhh-----CCEEEEecc
Confidence            4789999998 9999999999999999999999775 334455 6676421    1  44444544     799999887


Q ss_pred             c-h----h-HhhhHhhhhcCCEEEEEec
Q 024337          159 G-K----T-LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~-~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    . -...+..|+++..+|.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            3 1    1 2356788999999998874

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.96  E-value=0.0023  Score=52.72  Aligned_cols=89  Identities=26%  Similarity=0.266  Sum_probs=67.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|++|.|+|. |.+|..+++.++.+|++|++.+++....+.+. +.|...+    .  ++.+.+.     ..|+|+-+++
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV----E--DLNEMLP-----KCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC----S--CHHHHGG-----GCSEEEECSC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc----C--CHHHHHh-----cCCEEEECCC
Confidence            5789999998 99999999999999999999998866666666 6776422    1  3444443     3799999887


Q ss_pred             c--h---hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G--K---TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~---~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      .  .   .+ ...+..|+++..+|.++.
T Consensus       230 lt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            3  1   22 466788889988888765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.96  E-value=0.00055  Score=54.22  Aligned_cols=95  Identities=11%  Similarity=0.083  Sum_probs=60.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +++|+|+||+|++|..+++.+...|++|+++++++.+..    ..+.. ...|..+. +.   +.+... ++|++|+++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~-~~---~~~~~~-~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADA-NA---VNAMVA-GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCH-HH---HHHHHT-TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCH-HH---HHHHHc-CCCEEEECCC
Confidence            468999999999999999999999999999998865332    11111 12344443 22   222222 5999999998


Q ss_pred             c---hhHh-----------hhHhhhhc--CCEEEEEecccc
Q 024337          159 G---KTLD-----------AVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       159 ~---~~~~-----------~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      .   ..+.           ..++.+++  .+++|.++....
T Consensus        74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~  114 (267)
T 3rft_A           74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT  114 (267)
T ss_dssp             CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred             CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence            4   2111           12223332  368998876543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.95  E-value=0.0043  Score=49.11  Aligned_cols=77  Identities=19%  Similarity=0.206  Sum_probs=57.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|.+++|.|+++-+|..+++++...|++|++..+..                    . ++.+.++     ..|++|.++
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~~~~~-----~ADIVI~Av  212 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------------T-DLKSHTT-----KADILIVAV  212 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-SHHHHHT-----TCSEEEECC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHHHhcc-----cCCEEEECC
Confidence            4789999999966689999999999999987765321                    1 3334443     389999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEecc
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |...+ --.+.++++..++.+|..
T Consensus       213 g~p~~-I~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          213 GKPNF-ITADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             CCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             CCCCC-CCHHHcCCCcEEEEeccc
Confidence            97433 233567888888888764

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.95  E-value=0.0032  Score=51.13  Aligned_cols=98  Identities=15%  Similarity=0.093  Sum_probs=66.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC------ceeEecCChhhHHHHHHHHCCCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~------~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .++.+||++|+  |.|..+..+++..+ .+|++++.+++..+.+++.+..      +.-+..... +..+.+.. .++.|
T Consensus       107 ~~~~~VLdIG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEcC--CcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence            45689999995  66788888888754 6999999999999998865532      111222222 44444443 34489


Q ss_pred             cEEEeCCC-----------chhHhhhHhhhhcCCEEEEEe
Q 024337          151 DVYFENVG-----------GKTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       151 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  179 (269)
                      |+|+....           ...+..+.+.|+++|.++.-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            98885431           245678889999999998753

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.94  E-value=0.0064  Score=49.78  Aligned_cols=87  Identities=17%  Similarity=0.198  Sum_probs=64.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|+|. |.+|...++.++..|.+|++.+++.++ +... .+|...    .   ++.+.+.+     .|+|+.+++
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~~~l~~-----aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAEF----K---PLEDLLRE-----SDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCccc----C---CHHHHHhh-----CCEEEECCC
Confidence            4679999998 999999999999999999999988776 5555 666531    1   33344443     799999998


Q ss_pred             c-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    .+ ...+..|+++..++.++.
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            5 2    12 245677888888887764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.92  E-value=0.007  Score=47.63  Aligned_cols=92  Identities=12%  Similarity=0.025  Sum_probs=65.2

Q ss_pred             CCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHH
Q 024337           61 GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNA  140 (269)
Q Consensus        61 ~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~  140 (269)
                      ||+......++.. .+ -.|.+++|.|+++-+|..+++++...|++|++..+..                    . ++.+
T Consensus       133 PcTp~gv~~lL~~-~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------------~-~L~~  189 (276)
T 3ngx_A          133 PATPRAVIDIMDY-YG-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------------K-DIGS  189 (276)
T ss_dssp             CHHHHHHHHHHHH-HT-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHHH
T ss_pred             CCcHHHHHHHHHH-hC-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------c-cHHH
Confidence            4444444455533 34 6899999999966799999999999999998876321                    1 4455


Q ss_pred             HHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          141 ALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       141 ~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .+++     .|++|.++|...+ ---+.++++..++.++..
T Consensus       190 ~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          190 MTRS-----SKIVVVAVGRPGF-LNREMVTPGSVVIDVGIN  224 (276)
T ss_dssp             HHHH-----SSEEEECSSCTTC-BCGGGCCTTCEEEECCCE
T ss_pred             hhcc-----CCEEEECCCCCcc-ccHhhccCCcEEEEeccC
Confidence            5554     7999999997432 123557888888888764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.92  E-value=0.0059  Score=48.31  Aligned_cols=77  Identities=21%  Similarity=0.161  Sum_probs=57.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|++++|.|.++-+|..+++++...|++|++..+..                    . ++.+.++     ..|++|.++
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T--------------------~-~L~~~~~-----~ADIVI~Av  212 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT--------------------R-DLADHVS-----RADLVVVAA  212 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHHHHHH-----TCSEEEECC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC--------------------c-CHHHHhc-----cCCEEEECC
Confidence            4799999999967799999999999999998875321                    1 3344444     389999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEecc
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |...+ --.+.++++..++.+|..
T Consensus       213 g~p~~-I~~~~vk~GavVIDvgi~  235 (286)
T 4a5o_A          213 GKPGL-VKGEWIKEGAIVIDVGIN  235 (286)
T ss_dssp             CCTTC-BCGGGSCTTCEEEECCSC
T ss_pred             CCCCC-CCHHHcCCCeEEEEeccc
Confidence            97433 233567888899998874

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.91  E-value=0.002  Score=53.46  Aligned_cols=89  Identities=15%  Similarity=0.095  Sum_probs=66.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .+.+|.|+|. |.+|...++.++.+|++ |++.+++....+.+. ++|+..+    .  ++.+.+.     ..|+|+.++
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV----E--NIEELVA-----QADIVTVNA  229 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC----S--SHHHHHH-----TCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec----C--CHHHHHh-----cCCEEEECC
Confidence            5789999998 99999999999999996 999998776566665 6775321    1  3444443     379999998


Q ss_pred             Cc-----hhH-hhhHhhhhcCCEEEEEec
Q 024337          158 GG-----KTL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~-----~~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      +.     ..+ ...+..|++++.+|.++.
T Consensus       230 P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            75     122 346678888888888765

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.90  E-value=0.0028  Score=49.07  Aligned_cols=101  Identities=7%  Similarity=-0.090  Sum_probs=65.1

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+++.+||-+|+  |.|..+..+++....+|++++.+++..+.+++.... ..-+..... +..+......++.||+|+.
T Consensus        58 ~~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~fD~V~~  134 (236)
T 1zx0_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  134 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             CCCCCeEEEEec--cCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEec-CHHHhhcccCCCceEEEEE
Confidence            468899999996  567777777654444999999999999888844321 111111111 3333222223348999987


Q ss_pred             -CCC----ch-------hHhhhHhhhhcCCEEEEEec
Q 024337          156 -NVG----GK-------TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 -~~g----~~-------~~~~~~~~l~~~G~~v~~g~  180 (269)
                       +.+    ..       .+..+.+.|+++|+++.+..
T Consensus       135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  171 (236)
T 1zx0_A          135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL  171 (236)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred             CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence             332    11       26788999999999987643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.90  E-value=0.0057  Score=56.10  Aligned_cols=82  Identities=18%  Similarity=0.211  Sum_probs=57.0

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHH-HcCC-EEEEEeCCHH---H----HHHHHHHcCCce---eEecCChhhHHHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAK-LLGC-YVVGSAGSKD---K----VDLLKNKFGFDE---AFNYKEEADLNAALKR  144 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~-~~G~-~V~~~~~s~~---~----~~~~~~~~g~~~---~~~~~~~~~~~~~i~~  144 (269)
                      +.++.+++|.|++|++|.++++.+. ..|+ +|+.++++..   +    .+.++ ..|...   ..|..+..+....+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            4678999999999999999999886 7899 6999998832   2    23333 456532   2455554234444444


Q ss_pred             HCCC-CccEEEeCCCc
Q 024337          145 YFPE-GIDVYFENVGG  159 (269)
Q Consensus       145 ~~~~-~~d~vid~~g~  159 (269)
                      .... ++|.+|+++|.
T Consensus       606 ~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHHhCCCEEEEECCCc
Confidence            4333 79999999984

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.90  E-value=0.007  Score=48.27  Aligned_cols=80  Identities=15%  Similarity=0.119  Sum_probs=57.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|.+++|.|+++-+|..+++++...|++|++..+.....+                   +.+.++     .+|++|.++
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l~~~~~-----~ADIVI~Av  218 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------MIDYLR-----TADIVIAAM  218 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------HHHHHH-----TCSEEEECS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------hhhhhc-----cCCEEEECC
Confidence            47999999999666899999999999999988774222111                   002333     379999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEeccc
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      |...+ ---+.++++..++.++...
T Consensus       219 g~p~~-I~~~~vk~GavVIDvgi~~  242 (300)
T 4a26_A          219 GQPGY-VKGEWIKEGAAVVDVGTTP  242 (300)
T ss_dssp             CCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             CCCCC-CcHHhcCCCcEEEEEeccC
Confidence            97433 1235578888999888643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.89  E-value=0.0019  Score=53.55  Aligned_cols=75  Identities=13%  Similarity=0.175  Sum_probs=45.3

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHc-------CCc-e--eEecCChhhHHHHHHHHCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV--DLLKNKF-------GFD-E--AFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~--~~~~~~~-------g~~-~--~~~~~~~~~~~~~i~~~~~~  148 (269)
                      .+|||+||+|.+|..+++.+...|.+|++++++.++.  +.+. .+       +.. .  ..|..+..++.+.+...   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD-HIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHH-HHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            5799999999999999999988999999999876532  2222 21       111 1  12444431233333322   


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|+||+++|.
T Consensus        78 ~~d~vih~A~~   88 (372)
T 1db3_A           78 QPDEVYNLGAM   88 (372)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            58999999873

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.89  E-value=0.00069  Score=55.46  Aligned_cols=77  Identities=19%  Similarity=0.204  Sum_probs=49.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHc-CCc-eeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKF-GFD-EAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.... +.+. .+ +.. ...|..+...+.+.++.   +++|+||+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIADHALVNQLIGD---LQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCCHHHHHHHHhc---cCCcEEEE
Confidence            457899999999999999999988999999999864321 1111 11 111 12344443122333332   25999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        96 ~A~~   99 (333)
T 2q1w_A           96 TAAS   99 (333)
T ss_dssp             CCCC
T ss_pred             Ccee
Confidence            9984

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.88  E-value=0.0025  Score=48.86  Aligned_cols=75  Identities=15%  Similarity=0.160  Sum_probs=52.4

Q ss_pred             CCCEEEEecC----------------cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHH
Q 024337           79 HGECVFISAA----------------SGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAAL  142 (269)
Q Consensus        79 ~~~~vlI~ga----------------~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i  142 (269)
                      .|.++||+||                +|++|.++++.+...|++|+.+.+... .+.   ..|. .+++..+..++.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~---~~g~-~~~dv~~~~~~~~~v   81 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT---PPFV-KRVDVMTALEMEAAV   81 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC---CTTE-EEEECCSHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc---CCCC-eEEccCcHHHHHHHH
Confidence            4789999999                589999999999999999999876431 110   1122 355655532445555


Q ss_pred             HHHCCCCccEEEeCCCc
Q 024337          143 KRYFPEGIDVYFENVGG  159 (269)
Q Consensus       143 ~~~~~~~~d~vid~~g~  159 (269)
                      .+.. +++|+++.++|-
T Consensus        82 ~~~~-~~~Dili~~Aav   97 (226)
T 1u7z_A           82 NASV-QQQNIFIGCAAV   97 (226)
T ss_dssp             HHHG-GGCSEEEECCBC
T ss_pred             HHhc-CCCCEEEECCcc
Confidence            4433 369999999985

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.88  E-value=0.0061  Score=52.07  Aligned_cols=93  Identities=12%  Similarity=0.132  Sum_probs=60.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee--EecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +.+|+|+| +|++|..++..+...|.+|++.+++.++.+.+.+.++....  +|..+..++.+.+    . ++|+|++|+
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l----~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV----A-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHH----T-TSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHH----c-CCcEEEECC
Confidence            56899998 59999999999988999999999998877655424432112  2433321222222    2 599999999


Q ss_pred             Cc-hhHhhhHhhhhcCCEEEEE
Q 024337          158 GG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       158 g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      +. ........++.++..++..
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEES
T ss_pred             ccccchHHHHHHHhCCCeEEEe
Confidence            86 2333344556666566543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.88  E-value=0.0021  Score=51.95  Aligned_cols=69  Identities=16%  Similarity=0.205  Sum_probs=40.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.++    . .   ....|..+...+.+.+...   ++|+||+++|.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~---~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K---FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C---eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence            5689999999999999999999899999999976543    1 1   1112222221223333322   58999999974

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=96.87  E-value=0.0083  Score=50.24  Aligned_cols=97  Identities=13%  Similarity=0.154  Sum_probs=66.5

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCccEE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ++++++||=.|+  ++|..++.+++. |++|++++.++...+.+++++   |....+.  .. +..+.+... .+.||+|
T Consensus       212 ~~~g~~VLDlg~--GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~--~~-D~~~~l~~~-~~~fD~I  284 (393)
T 4dmg_A          212 VRPGERVLDVYS--YVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIR--HG-EALPTLRGL-EGPFHHV  284 (393)
T ss_dssp             CCTTCEEEEESC--TTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEE--ES-CHHHHHHTC-CCCEEEE
T ss_pred             hcCCCeEEEccc--chhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEE--Ec-cHHHHHHHh-cCCCCEE
Confidence            456999998886  567777777774 888999999999988877543   4432222  11 444444433 2359988


Q ss_pred             EeCCCc----------------hhHhhhHhhhhcCCEEEEEec
Q 024337          154 FENVGG----------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       154 id~~g~----------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +-..+.                ..+..+.+.|+++|.++.+..
T Consensus       285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~  327 (393)
T 4dmg_A          285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC  327 (393)
T ss_dssp             EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence            864332                346778899999999987755

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.87  E-value=0.0053  Score=48.13  Aligned_cols=98  Identities=15%  Similarity=0.079  Sum_probs=63.7

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-------------------eeEecCChhh
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-------------------EAFNYKEEAD  137 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-------------------~~~~~~~~~~  137 (269)
                      ..++.+||..|+  |.|..+..+++. |++|++++.|+...+.++++.+..                   .-+..... +
T Consensus        66 ~~~~~~vLD~GC--G~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-D  141 (252)
T 2gb4_A           66 GQSGLRVFFPLC--GKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC-S  141 (252)
T ss_dssp             TCCSCEEEETTC--TTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES-C
T ss_pred             CCCCCeEEEeCC--CCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC-c
Confidence            467899999997  567888888775 999999999999999887455320                   00111111 1


Q ss_pred             HHHHHHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEe
Q 024337          138 LNAALKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       138 ~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +.+ +.....+.||+|++...-         ..+..+.+.|+|+|+++.+.
T Consensus       142 ~~~-l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          142 IFD-LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             TTT-GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccc-CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence            111 111111479999975421         24667888999999986543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.86  E-value=0.012  Score=45.84  Aligned_cols=77  Identities=16%  Similarity=0.154  Sum_probs=54.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +|+|.|++|.+|...++.+... +.+++++....+..+.+. ..+++.++|.+.+....+.+......+.++|+.++|.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            6899999999999999998766 888887765544444444 3467778888876334444444333478899988884

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.86  E-value=0.0033  Score=49.18  Aligned_cols=98  Identities=11%  Similarity=0.103  Sum_probs=68.3

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ..+.++.+||-.|+  |.|..+..+++..+.+|++++.++...+.+++.   .|...   .+..+-. ++.     ...+
T Consensus        42 ~~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~-----~~~~  113 (257)
T 3f4k_A           42 NELTDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD-NLP-----FQNE  113 (257)
T ss_dssp             CCCCTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCS-----SCTT
T ss_pred             hcCCCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh-hCC-----CCCC
Confidence            46788999999996  568999999999888999999999988877633   23321   2221111 110     1124


Q ss_pred             CccEEEeCCC-----c-hhHhhhHhhhhcCCEEEEEec
Q 024337          149 GIDVYFENVG-----G-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vid~~g-----~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .||+|+....     . ..+..+.+.|+|+|+++....
T Consensus       114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            7999975432     1 467888999999999988753

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=96.86  E-value=0.00087  Score=52.31  Aligned_cols=104  Identities=11%  Similarity=0.015  Sum_probs=65.8

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH--
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY--  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~--  145 (269)
                      ......++++||-.|+  |.|..++.+++..  +.+|++++.+++..+.+++   ..|...-+..... +..+.+...  
T Consensus        54 ~l~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~~~~  130 (242)
T 3r3h_A           54 MLIRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG-PALDTLHSLLN  130 (242)
T ss_dssp             HHHHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHhh
Confidence            3445567889999985  5678888888876  5799999988775443332   4455321111111 222323222  


Q ss_pred             --CCCCccEEEeCCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          146 --FPEGIDVYFENVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       146 --~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                        ..+.||+|+-....    ..++.+.+.|+++|.++.-.
T Consensus       131 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          131 EGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             HHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence              12479988754443    34778899999999988743

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.85  E-value=0.028  Score=44.73  Aligned_cols=40  Identities=20%  Similarity=0.228  Sum_probs=36.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      ++|.|.|+ |.+|...++.+...|.+|++.++++++.+.+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAK   44 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            58999998 99999999999999999999999999877766

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.85  E-value=0.0044  Score=47.65  Aligned_cols=98  Identities=14%  Similarity=0.208  Sum_probs=65.6

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-eeEecCChhhHHHHHHHHCCCCc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ..++++++||-.|+ |..|..+..+++..+.+|++++.+++..+.+++++   +.. .++..+.. .    +....++.|
T Consensus        51 ~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~----~~~~~~~~f  124 (230)
T 3evz_A           51 TFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-I----IKGVVEGTF  124 (230)
T ss_dssp             TTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-S----STTTCCSCE
T ss_pred             hhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-h----hhhcccCce
Confidence            44688999999997 43677888888777889999999999888776432   331 23322210 0    111122479


Q ss_pred             cEEEeCCC--------------------------chhHhhhHhhhhcCCEEEEE
Q 024337          151 DVYFENVG--------------------------GKTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       151 d~vid~~g--------------------------~~~~~~~~~~l~~~G~~v~~  178 (269)
                      |+|+....                          ...+..+.+.|+++|+++.+
T Consensus       125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            99986422                          13467788889999988875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.85  E-value=0.0083  Score=47.65  Aligned_cols=91  Identities=10%  Similarity=0.192  Sum_probs=63.3

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++++.+.+. ..+... +..+-. ++.       -.++|+||.+++..
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~-~~~D~~-d~~-------~~~~d~vi~~a~~~   74 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEP-LLWPGE-EPS-------LDGVTHLLISTAPD   74 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEE-EESSSS-CCC-------CTTCCEEEECCCCB
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeE-EEeccc-ccc-------cCCCCEEEECCCcc
Confidence            68999998 99999999999999999999999998887776 555432 222221 211       23699999999741


Q ss_pred             -----hHhhhHhhhhc----CCEEEEEeccc
Q 024337          161 -----TLDAVLPNMKI----RGRIAACGMIS  182 (269)
Q Consensus       161 -----~~~~~~~~l~~----~G~~v~~g~~~  182 (269)
                           .....++.++.    -.++|.++...
T Consensus        75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  105 (286)
T 3ius_A           75 SGGDPVLAALGDQIAARAAQFRWVGYLSTTA  105 (286)
T ss_dssp             TTBCHHHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred             ccccHHHHHHHHHHHhhcCCceEEEEeecce
Confidence                 22334444433    26888877543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.84  E-value=0.00071  Score=54.68  Aligned_cols=96  Identities=14%  Similarity=0.063  Sum_probs=62.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHcCC--cee--Ee-cCChhhHHHHHHHHCCCCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD-LLKNKFGF--DEA--FN-YKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~-~~~~~~g~--~~~--~~-~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      .+.+++|.|++.-+|..+++++...|++|+++.++..+.. ... .++.  +..  +. .+.. ++.+.+++     +|+
T Consensus       176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~-~la~~~~~~t~~~~t~~~-~L~e~l~~-----ADI  248 (320)
T 1edz_A          176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLNKHHVEDLGEYSED-LLKKCSLD-----SDV  248 (320)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCCCCEEEEEEECCHH-HHHHHHHH-----CSE
T ss_pred             CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH-HHhhhcccccccccccHh-HHHHHhcc-----CCE
Confidence            6899999999446799999999999999998887633221 111 3332  111  10 1112 56666665     899


Q ss_pred             EEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          153 YFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       153 vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ||.++|...+-.--+.++++..++.++..
T Consensus       249 VIsAtg~p~~vI~~e~vk~GavVIDVgi~  277 (320)
T 1edz_A          249 VITGVPSENYKFPTEYIKEGAVCINFACT  277 (320)
T ss_dssp             EEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             EEECCCCCcceeCHHHcCCCeEEEEcCCC
Confidence            99999974332223447787777777763

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.84  E-value=0.065  Score=43.59  Aligned_cols=88  Identities=10%  Similarity=0.110  Sum_probs=57.0

Q ss_pred             EEEEecCcchHHHHH-HHHHHHcCCEEEE-EeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           82 CVFISAASGAVGQLV-GQFAKLLGCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~-i~~a~~~G~~V~~-~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +|.|.|+ |.+|... +..++..+.++++ .++++++.+.+.+++|....+  .   ++.+.+.+   ..+|+|+.|++.
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~---~~~~~l~~---~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T---SVEELVGD---PDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S---CHHHHHTC---TTCCEEEECSCG
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C---CHHHHhcC---CCCCEEEEeCCh
Confidence            5889998 9999876 5444447888775 456777766655477764332  1   33333321   269999999997


Q ss_pred             -hhHhhhHhhhhcCCEEEEEe
Q 024337          160 -KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       160 -~~~~~~~~~l~~~G~~v~~g  179 (269)
                       .+...+..+++.+- -+.+.
T Consensus        73 ~~h~~~~~~al~~Gk-~v~~e   92 (332)
T 2glx_A           73 ELHREQTLAAIRAGK-HVLCE   92 (332)
T ss_dssp             GGHHHHHHHHHHTTC-EEEEC
T ss_pred             hHhHHHHHHHHHCCC-eEEEe
Confidence             66677777777754 44443

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=96.84  E-value=0.0064  Score=47.91  Aligned_cols=97  Identities=14%  Similarity=0.130  Sum_probs=67.3

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCCCC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      .+.++.+||-.|+  |.|..+..+++..+++|++++.++...+.+++.+   |..   ..+..+-. ++    . ...+.
T Consensus        43 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~----~-~~~~~  114 (267)
T 3kkz_A           43 NLTEKSLIADIGC--GTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD-DL----P-FRNEE  114 (267)
T ss_dssp             CCCTTCEEEEETC--TTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC----C-CCTTC
T ss_pred             cCCCCCEEEEeCC--CCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh-hC----C-CCCCC
Confidence            4788999999996  5688899999886669999999999888776432   332   12221111 11    0 11247


Q ss_pred             ccEEEeCCCc------hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+....-      ..+..+.+.|+++|+++....
T Consensus       115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            9999865432      457888899999999987654

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.84  E-value=0.0099  Score=47.69  Aligned_cols=86  Identities=14%  Similarity=0.062  Sum_probs=61.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  159 (269)
                      .+|.|+|+ |.+|...+..+...|.+|++.++++++.+.+. +.|...   ..   +..+.+.     .+|+||.|++. 
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~-----~~D~vi~~v~~~   72 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAE-----QCDVIITMLPNS   72 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHH-----HCSEEEECCSSH
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHh-----CCCEEEEECCCH
Confidence            37999997 99999999999888999999999999888877 556431   11   3333343     27999999984 


Q ss_pred             hhHhhhH-------hhhhcCCEEEEEe
Q 024337          160 KTLDAVL-------PNMKIRGRIAACG  179 (269)
Q Consensus       160 ~~~~~~~-------~~l~~~G~~v~~g  179 (269)
                      ..+...+       ..++++..++.++
T Consensus        73 ~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           73 PHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            4444333       4556666666654

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.84  E-value=0.0058  Score=49.73  Aligned_cols=88  Identities=10%  Similarity=0.064  Sum_probs=64.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .+.+|.|+|. |.+|...++.++.+|++|++.++ +.++ ..+. ++|+..    .+  ++.+.+.+     .|+|+-++
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~----~~--~l~ell~~-----aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF----HD--SLDSLLSV-----SQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE----CS--SHHHHHHH-----CSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE----cC--CHHHHHhh-----CCEEEEec
Confidence            5789999998 99999999999999999999998 7665 3454 667632    11  33344443     79999998


Q ss_pred             Cc-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          158 GG-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      .. .    .+ ...+..|+++..++.++.
T Consensus       211 p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          211 PSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            74 2    22 345678888888888765

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.83  E-value=0.0031  Score=52.66  Aligned_cols=89  Identities=16%  Similarity=0.012  Sum_probs=65.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|+|. |.+|..+++.++.+|++|++.+++..+.+... .+|+...   .   ++.+.+.     ..|+|+.++.
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~---~---~l~ell~-----~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH---A---TREDMYP-----VCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC---S---SHHHHGG-----GCSEEEECSC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec---C---CHHHHHh-----cCCEEEEecC
Confidence            5789999998 99999999999999999999998765555555 6776421   1   3333333     3799998887


Q ss_pred             c-----hhH-hhhHhhhhcCCEEEEEec
Q 024337          159 G-----KTL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-----~~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      .     ..+ ...+..|+++..+|.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            3     123 356677888888887765

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.83  E-value=0.002  Score=52.73  Aligned_cols=99  Identities=17%  Similarity=0.122  Sum_probs=66.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC-----C-ceeEecCChhhHHHHHHHHCCCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFG-----F-DEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g-----~-~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ..++.+||.+|+  |.|..+..++++.+ .+|++++.+++..+.+++.+.     . +.-+..... +..+.+.....+.
T Consensus       118 ~~~~~~VLdIG~--G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTTC
T ss_pred             CCCCCEEEEECC--CccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-CHHHHHHhccCCC
Confidence            456789999996  56788888888764 599999999999888875442     1 111111112 4444444333347


Q ss_pred             ccEEEeCCC-----------chhHhhhHhhhhcCCEEEEE
Q 024337          150 IDVYFENVG-----------GKTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       150 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  178 (269)
                      ||+|+....           ...+..+.+.|+++|.++.-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            998885322           13567888999999999875

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.83  E-value=0.01  Score=47.45  Aligned_cols=86  Identities=15%  Similarity=0.140  Sum_probs=60.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  159 (269)
                      .+|.|+|. |.+|...++.+...|.+|++.++++++.+.+. +.|....   .   +..+.+.+     .|+||-|++. 
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~---~~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAERA---A---TPCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEEC---S---SHHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCeec---C---CHHHHHhc-----CCEEEEEcCCH
Confidence            47899998 99999999999999999999999999988887 6665311   1   33444443     6888888884 


Q ss_pred             hhHhhhH-------hhhhcCCEEEEEe
Q 024337          160 KTLDAVL-------PNMKIRGRIAACG  179 (269)
Q Consensus       160 ~~~~~~~-------~~l~~~G~~v~~g  179 (269)
                      ..+...+       ..++++..++.++
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            3333333       4455555565553

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.83  E-value=0.0023  Score=51.68  Aligned_cols=101  Identities=16%  Similarity=0.056  Sum_probs=66.3

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC-----C-ceeEecCChhhHHHHHHHHCCCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFG-----F-DEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g-----~-~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ..++.+||+.|+  |.|..+..+++..+ .+|++++.+++..+.+++.+.     . +.-+..... +..+.+....++.
T Consensus        93 ~~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~~~~~~~~~  169 (304)
T 3bwc_A           93 HPKPERVLIIGG--GDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG-DGLAFVRQTPDNT  169 (304)
T ss_dssp             SSSCCEEEEEEC--TTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHSSCTTC
T ss_pred             CCCCCeEEEEcC--CCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-cHHHHHHhccCCc
Confidence            356789999996  56778888887654 599999999998888875441     0 101111111 3333333223348


Q ss_pred             ccEEEeCCC-----------chhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVG-----------GKTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+....           ...+..+.+.|+++|.++....
T Consensus       170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~  211 (304)
T 3bwc_A          170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE  211 (304)
T ss_dssp             EEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             eeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            998875432           1457788899999999987643

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.83  E-value=0.021  Score=47.83  Aligned_cols=111  Identities=18%  Similarity=0.148  Sum_probs=73.2

Q ss_pred             cchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------HcCC--ce-
Q 024337           63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKN----------KFGF--DE-  128 (269)
Q Consensus        63 ~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~----------~~g~--~~-  128 (269)
                      .....+..+....+++++++|+=+|+  |+|..++++++..|+ +|++++.+++..+.+++          .+|.  .. 
T Consensus       157 t~~~~i~~il~~l~l~~gd~VLDLGC--GtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV  234 (438)
T 3uwp_A          157 TSFDLVAQMIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY  234 (438)
T ss_dssp             THHHHHHHHHHHHCCCTTCEEEEESC--TTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred             CCHHHHHHHHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence            33444445556678999999999995  779999999998898 59999999876555542          2343  22 


Q ss_pred             -eEecCCh-hhHHHHHHHHCCCCccEEEeCCC---c---hhHhhhHhhhhcCCEEEEEec
Q 024337          129 -AFNYKEE-ADLNAALKRYFPEGIDVYFENVG---G---KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       129 -~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       ++..+-. ..+...+.     .+|+|+-..-   .   ..+.+.++.|++||++|....
T Consensus       235 efi~GD~~~lp~~d~~~-----~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          235 TLERGDFLSEEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             EEEECCTTSHHHHHHHH-----TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             EEEECcccCCccccccC-----CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence             2222211 02222111     4899885321   1   456778899999999998754

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.82  E-value=0.0084  Score=47.69  Aligned_cols=90  Identities=11%  Similarity=0.086  Sum_probs=61.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+|.|+|+ |.+|...++.++..|.  +|++.++++++.+.++ +.|...... .   +..+.+.    ...|+|+.|++
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~-~---~~~~~~~----~~aDvVilavp   71 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGT-T---SIAKVED----FSPDFVMLSSP   71 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEE-S---CGGGGGG----TCCSEEEECSC
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCccccc-C---CHHHHhc----CCCCEEEEcCC
Confidence            36899997 9999999999999898  9999999999888887 777642111 1   1111121    04899999998


Q ss_pred             chh----HhhhHhhhhcCCEEEEEec
Q 024337          159 GKT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      ...    +......++++..++.++.
T Consensus        72 ~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            633    3333344556665555443

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.81  E-value=0.0053  Score=50.23  Aligned_cols=75  Identities=17%  Similarity=0.266  Sum_probs=48.7

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--H---HHHHHHHHcC-Cce-eEecCChhhHHHHHHHHCCCCccEE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--D---KVDLLKNKFG-FDE-AFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~--~---~~~~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      .+|||+||+|.+|..+++.+...|.+|++++++.  .   ..+.+. ..+ ... ..|..+..++.+.++.   .++|+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~v   77 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITK---YMPDSC   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhc---cCCCEE
Confidence            4799999999999999999998999999998632  1   122232 222 221 2344443123333332   159999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |.+++.
T Consensus        78 ih~A~~   83 (347)
T 1orr_A           78 FHLAGQ   83 (347)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.81  E-value=0.0029  Score=51.68  Aligned_cols=88  Identities=9%  Similarity=0.049  Sum_probs=65.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|.+|.|.|. |.+|..+++.++.+|++|++.+++..+.+... .+|...    .   ++.+.+.+     .|+|+-++.
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQ----V---ACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCcee----C---CHHHHHhh-----CCEEEEcCC
Confidence            4789999998 99999999999999999999998865555555 566521    1   33444443     799998887


Q ss_pred             c--h---hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G--K---TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~---~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      .  .   .+ ...+..|+++..+|.++.
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            3  1   22 366778888888888865

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.80  E-value=0.0031  Score=49.84  Aligned_cols=100  Identities=15%  Similarity=0.214  Sum_probs=68.8

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~  146 (269)
                      ....+.++.+||-.|+  |.|..+..+++..+.+|++++.+++..+.+++.+   +..   ..+..+-. ++     ...
T Consensus        55 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~~  126 (273)
T 3bus_A           55 ALLDVRSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-----PFE  126 (273)
T ss_dssp             HHSCCCTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CSC
T ss_pred             HhcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-----CCC
Confidence            4456789999999996  5588888999888999999999999887776432   332   12222111 10     011


Q ss_pred             CCCccEEEeCCC-----c--hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVG-----G--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++.||+|+....     .  ..+..+.+.|+++|+++....
T Consensus       127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            237999975332     1  457888899999999987654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.80  E-value=0.0059  Score=63.12  Aligned_cols=82  Identities=12%  Similarity=0.058  Sum_probs=58.2

Q ss_pred             CCCCEEEEecCcch-HHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHcCC---ce---eEecCChhhHHHHHHHH
Q 024337           78 KHGECVFISAASGA-VGQLVGQFAKLLGCYVVGSAGSKDK-----VDLLKNKFGF---DE---AFNYKEEADLNAALKRY  145 (269)
Q Consensus        78 ~~~~~vlI~ga~g~-vG~~~i~~a~~~G~~V~~~~~s~~~-----~~~~~~~~g~---~~---~~~~~~~~~~~~~i~~~  145 (269)
                      -.+++++|+||++| +|.++++.+...|++|++++++.++     .+.+.++++.   ..   ..|..+..+....+.+.
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999 9999999999999999999987665     3433334432   11   24555542344444444


Q ss_pred             CC------CCccEEEeCCCc
Q 024337          146 FP------EGIDVYFENVGG  159 (269)
Q Consensus       146 ~~------~~~d~vid~~g~  159 (269)
                      ..      |++|++++++|.
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCC
T ss_pred             HhhhhhhcCCCCEEEECCCc
Confidence            43      479999999984

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.80  E-value=0.0025  Score=52.31  Aligned_cols=70  Identities=17%  Similarity=0.195  Sum_probs=47.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      .++++|||+||+|.+|..+++.+...|.+|+++++++++       .+... ..|..+...+.+.+.     ++|+||.+
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~   84 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-----GVSAVLHL   84 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-----TCSEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-----CCCEEEEC
Confidence            456789999999999999999999999999999987654       12222 234444312222222     69999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      ++.
T Consensus        85 A~~   87 (347)
T 4id9_A           85 GAF   87 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            874

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.79  E-value=0.0059  Score=47.89  Aligned_cols=99  Identities=16%  Similarity=0.207  Sum_probs=67.3

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc--eeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD--EAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~--~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ......++.+||-+|+  |.|..+..+++.. .+|++++.+++..+.+++.+   +..  ..+..+-. ++     ...+
T Consensus        31 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l-----~~~~  101 (260)
T 1vl5_A           31 QIAALKGNEEVLDVAT--GGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PFTD  101 (260)
T ss_dssp             HHHTCCSCCEEEEETC--TTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CSCT
T ss_pred             HHhCCCCCCEEEEEeC--CCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hC-----CCCC
Confidence            4456788999999997  4677787777764 59999999999888876432   322  12211111 11     0112


Q ss_pred             CCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.||+|+....-       ..+..+.+.|+|+|+++....
T Consensus       102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~  141 (260)
T 1vl5_A          102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  141 (260)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence            479999976542       457888999999999988644

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.79  E-value=0.0028  Score=48.88  Aligned_cols=99  Identities=13%  Similarity=0.078  Sum_probs=66.3

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC-ce--eEecCChhhHHHHHHHHCCCCc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGF-DE--AFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~-~~--~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ..++++++||-.|+  |.|..+..+++..| .+|++++.+++..+.+++.... ..  .+..+.. +... ... ..+.|
T Consensus        70 ~~~~~~~~VLDlGc--G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~-~~~~-~~~-~~~~~  144 (230)
T 1fbn_A           70 MPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KPQE-YAN-IVEKV  144 (230)
T ss_dssp             CCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CGGG-GTT-TSCCE
T ss_pred             cCCCCCCEEEEEcc--cCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCC-Cccc-ccc-cCccE
Confidence            45678999999997  34888889998876 5999999999988887744322 11  1111111 1000 001 12479


Q ss_pred             cEEEeCCCc-----hhHhhhHhhhhcCCEEEEE
Q 024337          151 DVYFENVGG-----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       151 d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  178 (269)
                      |+|+.....     ..+..+.+.|+++|+++..
T Consensus       145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            999865543     2378888999999999886

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.79  E-value=0.006  Score=49.89  Aligned_cols=88  Identities=14%  Similarity=0.077  Sum_probs=63.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|+|. |.+|...++.++..|.+|++.+++.++.+.+. ++|....       ++.+.+.+     .|+|+.+++
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~~-----aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAAQ-----SDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHhh-----CCEEEEeCC
Confidence            4679999998 99999999999999999999998776555555 5565321       22333333     799999987


Q ss_pred             c-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          159 G-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    .+ ...+..|+++..++.++.
T Consensus       220 ~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            4 1    22 345677888887777654

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=96.77  E-value=0.0047  Score=48.34  Aligned_cols=96  Identities=13%  Similarity=0.053  Sum_probs=65.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHHHHHH-HCCCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKR-YFPEGI  150 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~i~~-~~~~~~  150 (269)
                      .++.+||=.|+  |.|..++.+++.. +.+|++++.+++..+.+++   .+|...  ++..    +..+.... ...+.|
T Consensus        79 ~~~~~vLDiG~--G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~----d~~~~~~~~~~~~~f  152 (249)
T 3g89_A           79 QGPLRVLDLGT--GAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG----RAEVLAREAGHREAY  152 (249)
T ss_dssp             CSSCEEEEETC--TTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC----CHHHHTTSTTTTTCE
T ss_pred             CCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC----cHHHhhcccccCCCc
Confidence            56889999985  5677778888775 5699999999998887764   345532  2222    22221111 112479


Q ss_pred             cEEEeCCCc---hhHhhhHhhhhcCCEEEEEe
Q 024337          151 DVYFENVGG---KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       151 d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  179 (269)
                      |+|+...-.   ..+..+.+.|+++|+++.+-
T Consensus       153 D~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          153 ARAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             EEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             eEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            999875432   56778889999999998764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.76  E-value=0.0019  Score=53.85  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=50.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      ...+|||+||+|.+|..+++.+...|.+|++++++..+..... ..+... ..|..+..++.+.+     .++|+||.++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~-----~~~d~Vih~A  101 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVT-----EGVDHVFNLA  101 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHh-----CCCCEEEECc
Confidence            3568999999999999999999889999999998765432221 122221 23444331222222     2699999998


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      +.
T Consensus       102 ~~  103 (379)
T 2c5a_A          102 AD  103 (379)
T ss_dssp             CC
T ss_pred             ee
Confidence            83

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.76  E-value=0.025  Score=43.08  Aligned_cols=75  Identities=11%  Similarity=-0.048  Sum_probs=55.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+..+.. ++..+.  ...+.+++..-.++|+++-+++..
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~--~~~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDG--SHKEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCT--TSHHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCC--CCHHHHHhcCcccCCEEEEecCCc
Confidence            5889998 99999999999999999999999999988766356654 333332  122334444323799999999974

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=96.75  E-value=0.00096  Score=54.61  Aligned_cols=36  Identities=8%  Similarity=0.037  Sum_probs=31.3

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      ++++++|+|+++  |+|.++++.+...|++|+++++++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            367899999865  999999999999999999888665

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.75  E-value=0.0084  Score=47.47  Aligned_cols=77  Identities=18%  Similarity=0.193  Sum_probs=58.4

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.+.+++|.|++.-+|.-+++++...|++|++..+..                    . ++.+.+++     .|++|.++
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~~~~~~-----ADIVI~Av  210 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-NLRHHVEN-----ADLLIVAV  210 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-CHHHHHHH-----CSEEEECS
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHHHHhcc-----CCEEEECC
Confidence            4789999999966789999999999999998875322                    1 45555554     79999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEecc
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |...+ .--+.++++..++.+|..
T Consensus       211 g~p~l-I~~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          211 GKPGF-IPGDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             CCTTC-BCTTTSCTTCEEEECCCE
T ss_pred             CCcCc-CCHHHcCCCcEEEEccCC
Confidence            97433 223447888899988874

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.75  E-value=0.12  Score=42.50  Aligned_cols=89  Identities=6%  Similarity=-0.053  Sum_probs=61.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHc--CCEEEEE-eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~-~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -+|.|+|+ |.+|...+..++..  +++++++ ++++++.+.+.+++|. ..+  .   ++.+.+.+   ..+|+|+-|+
T Consensus        14 ~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~---~~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--A---SLTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--S---CHHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--C---CHHHHhcC---CCCCEEEECC
Confidence            57999998 99998888877766  6787744 5677776666557886 333  1   44444443   2599999999


Q ss_pred             Cc-hhHhhhHhhhhcCCEEEEEec
Q 024337          158 GG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .. .+.+.+..++..+-. +.+..
T Consensus        84 p~~~h~~~~~~al~~gk~-v~~EK  106 (354)
T 3q2i_A           84 PSGLHPTQSIECSEAGFH-VMTEK  106 (354)
T ss_dssp             CGGGHHHHHHHHHHTTCE-EEECS
T ss_pred             CcHHHHHHHHHHHHCCCC-EEEeC
Confidence            97 667777777877654 44433

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.74  E-value=0.007  Score=50.58  Aligned_cols=36  Identities=14%  Similarity=0.001  Sum_probs=31.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHH-HcCCEEEEEeCCHH
Q 024337           80 GECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKD  115 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~-~~G~~V~~~~~s~~  115 (269)
                      +.+|||+||+|.+|..+++.+. ..|.+|++++++..
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            3589999999999999999888 89999999997644

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.73  E-value=0.14  Score=41.53  Aligned_cols=88  Identities=11%  Similarity=0.121  Sum_probs=60.8

Q ss_pred             CEEEEecCcchHHHHHHHHHHHc-CCEEEE-EeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL-GCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~-~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      -+|.|.|. |.+|...+..++.. ++++++ .++++++.+.+.+.+|..    +.   ++.+.+.+   ..+|+|+.|++
T Consensus         4 ~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~---~~~~~l~~---~~~D~V~i~tp   72 (331)
T 4hkt_A            4 VRFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VR---TIDAIEAA---ADIDAVVICTP   72 (331)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----EC---CHHHHHHC---TTCCEEEECSC
T ss_pred             eEEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cC---CHHHHhcC---CCCCEEEEeCC
Confidence            36899998 99999888877765 778775 556777766655477764    22   44444432   26999999999


Q ss_pred             c-hhHhhhHhhhhcCCEEEEEec
Q 024337          159 G-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .+...+..+++.+-. |.+..
T Consensus        73 ~~~h~~~~~~al~~gk~-v~~EK   94 (331)
T 4hkt_A           73 TDTHADLIERFARAGKA-IFCEK   94 (331)
T ss_dssp             GGGHHHHHHHHHHTTCE-EEECS
T ss_pred             chhHHHHHHHHHHcCCc-EEEec
Confidence            7 677777777777644 44433

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.73  E-value=0.011  Score=46.34  Aligned_cols=86  Identities=10%  Similarity=0.108  Sum_probs=62.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      .+|.|+|+ |.+|...+..+...|.+|.+.++++++.+.+.+++|...   +.   +..+.+.     .+|+|+.|+...
T Consensus         4 m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~---~~~~~~~-----~~D~Vi~~v~~~   71 (259)
T 2ahr_A            4 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AM---SHQDLID-----QVDLVILGIKPQ   71 (259)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CS---SHHHHHH-----TCSEEEECSCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eC---CHHHHHh-----cCCEEEEEeCcH
Confidence            47999997 999999998888888899999999988877764567542   11   3333333     389999999876


Q ss_pred             hHhhhHhhhhcCCEEEEE
Q 024337          161 TLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~~  178 (269)
                      .....+..++++..++..
T Consensus        72 ~~~~v~~~l~~~~~vv~~   89 (259)
T 2ahr_A           72 LFETVLKPLHFKQPIISM   89 (259)
T ss_dssp             GHHHHHTTSCCCSCEEEC
T ss_pred             hHHHHHHHhccCCEEEEe
Confidence            666666666655555544

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.73  E-value=0.0084  Score=47.81  Aligned_cols=77  Identities=14%  Similarity=0.162  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.+.+++|.|++..+|.-+++++...|++|++..+..                    . ++.+.++     .+|++|.++
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~~~~~-----~ADIVI~Av  216 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------------A-HLDEEVN-----KGDILVVAT  216 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-SHHHHHT-----TCSEEEECC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------------c-cHHHHhc-----cCCEEEECC
Confidence            4789999999965789999999999999988775221                    1 4444444     389999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEecc
Q 024337          158 GGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |...+ ---+.++++..++.++..
T Consensus       217 g~p~~-I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          217 GQPEM-VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             CCTTC-BCGGGSCTTCEEEECCCB
T ss_pred             CCccc-CCHHHcCCCcEEEEccCC
Confidence            97433 333457889999998874

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.73  E-value=0.0057  Score=50.38  Aligned_cols=90  Identities=21%  Similarity=0.209  Sum_probs=65.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~-~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      -.+.+|.|+|. |.+|...++.++ .+|.+|++.+++.++.+... ++|...+    .  ++.+.+.+     .|+|+.+
T Consensus       161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-ALGAERV----D--SLEELARR-----SDCVSVS  227 (348)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-hcCcEEe----C--CHHHHhcc-----CCEEEEe
Confidence            35789999998 999999999999 99999999998876666555 6665421    1  33344443     7999999


Q ss_pred             CCc-h----hH-hhhHhhhhcCCEEEEEec
Q 024337          157 VGG-K----TL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       157 ~g~-~----~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      +.. .    .+ ...+..|+++..++.++.
T Consensus       228 vp~~~~t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence            874 2    12 245667888777777654

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=96.73  E-value=0.0054  Score=46.42  Aligned_cols=95  Identities=14%  Similarity=0.091  Sum_probs=67.1

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      ..+.++.+||-.|+  |.|..+..+++. |.+|++++.+++..+.+++.++.... ..+-. ++    .  ..+.||+|+
T Consensus        39 ~~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~d~~-~~----~--~~~~fD~v~  107 (211)
T 3e23_A           39 GELPAGAKILELGC--GAGYQAEAMLAA-GFDVDATDGSPELAAEASRRLGRPVR-TMLFH-QL----D--AIDAYDAVW  107 (211)
T ss_dssp             TTSCTTCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCE-ECCGG-GC----C--CCSCEEEEE
T ss_pred             HhcCCCCcEEEECC--CCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcCCceE-Eeeec-cC----C--CCCcEEEEE
Confidence            45778999999996  567777777776 88999999999999998855554322 11111 11    1  234899998


Q ss_pred             eCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          155 ENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       155 d~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ....-         ..+..+.+.|+++|+++....
T Consensus       108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  142 (211)
T 3e23_A          108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYK  142 (211)
T ss_dssp             ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence            75432         346788889999999987643

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.72  E-value=0.0069  Score=49.55  Aligned_cols=86  Identities=14%  Similarity=0.178  Sum_probs=61.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|.|. |.+|...++.++..|.+|++.+++.++ +... ++|...    .   ++.+.+.+     .|+|+.+++
T Consensus       145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~e~l~~-----aDiVil~vp  209 (333)
T 2d0i_A          145 YGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELKARY----M---DIDELLEK-----SDIVILALP  209 (333)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHTEEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----c---CHHHHHhh-----CCEEEEcCC
Confidence            5779999998 999999999999999999999988776 5554 556421    1   23333433     799998887


Q ss_pred             ch-----hHh-hhHhhhhcCCEEEEEec
Q 024337          159 GK-----TLD-AVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~~-----~~~-~~~~~l~~~G~~v~~g~  180 (269)
                      ..     .+. ..+..|+++ .++.++.
T Consensus       210 ~~~~t~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          210 LTRDTYHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             CCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred             CChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence            52     222 346677777 6666653

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.72  E-value=0.002  Score=50.54  Aligned_cols=88  Identities=14%  Similarity=0.092  Sum_probs=58.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      ++ +++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++   .....   +..+.+.     .+|+||+|+
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~---~~~~~---~~~~~~~-----~aDiVInat  174 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK---IFSLD---QLDEVVK-----KAKSLFNTT  174 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE---EEEGG---GHHHHHH-----TCSEEEECS
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc---cCCHH---HHHhhhc-----CCCEEEECC
Confidence            45 8999998 9999999999999999 99999999887665542332   12222   3333333     489999999


Q ss_pred             Cchh----HhhhHhhhhcCCEEEEEe
Q 024337          158 GGKT----LDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       158 g~~~----~~~~~~~l~~~G~~v~~g  179 (269)
                      +...    .......++++..++.+.
T Consensus       175 p~gm~p~~~~i~~~~l~~~~~V~Div  200 (253)
T 3u62_A          175 SVGMKGEELPVSDDSLKNLSLVYDVI  200 (253)
T ss_dssp             STTTTSCCCSCCHHHHTTCSEEEECS
T ss_pred             CCCCCCCCCCCCHHHhCcCCEEEEee
Confidence            6311    111234566666666553

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=96.71  E-value=0.0039  Score=49.81  Aligned_cols=99  Identities=17%  Similarity=0.161  Sum_probs=65.7

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCC------ceeEecCChhhHHHHHHHHCCCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~------~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ..++++||+.|+  |.|..+..+++.. +.+|++++.+++..+.+++.+..      +.-+..... +..+.+... ++.
T Consensus        76 ~~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~~-~~~  151 (283)
T 2i7c_A           76 SKEPKNVLVVGG--GDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLENV-TNT  151 (283)
T ss_dssp             SSSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHHC-CSC
T ss_pred             CCCCCeEEEEeC--CcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC-ChHHHHHhC-CCC
Confidence            346789999996  5677777888775 45999999999999998865542      111111111 333334332 458


Q ss_pred             ccEEEeCC----C-------chhHhhhHhhhhcCCEEEEEe
Q 024337          150 IDVYFENV----G-------GKTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       150 ~d~vid~~----g-------~~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ||+|+.-.    +       ...++.+.+.|+++|.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            99887522    1       134677888999999998763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.71  E-value=0.0068  Score=50.75  Aligned_cols=39  Identities=15%  Similarity=0.087  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      -..+.+|||+||+|-+|..++..+...|.+|+++++...
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            356889999999999999999999889999999987643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.71  E-value=0.0032  Score=50.24  Aligned_cols=65  Identities=14%  Similarity=0.158  Sum_probs=45.8

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      -++..+|||+||+|.+|..+++.+...|.+|++++++.               .|..+...+.+.+++.   ++|+||++
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~   70 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINC   70 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence            35678999999999999999999998999999998751               1333321333333322   58999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        71 A~~   73 (292)
T 1vl0_A           71 AAH   73 (292)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            874

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.71  E-value=0.0016  Score=53.34  Aligned_cols=73  Identities=18%  Similarity=0.106  Sum_probs=48.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhh-HHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEAD-LNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|||+||+|.+|..+++.+... |.+|++++++.++.+.+.+..+... ..|..+..+ +.+.+.     ++|+||.+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEccc
Confidence            6999999999999999999887 8999999998765443220112211 123332102 222332     4899999987


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus        77 ~   77 (345)
T 2bll_A           77 I   77 (345)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.71  E-value=0.0039  Score=49.58  Aligned_cols=94  Identities=13%  Similarity=0.063  Sum_probs=65.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHc-----CC-c---eeEecCChhhHHHHHHHHCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKF-----GF-D---EAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~-----g~-~---~~~~~~~~~~~~~~i~~~~~  147 (269)
                      .++.+||+.|+  |.|..+..++++.+ .+|++++.+++-.+.+++.+     +. +   .++..    +..+.+.+ .+
T Consensus        74 ~~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~----D~~~~l~~-~~  146 (275)
T 1iy9_A           74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SE  146 (275)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHHHHT-CC
T ss_pred             CCCCEEEEECC--chHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC----cHHHHHhh-CC
Confidence            35689999996  56777888888766 59999999999988888554     22 1   22322    22233332 23


Q ss_pred             CCccEEEeCCC-----------chhHhhhHhhhhcCCEEEEE
Q 024337          148 EGIDVYFENVG-----------GKTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       148 ~~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  178 (269)
                      +.||+|+....           .+.+..+.+.|+++|.++.-
T Consensus       147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~  188 (275)
T 1iy9_A          147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (275)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            47998876432           14578889999999999875

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.69  E-value=0.0051  Score=50.21  Aligned_cols=75  Identities=20%  Similarity=0.239  Sum_probs=48.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HcCC---c-ee--EecCChhhHHHHHHHHCCCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN--KFGF---D-EA--FNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~--~~g~---~-~~--~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ++++|||+||+|.+|..+++.+...|.+|+++.++.++.+.+.+  .+..   . ..  .|..+..++.+.+.     ++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~   78 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-----GC   78 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----TC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----CC
Confidence            46789999999999999999998899999999887663322210  2211   0 11  24333212333332     58


Q ss_pred             cEEEeCCC
Q 024337          151 DVYFENVG  158 (269)
Q Consensus       151 d~vid~~g  158 (269)
                      |+||.+++
T Consensus        79 d~Vih~A~   86 (337)
T 2c29_D           79 TGVFHVAT   86 (337)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEecc
Confidence            99999886

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=96.69  E-value=0.0092  Score=48.41  Aligned_cols=100  Identities=18%  Similarity=0.175  Sum_probs=66.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRY  145 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~  145 (269)
                      ....++++++||-.|+  |.|..+..+++.+  +.+|++++.++.+.+.+++++   |...  ++..+.. ++.    . 
T Consensus       112 ~~l~~~~g~~VLDlg~--G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~-~~~----~-  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAA--APGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSL-HIG----E-  183 (315)
T ss_dssp             HHHCCCTTCEEEECCS--SCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGG-GGG----G-
T ss_pred             HHhCCCCCCEEEEeCC--CCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChh-hcc----c-
Confidence            3456889999999886  4577777888876  369999999999888776433   5532  2222211 111    1 


Q ss_pred             CCCCccEEEe---CCCc--------------------------hhHhhhHhhhhcCCEEEEEec
Q 024337          146 FPEGIDVYFE---NVGG--------------------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       146 ~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..+.||.|+-   |.|.                          ..+..+.+.|+++|+++....
T Consensus       184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc  247 (315)
T 1ixk_A          184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC  247 (315)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence            1347998875   4331                          345678889999999987543

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=96.69  E-value=0.0074  Score=45.90  Aligned_cols=97  Identities=18%  Similarity=0.107  Sum_probs=66.5

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-CceeEecCChhhHHHHHHHHCCCCcc
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ......++.+||-.|+  |.|..+..+++. |.++++++.+++..+.+++.+. --..+..+-. ++.      ..+.||
T Consensus        39 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~-~~~------~~~~fD  108 (220)
T 3hnr_A           39 EDVVNKSFGNVLEFGV--GTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFL-SFE------VPTSID  108 (220)
T ss_dssp             HHHHHTCCSEEEEECC--TTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSS-SCC------CCSCCS
T ss_pred             HHhhccCCCeEEEeCC--CCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChh-hcC------CCCCeE
Confidence            4444568899999996  557777777776 8899999999999999885544 1112211111 110      114799


Q ss_pred             EEEeCCCc-------h--hHhhhHhhhhcCCEEEEEe
Q 024337          152 VYFENVGG-------K--TLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       152 ~vid~~g~-------~--~~~~~~~~l~~~G~~v~~g  179 (269)
                      +|+....-       .  .+..+.+.|+++|.++...
T Consensus       109 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          109 TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            99875432       1  5778889999999998864

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.68  E-value=0.02  Score=47.10  Aligned_cols=48  Identities=21%  Similarity=0.320  Sum_probs=40.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      -+|++|.|.|. |.+|+.+++.++.+|++|++.+.+.++.+..+ ++++.
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~-~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHT  220 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-hcCCE
Confidence            47899999997 99999999999999999998887776655555 67753

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.68  E-value=0.0036  Score=49.81  Aligned_cols=89  Identities=16%  Similarity=0.112  Sum_probs=60.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++.+++|+|+ |++|.+++..+...|++|++..++.++.+.+.+.+|.. +.+     ++.+.+.     .+|+|+.|++
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~-----~~~~~~~-----~aDiVi~atp  195 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN-----SPEEVID-----KVQVIVNTTS  195 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS-----CGGGTGG-----GCSEEEECSS
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh-----hHHhhhc-----CCCEEEEeCC
Confidence            4689999998 99999999999989999999999988876665355532 211     1111121     4899999998


Q ss_pred             chhHh---h--hHhhhhcCCEEEEEe
Q 024337          159 GKTLD---A--VLPNMKIRGRIAACG  179 (269)
Q Consensus       159 ~~~~~---~--~~~~l~~~G~~v~~g  179 (269)
                      .....   .  ....++++..++.+.
T Consensus       196 ~~~~~~~~~~i~~~~l~~g~~viDv~  221 (275)
T 2hk9_A          196 VGLKDEDPEIFNYDLIKKDHVVVDII  221 (275)
T ss_dssp             TTSSTTCCCSSCGGGCCTTSEEEESS
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            63211   1  134566666666553

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.67  E-value=0.015  Score=47.35  Aligned_cols=89  Identities=12%  Similarity=0.083  Sum_probs=61.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ...+|.|+|. |.+|...++.+...|.+|++.++++++.+.+. +.|+...   .   +..+.+.     ..|+||-|++
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~-~~g~~~~---~---~~~e~~~-----~aDvVi~~vp   96 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA-ALGATIH---E---QARAAAR-----DADIVVSMLE   96 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-TTTCEEE---S---SHHHHHT-----TCSEEEECCS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-HCCCEee---C---CHHHHHh-----cCCEEEEECC
Confidence            3468999998 99999999999999999999999999988887 5565321   1   3333332     3788888887


Q ss_pred             c-hhHhhh------HhhhhcCCEEEEEec
Q 024337          159 G-KTLDAV------LPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~~~~~~------~~~l~~~G~~v~~g~  180 (269)
                      . ..+...      ...++++..++.++.
T Consensus        97 ~~~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           97 NGAVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             SHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             CHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            4 333333      334555666665544

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.67  E-value=0.0051  Score=50.84  Aligned_cols=105  Identities=18%  Similarity=0.146  Sum_probs=67.9

Q ss_pred             chhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC----HHH---------HHHHHHHcCCcee
Q 024337           64 GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS----KDK---------VDLLKNKFGFDEA  129 (269)
Q Consensus        64 ~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s----~~~---------~~~~~~~~g~~~~  129 (269)
                      .+..+.++.....--++.+|+|.|| |..|..+++++..+|+ +|++++++    .++         ..+++ +.+.   
T Consensus       176 lAal~~A~~i~g~~l~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~-~~~~---  250 (388)
T 1vl6_A          176 SAAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIAR-ITNP---  250 (388)
T ss_dssp             HHHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHH-TSCT---
T ss_pred             HHHHHHHHHHhCCCCCCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHH-hhhc---
Confidence            3444444422222236789999999 9999999999999999 89999987    443         23333 3221   


Q ss_pred             EecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          130 FNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       130 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .... ++.+.++     ++|++|-+++. -.-++.++.|+++..++.+..
T Consensus       251 ~-~~~~-~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN  295 (388)
T 1vl6_A          251 E-RLSG-DLETALE-----GADFFIGVSRGNILKPEWIKKMSRKPVIFALAN  295 (388)
T ss_dssp             T-CCCS-CHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred             c-Cchh-hHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence            0 1122 5666664     37999999885 333567777887776655544

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=96.66  E-value=0.00091  Score=54.17  Aligned_cols=36  Identities=14%  Similarity=0.119  Sum_probs=33.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            579999999999999999999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	269
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	1e-34
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	2e-31
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	3e-20
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	2e-16
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-16
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	2e-16
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	5e-16
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-14
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	6e-14
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	9e-14
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	2e-13
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	7e-13
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	9e-13
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-12
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	1e-11
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	6e-11
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	4e-10
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-07
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	2e-06
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-06
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	6e-05
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	0.003

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  121 bits (304), Expect = 1e-34
 Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 6/186 (3%)

Query: 53  LSYYTGILGMPGMTAYVGFYEVCSAKHG--ECVFISAASGAVGQLVGQFAKLLGCYVVGS 110
           LSY+ G +GMPG+T+ +G  E      G  + + +S A+GA G L GQ   LLGC  V  
Sbjct: 2   LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61

Query: 111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMK 170
                +  L        +A    +  ++   L+   P G+DVYF+NVGG   + V+  M 
Sbjct: 62  ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 171 IRGRIAACGMISQYNLD----KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIP 226
               I  CG ISQYN D     P           + +  E F VL++   +   +  +  
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181

Query: 227 HIKEGK 232
             KEGK
Sbjct: 182 WFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  112 bits (280), Expect = 2e-31
 Identities = 87/183 (47%), Positives = 113/183 (61%), Gaps = 3/183 (1%)

Query: 51  VPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGS 110
           +PLS   G +GMPG+TAY G  EVC  K GE V +SAA+GAVG +VGQ AKL GC VVG+
Sbjct: 1   LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60

Query: 111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMK 170
           AGS +K+  LK        FNYK    L  ALK+  P+G D YF+NVGG+ L+ VL  MK
Sbjct: 61  AGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 119

Query: 171 IRGRIAACGMISQYN-LDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHI 228
             G+IA CG IS YN +D+     +   ++ K+LR+EGFIV      +  K L  ++  +
Sbjct: 120 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 179

Query: 229 KEG 231
            EG
Sbjct: 180 LEG 182

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 83.5 bits (205), Expect = 3e-20
 Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 18/186 (9%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFI-SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           + +  +TAY+          G+  FI +  + AVG+   Q  KLL    +     +  +D
Sbjct: 9   ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68

Query: 119 LL---KNKFGFDEAFNYKEE-----ADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMK 170
            +     + G  +     +              +       +    VGGK+   +   + 
Sbjct: 69  EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128

Query: 171 IRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF----LEMIIP 226
             G +   G +S   +            + K     GF V +      +     L  II 
Sbjct: 129 NNGLMLTYGGMSFQPVT-----IPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 183

Query: 227 HIKEGK 232
             +EGK
Sbjct: 184 WYEEGK 189

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 73.5 bits (179), Expect = 2e-16
 Identities = 37/174 (21%), Positives = 68/174 (39%), Gaps = 2/174 (1%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
            G+  +TA+    EV     GE V I +A+G VG      AK +    + +    D    
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKRE 64

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
           + ++ G +   + +     +  L+     G+DV   ++ G+ +   +  +   GR    G
Sbjct: 65  MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKL 233
               Y  D   G+  L    S  +      +      Y + L+ I+ H+ +GKL
Sbjct: 125 KKDVYA-DASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 177

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 73.0 bits (178), Expect = 2e-16
 Identities = 43/188 (22%), Positives = 67/188 (35%), Gaps = 23/188 (12%)

Query: 59  ILGMPGMTAYVGFYEVCSA---KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
           I+G  G TA +    +  A        + ++ ASG VG         LG  VV  +G + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
             + LK   G        E A+     K    +      + VG K L  VL  M   G +
Sbjct: 68  THEYLK-SLGASRVLPRDEFAESRPLEK----QVWAGAIDTVGDKVLAKVLAQMNYGGCV 122

Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY 235
           AACG+   + L        +M  + + +R++G    D     P+        +       
Sbjct: 123 AACGLAGGFTLP-----TTVMPFILRNVRLQGV---DSVMTPPERRAQAWQRL------- 167

Query: 236 VEDMAEGL 243
           V D+ E  
Sbjct: 168 VADLPESF 175

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 72.7 bits (177), Expect = 2e-16
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 61  GMPGMTAYVGFYEVCSA---KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
           G  G TA +  + +           V ++ A+G VG +        G  VV S G+++  
Sbjct: 2   GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61

Query: 118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAA 177
           D L  + G  E  + ++  D    LK    +      + VGGK L ++L  ++  G +A 
Sbjct: 62  DYL-KQLGASEVISREDVYD--GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118

Query: 178 CGMISQYNLDKPEGVHNLMYLVSKRLRMEGF 208
            G+     +        +   + + + + G 
Sbjct: 119 SGLTGGGEVPAT-----VYPFILRGVSLLGI 144

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 72.0 bits (175), Expect = 5e-16
 Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 4/173 (2%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             + G+T Y    +    K  E     AA+G VG +  Q+AK LG  ++G+ G+  K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
              K G  +  NY+EE  +    +    + + V +++VG  T +  L  ++ RG + + G
Sbjct: 69  AL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 127

Query: 180 MISQYNLDKPEGVHNLMY-LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG 231
             S        G+ N    L   R  ++G+I         +    +   I  G
Sbjct: 128 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 66.5 bits (161), Expect = 5e-14
 Identities = 26/175 (14%), Positives = 50/175 (28%), Gaps = 7/175 (4%)

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           +LG    T Y         + G    +    G    ++          ++G   +KDK  
Sbjct: 8   LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67

Query: 119 LLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAA 177
             K +FG  E  N ++    +   L      G+D  FE +G   +         +G   +
Sbjct: 68  RAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 126

Query: 178 CGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232
             ++      +         +  +  +   F         PK +          K
Sbjct: 127 V-VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSE----YMSKK 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 66.1 bits (160), Expect = 6e-14
 Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 51  VPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGS 110
           VP+    G LG    T                     A GAVG      AK+ G  ++ +
Sbjct: 1   VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58

Query: 111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-TLDAVLPNM 169
               +    L  + G     N K + D  AA+K     G++   E+ G    L   +  +
Sbjct: 59  VDIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 170 KIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK 229
            I G+IA  G        +     ++  L+     + G +         KF+  ++   +
Sbjct: 118 GILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQ 171

Query: 230 EGK 232
           +GK
Sbjct: 172 QGK 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 65.8 bits (159), Expect = 9e-14
 Identities = 21/174 (12%), Positives = 45/174 (25%), Gaps = 5/174 (2%)

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           ++G    T Y    +V     G    +    G    ++          ++G   +KDK  
Sbjct: 8   LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67

Query: 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAAC 178
             K     +       +  +   L      G+D  FE +G         +        + 
Sbjct: 68  KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSV 127

Query: 179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232
            +         + +     L+      +G I           +  ++      K
Sbjct: 128 IV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGG--FKSKDSVPKLVADFMAKK 176

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 64.9 bits (157), Expect = 2e-13
 Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 11/152 (7%)

Query: 59  ILGMPGMTAYVGFY---EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
            +G  G TA +  +   E         V ++ A+G VG L        G  V  S G   
Sbjct: 8   AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67

Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
           + D L+     +     ++   +   ++    +      + VGG+TL  VL  M+  G +
Sbjct: 68  EHDYLRVLGAKEV-LARED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAV 124

Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207
           A  G+     +        +   + + + + G
Sbjct: 125 AVSGLTGGAEVPT-----TVHPFILRGVSLLG 151

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 62.3 bits (151), Expect = 7e-13
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 6/89 (6%)

Query: 2   QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQH---TDVPLSYYTG 58
             + G  VA+V++S+N  F  G +V   +GW  + +     L K+           +   
Sbjct: 61  AVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHV 120

Query: 59  ILGMPGMT-AYVGFYEVCSAKHGECVFIS 86
             G   M  A++       A  G+ V  +
Sbjct: 121 TKGFENMPAAFIEMLNG--ANLGKAVVTA 147

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 62.7 bits (151), Expect = 9e-13
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 8/175 (4%)

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           +LG    T +         + G    +          V          ++    + DK +
Sbjct: 8   LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67

Query: 119 LLKNKFGFDEAFNYKEEADL-NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAA 177
             K  FG  +  N  + ++  +  L +    G+D   E VG   +        ++G   +
Sbjct: 68  KAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 126

Query: 178 CGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232
             +      D       L+         +G +           +  ++    + K
Sbjct: 127 VLVGWTDLHDVATRPIQLI----AGRTWKGSMFGGFK--GKDGVPKMVKAYLDKK 175

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 62.7 bits (151), Expect = 1e-12
 Identities = 39/175 (22%), Positives = 59/175 (33%), Gaps = 9/175 (5%)

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           +    G TAY  F E   +  G+ V I  A G +G      A+ LG   V          
Sbjct: 8   MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66

Query: 119 LLKNKFGFDEAFNYKE---EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGR 174
            L  + G D   N +E   E    A +      G D   E  G  + L      ++  G 
Sbjct: 67  KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 126

Query: 175 IAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK 229
            +  G+        P       +LV K    +G  V D  H + K + +   + +
Sbjct: 127 YSVAGVAVP---QDPVPFKVYEWLVLKNATFKGIWVSDTSH-FVKTVSITSRNYQ 177

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (143), Expect = 1e-11
 Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 9/173 (5%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           +G+P  TAY         K GE V +  ASG VG    Q A+  G  ++G+AG+++   +
Sbjct: 9   IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 68

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
              + G  E FN++E   ++   K    +GID+  E +    L   L  +   GR+   G
Sbjct: 69  -VLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 127

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEG 231
                 +       N    ++K   + G  +       + ++   +   ++ G
Sbjct: 128 SRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIG 173

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.5 bits (138), Expect = 6e-11
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 3/92 (3%)

Query: 1   MQPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKIQ--HTDVPLSYYT 57
            Q   G G+  V +S++ + +KGD V      W+  +++    L K+     D      T
Sbjct: 73  AQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGLKVKET 132

Query: 58  GILGMPGMTAYVGFYEVCSAKHGECVFISAAS 89
              G+  M               + V IS  S
Sbjct: 133 VAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 53.0 bits (127), Expect = 4e-10
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 59  ILGMPGMTAY---VGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
           I+G  G TA    +   +         + ++ ASG VG         LG  VV  +G + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 116 KVDLLKN 122
             + LK+
Sbjct: 68  THEYLKS 74

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 25/177 (14%), Positives = 49/177 (27%), Gaps = 12/177 (6%)

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           ++G    T Y           G    +    G VG       K  G   +   G+     
Sbjct: 7   LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65

Query: 119 LLKNKFGFDEAFNYKEEAD-LNAALKRYFPEGIDVYFENVGGKT--LDAVLPNMKIRGRI 175
               + G  E  N K+    +   +      G+D   E  G     ++A+       G  
Sbjct: 66  PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125

Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232
              G+         E +     L+     ++G +         + +  ++    + K
Sbjct: 126 VVLGL-----ASPNERLPLDPLLLLTGRSLKGSVFGGF---KGEEVSRLVDDYMKKK 174

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.7 bits (104), Expect = 2e-06
 Identities = 36/175 (20%), Positives = 66/175 (37%), Gaps = 16/175 (9%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
             +  +TAY+   +   A+ GE V + AA+GA+G    Q A+ +G  V+ +A   +K+ L
Sbjct: 9   FPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
                  + A   +         +R    G       V GK ++  L  +   GR+   G
Sbjct: 68  PLALGAEEAATYAEVP-------ERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120

Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH---LYPKFLEMIIPHIKEG 231
                           + L+ + L + GF +        L  + L  ++P +   
Sbjct: 121 AAEGEVAP-----IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 170

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 31/174 (17%), Positives = 55/174 (31%), Gaps = 9/174 (5%)

Query: 60  LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
           +     T + G  E+   + G  V +      VG +    AKL G   +   GS+     
Sbjct: 9   ITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVE 66

Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-TLDAVLPNMKIRGRIAAC 178
               +G  +  NYK     +  +K    +G+D      GG  TL   +  +K  G I+  
Sbjct: 67  AAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 126

Query: 179 GMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232
                 +      V     +  K ++  G              E +   +   +
Sbjct: 127 NYHGSGDALLIPRVEWGCGMAHKTIKG-GLCPGGRLR-----AERLRDMVVYNR 174

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 40.6 bits (94), Expect = 6e-05
 Identities = 31/163 (19%), Positives = 50/163 (30%), Gaps = 21/163 (12%)

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
            L     T Y G         G  V+++ A G VG      A+LLG  VV          
Sbjct: 6   CLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL 63

Query: 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG----------------KTL 162
                 GF+ A    +               +D   + VG                   L
Sbjct: 64  AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123

Query: 163 DAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205
           ++++   ++ G+I   G+   Y  + P  V     + S  +R 
Sbjct: 124 NSLMQVTRVAGKIGIPGL---YVTEDPGAVDAAAKIGSLSIRF 163

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 35.3 bits (80), Expect = 0.003
 Identities = 24/179 (13%), Positives = 43/179 (24%), Gaps = 17/179 (9%)

Query: 59  ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118
           ++G    + Y           G    +    G VG       K+ G   + +     +  
Sbjct: 8   LIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF 66

Query: 119 LLKNKFGFDEAFNYKEEAD-LNAALKRYFPEGIDVYFENVGGKTL--DAVLPNMKIRGRI 175
                 G  +  N +E    +   +      G+D   +  G       AV   +   G  
Sbjct: 67  PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSC 126

Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV--LDHYHLYPKFLEMIIPHIKEGK 232
              G        K + +      V     + G            P  +       K  K
Sbjct: 127 TVVGA-------KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSD----YKNKK 174

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	269
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.97
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.96
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.96
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.95
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.94
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.94
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.94
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.92
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.91
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.65
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.62
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.6
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.52
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.48
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.45
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.4
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.36
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.35
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.34
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.32
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.31
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.27
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.26
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.2
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.17
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.15
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.13
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.06
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.05
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.03
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.01
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	98.99
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	98.85
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	98.72
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	98.71
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	98.69
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.65
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.57
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.56
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.56
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.56
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.55
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.52
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.46
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.43
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.43
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.42
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.42
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.42
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.41
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.41
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.4
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.39
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.38
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.37
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.37
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.36
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.35
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.3
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.3
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.28
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.26
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	98.26
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.25
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.25
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.23
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.23
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.23
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.21
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.2
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.18
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.17
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.17
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.17
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.17
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.16
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.16
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.14
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.12
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.12
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.11
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	98.1
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.08
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.07
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.06
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.04
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.04
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	98.04
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.02
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.02
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.99
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.96
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.95
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.95
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.94
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.94
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.93
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.91
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.89
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.85
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.8
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.78
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.76
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.72
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.72
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.72
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.69
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.66
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.65
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.64
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.63
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.62
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.6
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.6
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.58
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.56
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	97.55
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.55
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.53
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.52
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.49
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	97.41
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.4
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.4
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.39
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.34
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	97.34
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.32
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	97.2
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	97.18
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.16
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.14
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.13
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.12
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	97.09
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	97.04
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.99
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.98
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.98
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.97
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.96
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	96.96
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.95
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.94
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.93
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.9
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.88
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.86
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.84
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.82
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.76
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	96.76
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.74
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	96.7
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.67
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.64
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.64
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	96.63
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	96.61
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	96.59
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.58
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.57
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.57
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.57
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.56
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.54
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	96.54
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.52
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	96.51
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	96.5
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.49
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	96.43
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.41
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.35
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.29
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.23
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	96.19
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.19
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.18
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.12
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	96.08
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.08
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.04
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.03
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.03
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	96.03
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.0
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.98
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.98
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.92
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.89
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.89
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	95.85
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.84
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.79
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.77
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.75
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	95.74
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	95.71
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.67
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.63
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.62
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	95.62
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.59
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.58
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.55
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.49
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.49
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.45
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	95.39
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.36
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	95.36
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	95.34
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.34
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.34
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.31
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.25
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	95.15
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.11
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	95.08
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.04
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.01
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.98
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.98
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.98
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.96
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	94.9
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.9
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.88
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.82
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.79
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.76
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	94.75
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.72
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.7
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.7
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	94.64
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.59
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.56
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.55
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.54
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.54
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.45
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.42
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.4
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	94.39
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	94.38
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.34
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.29
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.23
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.23
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.21
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.18
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.17
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.12
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	94.05
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	94.03
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.01
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.0
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.92
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.92
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.79
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	93.78
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.77
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	93.77
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	93.69
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.64
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.61
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	93.6
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.5
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.44
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.37
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	93.33
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	93.28
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.23
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	93.15
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.06
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.03
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.01
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.9
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	92.89
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	92.88
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	92.83
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.78
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	92.73
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.66
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.45
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.41
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	92.37
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	92.31
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.29
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	92.1
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.02
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.96
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.81
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	91.81
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.79
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.77
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.77
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.63
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.63
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.59
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.31
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	91.27
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.23
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	91.17
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.13
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.03
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	90.85
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	90.81
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.74
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	90.55
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.53
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.5
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.44
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.24
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.21
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	90.15
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	90.15
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	89.93
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.76
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.69
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.51
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	89.36
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.15
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.03
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.02
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	88.85
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	88.75
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.63
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	88.21
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.05
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	88.05
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.01
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.86
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	87.77
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	87.65
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.56
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	87.5
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.39
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.34
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.32
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	87.26
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	87.2
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	87.08
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	86.99
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	86.94
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	86.93
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	86.88
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	86.82
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.69
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	86.65
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.55
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.53
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.52
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.5
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.45
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	86.38
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	86.19
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.11
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	85.99
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.86
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	85.73
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.66
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.44
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.36
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.33
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	85.16
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.78
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	84.75
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	84.69
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	84.56
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	84.55
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	84.55
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	83.99
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	83.98
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.72
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	83.4
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	83.31
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.15
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.79
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	82.43
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	82.32
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	82.28
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	82.23
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	82.22
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	82.15
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	82.12
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	82.06
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	82.02
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	81.94
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	81.82
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	81.74
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.66
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.9
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.72
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	80.69
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	80.3

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.97  E-value=8.2e-31  Score=197.08  Aligned_cols=177  Identities=47%  Similarity=0.740  Sum_probs=151.0

Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      ++...++++++++|||++|.+.+++++|++|||+||+|++|++++|+||..|++||++++++++.++++ ++|+++++++
T Consensus         3 ~~~~l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~   81 (182)
T d1v3va2           3 LSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNY   81 (182)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEET
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhccc
Confidence            443357889999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             CChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCC-CCCccchHHHhhcceeeeeeee
Q 024337          133 KEEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDK-PEGVHNLMYLVSKRLRMEGFIV  210 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  210 (269)
                      +++ ++.+.+.+.+.+ ++|++|||+|++.++.++++++++|+++.+|....++... ......+..++.+++++.|+..
T Consensus        82 ~~~-~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~  160 (182)
T d1v3va2          82 KTV-NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIV  160 (182)
T ss_dssp             TSC-SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCG
T ss_pred             ccc-cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEE
Confidence            887 777777766655 9999999999999999999999999999999765442222 2334567789999999999988


Q ss_pred             ccc-ccchHHHHHHHHHHHHCC
Q 024337          211 LDH-YHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       211 ~~~-~~~~~~~~~~~~~~~~~g  231 (269)
                      .++ .+...+.++++++++++|
T Consensus       161 ~~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         161 YRWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHTT
T ss_pred             eccChHHHHHHHHHHHHHHhCc
Confidence            776 334556788889988876

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=2.3e-31  Score=200.58  Aligned_cols=174  Identities=22%  Similarity=0.346  Sum_probs=151.0

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      ++|+++++++|||++|.+.++++++++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+++.
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV   80 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence            689999999999999988889999999999999999999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-
Q 024337          136 ADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-  213 (269)
Q Consensus       136 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  213 (269)
                       ++.+.+++.+++ ++|++|||+|++.++.++++++++|+++.+|.....     ........++.+++++.++..... 
T Consensus        81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVY-----ADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGT-----TTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCC-----CCcccchHHHhCCcEEEEEEcccee
Confidence             999999999987 999999999999999999999999999999875532     111222334568888888765433 


Q ss_pred             ---ccchHHHHHHHHHHHHCCCeeee
Q 024337          214 ---YHLYPKFLEMIIPHIKEGKLVYV  236 (269)
Q Consensus       214 ---~~~~~~~~~~~~~~~~~g~~~~~  236 (269)
                         +...++.++++.+++++|+++|.
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCcee
Confidence               34456789999999999999974

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.5e-31  Score=196.27  Aligned_cols=163  Identities=25%  Similarity=0.374  Sum_probs=142.8

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      ++|++++++.|||++|.+.++++++++|||+||+|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+++.
T Consensus         5 ~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~   83 (174)
T d1yb5a2           5 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV   83 (174)
T ss_dssp             HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST
T ss_pred             HHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCcccccccccc
Confidence            588999999999999988889999999999999999999999999999999999999999999999 9999999999988


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc
Q 024337          136 ADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY  214 (269)
Q Consensus       136 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (269)
                       ++.+.+++.+++ ++|++|||+|+..++.++++++++|+++.+|..+       ..+.++..++.+++++.|+.+... 
T Consensus        84 -~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~-------~~~~~~~~~~~k~~~i~g~~~~~~-  154 (174)
T d1yb5a2          84 -NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG-------TIEINPRDTMAKESSIIGVTLFSS-  154 (174)
T ss_dssp             -THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS-------CEEECTHHHHTTTCEEEECCGGGC-
T ss_pred             -cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC-------CCCCCHHHHHHCCCEEEEEEecCC-
Confidence             999999998877 8999999999999999999999999999998632       234566788899999999876442 


Q ss_pred             cchHHHHHHHHHHHHC
Q 024337          215 HLYPKFLEMIIPHIKE  230 (269)
Q Consensus       215 ~~~~~~~~~~~~~~~~  230 (269)
                        ..+.++++.+++++
T Consensus       155 --~~~~~~~~~~~l~~  168 (174)
T d1yb5a2         155 --TKEEFQQYAAALQA  168 (174)
T ss_dssp             --CHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHHHH
Confidence              34555666655554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=5.6e-29  Score=185.47  Aligned_cols=168  Identities=21%  Similarity=0.246  Sum_probs=147.4

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      .+++++|++.|||+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|+++++|+++
T Consensus         5 ~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (174)
T d1f8fa2           5 LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKT   82 (174)
T ss_dssp             GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCC
Confidence            478999999999999988899999999999998 9999999999999999 6677788999999999 999999999998


Q ss_pred             hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337          135 EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH  213 (269)
Q Consensus       135 ~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (269)
                      + ++.+.+++.+++++|++|||+|. ..++.+++.++++|+++.+|....    .....+++..++.+++++.|+..+++
T Consensus        83 ~-~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~----~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          83 Q-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQL----GTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             S-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCST----TCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             c-CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCC----CcccccCHHHHHHCCCEEEEEEecCC
Confidence            7 89999999998899999999997 788999999999999999986432    22335677889999999999876553


Q ss_pred             ccchHHHHHHHHHHHHCCC
Q 024337          214 YHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       214 ~~~~~~~~~~~~~~~~~g~  232 (269)
                        ..+++++++++++++|+
T Consensus       158 --~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 --SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             --CHHHHHHHHHHHHHTTS
T ss_pred             --ChHHHHHHHHHHHHcCC
Confidence              23577899999999885

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.8e-29  Score=188.41  Aligned_cols=169  Identities=26%  Similarity=0.305  Sum_probs=139.0

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      ++|++++++.|||++|.+.++++++++|+|+||+|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|++++
T Consensus         5 ~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~~~~   83 (179)
T d1qora2           5 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE   83 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEECCCC
Confidence            589999999999999988889999999999999999999999999999999999999999999999 9999999999997


Q ss_pred             hhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhc-ceeeeeeeeccc
Q 024337          136 ADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSK-RLRMEGFIVLDH  213 (269)
Q Consensus       136 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  213 (269)
                       ++.+.+++.+++ ++|+++|++|++.+..++++++++|+++.++....     .....++..+..+ .+.+.+..+..+
T Consensus        84 -d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~  157 (179)
T d1qora2          84 -DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSG-----AVTGVNLGILNQKGSLYVTRPSLQGY  157 (179)
T ss_dssp             -CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTC-----CCCCBCTHHHHHTTSCEEECCCHHHH
T ss_pred             -CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccC-----CccccchhhhhccceEEEEeeEEeee
Confidence             999999999988 99999999999999999999999999999887543     2222333333333 333333222222


Q ss_pred             ---ccchHHHHHHHHHHHHCC
Q 024337          214 ---YHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       214 ---~~~~~~~~~~~~~~~~~g  231 (269)
                         +....+.++++++++++|
T Consensus       158 ~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         158 ITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHHHHHHHCc
Confidence               233455667788888876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=6.5e-29  Score=187.17  Aligned_cols=179  Identities=38%  Similarity=0.655  Sum_probs=143.7

Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCC--CEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcee
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEA  129 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~--~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~  129 (269)
                      +++...+++.++.|||++|.+.++++++  ++|||+||+|++|++++|+||.+|+ .|++++.++++...+.+++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            4555667889999999999998899987  8999999999999999999999999 566677777776666548999999


Q ss_pred             EecCChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCC----CccchHHHhhcceee
Q 024337          130 FNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPE----GVHNLMYLVSKRLRM  205 (269)
Q Consensus       130 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~  205 (269)
                      +|+.++ ++.+.+++.++.++|++||++|++.++.++++++++|+++.+|...+++...+.    .......+..+++++
T Consensus        82 i~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~  160 (187)
T d1vj1a2          82 VNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR  160 (187)
T ss_dssp             EETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred             eeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence            999998 999999999877999999999999999999999999999999875543221111    112234566789999


Q ss_pred             eeeeecccccchHHHHHHHHHHHHCCC
Q 024337          206 EGFIVLDHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      .++...++.+...+.++++.+++.+|+
T Consensus       161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         161 ERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            998877777777888999999999885

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=1.7e-29  Score=187.06  Aligned_cols=168  Identities=21%  Similarity=0.269  Sum_probs=132.4

Q ss_pred             hhhhcCCcchhHHHHHH---HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           56 YTGILGMPGMTAYVGFY---EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~---~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      ++|++++++.|||++++   +.++.+++++|||+||+|++|.+++|+||.+|++|+++++++++.++++ ++|+++++|+
T Consensus         5 eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi~~   83 (176)
T d1xa0a2           5 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAR   83 (176)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEEC
T ss_pred             HHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceeeec
Confidence            68999999999997764   4577889999999999999999999999999999999999999999999 9999999998


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      ++  .+.+.++...++++|+|||++|+..+..++++|+++|+++.+|...+     .....+...++.+++++.|.....
T Consensus        84 ~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g-----~~~~~~~~~~~~k~~~i~Gv~~~~  156 (176)
T d1xa0a2          84 ED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGG-----AEVPTTVHPFILRGVSLLGIDSVY  156 (176)
T ss_dssp             C-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSS-----SCCCCCSHHHHHTTCEEEECCSSS
T ss_pred             ch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccC-----cccCCCHHHHHHCCcEEEEEeCCc
Confidence            75  44444444444499999999999999999999999999999998653     445577788999999999975433


Q ss_pred             cccchHHHHHHHHHHHHCCCeee
Q 024337          213 HYHLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~~~~  235 (269)
                      .   ..+....+.+.+. +.++|
T Consensus       157 ~---~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         157 C---PMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             C---CHHHHHHHHHHHH-TTTCC
T ss_pred             C---CHHHHHHHHHHHh-cccCC
Confidence            2   1233444444442 55554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.96  E-value=4.8e-28  Score=179.97  Aligned_cols=163  Identities=20%  Similarity=0.272  Sum_probs=146.2

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ++|+++|++.|||+++ +..+++++++|+|+|++|++|++++|+++.+|+ +|+++++++++.++++ ++|+++++|+++
T Consensus         5 eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~   82 (170)
T d1jvba2           5 EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM   82 (170)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCC
Confidence            6899999999999999 568999999999999889999999999999996 9999999999999999 999999999988


Q ss_pred             hhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          135 EADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       135 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      . ++.+.+++.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...      ....++...++.+++++.|+..++
T Consensus        83 ~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~------~~~~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          83 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLHYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSC------CCCCCCHHHHHHHTCEEEECCSCC
T ss_pred             c-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEecccc------CccccCHHHHHhCCcEEEEEecCC
Confidence            7 888888888877 89999999997 67899999999999999998753      234566778899999999988765


Q ss_pred             cccchHHHHHHHHHHHHCCC
Q 024337          213 HYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~  232 (269)
                           .++++++++++++|+
T Consensus       156 -----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 -----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             -----HHHHHHHHHHHHTTS
T ss_pred             -----HHHHHHHHHHHHcCC
Confidence                 677899999999885

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=6.3e-27  Score=174.04  Aligned_cols=161  Identities=22%  Similarity=0.279  Sum_probs=139.6

Q ss_pred             hhhhcCCcchhHHHHHHHhh-cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           56 YTGILGMPGMTAYVGFYEVC-SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~-~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      ++|+|++++.|||+++.+.. .++++++|+|+|+ |++|++++|+++.+|+ +|+++++++++.++++ ++|+++++|++
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~   85 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR   85 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence            68999999999999997765 4899999999997 9999999999999998 8888899999999999 99999999988


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          134 EEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      +  +..+...+.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...       ....++..++.+++++.|+..+
T Consensus        86 ~--~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          86 R--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             S--CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSC
T ss_pred             c--cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEec
Confidence            7  455556666766 99999999998 67999999999999999998632       2346677889999999999876


Q ss_pred             ccccchHHHHHHHHHHHHCCC
Q 024337          212 DHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      +     .++++++++++.+|+
T Consensus       157 ~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N-----YVELHELVTLALQGK  172 (172)
T ss_dssp             C-----HHHHHHHHHHHHTTS
T ss_pred             C-----HHHHHHHHHHHHcCC
Confidence            6     566889999999885

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=4.2e-27  Score=176.68  Aligned_cols=164  Identities=23%  Similarity=0.295  Sum_probs=138.2

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      .+|+++|+++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|++++++++++++++ ++|+++++|+.+
T Consensus         5 ~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~   82 (182)
T d1vj0a2           5 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTT
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEeccc
Confidence            478999999999999988889999999999998 9999999999999999 8999999999999999 999999999887


Q ss_pred             hhhH---HHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc-hHHHhhcceeeeee
Q 024337          135 EADL---NAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN-LMYLVSKRLRMEGF  208 (269)
Q Consensus       135 ~~~~---~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  208 (269)
                      . +.   .+.+.+.+++ ++|+||||+|+ ..++.++++++++|+++.+|....    ....+.+ +..++.+++++.|+
T Consensus        83 ~-~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~----~~~~~~~~~~~l~~k~l~i~G~  157 (182)
T d1vj0a2          83 T-SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP----QDPVPFKVYEWLVLKNATFKGI  157 (182)
T ss_dssp             S-CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC----CCCEEECHHHHTTTTTCEEEEC
T ss_pred             c-chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCC----CCccccccHHHHHHCCcEEEEE
Confidence            5 44   4456777777 89999999997 678999999999999999986432    1122233 34577899999998


Q ss_pred             eecccccchHHHHHHHHHHHHCC
Q 024337          209 IVLDHYHLYPKFLEMIIPHIKEG  231 (269)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~g  231 (269)
                      +.++     .+.+++++++++++
T Consensus       158 ~~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         158 WVSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             CCCC-----HHHHHHHHHHHHTC
T ss_pred             EeCC-----HHHHHHHHHHHHHC
Confidence            8765     56677788887764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=4.7e-27  Score=173.90  Aligned_cols=162  Identities=24%  Similarity=0.309  Sum_probs=138.1

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      ++|+++|++.|||+++ +.++++++++|+|+|+ |++|++++|++|.+|++|++++++++++++++ ++|+++++|+++.
T Consensus         5 ~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~   81 (166)
T d1llua2           5 EIAPILCAGVTVYKGL-KQTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQE   81 (166)
T ss_dssp             HHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccccch
Confidence            5899999999999999 5589999999999997 99999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccccc
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH  215 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (269)
                       +..+.+++.+.+..++++++.+...++.++++++++|+++.+|...+      ....+...++.+++++.|+..++   
T Consensus        82 -~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~---  151 (166)
T d1llua2          82 -DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGT---  151 (166)
T ss_dssp             -CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecC---
Confidence             88888877665444444444445899999999999999999987432      33466788899999999987755   


Q ss_pred             chHHHHHHHHHHHHCCC
Q 024337          216 LYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       216 ~~~~~~~~~~~~~~~g~  232 (269)
                        .++++++++++++|.
T Consensus       152 --~~d~~e~l~l~~~Gl  166 (166)
T d1llua2         152 --RADLQEALDFAGEGL  166 (166)
T ss_dssp             --HHHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHHCcC
Confidence              567889999998873

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=3e-28  Score=180.80  Aligned_cols=145  Identities=26%  Similarity=0.355  Sum_probs=120.3

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      ++|++++++.|||++|. .++++++++|||+||+|++|++++|+||.+|++|+++++++++.+.++ ++|+++++|+.+ 
T Consensus         5 eAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~-   81 (171)
T d1iz0a2           5 EAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAE-   81 (171)
T ss_dssp             HHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGG-
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeehhh-
Confidence            58899999999999995 589999999999999999999999999999999999999999999999 999999998864 


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH  213 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (269)
                        ....+..  ++++|++|||+| ..++.++++++++|+++.+|...+     .....++..++.+++++.|+++.++
T Consensus        82 --~~~~~~~--~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g-----~~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          82 --VPERAKA--WGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEG-----EVAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             --HHHHHHH--TTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             --hhhhhhc--cccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCC-----CCCCccHHHHHHCCcEEEEEeCcCh
Confidence              2333332  238999999988 578999999999999999987543     2334556788899999999987654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=3.3e-27  Score=175.31  Aligned_cols=167  Identities=19%  Similarity=0.156  Sum_probs=134.7

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      +++.+++++.|+|+++ +.++++++++|+|+|+ |++|++++|+||.+|+ +|++++.+++|++.++ ++|+++++|+++
T Consensus         5 ~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~   81 (174)
T d1jqba2           5 NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILNYKN   81 (174)
T ss_dssp             HHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCccccccccc
Confidence            4667889999999999 6689999999999987 9999999999999998 8999999999999999 999999999988


Q ss_pred             hhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          135 EADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       135 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      + ++.+.+.+.+++ ++|++|||+|+ ..++.++++++++|+++.+|......  ....+........++.++.++....
T Consensus        82 ~-~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~--~~~~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          82 G-HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGD--ALLIPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSS--EEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred             h-hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCC--cCcCcHhHHHHHhCccEEEEecCCC
Confidence            7 899999999988 99999999997 77899999999999999998754210  0000011122344667777765533


Q ss_pred             cccchHHHHHHHHHHHHCCC
Q 024337          213 HYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~  232 (269)
                          .+...+.+.+++..|+
T Consensus       159 ----~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 ----GRLRAERLRDMVVYNR  174 (174)
T ss_dssp             ----HHHHHHHHHHHHHTTS
T ss_pred             ----CcccHHHHHHHHHcCC
Confidence                2455677778887764

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=8.3e-27  Score=172.99  Aligned_cols=164  Identities=24%  Similarity=0.283  Sum_probs=143.3

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      ++|++++++.|||+++ +..+++++++|+|+|+ |++|++++|+++.+|++|++++.++++.++++ ++|++.++++.+.
T Consensus         5 eAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~~~~   81 (168)
T d1rjwa2           5 EAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceecccccc
Confidence            6899999999999999 4688999999999987 99999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccccc
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH  215 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (269)
                       ++.+.+++.+++..|+++++.+...+..++++++++|+++.+|...      .....+...++.+++++.|+....   
T Consensus        82 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~------~~~~~~~~~~~~~~~~i~gs~~~~---  151 (168)
T d1rjwa2          82 -DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP------EEMPIPIFDTVLNGIKIIGSIVGT---  151 (168)
T ss_dssp             -CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS------SEEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEeccccc------CCCCCCHHHHHHCCcEEEEEeeCC---
Confidence             8888898888765666655555588999999999999999998753      234567788899999999987654   


Q ss_pred             chHHHHHHHHHHHHCCCee
Q 024337          216 LYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       216 ~~~~~~~~~~~~~~~g~~~  234 (269)
                        .++++++++++++|+++
T Consensus       152 --~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 --RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              67799999999999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.94  E-value=3.8e-27  Score=177.81  Aligned_cols=171  Identities=21%  Similarity=0.303  Sum_probs=137.3

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEe-cCcchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHcCCceeE
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFIS-AASGAVGQLVGQFAKLLGCYVVGSAGSKD----KVDLLKNKFGFDEAF  130 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~-ga~g~vG~~~i~~a~~~G~~V~~~~~s~~----~~~~~~~~~g~~~~~  130 (269)
                      ++|++++++.|||++|.+.+++++|++++|+ ||+|++|++++|+||.+|++|++++++.+    +.+.++ ++|+++++
T Consensus         5 ~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad~vi   83 (189)
T d1gu7a2           5 QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVI   83 (189)
T ss_dssp             HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEE
T ss_pred             HHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hccccEEE
Confidence            6899999999999999888999999988885 78899999999999999999999986544    455677 99999999


Q ss_pred             ecCCh--hhHHHHHHHHC---CCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337          131 NYKEE--ADLNAALKRYF---PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM  205 (269)
Q Consensus       131 ~~~~~--~~~~~~i~~~~---~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (269)
                      +++..  .++.+.+++.+   ++++|++|||+|++.+..++++|+++|+++.+|...+     .....+...++.+++++
T Consensus        84 ~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          84 TEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSF-----QPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             EHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSS-----CCEEECHHHHHHSCCEE
T ss_pred             eccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccC-----CCccCcHHHHHHCCcEE
Confidence            87542  13444454433   4489999999999999999999999999999987542     23345677888899999


Q ss_pred             eeeeeccc----ccchHHHHHHHHHHHHCCC
Q 024337          206 EGFIVLDH----YHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       206 ~~~~~~~~----~~~~~~~~~~~~~~~~~g~  232 (269)
                      .|+++..+    +....+.++++.+++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99877554    2334567888888888775

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=7.8e-27  Score=172.82  Aligned_cols=161  Identities=19%  Similarity=0.184  Sum_probs=134.9

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      .+|+++|++.|+|+++ +.+++++|++|+|+|+ |++|++++|++|.+|++|+++++++++.++++ ++|+++++++.+.
T Consensus         5 ~AApl~cag~Ta~~al-~~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~   81 (168)
T d1piwa2           5 LAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGT
T ss_pred             HHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccch
Confidence            3789999999999999 4689999999999997 99999999999999999999999999999999 9999999987653


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc---hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGG---KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      .++.+    ...+++|.++||++.   ..+..++++++++|+++.+|....      ....+...++.+++++.|+..++
T Consensus        82 ~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          82 GDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS  151 (168)
T ss_dssp             SCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC
T ss_pred             HHHHH----hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEEeeCC
Confidence            13322    233479999999886   257899999999999999987442      22345556788999999987765


Q ss_pred             cccchHHHHHHHHHHHHCCCee
Q 024337          213 HYHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~~~  234 (269)
                           .+.++++++++++|+++
T Consensus       152 -----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 -----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             -----HHHHHHHHHHHHHTTCC
T ss_pred             -----HHHHHHHHHHHHhCCCC
Confidence                 66789999999999874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.4e-26  Score=171.42  Aligned_cols=160  Identities=23%  Similarity=0.284  Sum_probs=132.9

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE  135 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~  135 (269)
                      .+|+++|++.|+|+++ +.+++++|++|+|+|+ |++|++++|+||.+|+++++++++++++++++ ++|+++++|+.+.
T Consensus         8 ~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~   84 (168)
T d1uufa2           8 AVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA   84 (168)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH
T ss_pred             HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh
Confidence            4788999999999999 5689999999999997 99999999999999999999999999999999 9999999998875


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY  214 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (269)
                       +....    ..+++|++|||+|. ..+..++++++++|+++.+|...+     +....+...++.+++++.|+..+.  
T Consensus        85 -~~~~~----~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~l~~k~~~i~Gs~~~~--  152 (168)
T d1uufa2          85 -DEMAA----HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGG--  152 (168)
T ss_dssp             -HHHHT----TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC--
T ss_pred             -hHHHH----hcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC-----CcccccHHHHHHCCcEEEEEeecC--
Confidence             33221    12389999999997 679999999999999999987542     333456778888999999988765  


Q ss_pred             cchHHHHHHHHHHHHCCCe
Q 024337          215 HLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       215 ~~~~~~~~~~~~~~~~g~~  233 (269)
                         .++++++++++++++|
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               6678888988887653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.4e-26  Score=169.31  Aligned_cols=165  Identities=17%  Similarity=0.198  Sum_probs=138.0

Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      +++.|++..++++||+++ +.++++++++|+|+|+ |++|++++|+++++|+ +|++++++++++++++ ++|++++++.
T Consensus         2 S~e~Aal~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~   78 (171)
T d1pl8a2           2 TFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI   78 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcccccc
Confidence            446677889999999999 5689999999999998 9999999999999999 8999999999999999 9999999888


Q ss_pred             CChhhHHHHHH---HHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeee
Q 024337          133 KEEADLNAALK---RYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF  208 (269)
Q Consensus       133 ~~~~~~~~~i~---~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (269)
                      .+. +..+..+   ...+.++|++|||+|+ ..++.++++++++|+++.+|.+..      ....++..++.+++++.|+
T Consensus        79 ~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          79 SKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             SSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEEC
T ss_pred             ccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHHCCcEEEEE
Confidence            775 5444333   2234489999999997 688999999999999999987542      2346778889999999998


Q ss_pred             eecccccchHHHHHHHHHHHHCCCee
Q 024337          209 IVLDHYHLYPKFLEMIIPHIKEGKLV  234 (269)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~g~~~  234 (269)
                      +.+      .+.++++++++++|+++
T Consensus       152 ~~~------~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         152 FRY------CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             CSC------SSCHHHHHHHHHTTSCC
T ss_pred             eCC------HhHHHHHHHHHHcCCCC
Confidence            643      23478889999998874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=6.5e-26  Score=169.39  Aligned_cols=169  Identities=19%  Similarity=0.196  Sum_probs=135.5

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ++|+++|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|+++++++++.++++ ++|+++++|+.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~   82 (176)
T d2fzwa2           5 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCc
Confidence            588999999999999988899999999999998 8999999999999997 8888888899999999 999999998865


Q ss_pred             h-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          135 E-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       135 ~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      . .+..+.++..+++++|++||++|. ..+..+..+++++|+++.++....    ...........+.++.++.|+..++
T Consensus        83 ~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          83 FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA----SGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCC----TTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeecc----ccccccccHHHHHCCCEEEEEeeeC
Confidence            2 145566666666699999999997 677888999999888887754332    1122223334455778999887765


Q ss_pred             cccchHHHHHHHHHHHHCCC
Q 024337          213 HYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~  232 (269)
                      +.  ..+++.++++++++|+
T Consensus       159 ~~--~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WK--SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CC--HHHHHHHHHHHHHTTS
T ss_pred             Cc--HHHHHHHHHHHHHcCC
Confidence            42  3567888999998875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.94  E-value=6e-26  Score=168.55  Aligned_cols=167  Identities=17%  Similarity=0.170  Sum_probs=134.0

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ++|.|.|++.|+|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|+++++|+++
T Consensus         4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~   81 (174)
T d1p0fa2           4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKD   81 (174)
T ss_dssp             GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence            578999999999999888899999999999997 9999999999999998 8999999999999999 999999999876


Q ss_pred             hhh-HHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhc-CCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          135 EAD-LNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKI-RGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       135 ~~~-~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      ... ..+..+..+++++|++|||+|. ..+..++..+++ +|+++.+|....    ....++++..+ .+++++.|+..+
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~----~~~~~~~~~~~-~~~~~i~Gs~~G  156 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP----NERLPLDPLLL-LTGRSLKGSVFG  156 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCT----TCCEEECTHHH-HTTCEEEECSGG
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecC----ccccccCHHHH-hCCCEEEEEEeC
Confidence            412 4455555566699999999998 778888888877 599999987532    12222333333 467899998765


Q ss_pred             ccccchHHHHHHHHHHHHCCC
Q 024337          212 DHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      ++   ..++++++++++.+|+
T Consensus       157 ~~---~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         157 GF---KGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GC---CGGGHHHHHHHHHTTS
T ss_pred             CC---CHHHHHHHHHHHHcCC
Confidence            53   2346788888888875

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=7.9e-26  Score=167.89  Aligned_cols=164  Identities=18%  Similarity=0.226  Sum_probs=134.6

Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      +++.|++..++++||+++ +.++++++++|+|+|+ |++|++++|+++.+|++|++++++++++++++ ++|++..++.+
T Consensus         2 S~e~Aal~ePla~a~~a~-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~   78 (170)
T d1e3ja2           2 SLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVD   78 (170)
T ss_dssp             CHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEecc
Confidence            456777888999999999 5688999999999986 99999999999999999999999999999999 99998766544


Q ss_pred             Ch----hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeee
Q 024337          134 EE----ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF  208 (269)
Q Consensus       134 ~~----~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (269)
                      ..    .+..+.+++..++++|++|||+|+ ..++.++++++++|+++.+|....      ....++..++.+++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~gs  152 (170)
T d1e3ja2          79 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSV  152 (170)
T ss_dssp             TTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEEC
T ss_pred             ccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEEEE
Confidence            31    133455666666699999999998 678999999999999999987532      2346778899999999987


Q ss_pred             eecccccchHHHHHHHHHHHHCCC
Q 024337          209 IVLDHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      +...      +.++++++++++|+
T Consensus       153 ~~~~------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         153 FRYC------NDYPIALEMVASGR  170 (170)
T ss_dssp             CSCS------SCHHHHHHHHHTTS
T ss_pred             ECCH------HHHHHHHHHHHcCC
Confidence            5432      24677888888875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.94  E-value=5.7e-26  Score=168.38  Aligned_cols=166  Identities=15%  Similarity=0.149  Sum_probs=133.3

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ++|.|+|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.+++|+++++ ++|+++++|+.+
T Consensus         5 ~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~   82 (174)
T d1e3ia2           5 RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRE   82 (174)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCcc
Confidence            589999999999999978899999999999987 9999999999999999 7999999999999999 999999998765


Q ss_pred             hhhHHHHHH-HHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          135 EADLNAALK-RYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       135 ~~~~~~~i~-~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      ..+....+. ...++++|++|||+|. ..++.++++++++ |+++.+|...+      ....++..++. +.++.|+..+
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~~~-~k~i~Gs~~G  155 (174)
T d1e3ia2          83 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVIL-GRSINGTFFG  155 (174)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHHT-TCEEEECSGG
T ss_pred             chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHHhc-cCEEEEEEee
Confidence            313344444 4445599999999998 7899999999996 99999987432      22344444443 4577777665


Q ss_pred             ccccchHHHHHHHHHHHHCCC
Q 024337          212 DHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      ++  ...+++.++++++++|+
T Consensus       156 s~--~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         156 GW--KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GC--CHHHHHHHHHHHHHTTS
T ss_pred             CC--ChHHHHHHHHHHHHCcC
Confidence            54  23567888888888875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=3.8e-25  Score=165.06  Aligned_cols=169  Identities=18%  Similarity=0.182  Sum_probs=134.0

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ++|+++|++.|+|+++.+.+++++|++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++ ++|+++++++.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (176)
T d2jhfa2           5 KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEEecCC
Confidence            589999999999999988899999999999999 8999999999999987 9999999999999999 999999888754


Q ss_pred             hhh-HHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          135 EAD-LNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       135 ~~~-~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      ..+ ..+..+...++++|++|||+|. ..++.++..++++|+.+.++....    ..........++.+++++.|+..++
T Consensus        83 ~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          83 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP----DSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCC----TTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCC----CcccccccHHHHhCCCEEEEEEEeC
Confidence            213 4445555555699999999997 677889999999765555544321    1222233345667899999987655


Q ss_pred             cccchHHHHHHHHHHHHCCC
Q 024337          213 HYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~  232 (269)
                      +  ..++++.++++++.+|+
T Consensus       159 ~--~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 F--KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             C--CHHHHHHHHHHHHHTTS
T ss_pred             C--CHHHHHHHHHHHHHCcC
Confidence            4  23667888889888875

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=9.5e-27  Score=172.62  Aligned_cols=164  Identities=21%  Similarity=0.282  Sum_probs=130.2

Q ss_pred             hhhhcCCcchhHHHHHHHh---hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337           56 YTGILGMPGMTAYVGFYEV---CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY  132 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~---~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~  132 (269)
                      ++|++++++.|||++++..   ....++++|||+||+|++|++++|+||++|++|+++++++++.+.++ ++|+++++|+
T Consensus         5 ~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~vi~~   83 (177)
T d1o89a2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRVLPR   83 (177)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEEEEG
T ss_pred             HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhcccccccc
Confidence            7899999999999887432   33445569999999999999999999999999999999999999999 9999999998


Q ss_pred             CChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          133 KEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       133 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      ++. ++.+   ...+..+|.++|++|+..+...+++++++|+++.+|...+     .....+...++.+++++.|++...
T Consensus        84 ~~~-~~~~---~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~-----~~~~~~~~~~~~k~~~i~G~~~~~  154 (177)
T d1o89a2          84 DEF-AESR---PLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG-----FTLPTTVMPFILRNVRLQGVDSVM  154 (177)
T ss_dssp             GGS-SSCC---SSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTC-----SCCCCCSHHHHHHCCEEEECCSSS
T ss_pred             ccH-HHHH---HHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCC-----ccccccHHHHHHCCCeEEEEeccc
Confidence            764 4332   2223368999999999999999999999999999998653     234456677889999999976543


Q ss_pred             c-ccchHHHHHHHHHHHH
Q 024337          213 H-YHLYPKFLEMIIPHIK  229 (269)
Q Consensus       213 ~-~~~~~~~~~~~~~~~~  229 (269)
                      . +....+.++++.+.+.
T Consensus       155 ~~~~~~~~~~~~L~~~l~  172 (177)
T d1o89a2         155 TPPERRAQAWQRLVADLP  172 (177)
T ss_dssp             CCHHHHHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHHHHHhcc
Confidence            3 3334444555554443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.92  E-value=1.1e-24  Score=162.47  Aligned_cols=168  Identities=14%  Similarity=0.098  Sum_probs=133.4

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      ++|.|+|++.|+|+++.+.++++++++|+|+|+ |++|++++++++..|+ +|+++++++++++.++ ++|+++++|+.+
T Consensus         5 ~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in~~~   82 (175)
T d1cdoa2           5 TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPND   82 (175)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGG
T ss_pred             HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEcCCC
Confidence            588999999999999988899999999999998 9999999999999988 8999999999999999 999999999876


Q ss_pred             hhhHHHHHHHHC-CCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          135 EADLNAALKRYF-PEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       135 ~~~~~~~i~~~~-~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      ..+..+.+.+.+ ++++|+++|++|. ..+..++.+++++|.++.++....     .........++.++.++.|+..++
T Consensus        83 ~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-----~~~~~~~~~~~~~~~~i~Gs~~G~  157 (175)
T d1cdoa2          83 HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-----LHDVATRPIQLIAGRTWKGSMFGG  157 (175)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-----SSCEEECHHHHHTTCEEEECSGGG
T ss_pred             cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-----CcccCccHHHHHCCcEEEEEEEeC
Confidence            423445555555 4499999999997 677888888888755554433221     122234455667788999987765


Q ss_pred             cccchHHHHHHHHHHHHCCC
Q 024337          213 HYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~g~  232 (269)
                      +  ..++++.++++++.+|+
T Consensus       158 ~--~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         158 F--KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             C--CHHHHHHHHHHHHHTTS
T ss_pred             C--cHHHHHHHHHHHHHcCC
Confidence            4  23678889999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=9.8e-25  Score=162.17  Aligned_cols=166  Identities=17%  Similarity=0.161  Sum_probs=130.4

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      .+|.++|++.|+|+++.+.++++++++|+|+|+ |++|++++|+++++|+ +|++++.++++++.++ ++|+++++|+++
T Consensus         6 ~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~   83 (176)
T d1d1ta2           6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECISPKD   83 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEECccc
Confidence            588999999999999978899999999999998 9999999999999997 8999999999999999 999999999876


Q ss_pred             hhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337          135 EADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL  211 (269)
Q Consensus       135 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
                      ..+..+.+.+.+.+ ++|++||++|. ..+..++..+.++ |+++.+|.+..    ......++. .+.++.++.|+..+
T Consensus        84 ~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~----~~~~~~~~~-~~~~~~~i~Gs~~G  158 (176)
T d1d1ta2          84 STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS----AKMLTYDPM-LLFTGRTWKGCVFG  158 (176)
T ss_dssp             CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT----TCCEEECTH-HHHTTCEEEECSGG
T ss_pred             cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc----ccccCCCHH-HHhCCCEEEEEEEe
Confidence            41335555555544 99999999998 6778888877665 99999987542    111222233 34467889988765


Q ss_pred             ccccchHHHHHHHHHHHHC
Q 024337          212 DHYHLYPKFLEMIIPHIKE  230 (269)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~  230 (269)
                      +..  .++++.+++++..+
T Consensus       159 ~~~--~~~dip~li~~~~~  175 (176)
T d1d1ta2         159 GLK--SRDDVPKLVTEFLA  175 (176)
T ss_dssp             GCC--HHHHHHHHHHHHTT
T ss_pred             CCC--cHHHHHHHHHHHhC
Confidence            532  25667777766543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=1.4e-23  Score=158.26  Aligned_cols=168  Identities=18%  Similarity=0.177  Sum_probs=136.2

Q ss_pred             hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337           56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE  134 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~  134 (269)
                      +.++|+..+.|||+++ +.+++++|++|+|+|+ |++|++++++++.+|+ +|++++.+++++++++ ++|+++++++.+
T Consensus         3 d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~   79 (195)
T d1kola2           3 DLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLD   79 (195)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSS
T ss_pred             hHHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCC
Confidence            4688999999999999 5689999999999997 9999999999999999 8999999999999999 999999999888


Q ss_pred             hhhHHHHHHHHCCC-CccEEEeCCCc----------------hhHhhhHhhhhcCCEEEEEeccccccCC-------CCC
Q 024337          135 EADLNAALKRYFPE-GIDVYFENVGG----------------KTLDAVLPNMKIRGRIAACGMISQYNLD-------KPE  190 (269)
Q Consensus       135 ~~~~~~~i~~~~~~-~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~-------~~~  190 (269)
                      . ++.+.+.+.+++ ++|++|||+|.                ..++.+++.++++|+++.+|...+....       ...
T Consensus        80 ~-~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~  158 (195)
T d1kola2          80 T-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGS  158 (195)
T ss_dssp             S-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTC
T ss_pred             c-CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCc
Confidence            7 999999999887 99999999984                4689999999999999999875432100       001


Q ss_pred             CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCC
Q 024337          191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK  232 (269)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  232 (269)
                      ....+..++.++.++.+...     ..+.+++++++++.+++
T Consensus       159 ~~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         159 LSIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             eeeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            12334556677777643221     34566788888887764

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=2e-25  Score=163.90  Aligned_cols=142  Identities=22%  Similarity=0.343  Sum_probs=115.6

Q ss_pred             cchhHHHH---HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHH
Q 024337           63 PGMTAYVG---FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN  139 (269)
Q Consensus        63 ~~~~a~~~---l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~  139 (269)
                      ++.|||.+   |.+.....++++|||+||+|++|.+++|+||.+|++|+++++++++.++++ ++|+++++++++  ...
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~--~~~   80 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED--VYD   80 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH--HCS
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc--hhc
Confidence            45677655   444455677889999999999999999999999999999999999999999 999999988753  222


Q ss_pred             HHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337          140 AALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD  212 (269)
Q Consensus       140 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
                      +.++...++++|++||++|++.+..++++|+++|+++.+|...+     ...+.+...++.+++++.|+....
T Consensus        81 ~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g-----~~~~~~~~~l~~k~~~i~G~~~~~  148 (167)
T d1tt7a2          81 GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG-----GEVPATVYPFILRGVSLLGIDSVY  148 (167)
T ss_dssp             SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC-----SCEEECSHHHHTSCCEEEECCSSS
T ss_pred             hhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCC-----CcccCCHHHHHHCCcEEEEEecCC
Confidence            22333334499999999999999999999999999999998653     344567788999999999976533

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=7.9e-17  Score=100.52  Aligned_cols=70  Identities=26%  Similarity=0.377  Sum_probs=64.0

Q ss_pred             hhhhcCCcchhHHHHHHHh---hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC
Q 024337           56 YTGILGMPGMTAYVGFYEV---CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF  126 (269)
Q Consensus        56 ~~a~l~~~~~~a~~~l~~~---~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~  126 (269)
                      +++++++++.|||.+++..   ...+++++|+|+||+|++|.+++|++|.+|++|+++++++++.++++ ++|+
T Consensus         5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA   77 (77)
T d1o8ca2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA   77 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence            6889999999999887643   45689999999999999999999999999999999999999999999 8884

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.62  E-value=2.1e-16  Score=117.04  Aligned_cols=83  Identities=13%  Similarity=0.108  Sum_probs=73.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|+++++|++||||+..                               |+|+||+++|+++++++ |++++
T Consensus        63 hE~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~  141 (178)
T d1e3ja1          63 HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKL-PDNCN  141 (178)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTTCC
T ss_pred             cccceEEEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeC-CCCCC
Confidence            47889999999999999999999642                               68999999999999999 99855


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCc
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAAS   89 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~   89 (269)
                      .. ++|++++++.|+|+++ +.+++++|++|+|+||.
T Consensus       142 ~~-~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         142 VK-QLVTHSFKLEQTVDAF-EAARKKADNTIKVMISC  176 (178)
T ss_dssp             CG-GGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEEC
T ss_pred             HH-HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEccc
Confidence            54 5788899999999998 57899999999999874

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.5e-16  Score=110.03  Aligned_cols=82  Identities=17%  Similarity=0.245  Sum_probs=74.3

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      -.|++|+|+++|+++++|++||||++.    |+|+||+.+++++++++ |++++.. ++|+++....|+|+++...++..
T Consensus        65 G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~~g~~~  142 (150)
T d1yb5a1          65 GSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKL-PEKLKPV-IGSQYPLEKVAEAHENIIHGSGA  142 (150)
T ss_dssp             CSCEEEEEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEEC-CTTCCCC-EEEEEEGGGHHHHHHHHHHSSCC
T ss_pred             ccceeeeeEeecceeeccccCccccccccccccccccccccccccccc-cCCCCHH-HHHHhhhhhhhehhhheEEcCcc
Confidence            368899999999999999999999876    79999999999999999 9996655 58899999999999998888899


Q ss_pred             CCCEEEEe
Q 024337           79 HGECVFIS   86 (269)
Q Consensus        79 ~~~~vlI~   86 (269)
                      .|+++||+
T Consensus       143 ~G~~vliL  150 (150)
T d1yb5a1         143 TGKMILLL  150 (150)
T ss_dssp             SSEEEEEC
T ss_pred             cCCEEEEC
Confidence            99999984

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.52  E-value=1.6e-14  Score=103.34  Aligned_cols=81  Identities=14%  Similarity=0.109  Sum_probs=68.9

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchh-hhhcCCcchhHHHHHHHhhcC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYY-TGILGMPGMTAYVGFYEVCSA   77 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~-~a~l~~~~~~a~~~l~~~~~~   77 (269)
                      ..|++|+|.++|+++++|++||||+..    |+|+||++++.+.++++ |++++.+.. +++++....++++++.+ .++
T Consensus        61 G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~~-P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~  138 (147)
T d1qora1          61 GTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAIL-PAAIKVDVAEQQKYPLKDAQRAHEILE-SRA  138 (147)
T ss_dssp             CSCEEEEEEEECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEEC-CTTSCCCCCGGGEEEGGGHHHHHHHHH-TTC
T ss_pred             ccccccceeeeeeecccccccceeeeeccccccceeEEEEehHHeEEc-CcccchHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence            368899999999999999999999754    89999999999999999 998665532 45667778888888854 689


Q ss_pred             CCCCEEEE
Q 024337           78 KHGECVFI   85 (269)
Q Consensus        78 ~~~~~vlI   85 (269)
                      ++|++|||
T Consensus       139 ~~G~~VLI  146 (147)
T d1qora1         139 TQGSSLLI  146 (147)
T ss_dssp             CCBCCEEE
T ss_pred             CCCCEEEe
Confidence            99999998

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.48  E-value=3.1e-14  Score=104.32  Aligned_cols=78  Identities=18%  Similarity=0.119  Sum_probs=68.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL   53 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~   53 (269)
                      -|++|+|+++|++++++++||||+..                              |+|+||+.++.++++++ |+++++
T Consensus        63 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~  141 (171)
T d1h2ba1          63 HENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKL-PKDVRV  141 (171)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEEC-CTTCCC
T ss_pred             eeeeeeeecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceec-CCCCCH
Confidence            57889999999999999999999753                              68999999999999999 998554


Q ss_pred             chhhhhcCCcchhHHHHHHHhhcCCCCCEEEE
Q 024337           54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFI   85 (269)
Q Consensus        54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI   85 (269)
                      + .++++++++.|+|+++ +.+.+ .|++|||
T Consensus       142 e-~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         142 E-VDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             C-EEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             H-HHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            3 4778899999999999 55777 8999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.45  E-value=1e-13  Score=104.12  Aligned_cols=81  Identities=19%  Similarity=0.192  Sum_probs=72.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|+++|++++.+++||||+..                                                   |+|
T Consensus        68 hE~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggf  147 (199)
T d1cdoa1          68 HEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTF  147 (199)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCS
T ss_pred             cccceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCc
Confidence            57889999999999999999999543                                                   689


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFIS   86 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~   86 (269)
                      +||++++.++++++ |++++.+ ++|++.+++.|++.++....+.+.+++|||+
T Consensus       148 aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         148 SQYTVVNQIAVAKI-DPSVKLD-EFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             BSEEEEEGGGEEEC-CTTSCCG-GGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             eEEEEEchHHEEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999 9986554 6889999999999999887888999999984

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.40  E-value=2.3e-13  Score=97.61  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=66.4

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHH
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE   73 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~   73 (269)
                      ..|++|+|.+  ++++.+++||+|+..         |+|+||+.+|+++++++ |++  ++.++|++++++.|+|.++..
T Consensus        65 g~e~~G~v~~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~i-P~~--l~~~aa~l~~a~~ta~~~~~~  139 (152)
T d1xa0a1          65 GIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPL-PKG--LERIAQEISLAELPQALKRIL  139 (152)
T ss_dssp             CSEEEEEEEE--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEEC-CTT--HHHHEEEEEGGGHHHHHHHHH
T ss_pred             eeeeeeeeec--cCCCccccCCEEEEecCccccccCCCcceeeeehhhccccC-CCC--CCHHHHHHHHHHHHHHHHHHH
Confidence            3566666655  667789999999866         79999999999999999 998  555688999999999999878


Q ss_pred             hhcCCCCCEEEEec
Q 024337           74 VCSAKHGECVFISA   87 (269)
Q Consensus        74 ~~~~~~~~~vlI~g   87 (269)
                      .++++ |++|||+|
T Consensus       140 ~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         140 RGELR-GRTVVRLA  152 (152)
T ss_dssp             HTCCC-SEEEEECC
T ss_pred             hcCCC-CCEEEEcC
Confidence            78875 99999975

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=9e-13  Score=97.69  Aligned_cols=81  Identities=16%  Similarity=0.151  Sum_probs=65.1

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDV   51 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~   51 (269)
                      .-|++|+|+++|+++++|++||+|+..                               |+|+||++++.++++++ |+++
T Consensus        68 GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~l-P~~~  146 (185)
T d1pl8a1          68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKL-PDNV  146 (185)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTTC
T ss_pred             eeeeeeeEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEEC-CCCC
Confidence            357889999999999999999999642                               57999999999999999 9984


Q ss_pred             CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecC
Q 024337           52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAA   88 (269)
Q Consensus        52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga   88 (269)
                        +++.|+ ..++.++++++ +..++++|++|+|..+
T Consensus       147 --~~~~aa-~~pl~~a~~a~-~~~~~~~G~~VlIg~G  179 (185)
T d1pl8a1         147 --KPLVTH-RFPLEKALEAF-ETFKKGLGLKIMLKCD  179 (185)
T ss_dssp             --GGGEEE-EEEGGGHHHHH-HHHHTTCCSEEEEECC
T ss_pred             --CHHHHH-HHHHHHHHHHH-HHhCCCCCCEEEEEeC
Confidence              434333 24567788888 5678999999999433

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.35  E-value=3.4e-15  Score=110.29  Aligned_cols=91  Identities=14%  Similarity=0.065  Sum_probs=77.9

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHH-hhcCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE-VCSAK   78 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~-~~~~~   78 (269)
                      .+++|+|.++|.++..++.||+|+..    |+|+||+++++++++++ |+.  ++ ..++++..+.|||+++.. ..+++
T Consensus        78 ~e~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~i-P~~--~~-~~~a~~~~~~ta~~~l~~~~~~~~  153 (175)
T d1gu7a1          78 NEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL-PNP--AQ-SKANGKPNGLTDAKSIETLYDGTK  153 (175)
T ss_dssp             SCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEE-CCH--HH-HHHTTCSCCCCCCCCEEEECCSSS
T ss_pred             cccccccccccccccccccccceeccccccccccceeeehhhhccCC-Ccc--ch-hhhhccchHHHHHHHHHHHhcCCC
Confidence            68899999999999999999999865    79999999999999999 887  55 455566788899998854 36799


Q ss_pred             CCCEEEEec-CcchHHHHHHH
Q 024337           79 HGECVFISA-ASGAVGQLVGQ   98 (269)
Q Consensus        79 ~~~~vlI~g-a~g~vG~~~i~   98 (269)
                      ++++|+|.| |+|++|++++|
T Consensus       154 ~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         154 PLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             CHHHHHHHHHHTGGGSCEEEE
T ss_pred             CCCEEEEECccchhhhheEEe
Confidence            999999998 55789988776

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.34  E-value=1.3e-12  Score=95.99  Aligned_cols=80  Identities=18%  Similarity=0.088  Sum_probs=65.8

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDV   51 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~   51 (269)
                      .-|++|+|+++|++++++++||||+..                               |+|+||+++++++++++ |+++
T Consensus        65 GhE~~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~i-Pd~l  143 (175)
T d1llua1          65 GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGIL-PKNV  143 (175)
T ss_dssp             CSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEEC-CTTC
T ss_pred             CCcceEEEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEEC-CCCC
Confidence            358899999999999999999999642                               58999999999999999 9985


Q ss_pred             CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEe
Q 024337           52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFIS   86 (269)
Q Consensus        52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~   86 (269)
                      +.. .++++.+++.++++.+ +.+ ..+|++|||+
T Consensus       144 ~~~-~a~~~~~~~~t~~~~~-~~g-~~~G~~VLVl  175 (175)
T d1llua1         144 KAT-IHPGKLDDINQILDQM-RAG-QIEGRIVLEM  175 (175)
T ss_dssp             CCC-EEEECGGGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred             Chh-HHHHHHhHHHHHHHHH-HhC-CCCCCEEEeC
Confidence            533 3666778888888887 434 4579999984

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.32  E-value=1.6e-12  Score=95.27  Aligned_cols=79  Identities=19%  Similarity=0.205  Sum_probs=63.5

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP   52 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~   52 (269)
                      -|++|+|+++|++++.+++||+|+..                               |+|+||+++++++++++ |++++
T Consensus        61 hE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~  139 (171)
T d1rjwa1          61 HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKI-PDNTI  139 (171)
T ss_dssp             SCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEEC-CTTCC
T ss_pred             CEEEEEEEEecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEEC-CCCCC
Confidence            58899999999999999999999631                               68999999999999999 99854


Q ss_pred             cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecC
Q 024337           53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAA   88 (269)
Q Consensus        53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga   88 (269)
                        +++|+|. +..++++.+. .+.+ +|++|||+|-
T Consensus       140 --~e~A~l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         140 --IEVQPLE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             --EEEEEGG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             --HHHHHHH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence              4556663 4566776663 3555 5999999984

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=9.7e-13  Score=97.76  Aligned_cols=79  Identities=14%  Similarity=0.081  Sum_probs=65.7

Q ss_pred             cccceEEEEeccCC-CCCCCCCeEEec--------------------------------------cceeeEEEecCCcee
Q 024337            4 ISGYGVAKVLDSEN-PEFSKGDLVWGM--------------------------------------TGWEEYSLITAPYLF   44 (269)
Q Consensus         4 i~~~G~v~~vg~~v-~~~~~Gd~V~~~--------------------------------------g~~~~~~~v~~~~~~   44 (269)
                      -|++|+|+++|+++ +.+++||||...                                      |+|+||+++++++++
T Consensus        68 HE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~  147 (192)
T d1piwa1          68 HEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVV  147 (192)
T ss_dssp             CCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEE
T ss_pred             cccccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeE
Confidence            57889999999998 569999999411                                      689999999999999


Q ss_pred             ecCCCCCCcchhhhhcCCc-chhHHHHHHHhhcCCCCCEEEEe
Q 024337           45 KIQHTDVPLSYYTGILGMP-GMTAYVGFYEVCSAKHGECVFIS   86 (269)
Q Consensus        45 ~~~p~~~~~~~~~a~l~~~-~~~a~~~l~~~~~~~~~~~vlI~   86 (269)
                      ++ |++++.  +.|++.++ +.+||+++ +.++++++++|+|.
T Consensus       148 ~i-P~~l~~--e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         148 PI-PENIWV--ETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             EC-CTTCCE--EEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             EC-CCCCCH--HHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            99 999544  55666665 56999999 57899999999985

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.27  E-value=4.7e-15  Score=111.34  Aligned_cols=94  Identities=18%  Similarity=0.072  Sum_probs=73.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------------------------cceeeEEEecCC--
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------TGWEEYSLITAP--   41 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~--   41 (269)
                      -|++|+|+++|++|++|++||||...                                        |+|+||+++|..  
T Consensus        66 HE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~  145 (201)
T d1kola1          66 HEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADF  145 (201)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHH
T ss_pred             ceeeeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHC
Confidence            36689999999999999999999521                                        689999999864  


Q ss_pred             ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC
Q 024337           42 YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC  105 (269)
Q Consensus        42 ~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~  105 (269)
                      +++++ |++. ++.+++++.+++.++++++. ..+.+.++    +|+ |++|++++|.||.+|+
T Consensus       146 ~l~~i-Pd~~-~~~~~~~~~~~~~~~~~a~~-~~~~~~g~----~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         146 NLLKL-PDRD-KAMEKINIAEVVGVQVISLD-DAPRGYGE----FDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HCEEC-SCHH-HHHHTCCHHHHHTEEEECGG-GHHHHHHH----HHH-TCSCEEEECTTCSSCC
T ss_pred             eEEEC-CCCC-ChHHHHHHHHHHHHHHHHHH-hCCCCCeE----Eee-CHHHHHHHHHHHHcCC
Confidence            79999 8752 33356778888888888874 34444443    465 9999999999999886

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.26  E-value=6.4e-12  Score=93.79  Aligned_cols=82  Identities=16%  Similarity=0.136  Sum_probs=69.6

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cc
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TG   31 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~   31 (269)
                      .-|++|+|.++|++|+.+++||+|+..                                                   |+
T Consensus        65 GhE~~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~Gg  144 (197)
T d2fzwa1          65 GHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTST  144 (197)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCC
T ss_pred             CcceeeEEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceeccccccc
Confidence            357899999999999999999999642                                                   58


Q ss_pred             eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEe
Q 024337           32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFIS   86 (269)
Q Consensus        32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~   86 (269)
                      |+||+++++.+++++ |++++.+ ++|++.+++.+++.++.....-+.+++|+|+
T Consensus       145 fAey~vvp~~~~~~v-p~~l~~~-~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         145 FSEYTVVADISVAKI-DPLIKVD-EFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             SBSEEEEEGGGEEEC-CTTSCSG-GGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             ceeEEEechHHEEEC-CCCCCHH-HHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999 8886655 5788999999999999655555678888874

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.20  E-value=2.5e-11  Score=90.27  Aligned_cols=78  Identities=19%  Similarity=0.208  Sum_probs=60.4

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec----------------------------------------------------cc
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------------------TG   31 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~   31 (269)
                      -|++|+|+++|++|+++++||||+..                                                    |+
T Consensus        62 HE~~G~V~~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~  141 (194)
T d1f8fa1          62 HEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSS  141 (194)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCC
T ss_pred             cceEEEeeecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccc
Confidence            47889999999999999999999641                                                    46


Q ss_pred             eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEE
Q 024337           32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVG  109 (269)
Q Consensus        32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~  109 (269)
                      |+||++++..+++++ |++++..                          +.+++.| +|++|++++|+++.+|+..++
T Consensus       142 fae~~~v~~~~~~~i-p~~i~~~--------------------------~~~~i~g-~g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         142 FATYALSRENNTVKV-TKDFPFD--------------------------QLVKFYA-FDEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             SBSEEEEEGGGEEEE-CTTCCGG--------------------------GGEEEEE-GGGHHHHHHHHHHTSCSEEEE
T ss_pred             cceeEEEehHHEEEC-CCCCCcc--------------------------cEEEEeC-cHHHHHHHHHHHHHcCCCEEE
Confidence            788888888888888 7763322                          2234445 499999999999999995443

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.17  E-value=1e-11  Score=86.19  Aligned_cols=71  Identities=17%  Similarity=0.173  Sum_probs=58.2

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG   80 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~   80 (269)
                      ++|+..+++|        +||+|+++   |+|+||+.++++.++++ |++++.. ++|++++.+.|||++|.+.+  +.+
T Consensus        58 v~G~E~~G~V--------vGd~V~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~~~~~~~Ta~~al~~~g--~~g  125 (131)
T d1iz0a1          58 IPGMEVVGVV--------EGRRYAALVPQGGLAERVAVPKGALLPL-PEGRPVV-GPVFPFAEAEAAFRALLDRG--HTG  125 (131)
T ss_dssp             CCCCEEEEEE--------TTEEEEEECSSCCSBSEEEEEGGGCEEC-CTTCCCE-EEEEEGGGHHHHHHHTTCTT--CCB
T ss_pred             EeeeeeEEee--------ccceEEEEeccCccceeeeeCHHHeEEc-cCCCCHH-HHHHHHHHHHHHHHHHHhcc--cCC
Confidence            4555555555        49999988   89999999999999999 9986555 58889999999999997765  459


Q ss_pred             CEEEEe
Q 024337           81 ECVFIS   86 (269)
Q Consensus        81 ~~vlI~   86 (269)
                      ++||++
T Consensus       126 ~tvl~l  131 (131)
T d1iz0a1         126 KVVVRL  131 (131)
T ss_dssp             EEEEEC
T ss_pred             CEEEEC
Confidence            998874

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.15  E-value=2e-11  Score=91.67  Aligned_cols=79  Identities=14%  Similarity=0.232  Sum_probs=65.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec------------------------------------------------------
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------------------------------   29 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------------------------------   29 (269)
                      -|++|+|+++|++|+++++||+|++.                                                      
T Consensus        67 HE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~  146 (202)
T d1e3ia1          67 HECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMG  146 (202)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTT
T ss_pred             cccceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccc
Confidence            57888999999999999999999642                                                      


Q ss_pred             -cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEec
Q 024337           30 -TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISA   87 (269)
Q Consensus        30 -g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~g   87 (269)
                       |+|+||+++++..++++ |++++.+ .++++.+++.+++.++.   .+++|++|.|..
T Consensus       147 ~G~faey~~v~~~~l~~l-P~~~~~~-~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~  200 (202)
T d1e3ia1         147 VSSFSQYTVVSEANLARV-DDEFDLD-LLVTHALPFESINDAID---LMKEGKSIRTIL  200 (202)
T ss_dssp             TCCSBSEEEEEGGGEEEC-CTTSCGG-GGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred             cCCceEEEEEehhhEEEC-CCCCCHH-HHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence             57999999999999999 9986554 46788888888888873   256788887753

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.13  E-value=6e-13  Score=96.49  Aligned_cols=83  Identities=18%  Similarity=0.252  Sum_probs=66.4

Q ss_pred             ccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337            5 SGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC   75 (269)
Q Consensus         5 ~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~   75 (269)
                      +++|+|.+  +.++.+++||+|+..         |+|+||+++|+++++++ |++++.. +||+++..+.|+|.++.. .
T Consensus        67 e~~G~v~~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~-~  141 (162)
T d1tt7a1          67 DAAGTVVS--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPL-PQNLSLK-EAMVDQLLTIVDREVSLE-E  141 (162)
T ss_dssp             EEEEEEEE--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEEC-CTTCCHH-HHHHSCSTTSEEEEECST-T
T ss_pred             eccccccc--ccccccccceeeEeeeccceeccccccceEEEecHHHEEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh-c
Confidence            44555444  667789999999865         79999999999999999 9996555 588999999999988743 4


Q ss_pred             cCCCCCEEEEecCcchH
Q 024337           76 SAKHGECVFISAASGAV   92 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~v   92 (269)
                      +...+++|||+|++|++
T Consensus       142 ~~~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1         142 TPGALKDILQNRIQGRV  158 (162)
T ss_dssp             HHHHHHHTTTTCCSSEE
T ss_pred             CCCCCCEEEEECCcceE
Confidence            55667889999987764

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.06  E-value=1.7e-10  Score=84.68  Aligned_cols=78  Identities=23%  Similarity=0.200  Sum_probs=59.8

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCc-eeecCCCCC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPY-LFKIQHTDV   51 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~-~~~~~p~~~   51 (269)
                      --|++|+|+++|++++++++||+|+..                              |+|+||++++.+. ++++ |+. 
T Consensus        67 GhE~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~-~~~-  144 (177)
T d1jvba1          67 GHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRV-  144 (177)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSS-
T ss_pred             cceEEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEEC-CCC-
Confidence            357889999999999999999999643                              6899999998765 5555 664 


Q ss_pred             Ccchhhh-hcCCcchhHHHHHHHhhcCCCCCEEEE
Q 024337           52 PLSYYTG-ILGMPGMTAYVGFYEVCSAKHGECVFI   85 (269)
Q Consensus        52 ~~~~~~a-~l~~~~~~a~~~l~~~~~~~~~~~vlI   85 (269)
                       .+.++| .+..++.++++++ +.+++ .|++|||
T Consensus       145 -~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         145 -KPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             -CCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             -ChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence             222444 4457888999998 55666 5889987

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.05  E-value=3.2e-10  Score=79.86  Aligned_cols=80  Identities=28%  Similarity=0.466  Sum_probs=62.2

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCC---cch-hhhhcCCcchhH-HHHHHHhhcC
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVP---LSY-YTGILGMPGMTA-YVGFYEVCSA   77 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~---~~~-~~a~l~~~~~~a-~~~l~~~~~~   77 (269)
                      +|+|.|+.+.+.|+.+.|++||+|++.++|+||.+++.+.+.++ |..++   .+. ..+++...++|| |..+.  ..-
T Consensus        62 ~~~g~~vg~Vv~S~~~~f~~GD~V~g~~gw~ey~v~~~~~l~kv-~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~  138 (147)
T d1v3va1          62 VMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKL-LTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGA  138 (147)
T ss_dssp             BCCCCEEEEEEEESCTTSCTTCEEEECCCSBSEEEECSSSCEEC-CTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTC
T ss_pred             ccccceEEEEEEeCCCcccCCCEEEEccCCEeEEEeccceeeEc-cccccccccchhhhHhccccchHHHHHHhh--CCC
Confidence            57888888888999999999999999999999999999999999 54322   111 245677788875 54553  345


Q ss_pred             CCCCEEEE
Q 024337           78 KHGECVFI   85 (269)
Q Consensus        78 ~~~~~vlI   85 (269)
                      +.|++|++
T Consensus       139 k~Getvv~  146 (147)
T d1v3va1         139 NLGKAVVT  146 (147)
T ss_dssp             CSSEEEEE
T ss_pred             CCCCEEEe
Confidence            67999986

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.01  E-value=2.3e-10  Score=80.87  Aligned_cols=65  Identities=15%  Similarity=0.198  Sum_probs=54.2

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHH
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGF   71 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l   71 (269)
                      ..|++|+|+++|.  ..+++||+|+..         |+|+||+.+|.++++++ |+++++. ++|++++++.||+.++
T Consensus        62 G~e~~G~V~~~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~l-P~~ls~~-eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          62 GIDFAGTVRTSED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAM-PQGQAAK-EISLSEAPNFAEAIIN  135 (146)
T ss_dssp             CSEEEEEEEEECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEEC-CTTSCCE-EECGGGHHHHHHHHHT
T ss_pred             cccccccceeecc--CCccceeeEEeecccceecCCCcceeeeeeeeeeEEEC-CCCCCHH-HHHHHHHHHHHHHHHH
Confidence            3577888888765  479999999864         89999999999999999 9996665 6889998888887665

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.99  E-value=4.3e-10  Score=82.52  Aligned_cols=75  Identities=15%  Similarity=0.209  Sum_probs=59.4

Q ss_pred             cccceEEEEeccCCC-----CCCCCCeEEe---------------------------------------ccceeeEEEec
Q 024337            4 ISGYGVAKVLDSENP-----EFSKGDLVWG---------------------------------------MTGWEEYSLIT   39 (269)
Q Consensus         4 i~~~G~v~~vg~~v~-----~~~~Gd~V~~---------------------------------------~g~~~~~~~v~   39 (269)
                      -|++|+|+++|++|+     .+++||+|+.                                       .|+|+||++++
T Consensus        64 HE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~  143 (184)
T d1vj0a1          64 HEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLD  143 (184)
T ss_dssp             CEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEEC
T ss_pred             eeeeeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEec
Confidence            467889999999886     4689999963                                       16899999996


Q ss_pred             -CCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEec
Q 024337           40 -APYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISA   87 (269)
Q Consensus        40 -~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~g   87 (269)
                       +++++++ |++++..       .++.+|++++ +.+++++|++|+|+-
T Consensus       144 ~~~~v~~i-p~~l~~~-------~pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         144 PETDVLKV-SEKITHR-------LPLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             TTCCEEEE-CTTCCEE-------EEGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             hhHcEEEC-CCCCCHH-------HHHHHHHHHH-HHhCCCcCCEEEEee
Confidence             5799999 8885432       2456788888 668999999999973

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=98.85  E-value=1.3e-09  Score=81.18  Aligned_cols=78  Identities=15%  Similarity=0.175  Sum_probs=57.3

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      -|++|+|.++|++++++++||+|+..                                                   |+|
T Consensus        67 HE~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~f  146 (198)
T d2jhfa1          67 HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTF  146 (198)
T ss_dssp             CSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCS
T ss_pred             cceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcc
Confidence            47889999999999999999999542                                                   579


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEe
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFIS   86 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~   86 (269)
                      +||+++++.+++++ |+.++++ .+++...++......   ...+++|++|+|.
T Consensus       147 AEy~~v~~~~~~~~-p~~~~~e-~l~~~~~~~~~v~~g---~~~l~~G~~VaVi  195 (198)
T d2jhfa1         147 SQYTVVDEISVAKI-DAAFALD-PLITHVLPFEKINEG---FDLLRSGESIRTI  195 (198)
T ss_dssp             BSEEEEEGGGEEEC-CTTSCCG-GGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred             cCeEEeCHHHeEEC-CCCCCHH-HHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence            99999999999999 8876554 333333333332222   1346788888775

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=98.72  E-value=1.1e-08  Score=74.64  Aligned_cols=70  Identities=17%  Similarity=0.141  Sum_probs=52.6

Q ss_pred             CcccceEEEEeccCCCCCCCCCeEEec---------------------------------------cceeeEEEecCCce
Q 024337            3 PISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------TGWEEYSLITAPYL   43 (269)
Q Consensus         3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------g~~~~~~~v~~~~~   43 (269)
                      .-|++|+|+++|++|+++++||+|...                                       |+|+||+.++++++
T Consensus        59 GhE~~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~  138 (179)
T d1uufa1          59 GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYV  138 (179)
T ss_dssp             CCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGC
T ss_pred             cccccccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHE
Confidence            357889999999999999999999421                                       68999999999999


Q ss_pred             eecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337           44 FKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK   78 (269)
Q Consensus        44 ~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~   78 (269)
                      +++ |+.  ..  .+.+..++.++++++ ..+.++
T Consensus       139 ~~i-p~~--~~--~~~~a~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         139 LRI-RVA--DI--EMIRADQINEAYERM-LRGDVK  167 (179)
T ss_dssp             EEC-CCC--CE--EEECGGGHHHHHHHH-HTTCSS
T ss_pred             EEC-CCC--Cc--ChhHhchhHHHHHHH-HHhCcc
Confidence            999 653  22  223334667888888 345443

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=98.71  E-value=5.7e-09  Score=75.97  Aligned_cols=49  Identities=27%  Similarity=0.259  Sum_probs=41.6

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------cceeeEEEecCC--ceeecCC
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------TGWEEYSLITAP--YLFKIQH   48 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~--~~~~~~p   48 (269)
                      -|++|+|+++|+++++|++||||...                                 |+|+||+++|..  +++++ |
T Consensus        59 hE~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~i-P  137 (177)
T d1jqba1          59 HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAIL-P  137 (177)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEEC-C
T ss_pred             ceeeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEEC-C
Confidence            47889999999999999999999631                                 789999999863  78999 8


Q ss_pred             CCCCc
Q 024337           49 TDVPL   53 (269)
Q Consensus        49 ~~~~~   53 (269)
                      ++++.
T Consensus       138 ~~~~~  142 (177)
T d1jqba1         138 KDVDL  142 (177)
T ss_dssp             TTSCG
T ss_pred             CCcch
Confidence            88543

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=98.69  E-value=2.2e-09  Score=79.85  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=56.8

Q ss_pred             cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337            4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW   32 (269)
Q Consensus         4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~   32 (269)
                      =|++|+|+++|++++.+++||+|+..                                                   |+|
T Consensus        67 HE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~f  146 (198)
T d1p0fa1          67 HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTF  146 (198)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCS
T ss_pred             eeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccc
Confidence            47789999999999999999999642                                                   468


Q ss_pred             eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHH
Q 024337           33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQL   95 (269)
Q Consensus        33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~   95 (269)
                      +||+.+++..++++ |++++.+ ..++..+..          ..+.+++.|+|.|+ |++|++
T Consensus       147 aey~~v~~~~~~ki-p~~~~~~-~~~~~~~~~----------~~v~~~~~vlv~G~-G~iGl~  196 (198)
T d1p0fa1         147 TEYTVVADIAVAKI-DPKINVN-FLVSTKLTL----------DQINKAFELLSSGQ-GVRSIM  196 (198)
T ss_dssp             BSEEEEETTSEEEE-CTTSCGG-GGEEEEECG----------GGHHHHHHHTTTSS-CSEEEE
T ss_pred             eeeEEecHHHEEEC-CCCCCHH-HHHHhhcch----------hhcCCCCEEEEECC-CcceEE
Confidence            99999999999999 8775544 222222222          22334455778886 777753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=9.8e-08  Score=73.11  Aligned_cols=105  Identities=22%  Similarity=0.374  Sum_probs=76.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~v  153 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.++++..   ...|..+..+..+.+.+..  -+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5889999999999999999999999999999999999988877677653   2345555423333333322  1479999


Q ss_pred             EeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          154 FENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++++|..   .                       .+.+++.|.+  +|++|.++....
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            9999741   0                       3556666643  689999986554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.57  E-value=6.4e-07  Score=63.24  Aligned_cols=101  Identities=17%  Similarity=0.162  Sum_probs=77.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +..+|+|+|+ |-.|+.+++.|+.+|++|.+.+.+.++++.++..++... ....++. .+.+.+++     .|+||.++
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~-~l~~~~~~-----aDivI~aa  103 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA-EIETAVAE-----ADLLIGAV  103 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH-HHHHHHHT-----CSEEEECC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhh-hHHHhhcc-----CcEEEEee
Confidence            4578999999 999999999999999999999999999999984444432 3322222 55555553     89999987


Q ss_pred             C---c----hhHhhhHhhhhcCCEEEEEeccccccC
Q 024337          158 G---G----KTLDAVLPNMKIRGRIAACGMISQYNL  186 (269)
Q Consensus       158 g---~----~~~~~~~~~l~~~G~~v~~g~~~~~~~  186 (269)
                      =   .    -.-++.++.|++++.+|.+....+-++
T Consensus       104 lipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~  139 (168)
T d1pjca1         104 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCV  139 (168)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSB
T ss_pred             ecCCcccCeeecHHHHhhcCCCcEEEEeecCCCCcc
Confidence            3   2    134789999999999999876554433

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.56  E-value=2.6e-07  Score=71.12  Aligned_cols=105  Identities=19%  Similarity=0.211  Sum_probs=75.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            68999999999999999999999999999999999998887766776432   3455554233333333221  379999


Q ss_pred             EeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          154 FENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++++|..   .                       .+.+++.|+.  +|++|.++....
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~  141 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence            9999841   0                       2445555443  699999987654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.56  E-value=2.7e-07  Score=71.00  Aligned_cols=105  Identities=19%  Similarity=0.188  Sum_probs=76.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee---EecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA---FNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~---~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.++++....   .|..+..+..+.+.+...  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            689999999999999999999999999999999999998887768876432   344443122222222221  479999


Q ss_pred             EeCCCch---h-----------------------HhhhHhhhhc-CCEEEEEecccc
Q 024337          154 FENVGGK---T-----------------------LDAVLPNMKI-RGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~---~-----------------------~~~~~~~l~~-~G~~v~~g~~~~  183 (269)
                      ++++|..   .                       .+.+++.|+. +|++|.++....
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9999841   0                       3456666654 799999887654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=3.5e-07  Score=70.18  Aligned_cols=105  Identities=14%  Similarity=0.192  Sum_probs=75.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~~d~vi  154 (269)
                      +|++++|+||++++|.++++.+...|++|+++++++++.+.+.++++...  ..|..+..+..+.+.+...  +++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            58999999999999999999999999999999999999888875665432  3455554233333333222  4799999


Q ss_pred             eCCCc-h---h-----------------------HhhhHhhhhc-CCEEEEEecccc
Q 024337          155 ENVGG-K---T-----------------------LDAVLPNMKI-RGRIAACGMISQ  183 (269)
Q Consensus       155 d~~g~-~---~-----------------------~~~~~~~l~~-~G~~v~~g~~~~  183 (269)
                      +++|. .   .                       .+.+++.|++ +|+++.++....
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            99983 1   1                       2445666655 689999876554

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.55  E-value=2.9e-07  Score=70.63  Aligned_cols=105  Identities=13%  Similarity=0.144  Sum_probs=76.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCC--CCccEEE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFP--EGIDVYF  154 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vi  154 (269)
                      -+|+++||+||++|+|.++++.+...|++|++++++++..+.++ +.+... ..|..+..+..+.+.+...  +++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            36899999999999999999999999999999999988877777 777643 3455554232333333221  4799999


Q ss_pred             eCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          155 ENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       155 d~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      +++|..   .                       .+.+++.|++  +|++|.++....
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            999841   0                       3456667755  589999877554

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.52  E-value=2.1e-07  Score=71.13  Aligned_cols=81  Identities=12%  Similarity=0.175  Sum_probs=62.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFP--EGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid  155 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.++++... ..|..+.++..+.+.+...  +++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            58999999999999999999999999999999999999888876777643 4565554233333333221  37999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      ++|.
T Consensus        84 nAG~   87 (242)
T d1ulsa_          84 YAGI   87 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9984

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.46  E-value=6.7e-07  Score=69.09  Aligned_cols=105  Identities=18%  Similarity=0.274  Sum_probs=73.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.+++   |...   ..|..+..+..+.+.+...  +++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999999998877665443   3321   3455554233333333221  479


Q ss_pred             cEEEeCCCc--h--h-----------------------HhhhHhhh--hcCCEEEEEecccc
Q 024337          151 DVYFENVGG--K--T-----------------------LDAVLPNM--KIRGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~--~--~-----------------------~~~~~~~l--~~~G~~v~~g~~~~  183 (269)
                      |++++++|.  .  .                       .+.+++.|  +.+|++|.++....
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  145 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG  145 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh
Confidence            999999884  1  1                       24455555  34799999977554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.43  E-value=1.3e-06  Score=67.00  Aligned_cols=104  Identities=14%  Similarity=0.233  Sum_probs=72.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN----KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.+    +.|...   ..|..+..+..+.+.+...  ++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58899999999999999999999999999999999887654332    445432   3455554233333333221  37


Q ss_pred             ccEEEeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEeccc
Q 024337          150 IDVYFENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~  182 (269)
                      +|++++++|..   .                       .+.+++.|++  +|++|.++...
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~  144 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT  144 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence            99999999841   0                       3556677754  58999987643

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=6.6e-07  Score=68.36  Aligned_cols=105  Identities=21%  Similarity=0.244  Sum_probs=73.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .|++++|+||++|+|...+..+...|++|+.+++++++.+.+.++   .|..   ...|.++.++....++...  -+++
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999999987765433   3332   2445555423333333222  2379


Q ss_pred             cEEEeCCCchh--------------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          151 DVYFENVGGKT--------------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      |++++++|...                          .+.+++.|.+  .|++|.++...+
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            99999998511                          2446666655  578988876543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.42  E-value=9.6e-07  Score=68.10  Aligned_cols=105  Identities=15%  Similarity=0.263  Sum_probs=71.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHH---HHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAA---LKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~---i~~~~~~~  149 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.+++   +..   ...|..+..+..+.   +.+..++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998877654343   222   23455554222222   33333457


Q ss_pred             ccEEEeCCCchh--------------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          150 IDVYFENVGGKT--------------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       150 ~d~vid~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      +|++++++|...                          .+.+++.|++  +|+++.++....
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            999999998410                          2445555543  689999876554

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.42  E-value=1.2e-06  Score=66.70  Aligned_cols=103  Identities=9%  Similarity=0.118  Sum_probs=75.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      +|++++|+||++++|.++++-+...|++|+.+++++++.+.+.++++...   ..|.+++++..+.+.+...  +++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            68999999999999999999999999999999999998887776887643   2355554233333333322  379999


Q ss_pred             EeCCCchh--------------------------HhhhHhhhhcCCEEEEEecc
Q 024337          154 FENVGGKT--------------------------LDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       154 id~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ++++|...                          .+..+..+..++.++.++..
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~  137 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV  137 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence            99987411                          24456667777777766553

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1e-06  Score=67.34  Aligned_cols=79  Identities=16%  Similarity=0.160  Sum_probs=61.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.++++...  ..|..+. +..+.+.+.. +++|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~-g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSV-GPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHh-CCceEEEec
Confidence            68999999999999999999999999999999999999887765665432  4565554 3333333222 379999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        84 Ag~   86 (244)
T d1pr9a_          84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            984

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.41  E-value=5.6e-07  Score=68.76  Aligned_cols=105  Identities=20%  Similarity=0.223  Sum_probs=75.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.++++-..   ..|..+..+..+.+++...  +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            68999999999999999999999999999999999999887776776432   2455554233333333322  379999


Q ss_pred             EeCCCchh--------------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          154 FENVGGKT--------------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++++|...                          .+.+++.|..  +|++|.++....
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  142 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG  142 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence            99998510                          2345555543  689999987654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1e-06  Score=67.83  Aligned_cols=81  Identities=22%  Similarity=0.389  Sum_probs=58.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-ce----eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-DE----AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~-~~----~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.+++   +. ..    ..|..++++..+.+.+...  +
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998877654333   32 12    2355554233333333221  4


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++++++|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999999985

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.40  E-value=1.1e-06  Score=64.59  Aligned_cols=78  Identities=17%  Similarity=0.145  Sum_probs=58.9

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----C-ceeEecCChhhHHHHHHHHCCCCcc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----F-DEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g----~-~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      --+|++++|+||+|++|..+++.+...|++|+.++|+.++.+.+.+++.    . ....|..+. +   .+++.. +++|
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~---~~~~~~-~~iD   94 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-A---SRAEAV-KGAH   94 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-H---HHHHHT-TTCS
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH-H---HHHHHh-cCcC
Confidence            4489999999999999999999999999999999999998876654442    2 224555443 2   233333 3599


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++|+++|.
T Consensus        95 ilin~Ag~  102 (191)
T d1luaa1          95 FVFTAGAI  102 (191)
T ss_dssp             EEEECCCT
T ss_pred             eeeecCcc
Confidence            99999884

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.39  E-value=5.7e-07  Score=69.31  Aligned_cols=81  Identities=14%  Similarity=0.228  Sum_probs=62.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.++++...   ..|..+..+..+.+.+...  +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            58899999999999999999999999999999999999887776887643   3455554233333333221  479999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      ++++|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999984

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.38  E-value=1.5e-06  Score=66.30  Aligned_cols=79  Identities=14%  Similarity=0.101  Sum_probs=60.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+.++++...  ..|..+. +..+.+.+.. +++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~-g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALGGI-GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHc-CCCeEEEEC
Confidence            58999999999999999999999999999999999998877765665432  3455554 3333332222 479999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        82 Ag~   84 (242)
T d1cyda_          82 AAL   84 (242)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            984

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.37  E-value=6.7e-07  Score=69.70  Aligned_cols=80  Identities=21%  Similarity=0.259  Sum_probs=60.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v  153 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.++++...   ..|..+.++..+.+.+...  +++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            58999999999999999999999999999999999999887776776532   3355554223333332221  379999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      ++++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99987

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.37  E-value=1.1e-06  Score=67.50  Aligned_cols=105  Identities=14%  Similarity=0.295  Sum_probs=72.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF--PEGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~--~~~~  150 (269)
                      .++.++|+||++|+|.++++.+...|++|+++++++++.+.+.++   .|..   ...|..+..+..+.+.+..  -+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            478999999999999999999999999999999999887665433   3432   2345555423333333321  2479


Q ss_pred             cEEEeCCCchh--------------------------HhhhHhhhh--cCCEEEEEecccc
Q 024337          151 DVYFENVGGKT--------------------------LDAVLPNMK--IRGRIAACGMISQ  183 (269)
Q Consensus       151 d~vid~~g~~~--------------------------~~~~~~~l~--~~G~~v~~g~~~~  183 (269)
                      |++++++|...                          .+.+++.|.  .+|++|.++...+
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  149 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG  149 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence            99999988410                          244555554  3699999986554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=5.3e-07  Score=70.27  Aligned_cols=101  Identities=21%  Similarity=0.352  Sum_probs=69.1

Q ss_pred             CCEE-EEecCcchHHHHHHHHH-HHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhh---HHHHHHHHCCC
Q 024337           80 GECV-FISAASGAVGQLVGQFA-KLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEAD---LNAALKRYFPE  148 (269)
Q Consensus        80 ~~~v-lI~ga~g~vG~~~i~~a-~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~---~~~~i~~~~~~  148 (269)
                      |.+| ||+||++|+|+++++.+ +..|++|+.++|++++.+.+.+++   +.. .  ..|..+..+   +.+.+.+.. +
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence            4556 89999999999988754 556899999999999877655444   332 1  345555412   223333322 3


Q ss_pred             CccEEEeCCCch--------------------------hHhhhHhhhhcCCEEEEEecc
Q 024337          149 GIDVYFENVGGK--------------------------TLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       149 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ++|++++++|-.                          ..+..+..|++.|+++.++..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            799999999841                          134567777889999988764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.35  E-value=1.1e-06  Score=68.16  Aligned_cols=105  Identities=19%  Similarity=0.278  Sum_probs=74.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---e--eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~--~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.++++..   .  ..|..+.++..+.+.+...  +++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6899999999999999999999999999999999999988777676542   1  2355554233333333221  4799


Q ss_pred             EEEeCCCc-h----h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          152 VYFENVGG-K----T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       152 ~vid~~g~-~----~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++++++|. .    .                       .+.+++.|.+  +|+++.++....
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~  146 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS  146 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG
T ss_pred             eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccc
Confidence            99999983 1    0                       2456666643  578888876544

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.30  E-value=1.5e-06  Score=66.74  Aligned_cols=105  Identities=13%  Similarity=0.119  Sum_probs=73.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---e--eEecCChhhHHHHHHHHCC--CCcc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~--~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.++++..   .  ..|..+..+..+.+.+...  +++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5899999999999999999999999999999999999888776666542   1  2355554122222222221  4799


Q ss_pred             EEEeCCCch---h-----------------------HhhhHhhhhc---CCEEEEEecccc
Q 024337          152 VYFENVGGK---T-----------------------LDAVLPNMKI---RGRIAACGMISQ  183 (269)
Q Consensus       152 ~vid~~g~~---~-----------------------~~~~~~~l~~---~G~~v~~g~~~~  183 (269)
                      ++++++|..   .                       .+.+++.|.+   +|++|.++...+
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~  145 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG  145 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce
Confidence            999999841   0                       2445666654   358888876554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.30  E-value=2.2e-06  Score=65.98  Aligned_cols=81  Identities=14%  Similarity=0.238  Sum_probs=60.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhH---HHHHHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADL---NAALKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~---~~~i~~~~~~~  149 (269)
                      +|+++||+||++++|.++++.+...|++|+.+++++++.+.+.+   +.+...   ..|..+.++.   .+.+.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999999987665543   334332   3455554222   33344445557


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            9999999985

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.2e-06  Score=67.01  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=61.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +|+++||+||++++|.++++.+...|++|+++++++++.+.+.+..+.. ...|.+.. +..+...+.. +++|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence            6899999999999999999999999999999999999888777444443 24455444 5555555443 3699999998


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            85

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.3e-06  Score=65.71  Aligned_cols=105  Identities=15%  Similarity=0.174  Sum_probs=72.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----c----eeEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----D----EAFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~----~~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      .|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.+++..    .    ...|..+..+..+.+.+...  +
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999987766544422    1    12355554233333333222  3


Q ss_pred             CccEEEeCCCc---hh---------------HhhhHhhhhc-----CCEEEEEecccc
Q 024337          149 GIDVYFENVGG---KT---------------LDAVLPNMKI-----RGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  183 (269)
                      ++|++++++|.   ..               ...+++.|.+     +|++|.++...+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            79999999985   11               2344555543     488999887654

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=98.26  E-value=2.8e-06  Score=65.48  Aligned_cols=101  Identities=22%  Similarity=0.328  Sum_probs=73.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ..++++||++||=.|+  |.|.++..+|+..|  .+|++++.+++..+.+++   .++....+..... +.    .....
T Consensus        97 ~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-d~----~~~~~  169 (266)
T d1o54a_          97 MMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DI----SEGFD  169 (266)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CG----GGCCS
T ss_pred             HhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-cc----ccccc
Confidence            5688999999999996  55888889999875  599999999998887764   3444322222111 21    12222


Q ss_pred             C-CccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          148 E-GIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .+|.|+--.+.  ..+..+.+.|+|+|+++.+..
T Consensus       170 ~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P  205 (266)
T d1o54a_         170 EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  205 (266)
T ss_dssp             CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             ccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEeC
Confidence            3 78977766664  688999999999999997643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.25  E-value=2.4e-07  Score=70.57  Aligned_cols=99  Identities=13%  Similarity=0.156  Sum_probs=65.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe--cCCh---hhHHHHHHHHCCC-CccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN--YKEE---ADLNAALKRYFPE-GIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~--~~~~---~~~~~~i~~~~~~-~~d~  152 (269)
                      ++++|||+||++|+|.++++.+...|++|+.+++++.+...      ......  ....   ......+.+..+. ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS------ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS------EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            47899999999999999999999999999999876442111      011111  1111   0223333333333 7999


Q ss_pred             EEeCCCc-h---h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          153 YFENVGG-K---T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       153 vid~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +++++|. .   .                       .+.+++.|+++|+++.++....
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            9999883 1   0                       2446667788999999977654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.25  E-value=3.4e-06  Score=64.93  Aligned_cols=105  Identities=15%  Similarity=0.242  Sum_probs=73.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHH---HHHHCCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAA---LKRYFPEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~---i~~~~~~~  149 (269)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+.+++   +...   ..|..+..+..+.   +.+..+++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998876654343   3322   3455554233322   33333447


Q ss_pred             ccEEEeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          150 IDVYFENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       150 ~d~vid~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      +|++++++|..   .                       .+.+++.|.+  +|++|.++....
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~  148 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG  148 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence            99999999841   0                       2445555543  689999887554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.23  E-value=5.4e-06  Score=63.84  Aligned_cols=105  Identities=16%  Similarity=0.258  Sum_probs=70.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH----HcCCce---eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKN----KFGFDE---AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      +|++++|+||++|+|.++++.+...|++|++++++ +++.+.+.+    ..|...   ..|..+..+..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999999999986 344443322    334432   2355554233333332221  4


Q ss_pred             CccEEEeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          149 GIDVYFENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      ++|++++++|..   .                       .+.+++.|++  +|++|.++...+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  145 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG  145 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence            799999999841   0                       2455666654  589999877654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.23  E-value=1.8e-06  Score=67.05  Aligned_cols=81  Identities=17%  Similarity=0.278  Sum_probs=58.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc------eeEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~------~~~~~~~~~~~~~~i~~~~~--  147 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.+++   +..      ...|..+.++..+.+.+...  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999998877665433   221      13355554233333333221  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (272)
T d1xkqa_          84 GKIDVLVNNAGA   95 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeCCcc
Confidence            479999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.23  E-value=5.7e-06  Score=63.18  Aligned_cols=105  Identities=16%  Similarity=0.196  Sum_probs=70.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDV  152 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~  152 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++ .+...++.|...   ..|..+..+....+.+...  +++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999986542 233322666532   3455554233333333221  47999


Q ss_pred             EEeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          153 YFENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       153 vid~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      +++++|..   .                       .+.+++.|++  +|++|.++....
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            99999841   1                       2445556654  589998876554

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.21  E-value=5.4e-06  Score=64.30  Aligned_cols=104  Identities=18%  Similarity=0.284  Sum_probs=71.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +|++++|+||++|+|.++++.+...|++|++++++ ++..+.+.+   +.+...   ..|..+..+..+.+.+...  ++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            48999999999999999999999999999998866 443333221   445432   2344443233333333322  37


Q ss_pred             ccEEEeCCCchh--------------------------HhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGGKT--------------------------LDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|+++++.|...                          .+.+++.|.++|+++.++...
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence            999999987411                          356777788889998887644

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.20  E-value=5e-06  Score=59.42  Aligned_cols=106  Identities=14%  Similarity=0.075  Sum_probs=75.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE-ecCCh------------------hhHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEE------------------ADLN  139 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~-~~~~~------------------~~~~  139 (269)
                      +..+|+|+|+ |-.|+.+++.|+.+|++|.+.+.+.++++.++ +++...+. +....                  ....
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            3568999999 99999999999999999999999999999999 88764321 00000                  0112


Q ss_pred             HHHHHHCCCCccEEEeCCC---c----hhHhhhHhhhhcCCEEEEEeccccccCC
Q 024337          140 AALKRYFPEGIDVYFENVG---G----KTLDAVLPNMKIRGRIAACGMISQYNLD  187 (269)
Q Consensus       140 ~~i~~~~~~~~d~vid~~g---~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~  187 (269)
                      +.+.+... ..|+||-++=   .    -.-+..++.|++++.+|.+....+-++.
T Consensus       106 ~~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~E  159 (183)
T d1l7da1         106 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP  159 (183)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred             HHHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccc
Confidence            22332222 4899998873   2    1347899999999999999876554443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=1.9e-06  Score=66.20  Aligned_cols=81  Identities=22%  Similarity=0.362  Sum_probs=58.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EGI  150 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~  150 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.+   +.|...   ..|..++.+..+.+.+...  +++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999887765543   334322   3455554222222222221  479


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999984

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.5e-06  Score=64.14  Aligned_cols=105  Identities=20%  Similarity=0.215  Sum_probs=70.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCce-e--EecCChhhHHHH-HHHHC--C
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGFDE-A--FNYKEEADLNAA-LKRYF--P  147 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~----~g~~~-~--~~~~~~~~~~~~-i~~~~--~  147 (269)
                      -+|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.++    .+... .  .|..+. ..... .....  .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM-TFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhH-HHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999988766433    22221 1  223322 22222 22111  2


Q ss_pred             CCccEEEeCCCchh--------------------------HhhhHhhhhc-CCEEEEEecccc
Q 024337          148 EGIDVYFENVGGKT--------------------------LDAVLPNMKI-RGRIAACGMISQ  183 (269)
Q Consensus       148 ~~~d~vid~~g~~~--------------------------~~~~~~~l~~-~G~~v~~g~~~~  183 (269)
                      +..|+++++.|...                          .+..+..|+. +|+++.++...+
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~  153 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG  153 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence            36899998877410                          2344455543 789998887654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.17  E-value=2.4e-06  Score=65.99  Aligned_cols=81  Identities=14%  Similarity=0.259  Sum_probs=57.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc------eeEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~------~~~~~~~~~~~~~~i~~~~~--  147 (269)
                      +|+.++|+||++|+|.++++.+...|++|+++++++++.+.+.+++   +..      ...|..+..+..+.+.+...  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6889999999999999999999999999999999998877654333   221      13355554233333333221  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            479999999873

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.17  E-value=8.7e-06  Score=64.00  Aligned_cols=105  Identities=24%  Similarity=0.234  Sum_probs=69.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC---------HHHHHHHHH---HcCCceeEecCChhhHHHHHHHHC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS---------KDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s---------~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      +|++++|+||++|+|.++++.+...|++|++.+++         .+..+.+.+   ..+.....|..+..+..+.+.+..
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            58999999999999999999999999999998653         333333222   233344555555323333333222


Q ss_pred             --CCCccEEEeCCCch---h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          147 --PEGIDVYFENVGGK---T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       147 --~~~~d~vid~~g~~---~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                        -+++|++++++|..   .                       .+.+++.|++  +|++|.++...+
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence              24799999999841   0                       3556666654  589999987554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.17  E-value=3.7e-06  Score=64.66  Aligned_cols=105  Identities=20%  Similarity=0.232  Sum_probs=71.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-ce----eEecCChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-DE----AFNYKEEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~-~~----~~~~~~~~~~~~~i~~~~~--~  148 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.+++   +. ..    ..|..+..+..+.+.+...  +
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999998876554332   22 11    2355554233333333221  4


Q ss_pred             CccEEEeCCCc--h--h-----------------------HhhhHhhhh--cCCEEEEEecccc
Q 024337          149 GIDVYFENVGG--K--T-----------------------LDAVLPNMK--IRGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~--~--~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  183 (269)
                      ++|++++++|.  .  .                       .+.+++.|+  .+|++|.++....
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  146 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG  146 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhh
Confidence            79999999873  1  1                       234555554  4789999887654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.16  E-value=4.6e-06  Score=64.20  Aligned_cols=104  Identities=19%  Similarity=0.264  Sum_probs=69.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      .|+++||+||++|+|.++++.+...|++|++++++ ++..+.+.+   +.|...   ..|..+.++..+.+.+...  ++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999987654 444443322   455532   2344443233333333221  37


Q ss_pred             ccEEEeCCCch--------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337          150 IDVYFENVGGK--------------------------TLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       150 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +|++++++|..                          ..+.++..|+++|+++.+....
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            99999999851                          1356777778888887776543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=2.9e-06  Score=66.68  Aligned_cols=84  Identities=17%  Similarity=0.273  Sum_probs=59.4

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CCc---eeEecCChhhHHHHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--------GFD---EAFNYKEEADLNAALKR  144 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--------g~~---~~~~~~~~~~~~~~i~~  144 (269)
                      +.-+|++++|+||++|+|.++++.+...|++|+++++++++.+.+.+++        +..   ...|..+..+..+.+.+
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999999988876554333        111   12355554233333333


Q ss_pred             HCC--CCccEEEeCCCc
Q 024337          145 YFP--EGIDVYFENVGG  159 (269)
Q Consensus       145 ~~~--~~~d~vid~~g~  159 (269)
                      ...  +++|++++++|.
T Consensus        88 ~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHhCCeEEEEeeccc
Confidence            221  379999999884

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.14  E-value=2.9e-06  Score=65.92  Aligned_cols=81  Identities=19%  Similarity=0.325  Sum_probs=57.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc------eeEecCChhhHHHHHHHHCC--
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEADLNAALKRYFP--  147 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~------~~~~~~~~~~~~~~i~~~~~--  147 (269)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.+++   +..      ...|..+..+..+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999998876654333   321      13455554233333333221  


Q ss_pred             CCccEEEeCCCc
Q 024337          148 EGIDVYFENVGG  159 (269)
Q Consensus       148 ~~~d~vid~~g~  159 (269)
                      +++|++++++|.
T Consensus        83 G~iDilVnnAG~   94 (274)
T d1xhla_          83 GKIDILVNNAGA   94 (274)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeeccc
Confidence            379999999873

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.12  E-value=1e-05  Score=61.21  Aligned_cols=73  Identities=23%  Similarity=0.345  Sum_probs=54.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +|+++||+||++|+|.++++.+...|++|+.++++++..+    +.+... ..|.++  +... +.+.. +++|++++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~~~-~~~~~-g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DLDL-LFEKV-KEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CHHH-HHHHS-CCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HHHH-HHHHh-CCCcEEEecc
Confidence            5899999999999999999999999999999999876544    444433 333332  3333 33333 3699999999


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      |.
T Consensus        75 G~   76 (234)
T d1o5ia_          75 GG   76 (234)
T ss_dssp             CC
T ss_pred             cc
Confidence            84

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.12  E-value=4.1e-06  Score=64.43  Aligned_cols=80  Identities=15%  Similarity=0.246  Sum_probs=57.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCC--CCcc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFP--EGID  151 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d  151 (269)
                      |+.+||+||++|+|.++++.+...|++|+++++++++.+.+.++   .|...   ..|..+..+..+.+.+...  +++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            57789999999999999999999999999999998877665433   34332   3455554233333333221  4799


Q ss_pred             EEEeCCCc
Q 024337          152 VYFENVGG  159 (269)
Q Consensus       152 ~vid~~g~  159 (269)
                      ++++++|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999984

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.11  E-value=3.5e-06  Score=64.91  Aligned_cols=81  Identities=11%  Similarity=0.133  Sum_probs=57.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HcCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN----KFGFDE---AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+.+    +.|...   ..|..+.++..+.+.+..  -++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999999999998776544322    445432   345555423333333322  247


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999974

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=98.10  E-value=9.3e-06  Score=58.00  Aligned_cols=94  Identities=14%  Similarity=0.035  Sum_probs=66.6

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      +..++.++++|+|+|+ ||.+.+++..++..|+ +++++.|+.++.+.+.+.++...+ +...            ...+|
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~------------~~~~D   75 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE------------NQQAD   75 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT------------TCCCS
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc------------ccchh
Confidence            4456778899999998 9999999999999998 899999999998887757765432 2111            12589


Q ss_pred             EEEeCCCch---h-----HhhhHhhhhcCCEEEEEec
Q 024337          152 VYFENVGGK---T-----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       152 ~vid~~g~~---~-----~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++++|++-.   .     +......+.+...++.+-.
T Consensus        76 liINaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY  112 (167)
T d1npya1          76 ILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  112 (167)
T ss_dssp             EEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             hheeccccCCccccccccccccHhhcCCcceEEEEee
Confidence            999998721   1     1112334566666666543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.08  E-value=5.1e-07  Score=68.69  Aligned_cols=98  Identities=16%  Similarity=0.162  Sum_probs=64.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCC--h---hhHHHHHHHHC-CCCccEE
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE--E---ADLNAALKRYF-PEGIDVY  153 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~--~---~~~~~~i~~~~-~~~~d~v  153 (269)
                      +.+|||+||++|+|.++++.+...|++|+.+++++++...      ....+..+.  .   ....+.+.... .+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc------ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            3578999999999999999999999999999987653211      011111111  0   01122223322 3489999


Q ss_pred             EeCCCc-h---h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          154 FENVGG-K---T-----------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       154 id~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      ++++|. .   .                       .+..+..|+++|+++.++....
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~  132 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA  132 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence            999984 1   0                       2456677788899999876543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.07  E-value=2.8e-05  Score=54.88  Aligned_cols=74  Identities=20%  Similarity=0.279  Sum_probs=58.5

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      .--.+.+|||.|+ |.+|.++++.+...|+ +++++.|+.++.+.+.++++.. ..+++   ++.+.+.     .+|+||
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~---~~~~~l~-----~~Divi   89 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD---ELVDHLA-----RSDVVV   89 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG---GHHHHHH-----TCSEEE
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch---hHHHHhc-----cCCEEE
Confidence            3347889999998 9999999999999998 7999999988877665588854 44443   5555554     499999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      .|++.
T Consensus        90 ~atss   94 (159)
T d1gpja2          90 SATAA   94 (159)
T ss_dssp             ECCSS
T ss_pred             EecCC
Confidence            99986

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.06  E-value=1e-05  Score=63.40  Aligned_cols=81  Identities=15%  Similarity=0.261  Sum_probs=57.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HcCCce-e--EecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN----KFGFDE-A--FNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.+    +.|... .  .|..+..+....+....  .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            57999999999999999999999999999999999887654432    334332 2  34444312222222221  247


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus       104 iDilvnnAg~  113 (294)
T d1w6ua_         104 PNIVINNAAG  113 (294)
T ss_dssp             CSEEEECCCC
T ss_pred             cchhhhhhhh
Confidence            9999999984

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.04  E-value=8.3e-06  Score=62.58  Aligned_cols=105  Identities=13%  Similarity=0.122  Sum_probs=68.6

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCcee--EecCChhhHHHHHHHHC--CCC
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEA--FNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~--~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +|++++|+||+|  |+|.++++.+...|++|+++.++++..+.+++   ..+....  .|..+.++..+.+.+..  -++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            689999999987  89999999999999999999988765443321   3333333  34444312222222221  147


Q ss_pred             ccEEEeCCCch---h---------------------------HhhhHhhhhcCCEEEEEecccc
Q 024337          150 IDVYFENVGGK---T---------------------------LDAVLPNMKIRGRIAACGMISQ  183 (269)
Q Consensus       150 ~d~vid~~g~~---~---------------------------~~~~~~~l~~~G~~v~~g~~~~  183 (269)
                      +|++++++|..   .                           .+.+...++++|+++.++....
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            99999998731   0                           1334456667899998876554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.04  E-value=7.7e-06  Score=62.94  Aligned_cols=81  Identities=21%  Similarity=0.220  Sum_probs=55.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP--EG  149 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~--~~  149 (269)
                      +|++++|+||++|+|.++++.+...|++|++++++.+ ..+.+.+   +.|...   ..|..+.++..+.+++...  ++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999998744 3333221   445432   3355554233333333221  47


Q ss_pred             ccEEEeCCCc
Q 024337          150 IDVYFENVGG  159 (269)
Q Consensus       150 ~d~vid~~g~  159 (269)
                      +|++++++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999984

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.04  E-value=1.6e-05  Score=60.89  Aligned_cols=101  Identities=17%  Similarity=0.134  Sum_probs=72.4

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcC------Ccee-EecCChhhHHHHHH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFG------FDEA-FNYKEEADLNAALK  143 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g------~~~~-~~~~~~~~~~~~i~  143 (269)
                      ..++++||++||=.|.  |.|.++..+|+..|.  +|+.++.+++..+.+++++.      .+.+ +...   +..+  .
T Consensus        90 ~~l~i~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~--~  162 (264)
T d1i9ga_          90 HEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLAD--S  162 (264)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGG--C
T ss_pred             HHhCCCCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---cccc--c
Confidence            5688999999999985  779999999999874  99999999999888875332      1221 1111   1111  0


Q ss_pred             HHCCCCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          144 RYFPEGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ...++.||.||--...  ..+..+.+.|+++|+++.+..
T Consensus       163 ~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P  201 (264)
T d1i9ga_         163 ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  201 (264)
T ss_dssp             CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeC
Confidence            1112379977665664  788899999999999988743

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.02  E-value=7.8e-06  Score=62.72  Aligned_cols=79  Identities=15%  Similarity=0.174  Sum_probs=56.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHC--CCCccE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYF--PEGIDV  152 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~  152 (269)
                      +.+||+||++|+|.++++.+...|++|+.+++++++.+.+.++   .|...   ..|..+.++..+.+.+..  -+++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4569999999999999999999999999999999887665433   34322   345555423333333322  147999


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      +++++|.
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999984

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.02  E-value=6.7e-06  Score=61.12  Aligned_cols=111  Identities=17%  Similarity=0.227  Sum_probs=75.5

Q ss_pred             cCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChh
Q 024337           60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEA  136 (269)
Q Consensus        60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~  136 (269)
                      ++.+...| .++ +...++++++||..|+  |.|+.++.+++..|.+|+++...++-.+.+++   ++|.+.+.-...  
T Consensus        61 is~P~~~a-~ml-~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g--  134 (215)
T d1jg1a_          61 VSAPHMVA-IML-EIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG--  134 (215)
T ss_dssp             ECCHHHHH-HHH-HHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred             hhhhhhHH-HHH-HhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC--
Confidence            33343334 334 6678999999999994  78999999999889899999998876555543   556654322222  


Q ss_pred             hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          137 DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       137 ~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      +..+..  ...++||.|+-+.+. ..-...++.|+++|+++..
T Consensus       135 d~~~g~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         135 DGSKGF--PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             CGGGCC--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccccCC--cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            111100  011379999887775 4456788899999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.00  E-value=1.3e-05  Score=60.90  Aligned_cols=103  Identities=23%  Similarity=0.274  Sum_probs=68.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCCcc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ..+||+||++|+|.++++.+...|++|+..+ ++++..+.+.+   +.|...   ..|..+.++..+.+.+..  -+++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999998875 46555554432   344432   335555422222222221  14799


Q ss_pred             EEEeCCCch---h-----------------------HhhhHhhhh--cCCEEEEEecccc
Q 024337          152 VYFENVGGK---T-----------------------LDAVLPNMK--IRGRIAACGMISQ  183 (269)
Q Consensus       152 ~vid~~g~~---~-----------------------~~~~~~~l~--~~G~~v~~g~~~~  183 (269)
                      ++++++|..   .                       .+.+++.|.  .+|++|.++...+
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  141 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence            999999841   0                       355666664  4799999987554

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.00  E-value=1.6e-05  Score=60.38  Aligned_cols=103  Identities=16%  Similarity=0.153  Sum_probs=70.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCE-------EEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC-
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCY-------VVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF-  146 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~-------V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~-  146 (269)
                      +.|||+||++|+|.++++.+...|++       |+..++++++.+.+.+++   |...   ..|..+..+..+.+.+.. 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35799999999999999999989987       899999998877655343   3321   235555423333232222 


Q ss_pred             -CCCccEEEeCCCchh--------------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          147 -PEGIDVYFENVGGKT--------------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       147 -~~~~d~vid~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                       -+++|++++++|...                          .+.+++.|++  +|+++.++....
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence             137999999998410                          3556666654  689999877554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.99  E-value=9.8e-06  Score=61.93  Aligned_cols=80  Identities=14%  Similarity=0.118  Sum_probs=57.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCc---eeEecCChhh---HHHHHHHHCCC-Cc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEAD---LNAALKRYFPE-GI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~---~~~~i~~~~~~-~~  150 (269)
                      .++|||+||++|+|.++++.+...|+  +|+.++|+.++.+.+++..+..   ..+|..+..+   +.+.+.+..+. ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47999999999999999998888886  7999999999888887333332   1335555312   33334433333 69


Q ss_pred             cEEEeCCCc
Q 024337          151 DVYFENVGG  159 (269)
Q Consensus       151 d~vid~~g~  159 (269)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999983

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=8.3e-06  Score=62.14  Aligned_cols=106  Identities=18%  Similarity=0.161  Sum_probs=73.6

Q ss_pred             HHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHH
Q 024337           67 AYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALK  143 (269)
Q Consensus        67 a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~  143 (269)
                      -+..|....+++|+++||=+|+  |.|..+..+++..|++|++++.|++..+.+++   ..|....++.... +.    .
T Consensus        21 ~~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~----~   93 (245)
T d1nkva_          21 KYATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DA----A   93 (245)
T ss_dssp             HHHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CC----T
T ss_pred             HHHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HH----h
Confidence            3445667789999999999997  55777888888889999999999998877663   3354321111111 11    1


Q ss_pred             HHC-CCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEe
Q 024337          144 RYF-PEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       144 ~~~-~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +.. .++||.|+..-.-       ..+.++.+.|+|+|+++...
T Consensus        94 ~~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          94 GYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             TCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             hccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            112 3489999754321       46788899999999998754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.95  E-value=1.8e-06  Score=64.45  Aligned_cols=100  Identities=19%  Similarity=0.209  Sum_probs=69.8

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      +..+++++++||-.|+  |.|..++.+++..|.  +|++++.+++..+.+++.+   +...+.-...  +..+...  ..
T Consensus        69 ~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~--d~~~~~~--~~  142 (213)
T d1dl5a1          69 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG--DGYYGVP--EF  142 (213)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--CGGGCCG--GG
T ss_pred             HhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC--chHHccc--cc
Confidence            5678999999999996  568999999998764  8999999999887776433   3332211111  1100000  11


Q ss_pred             CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       148 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      +.||.|+.+.+- ......++.|+++|+++..
T Consensus       143 ~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             cchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            369999988775 4456788999999999874

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.95  E-value=3.6e-05  Score=59.92  Aligned_cols=104  Identities=11%  Similarity=0.046  Sum_probs=72.1

Q ss_pred             HHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH
Q 024337           69 VGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        69 ~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      ..+.+.+++++|++||=+|.  |.|..+..+|+..|++|++++.|++..+.+++   ..|....+..... ++     ..
T Consensus        51 ~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~~  122 (291)
T d1kpia_          51 KLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----EE  122 (291)
T ss_dssp             HHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----GG
T ss_pred             HHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----cc
Confidence            33446678999999999996  67778889999999999999999998766542   4455432221111 21     12


Q ss_pred             CCCCccEEEe-----CCCc-----------hhHhhhHhhhhcCCEEEEEec
Q 024337          146 FPEGIDVYFE-----NVGG-----------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       146 ~~~~~d~vid-----~~g~-----------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .++.||.|+.     ..+.           ..++.+.++|+|+|+++.-..
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~i  173 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  173 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence            2358998864     2221           246778999999999987543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.94  E-value=5.2e-06  Score=63.63  Aligned_cols=100  Identities=20%  Similarity=0.137  Sum_probs=67.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----CceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----FDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +.||+||++|+|+++++.+...|++|++.+++.++.+.++ ..+    ...+.+..+...+.+.+.+.. |++|++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEECC
Confidence            6899999999999999999999999999999888777665 332    222333332213333333332 4799999887


Q ss_pred             Cc--h--h-----------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          158 GG--K--T-----------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       158 g~--~--~-----------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      |.  .  .                       .+.+++.|++  +|++|.++....
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~  134 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP  134 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc
Confidence            63  1  1                       2345555544  699999977554

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=4.9e-05  Score=54.30  Aligned_cols=102  Identities=11%  Similarity=0.018  Sum_probs=65.8

Q ss_pred             HHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCC
Q 024337           70 GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        70 ~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      +|.+..-..++++|+|+|+ ||.+.+++..+..+|++|+++.|+.++.+.+.+.+.....+..... +      +.....
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-~------~~~~~~   79 (170)
T d1nyta1           8 DLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM-D------ELEGHE   79 (170)
T ss_dssp             HHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-G------GGTTCC
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccc-c------cccccc
Confidence            4533333457899999998 9999999999999999999999999988777645543221111111 1      111136


Q ss_pred             ccEEEeCCCchh----HhhhHhhhhcCCEEEEEe
Q 024337          150 IDVYFENVGGKT----LDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       150 ~d~vid~~g~~~----~~~~~~~l~~~G~~v~~g  179 (269)
                      +|++++|++...    ...-...++++..++.+-
T Consensus        80 ~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~v  113 (170)
T d1nyta1          80 FDLIINATSSGISGDIPAIPSSLIHPGIYCYDMF  113 (170)
T ss_dssp             CSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             cceeecccccCcccCCCCCcHHHhccCcEEEEee
Confidence            999999997421    112234466666555543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.93  E-value=9.6e-06  Score=60.65  Aligned_cols=97  Identities=10%  Similarity=0.038  Sum_probs=68.3

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      +...++++++||-.|+  |.|..++.+++. +.+|++++.+++..+.+++.+...   .++..+.    .....+  .++
T Consensus        64 ~~L~l~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~----~~g~~~--~~p  134 (224)
T d1vbfa_          64 DELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDG----TLGYEE--EKP  134 (224)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG----GGCCGG--GCC
T ss_pred             HHhhhcccceEEEecC--CCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCch----hhcchh--hhh
Confidence            5678999999999995  678888877775 679999999999888887544332   1222111    110111  137


Q ss_pred             ccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          150 IDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       150 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      ||.|+-+.+. ......++.|++||++|..
T Consensus       135 fD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         135 YDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             EEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             HHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            9998876664 4556678899999999875

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.91  E-value=1.4e-05  Score=60.74  Aligned_cols=101  Identities=9%  Similarity=0.078  Sum_probs=70.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ..++++||++||=.|+  |.|.++..+|+..|.  +|++++.+++..+.+++++   +...-+..... ++.    +...
T Consensus        79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~-Di~----~~~~  151 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-DIA----DFIS  151 (250)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-CTT----TCCC
T ss_pred             HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe-eee----cccc
Confidence            4578999999999996  568888899988754  9999999999988887544   22111121111 222    2222


Q ss_pred             -CCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          148 -EGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 -~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       +.||.|+--.+.  ..+..+.+.|+|+|+++.+..
T Consensus       152 ~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         152 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             cceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence             379988755554  688999999999999987643

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.89  E-value=3e-05  Score=60.16  Aligned_cols=103  Identities=12%  Similarity=0.045  Sum_probs=71.6

Q ss_pred             HHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHC
Q 024337           70 GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        70 ~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      .+.+.+++++|++||-+|+  |.|..++.+++..|++|++++.|++..+.+++.   .|...-+..... ++    ++ .
T Consensus        53 ~~~~~l~l~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~~-~  124 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQ-F  124 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GG-C
T ss_pred             HHHHHcCCCCCCEEEEecC--cchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----hc-c
Confidence            3445678999999999996  789999999999999999999999988877632   233221111111 21    11 2


Q ss_pred             CCCccEEEe-----CCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFE-----NVGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++.||.|+.     ..|.    ..++.+.+.|+|+|+++....
T Consensus       125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence            347887754     3332    346788999999999986544

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.85  E-value=3.6e-06  Score=63.87  Aligned_cols=76  Identities=13%  Similarity=0.128  Sum_probs=54.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCC--CCccEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP--EGIDVYFEN  156 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~--~~~d~vid~  156 (269)
                      +|++++|+||++|+|.++++.+...|++|++++++++..+.+.     ....|..+..+..+.+.+...  +++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            5899999999999999999999999999999998866443221     123455554222222332221  379999999


Q ss_pred             CCc
Q 024337          157 VGG  159 (269)
Q Consensus       157 ~g~  159 (269)
                      +|.
T Consensus        81 AG~   83 (237)
T d1uzma1          81 AGL   83 (237)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            984

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.80  E-value=1.4e-05  Score=61.22  Aligned_cols=105  Identities=16%  Similarity=0.113  Sum_probs=66.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCce----eEecC-ChhhHHHHHHHHCC--C
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK---NKFGFDE----AFNYK-EEADLNAALKRYFP--E  148 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~---~~~g~~~----~~~~~-~~~~~~~~i~~~~~--~  148 (269)
                      +|++++|+||++|+|.+++..+...|++|++++++.++.+.+.   ...+-..    ..|.. +..+..+.+.+...  +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999987665443332   1223221    23433 22123222322221  3


Q ss_pred             CccEEEeCCCc---hh---------------HhhhHhhhh-----cCCEEEEEecccc
Q 024337          149 GIDVYFENVGG---KT---------------LDAVLPNMK-----IRGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~---~~---------------~~~~~~~l~-----~~G~~v~~g~~~~  183 (269)
                      ++|++++++|.   +.               .+.+++.|.     ++|+++.++...+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            79999999995   21               234444553     2588888876554

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=8.8e-05  Score=57.59  Aligned_cols=103  Identities=19%  Similarity=0.226  Sum_probs=64.3

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEE---EeCCHHHHH---HHHHHcCC---c---eeEecCChhhHHHHHHHHCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVG---SAGSKDKVD---LLKNKFGF---D---EAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~---~~~s~~~~~---~~~~~~g~---~---~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      +.|||+||++|+|.++++.+...|++|+.   +.++.++.+   ...+++..   .   ...|..+..+....+.+...+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            45789999999999999999999986544   444433322   22213322   1   134666552333434444445


Q ss_pred             CccEEEeCCCchh--------------------------HhhhHhhhhc--CCEEEEEecccc
Q 024337          149 GIDVYFENVGGKT--------------------------LDAVLPNMKI--RGRIAACGMISQ  183 (269)
Q Consensus       149 ~~d~vid~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~  183 (269)
                      .+|+++++.|...                          .+.++..|.+  +|++|.++...+
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g  145 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG  145 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence            8999999987410                          2445566643  689999887654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.76  E-value=0.00012  Score=55.98  Aligned_cols=83  Identities=16%  Similarity=0.217  Sum_probs=56.5

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHcCCce---eEecCChhhHHHHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK-------VDLLKNKFGFDE---AFNYKEEADLNAALKR  144 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~-------~~~~~~~~g~~~---~~~~~~~~~~~~~i~~  144 (269)
                      .++|+.++||+||++|+|+++++.+...|+ +|+.+.|+..+       .+.++ ..|...   ..|..+..+....+.+
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence            578999999999999999999999999999 68888776322       22333 556532   3455554233333333


Q ss_pred             HCCC-CccEEEeCCCc
Q 024337          145 YFPE-GIDVYFENVGG  159 (269)
Q Consensus       145 ~~~~-~~d~vid~~g~  159 (269)
                      .... ++|.++.+.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            3333 78999999984

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=2.1e-05  Score=58.12  Aligned_cols=96  Identities=16%  Similarity=0.121  Sum_probs=63.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .++|+|+||+|.+|..++..+...|.+|.+++|++++..... ..+... ..|..+.    +.+.+... ++|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~----~~l~~al~-~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQA----ADVDKTVA-GQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSH----HHHHHHHT-TCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccch----hhHHHHhc-CCCEEEEEec
Confidence            468999999999999999999889999999999988765433 333322 2234333    22322222 5899999998


Q ss_pred             ch-----------hHhhhHhhhhcC--CEEEEEecc
Q 024337          159 GK-----------TLDAVLPNMKIR--GRIAACGMI  181 (269)
Q Consensus       159 ~~-----------~~~~~~~~l~~~--G~~v~~g~~  181 (269)
                      ..           .....++.++..  .+++.++..
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence            41           122344444543  478877653

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00043  Score=49.74  Aligned_cols=97  Identities=11%  Similarity=0.118  Sum_probs=62.4

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---HHcC----C-ceeEecCChhhHHHHHHHHCCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLK---NKFG----F-DEAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~---~~~g----~-~~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      -++.+|+|+|+ ||.+.+++..+..+|+ +++++.|+.++.+.++   ++++    . ....+..+.+++.+.+.     
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   89 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-----   89 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----
Confidence            36789999998 9999999999999998 8999998866554332   1222    2 12344443213333332     


Q ss_pred             CccEEEeCCCchh-------HhhhHhhhhcCCEEEEEec
Q 024337          149 GIDVYFENVGGKT-------LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+|++|+|++-..       +..-+..++++..++.+..
T Consensus        90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y  128 (182)
T d1vi2a1          90 SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY  128 (182)
T ss_dssp             TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred             ccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence            4899999997311       1122455677777777644

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.72  E-value=5.1e-05  Score=58.75  Aligned_cols=102  Identities=14%  Similarity=0.136  Sum_probs=69.4

Q ss_pred             HHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHC
Q 024337           70 GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        70 ~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      .+.+..++++|++||=+|.  |.|..+..+++..|++|++++.|++..+.+++.   .|....+..... ++    ++ .
T Consensus        43 ~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~~-~  114 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----ED-F  114 (280)
T ss_dssp             HHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GG-C
T ss_pred             HHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----hh-h
Confidence            3445568999999999997  556677888999999999999999998877643   243221111111 11    11 2


Q ss_pred             CCCccEEEe-----CCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          147 PEGIDVYFE-----NVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       147 ~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ++.||.|+.     ..+.    ..++.+.+.|+|+|++++-.
T Consensus       115 ~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         115 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence            347898853     3332    24678899999999998753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=7.1e-05  Score=56.87  Aligned_cols=49  Identities=14%  Similarity=0.103  Sum_probs=44.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD  127 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~  127 (269)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998887776677764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.66  E-value=3.3e-05  Score=58.78  Aligned_cols=79  Identities=13%  Similarity=0.178  Sum_probs=52.7

Q ss_pred             CEEEEecCcchHHHHHHHHHH---HcCCEEEEEeCCHHHHHHHHH--HcCCc---eeEecCChhhH---HHHHHHHCC-C
Q 024337           81 ECVFISAASGAVGQLVGQFAK---LLGCYVVGSAGSKDKVDLLKN--KFGFD---EAFNYKEEADL---NAALKRYFP-E  148 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~---~~G~~V~~~~~s~~~~~~~~~--~~g~~---~~~~~~~~~~~---~~~i~~~~~-~  148 (269)
                      ++|||+||++|+|+++++.+.   ..|++|++++|++++.+.+++  +.+..   ..+|..+.++.   .+.++.... +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            589999999999999887664   468999999999887655542  11221   13455554233   333333333 3


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|++++++|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            79999999873

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=0.0001  Score=55.02  Aligned_cols=95  Identities=19%  Similarity=0.194  Sum_probs=66.7

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcC---C-----ce--eEecCChhhHHHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFG---F-----DE--AFNYKEEADLNAALK  143 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g---~-----~~--~~~~~~~~~~~~~i~  143 (269)
                      .+++|++||-.|.  |.|..++.+++..|.  +|++++.+++-.+.+++.+.   .     ..  ....+    ......
T Consensus        73 ~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD----~~~~~~  146 (224)
T d1i1na_          73 QLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD----GRMGYA  146 (224)
T ss_dssp             TSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC----GGGCCG
T ss_pred             ccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee----cccccc
Confidence            7899999999995  779999999998763  99999999988777654332   1     11  11111    000000


Q ss_pred             HHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          144 RYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       144 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                        ..+.||.|+.+... ......++.|++||++|..
T Consensus       147 --~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         147 --EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             --GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             --hhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence              01379999987775 5567789999999999875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.64  E-value=0.0004  Score=49.47  Aligned_cols=96  Identities=11%  Similarity=0.099  Sum_probs=64.7

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +++|+|.|| |.+|..+++.+...|.+|++++++.++.+.+.++++.......... . ........ ...|.++.+.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~-~-~~~~~~~i-~~~~~~i~~~~~   77 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVN-D-DAALDAEV-AKHDLVISLIPY   77 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTT-C-HHHHHHHH-TTSSEEEECSCG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccccccccccccc-c-hhhhHhhh-hccceeEeeccc
Confidence            678999998 9999999999999999999999999999988755554333222211 1 11111111 147888888876


Q ss_pred             -hhHhhhHhhhhcCCEEEEEe
Q 024337          160 -KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       160 -~~~~~~~~~l~~~G~~v~~g  179 (269)
                       ........+++.+..++...
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          78 TFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             GGHHHHHHHHHHHTCEEECSS
T ss_pred             hhhhHHHHHHHhhccceeecc
Confidence             44444555556666666543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.63  E-value=0.00011  Score=56.50  Aligned_cols=82  Identities=10%  Similarity=0.071  Sum_probs=54.0

Q ss_pred             CCCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCce--eEecCChhhHHHHHHHHC--CC
Q 024337           78 KHGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~--~~  148 (269)
                      -+|+++||+||+|  |+|.++++.+...|++|+.++++++   +.+.+.++.+...  ..|.....+..+.+.+..  -+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            3689999999876  8999999999999999999998864   3333332333322  234333312222222221  24


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ++|+++.+.|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            79999999874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.62  E-value=0.00019  Score=52.08  Aligned_cols=100  Identities=13%  Similarity=0.046  Sum_probs=67.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-----------------EecCCh
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-----------------FNYKEE  135 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-----------------~~~~~~  135 (269)
                      ....+.|+.+||..|+  |.|..+..+|+ .|++|++++.|++..+.+++..+....                 +..+..
T Consensus        14 ~~l~~~~~~rvLd~GC--G~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPLC--GKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEecC--cCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            3357899999999997  66888888887 499999999999999999855433211                 101100


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       +......    ..+|.|++....         ..+..+.+.|+++|+++....
T Consensus        91 -~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~  139 (201)
T d1pjza_          91 -ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL  139 (201)
T ss_dssp             -SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred             -ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEc
Confidence             1111111    158999885542         245778889999999876543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.60  E-value=0.00017  Score=52.10  Aligned_cols=101  Identities=16%  Similarity=0.184  Sum_probs=68.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ...+++++++||=.|+  |.|..++.+++. +.+|++++.+++..+.+++   ++|...-+..... +..+....  ...
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g-da~~~~~~--~~~  100 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCK--IPD  100 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTT--SCC
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC-chhhcccc--cCC
Confidence            4468999999999996  556777777764 6699999999998887764   3454211111111 32222211  237


Q ss_pred             ccEEEeCCCc----hhHhhhHhhhhcCCEEEEEe
Q 024337          150 IDVYFENVGG----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       150 ~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ||.++...+.    ..++.+.+.|+++|+++...
T Consensus       101 ~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            9988865543    45778888999999988653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.60  E-value=0.00029  Score=53.45  Aligned_cols=96  Identities=20%  Similarity=0.137  Sum_probs=65.8

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      ..+++++||=.|+  |.|..++.+++ .|++|++++.+++..+.++++   .+....+-..   +..+.+   ..++||+
T Consensus       117 ~~~~g~~VLDiGc--GsG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d~~~~~---~~~~fD~  187 (254)
T d2nxca1         117 HLRPGDKVLDLGT--GSGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAAL---PFGPFDL  187 (254)
T ss_dssp             HCCTTCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHHG---GGCCEEE
T ss_pred             hcCccCEEEEccc--chhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---cccccc---cccccch
Confidence            3789999999997  34667766554 689999999999988877642   3443222111   222211   2248999


Q ss_pred             EEeCCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337          153 YFENVGG----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       153 vid~~g~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+.+...    ..+....+.|+|+|+++..|.
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            9876553    345678889999999998665

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=7.2e-05  Score=58.99  Aligned_cols=105  Identities=19%  Similarity=0.258  Sum_probs=68.4

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCC-------------ceeEecCChhh
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGF-------------DEAFNYKEEAD  137 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~-------------~~~~~~~~~~~  137 (269)
                      ..++++||++||=.|.  |.|.++..+|+..|.  +|+.++.+++..+.+++++..             ..-++.... +
T Consensus        92 ~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~-d  168 (324)
T d2b25a1          92 SMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK-D  168 (324)
T ss_dssp             HHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES-C
T ss_pred             HHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec-c
Confidence            4578999999999885  669999999999875  899999999988887754320             000110000 1


Q ss_pred             HHHHHHHHCCCCccEEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          138 LNAALKRYFPEGIDVYFENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       138 ~~~~i~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.........+.||.||--.+.  ..+..+.+.|+|||+++.+..
T Consensus       169 i~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P  213 (324)
T d2b25a1         169 ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  213 (324)
T ss_dssp             TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             hhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeC
Confidence            1111111112368876643343  678899999999999998743

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.56  E-value=0.00069  Score=45.81  Aligned_cols=75  Identities=19%  Similarity=0.112  Sum_probs=57.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|+|.|+ |.+|...++.+...|.+|++++.++++.+.+.++++.. ++..+.  ...+.+++..-..+|.++-+++.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~--~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDC--TKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCT--TSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcc--cchhhhhhcChhhhhhhcccCCcH
Confidence            6899998 99999999999999999999999999999887566654 443332  223344444334789999988873

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=97.55  E-value=8.1e-05  Score=57.71  Aligned_cols=103  Identities=10%  Similarity=-0.006  Sum_probs=70.9

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKR  144 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~  144 (269)
                      |.....+.++++||=+|+  |.|..+..+++..|++|++++.++...+.+++   ..|...   +...+-. ++     .
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~-~l-----~  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----P  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----S
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccc-cc-----c
Confidence            334467899999999997  56778888998889999999999988777663   234321   2222111 11     0


Q ss_pred             HCCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEecc
Q 024337          145 YFPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       145 ~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ...+.||+|+..-.-       ..+..+.+.|+|+|+++.....
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~  174 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  174 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEee
Confidence            112479999764321       4578899999999999887543

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.55  E-value=0.00019  Score=53.79  Aligned_cols=102  Identities=16%  Similarity=0.171  Sum_probs=70.5

Q ss_pred             HHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce--eEecCChhhHHHHHHH
Q 024337           70 GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKR  144 (269)
Q Consensus        70 ~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~i~~  144 (269)
                      .+.+.+.++++++||=+|+  |.|..+..+++. +.+|++++.|++..+.+++.   .+...  .+..+.. ++     .
T Consensus         7 ~l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~-~~-----~   77 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SL-----P   77 (234)
T ss_dssp             HHHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BC-----C
T ss_pred             HHHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccc-cc-----c
Confidence            3446788999999999997  668888888874 78999999999988777533   23321  1211111 10     0


Q ss_pred             HCCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          145 YFPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       145 ~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..++.||+|+.+-.-       ..++++.+.|+|+|+++....
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~~  120 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  120 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEEc
Confidence            123479999875442       357889999999999887643

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.53  E-value=5e-05  Score=56.69  Aligned_cols=97  Identities=13%  Similarity=0.142  Sum_probs=63.3

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHc--------CCceeEecCChhhHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLG-------CYVVGSAGSKDKVDLLKNKF--------GFDEAFNYKEEADLNA  140 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-------~~V~~~~~s~~~~~~~~~~~--------g~~~~~~~~~~~~~~~  140 (269)
                      .++++++||..|.  |.|+.++.+++..|       .+|+.+...++-.+.+++.+        +...+.-...  +..+
T Consensus        77 ~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~--d~~~  152 (223)
T d1r18a_          77 HLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG--DGRK  152 (223)
T ss_dssp             TCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES--CGGG
T ss_pred             ccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec--cccc
Confidence            7899999999995  66887777777653       38999999888776665332        2211111111  1110


Q ss_pred             HHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          141 ALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       141 ~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      ...  ..++||.|+-+.+- ...+..++.|+++|+++..
T Consensus       153 ~~~--~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         153 GYP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             CCG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccc--cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            000  11379988887775 4556778899999999874

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.52  E-value=0.00014  Score=54.79  Aligned_cols=93  Identities=17%  Similarity=0.144  Sum_probs=68.2

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+.++.+||=.|+  |.|..+..+++ .|++|++++.|++..+.++ +.+....+..+.. ++     ....+.||+|+.
T Consensus        39 ~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~  108 (246)
T d2avna1          39 YLKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLA  108 (246)
T ss_dssp             HCCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEE
T ss_pred             hcCCCCEEEEECC--CCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceee
Confidence            3567889999996  57888888876 5999999999999999999 5565545544332 21     112348999987


Q ss_pred             CCCc--------hhHhhhHhhhhcCCEEEEE
Q 024337          156 NVGG--------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       156 ~~g~--------~~~~~~~~~l~~~G~~v~~  178 (269)
                      ....        ..+....++|++||.++..
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            5442        3467888999999988764

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.49  E-value=0.00061  Score=48.77  Aligned_cols=90  Identities=16%  Similarity=0.124  Sum_probs=61.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE-------ecCC--hhhHHHHHHHHCCCCc
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF-------NYKE--EADLNAALKRYFPEGI  150 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~-------~~~~--~~~~~~~i~~~~~~~~  150 (269)
                      +++|.|.|+ |.+|++.+..+...|.+|++.++++++.+.++ +.+.....       ....  ..+..+.++     .+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~a   73 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DA   73 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHT-----TC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CC
Confidence            368999999 99999999999999999999999999998887 55532110       0000  003334343     48


Q ss_pred             cEEEeCCCchhHhhhH----hhhhcCCEEE
Q 024337          151 DVYFENVGGKTLDAVL----PNMKIRGRIA  176 (269)
Q Consensus       151 d~vid~~g~~~~~~~~----~~l~~~G~~v  176 (269)
                      |++|-|+........+    ..+.++-.++
T Consensus        74 D~iii~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          74 DVILIVVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             SEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             CEEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence            9999999875444444    4444444444

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=97.41  E-value=0.0003  Score=52.49  Aligned_cols=100  Identities=15%  Similarity=0.167  Sum_probs=69.0

Q ss_pred             HHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce--eEecCChhhHHHHHHHHC
Q 024337           72 YEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        72 ~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~i~~~~  146 (269)
                      .+.++++++++||=.|+  |.|..+..+++ .|.+|++++.|++..+.+++.   .+...  .+..+.. ++     ...
T Consensus         8 l~~~~l~~~~rVLDiGc--G~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~l-----~~~   78 (231)
T d1vl5a_           8 MQIAALKGNEEVLDVAT--GGGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PFT   78 (231)
T ss_dssp             HHHHTCCSCCEEEEETC--TTCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CSC
T ss_pred             HHhcCCCCcCEEEEecc--cCcHHHHHHHH-hCCEEEEEECCHHHHhhhhhcccccccccccccccccc-cc-----ccc
Confidence            36688999999999997  46777777775 478999999999988777532   34332  2222211 11     112


Q ss_pred             CCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .+.||+|+..-.-       ..+.++.+.|+|+|+++....
T Consensus        79 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          79 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            2479999865442       457889999999999998644

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.40  E-value=0.00023  Score=54.33  Aligned_cols=80  Identities=19%  Similarity=0.165  Sum_probs=53.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHcC---C-ce----eEecCChhhH---HHHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKL---LGCYVVGSAGSKDKVDLLKNKFG---F-DE----AFNYKEEADL---NAALKR  144 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~---~G~~V~~~~~s~~~~~~~~~~~g---~-~~----~~~~~~~~~~---~~~i~~  144 (269)
                      .|+.++|+||++|+|.++++.+..   .|++|+.+++++++.+.+.+++.   . ..    ..|..+..+.   .+.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999988876543   69999999999998877654432   1 11    2355554122   222333


Q ss_pred             HC--CC-CccEEEeCCC
Q 024337          145 YF--PE-GIDVYFENVG  158 (269)
Q Consensus       145 ~~--~~-~~d~vid~~g  158 (269)
                      ..  .+ ..|++++++|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            22  22 6788988876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.40  E-value=0.00041  Score=49.31  Aligned_cols=93  Identities=14%  Similarity=0.036  Sum_probs=63.0

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCCccEE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ..++++|+|.|+ ||++.+++..+...+.+|+++.|+.++.+.+.+.++..   .....+.          .....+|++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----------~~~~~~dii   83 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----------IPLQTYDLV   83 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----------CCCSCCSEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc----------cccccccee
Confidence            357889999998 99999999888877779999999999988776566532   1222111          111369999


Q ss_pred             EeCCCch----hHhhhHhhhhcCCEEEEEec
Q 024337          154 FENVGGK----TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       154 id~~g~~----~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++|++..    ........++++..++.+..
T Consensus        84 IN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          84 INATSAGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             EECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred             eecccccccccccchhhhhhcccceeeeeec
Confidence            9999842    12223445666776666543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.39  E-value=0.00048  Score=52.62  Aligned_cols=82  Identities=11%  Similarity=0.225  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCCce---eEecCChh---hHHHHHHHHCC
Q 024337           77 AKHGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGFDE---AFNYKEEA---DLNAALKRYFP  147 (269)
Q Consensus        77 ~~~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~g~~~---~~~~~~~~---~~~~~i~~~~~  147 (269)
                      +-+|+++||+||+  .|+|.++++.+...|++|+.++++.++. +.+.++++...   ..|..+.+   +..+.+.+..+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            3468999999954  5799999999999999999999887765 44444565432   23444431   23344444332


Q ss_pred             --CCccEEEeCCC
Q 024337          148 --EGIDVYFENVG  158 (269)
Q Consensus       148 --~~~d~vid~~g  158 (269)
                        ++.|++++++|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence              37899999987

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00056  Score=51.97  Aligned_cols=82  Identities=11%  Similarity=0.171  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeE--ecCChhhHHHHHHHHC--CC
Q 024337           78 KHGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAF--NYKEEADLNAALKRYF--PE  148 (269)
Q Consensus        78 ~~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~--~~~~~~~~~~~i~~~~--~~  148 (269)
                      -+|+++||+||++  |+|.+++..+...|++|+.++++++..+.+++   ..+....+  +..+..+......+..  .+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            4689999999988  79999999999999999999988665444432   33333322  2222212233333332  23


Q ss_pred             CccEEEeCCCc
Q 024337          149 GIDVYFENVGG  159 (269)
Q Consensus       149 ~~d~vid~~g~  159 (269)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            78999988753

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00017  Score=53.98  Aligned_cols=100  Identities=7%  Similarity=-0.079  Sum_probs=67.1

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEE-E
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVY-F  154 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~v-i  154 (269)
                      ..+|.+||-+|+  |.|..+..+++..+.+|++++.+++..+.+++.+... ..+..... +..........+.||.+ +
T Consensus        51 ~~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEeec--cchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence            467899999996  7788888998877779999999999999988443221 11111111 23333333334589977 5


Q ss_pred             eCCCc-----------hhHhhhHhhhhcCCEEEEEe
Q 024337          155 ENVGG-----------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       155 d~~g~-----------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      |....           ..+..+.+.|+|||+++...
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            65542           13567889999999998653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.32  E-value=0.0011  Score=46.69  Aligned_cols=85  Identities=13%  Similarity=0.201  Sum_probs=59.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|.|.|. |.+|...++.++..|.+|++.++++++.+.++ +.+. +...+..      +.+     ...|+||-|+...
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~~------~~~-----~~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDL------SLL-----QTAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCG------GGG-----TTCSEEEECSCHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeeec------ccc-----cccccccccCcHh
Confidence            6889998 99999999999999999999999999999888 7775 3332211      112     1489999998754


Q ss_pred             hH----hhhHhhhhcCCEEEEEe
Q 024337          161 TL----DAVLPNMKIRGRIAACG  179 (269)
Q Consensus       161 ~~----~~~~~~l~~~G~~v~~g  179 (269)
                      ..    +.....++++-.++.++
T Consensus        69 ~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          69 LILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             hhhhhhhhhhhhcccccceeecc
Confidence            33    34444444455555443

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00082  Score=50.09  Aligned_cols=104  Identities=16%  Similarity=0.138  Sum_probs=68.7

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee------------EecCCh-----
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA------------FNYKEE-----  135 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~------------~~~~~~-----  135 (269)
                      ....+.++.+||..|+  |.|..+..+++ .|++|++++.|++.++.++++.+....            ......     
T Consensus        39 ~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            3346788999999997  55888888887 599999999999999888755443211            000000     


Q ss_pred             -hhHHHHHHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          136 -ADLNAALKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       136 -~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       .++.+ +.....+.||+|+++.--         ..+....++|+|+|+++....
T Consensus       116 ~~d~~~-l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CCSIFD-LPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ESCGGG-GGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             Ecchhh-ccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence             01100 111112379999987642         245778999999999876654

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=97.18  E-value=0.0024  Score=47.37  Aligned_cols=105  Identities=13%  Similarity=0.091  Sum_probs=72.8

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      |....+....++||-+|  +++|..++.+|+.+  +.+|+.+..+++..+.+++   +.|....+..... +..+.+.++
T Consensus        51 L~~L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l  127 (227)
T d1susa1          51 LSMLLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEM  127 (227)
T ss_dssp             HHHHHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHH
T ss_pred             HHHHHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHH
Confidence            43445667789999999  58899999999887  4699999999988777664   3466543333332 334444433


Q ss_pred             -----CCCCccEEE-eCCCc---hhHhhhHhhhhcCCEEEEE
Q 024337          146 -----FPEGIDVYF-ENVGG---KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       146 -----~~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~  178 (269)
                           ..+.||.|| |+--.   ..++.++++|+++|.++.=
T Consensus       128 ~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         128 IKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             HHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             HhccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence                 234799765 55443   5678999999999987753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.003  Score=45.52  Aligned_cols=40  Identities=25%  Similarity=0.232  Sum_probs=35.7

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      ++|.|.|+ |.+|...++++...|.+|+..+++++..+.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            58999999 99999999999999999999999988766554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.14  E-value=0.0007  Score=50.38  Aligned_cols=72  Identities=22%  Similarity=0.194  Sum_probs=47.9

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .+|||+||+|.+|..++..+...|.  .|+...|++++...+.  -+... ..|..+..++.+.+     .++|.++.++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF-----QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeecccccccccc-----ccceeeEEEE
Confidence            6899999999999999999988885  6777788877655443  12222 23333321222222     2589999987


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      +.
T Consensus        77 ~~   78 (252)
T d2q46a1          77 SA   78 (252)
T ss_dssp             CC
T ss_pred             ee
Confidence            63

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0036  Score=43.46  Aligned_cols=101  Identities=15%  Similarity=0.181  Sum_probs=71.3

Q ss_pred             hHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHH
Q 024337           66 TAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR  144 (269)
Q Consensus        66 ~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~  144 (269)
                      +.+.++.+..+ .-.|++++|.|- |-+|.-.++.++.+|++|++++..+.+.-.+. .-|.. +.      .+.+.+. 
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~-v~------~~~~a~~-   78 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYE-VT------TMDEACQ-   78 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT-
T ss_pred             hHHHHHHHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceE-ee------ehhhhhh-
Confidence            34455545444 458999999997 99999999999999999999998876544443 33432 21      2222222 


Q ss_pred             HCCCCccEEEeCCCc-h-hHhhhHhhhhcCCEEEEEec
Q 024337          145 YFPEGIDVYFENVGG-K-TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       145 ~~~~~~d~vid~~g~-~-~~~~~~~~l~~~G~~v~~g~  180 (269)
                          ..|+++-|+|. . .-.+.++.|+++..+..+|-
T Consensus        79 ----~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          79 ----EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             ----TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             ----hccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence                37999999997 3 34577888888887777665

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.12  E-value=0.0016  Score=49.41  Aligned_cols=36  Identities=14%  Similarity=0.147  Sum_probs=32.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK  116 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~  116 (269)
                      ...||+||++|+|.++++.+...|++|+.++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            357999999999999999999999999999987554

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.09  E-value=0.0028  Score=47.53  Aligned_cols=94  Identities=16%  Similarity=0.092  Sum_probs=65.1

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-eeEecCChhhHHHHHHHHC-C
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEADLNAALKRYF-P  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~i~~~~-~  147 (269)
                      ......++++||=.|+  |.|..+..+++ .|++|++++.|++..+.+++++   +.. ..+..+-        .++. +
T Consensus        35 ~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~--------~~l~~~  103 (251)
T d1wzna1          35 KEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV--------LEIAFK  103 (251)
T ss_dssp             HHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG--------GGCCCC
T ss_pred             HHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhh--------hhcccc
Confidence            3345677889999997  45888887776 5899999999999888887433   221 2222221        2222 2


Q ss_pred             CCccEEEeCCCc----------hhHhhhHhhhhcCCEEEE
Q 024337          148 EGIDVYFENVGG----------KTLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       148 ~~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~  177 (269)
                      +.||+|+...+.          ..++.+.+.|+|+|.++.
T Consensus       104 ~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            379999876432          246778899999998875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=97.04  E-value=0.012  Score=40.19  Aligned_cols=95  Identities=19%  Similarity=0.186  Sum_probs=63.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCC--HHHH-HHHHHHcCCceeEecCChhhHHHHHHH-----------
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGS--KDKV-DLLKNKFGFDEAFNYKEEADLNAALKR-----------  144 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s--~~~~-~~~~~~~g~~~~~~~~~~~~~~~~i~~-----------  144 (269)
                      ++|.|+|+||.+|..+.++.+..  .++|++..-.  -+.+ +.++ +|....++-.++.  ..+.+.+           
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~-ef~Pk~v~i~d~~--~~~~l~~~~~~~~~~v~~   79 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK-RTNAKRAVIADPS--LYNDLKEALAGSSVEAAA   79 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH-HTTCSEEEESCGG--GHHHHHHHTTTCSSEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH-hhccccceeccHH--HHHHHHHHhhhccccccc
Confidence            78999999999999999999886  4577766633  2233 3344 7777665433331  1112211           


Q ss_pred             -------HCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          145 -------YFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       145 -------~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                             .....+|+++.+..+ ..+...+..++.+-++.+.
T Consensus        80 g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          80 GADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             SHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             CccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence                   111258888888665 7888888888888776654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.99  E-value=0.0035  Score=43.30  Aligned_cols=85  Identities=12%  Similarity=0.146  Sum_probs=64.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchh
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT  161 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  161 (269)
                      +|.+.|+ |.+|.+.+.-+...|.++++..++.++.+.+.+++|....-      +..+.+.     ..|+||=|+....
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL   69 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence            5788898 99999888877777889999999999888876578865321      2333333     4899999998777


Q ss_pred             HhhhHhhhhcCCEEEEE
Q 024337          162 LDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       162 ~~~~~~~l~~~G~~v~~  178 (269)
                      +...++.++++..++.+
T Consensus        70 ~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          70 FETVLKPLHFKQPIISM   86 (152)
T ss_dssp             HHHHHTTSCCCSCEEEC
T ss_pred             HHHHhhhcccceeEecc
Confidence            77888888887777655

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.98  E-value=0.00055  Score=50.93  Aligned_cols=101  Identities=17%  Similarity=0.115  Sum_probs=68.8

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCC-c--eeEecCChhhHHHHHHHHCCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGF-D--EAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ...++||++||=.|+  |.|..+..+++..|.  +|++++.+++..+.+++.... .  ..+..+.  ....... ...+
T Consensus        68 ~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~--~~~~~~~-~~~~  142 (227)
T d1g8aa_          68 NFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TKPEEYR-ALVP  142 (227)
T ss_dssp             CCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TCGGGGT-TTCC
T ss_pred             ccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC--CCccccc-cccc
Confidence            357899999999997  668889999998864  999999999988887744322 1  1121111  1111111 1123


Q ss_pred             CccEEEeCCCc-----hhHhhhHhhhhcCCEEEEEe
Q 024337          149 GIDVYFENVGG-----KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       149 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .+|+++.....     ..+..+.+.|+++|+++++-
T Consensus       143 ~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            68988765542     35788899999999988763

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.98  E-value=0.0038  Score=43.10  Aligned_cols=83  Identities=18%  Similarity=0.242  Sum_probs=58.1

Q ss_pred             EEEEecCcchHHHHHHHH-HHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQF-AKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~-a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|.+.|+ |.+|.+.++- .+.-+.+|++.++++++.+.+.+++|... .+..+  .    +     ...|++|=|+...
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~--~----v-----~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLP--E----L-----HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC--C----C-----CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-ccccc--c----c-----cccceEEEecCHH
Confidence            5888998 9999988774 45434799999999999988875677642 22111  1    1     1478999888766


Q ss_pred             hHhhhHhhhhcCCEEEE
Q 024337          161 TLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       161 ~~~~~~~~l~~~G~~v~  177 (269)
                      .+...++.+++.++++.
T Consensus        69 ~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          69 DMEAACKNIRTNGALVL   85 (152)
T ss_dssp             HHHHHHTTCCCTTCEEE
T ss_pred             HHHHhHHHHhhcccEEe
Confidence            66666766766665543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.97  E-value=0.0014  Score=50.65  Aligned_cols=38  Identities=16%  Similarity=0.169  Sum_probs=33.7

Q ss_pred             CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024337           79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDK  116 (269)
Q Consensus        79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~  116 (269)
                      +|+++||+||+|  |+|.++++.+...|++|+++.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            688999999876  89999999999999999999876543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.96  E-value=0.002  Score=47.43  Aligned_cols=94  Identities=18%  Similarity=0.095  Sum_probs=63.8

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-eeEecCChhhHHHHHHHHCCCCcc
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      .++++++||-+|+  |.|..+..+++ .|.+|++++.|++..+.+++.+   +.. ..+..+.. ++     ...++.||
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l-----~~~~~~fD  104 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KL-----SFEDKTFD  104 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SC-----CSCTTCEE
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-cc-----cccCcCce
Confidence            3688999999997  55888888887 4899999999999888776432   322 12222111 11     01123799


Q ss_pred             EEEeCCCc---------hhHhhhHhhhhcCCEEEEE
Q 024337          152 VYFENVGG---------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       152 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~  178 (269)
                      +|+....-         ..+..+.+.|+|||+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            98765431         2467788999999998765

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.96  E-value=0.00062  Score=52.79  Aligned_cols=97  Identities=11%  Similarity=0.005  Sum_probs=64.1

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-----eeEecCChhhHHHHHHHHC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-----EAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-----~~~~~~~~~~~~~~i~~~~  146 (269)
                      .+.+++.+||-+|+  |.|..++.+++. |++|++++.|++.++.++++.   +..     ..+..-   ++...-....
T Consensus        52 l~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  125 (292)
T d1xvaa_          52 LRQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NWLTLDKDVP  125 (292)
T ss_dssp             HHHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CGGGHHHHSC
T ss_pred             hhhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cccccccccC
Confidence            44466789999997  678888888875 899999999999888776332   111     011111   1111112222


Q ss_pred             C-CCccEEEeCCCc---------------hhHhhhHhhhhcCCEEEE
Q 024337          147 P-EGIDVYFENVGG---------------KTLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       147 ~-~~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~  177 (269)
                      . ++||.|+.....               ..++.+.+.|+|+|.++.
T Consensus       126 ~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         126 AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             CTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            2 389999864321               157889999999999886

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0052  Score=48.25  Aligned_cols=101  Identities=20%  Similarity=0.227  Sum_probs=69.1

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH----------cCCc----eeEe--cC
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNK----------FGFD----EAFN--YK  133 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~----------~g~~----~~~~--~~  133 (269)
                      +.+..+++++++|+-.|.  |.|..+.++|+..++ ++++++.+++..+.+++.          +|..    ..+.  ..
T Consensus       143 ~~~~~~l~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            335678999999999995  889999999999988 899999999877766521          1221    1222  22


Q ss_pred             ChhhHHHHHHHHCCCCccEEEeCCC---c---hhHhhhHhhhhcCCEEEEEe
Q 024337          134 EEADLNAALKRYFPEGIDVYFENVG---G---KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +. ++.+.+.+     +|+|+-..-   .   ..+.+..+.|++||++|..-
T Consensus       221 ~~-~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SE-EWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SH-HHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cc-ccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            22 34443332     577764322   1   35677888999999999764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.00081  Score=42.42  Aligned_cols=36  Identities=19%  Similarity=0.100  Sum_probs=32.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ++++|+|+|. |.+|+++++++..+|++|++.+.+..
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            4778999999 99999999999999999999997543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.93  E-value=0.0011  Score=51.01  Aligned_cols=39  Identities=13%  Similarity=0.146  Sum_probs=31.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLL  120 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~  120 (269)
                      .++|+||++|+|.++++.+...|++|++++++ +++.+.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~   43 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   43 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence            46899999999999999999999999987754 4444433

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.90  E-value=0.0022  Score=51.76  Aligned_cols=104  Identities=25%  Similarity=0.316  Sum_probs=69.1

Q ss_pred             HHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc----------CCc---eeEecC
Q 024337           68 YVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKF----------GFD---EAFNYK  133 (269)
Q Consensus        68 ~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~----------g~~---~~~~~~  133 (269)
                      ...+ +..+++++++++=+|+  |+|..+.++|+..|+ +|++++.++...+.+++..          +..   ..+...
T Consensus       206 ~~Il-~~l~Lkpgd~fLDLGC--G~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         206 SDVY-QQCQLKKGDTFMDLGS--GVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHH-HHTTCCTTCEEEEESC--TTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHH-HHhCCCCCCEEEeCCC--CCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            3344 5678999999999995  889999999999997 8999999998877765321          111   111111


Q ss_pred             C----hhhHHHHHHHHCCCCccEEEeCCC---c---hhHhhhHhhhhcCCEEEEEe
Q 024337          134 E----EADLNAALKRYFPEGIDVYFENVG---G---KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       134 ~----~~~~~~~i~~~~~~~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .    . +......    ..+|+++-...   .   ..+.+..+.|++||++|...
T Consensus       283 ~~f~~~-~~~d~~~----~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDN-NRVAELI----PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTC-HHHHHHG----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhc-ccccccc----ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            1    1 2222211    13677764321   1   45778889999999999764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.88  E-value=0.0052  Score=43.18  Aligned_cols=88  Identities=11%  Similarity=0.080  Sum_probs=60.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|+|.|. |.+|...+..++..|.  +|++.+++++..+.++ +.+.- .......  .    ..   ....|+++-|+.
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~--~----~~---~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIA--K----VE---DFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGG--G----GG---GTCCSEEEECSC
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhh--h----hh---ccccccccccCC
Confidence            6999997 9999999999998885  8999999999999998 77763 3322111  0    00   014788888888


Q ss_pred             ch----hHhhhHhhhhcCCEEEEEec
Q 024337          159 GK----TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~~----~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..    .+....+.+.++..++.++.
T Consensus        72 ~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             chhhhhhhhhhhcccccccccccccc
Confidence            53    33444455555666655544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.86  E-value=0.0032  Score=41.12  Aligned_cols=89  Identities=11%  Similarity=-0.000  Sum_probs=60.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCceeEe--cCChhhHHHHHHHHCCCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFDEAFN--YKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~~~~~--~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      .+++|||.|+ |.+|..-++.+...|++|++++....  ...++. +-+. ....  +... +    +     .++++++
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~~~i-~~~~~~~~~~-d----l-----~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGML-TLVEGPFDET-L----L-----DSCWLAI   77 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSC-EEEESSCCGG-G----G-----TTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-cCCc-eeeccCCCHH-H----h-----CCCcEEe
Confidence            4789999999 99999999999999999988875433  222222 2222 1221  1111 1    1     2589999


Q ss_pred             eCCCchhH-hhhHhhhhcCCEEEEEec
Q 024337          155 ENVGGKTL-DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       155 d~~g~~~~-~~~~~~l~~~G~~v~~g~  180 (269)
                      -+++...+ .......++.|.+|.+..
T Consensus        78 ~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             ecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            99987544 567778888999998755

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.84  E-value=0.0028  Score=45.89  Aligned_cols=86  Identities=21%  Similarity=0.193  Sum_probs=61.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|.+|.|+|- |.+|..++++++.+|++|++.++..+....   ..+..    .  . ++.+.+++     .|+++-++.
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~~----~--~-~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYY----V--D-SLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCB----C--S-CHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccc---cceee----e--c-cccccccc-----cccccccCC
Confidence            4789999998 999999999999999999999866443222   11211    1  1 45555554     799988876


Q ss_pred             c--h---h-HhhhHhhhhcCCEEEEEec
Q 024337          159 G--K---T-LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~---~-~~~~~~~l~~~G~~v~~g~  180 (269)
                      .  .   . -...+..|+++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHHhhhCCccEEEecCc
Confidence            3  2   1 2567888888888888755

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.82  E-value=0.019  Score=39.23  Aligned_cols=96  Identities=15%  Similarity=0.107  Sum_probs=64.1

Q ss_pred             CEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCC--HHHH-HHHHHHcCCceeEecCChhhH---HH------------
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGS--KDKV-DLLKNKFGFDEAFNYKEEADL---NA------------  140 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s--~~~~-~~~~~~~g~~~~~~~~~~~~~---~~------------  140 (269)
                      ++|.|+|+||++|..+..+.+..  .++|++.+-.  -+.+ +.+. +|...+++-.++. ..   ..            
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~-~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~   79 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCL-EFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVL   79 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHH-HHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHH-HHhhcccccccHH-HHHHHHHHhhhhccccccc
Confidence            47999999999999999999987  3577766633  2233 3344 7887766544432 11   11            


Q ss_pred             ----HHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337          141 ----ALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       141 ----~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                          .+.+.... ++|+++.+..+ ..+...+..++.+-++.+.
T Consensus        80 ~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          80 SGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             ESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             cChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence                12222222 68999998876 7888888888887776654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.76  E-value=0.0041  Score=41.82  Aligned_cols=72  Identities=15%  Similarity=0.169  Sum_probs=53.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE-ecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +++|.|+ |.+|..+++.+...|.+|++++.++++.+.++ ..+...++ |..+. +.   +.+..-..+|.++-+++.
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~~---l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-NE---LLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-TH---HHHHTGGGCSEEEECCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-hh---hhccCCccccEEEEEcCc
Confidence            4778898 99999999999999999999999999999988 67764432 33332 32   333321258888888875

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0037  Score=46.00  Aligned_cols=105  Identities=11%  Similarity=0.044  Sum_probs=71.4

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      |....+....++||-+|  ++.|..++.+|+.+  +.+|+.++.+++..+.+++   +.|....+..... +..+.+.+.
T Consensus        51 L~~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~  127 (219)
T d2avda1          51 LANLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDEL  127 (219)
T ss_dssp             HHHHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHH
T ss_pred             HHHHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhh
Confidence            33456677889999999  58899999999876  5699999999888776664   3455443332222 333333322


Q ss_pred             ----CCCCccEEEeCCC-c---hhHhhhHhhhhcCCEEEEE
Q 024337          146 ----FPEGIDVYFENVG-G---KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       146 ----~~~~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~  178 (269)
                          ..+.||.||--.. .   ..++.+++.|++||.++.=
T Consensus       128 ~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         128 LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence                2347997765444 2   4578899999999988763

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.74  E-value=0.0013  Score=48.29  Aligned_cols=101  Identities=13%  Similarity=0.094  Sum_probs=64.9

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ..++||++||=.|+  |.|..+..+++..+. +|++++.+++..+.+++..   +....+-.+.. . ..... .....+
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~-~~~~~-~~~~~v  126 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-K-PWKYS-GIVEKV  126 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-C-GGGTT-TTCCCE
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-C-ccccc-cccceE
Confidence            56899999999997  456677777877653 9999999999887775332   22111111111 1 00000 011267


Q ss_pred             cEEEeCCCc-----hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFENVGG-----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+++.....     ..+.++.+.|+++|+++.+..
T Consensus       127 d~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  161 (209)
T d1nt2a_         127 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVK  161 (209)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEecccChhhHHHHHHHHHHHhccCCeEEEEEE
Confidence            888765532     357788899999999987643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.70  E-value=0.00081  Score=50.36  Aligned_cols=37  Identities=14%  Similarity=0.169  Sum_probs=33.6

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK  116 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~  116 (269)
                      ++++||+||++|+|.++++.+...|++|++++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            4789999999999999999999999999999987653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.67  E-value=0.0026  Score=49.76  Aligned_cols=74  Identities=20%  Similarity=0.301  Sum_probs=47.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHHcCCcee--EecCChhhHHHHHHHHCCCCccEEE
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAG-----SKDKVDLLKNKFGFDEA--FNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-----s~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +|||+||+|-+|...+..+...|.+|+++++     ..++...+. ..+--..  .|..+..++.+.++..   ++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~---~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc---CCceEE
Confidence            6999999999999999999888999999863     222333444 3322222  2333331333333322   689999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      .+++.
T Consensus        78 h~aa~   82 (338)
T d1orra_          78 HLAGQ   82 (338)
T ss_dssp             ECCCC
T ss_pred             eeccc
Confidence            99863

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.64  E-value=0.0081  Score=42.92  Aligned_cols=40  Identities=10%  Similarity=0.033  Sum_probs=35.2

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      ++|.|.|+ |.+|...+.++...|.+|+..+++++..+...
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            57999999 99999999999999999999999988766544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.64  E-value=0.00053  Score=54.54  Aligned_cols=78  Identities=15%  Similarity=0.257  Sum_probs=51.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----Cce-eEecCChhhHHHHHHHHCCCCccEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ++++|||+||+|-+|..+++.+...|.+|++++++..+...+.+...    ... ..|..+...+.+.++.   ..+|++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~---~~~~~v   83 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE---FQPEIV   83 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhh---chhhhh
Confidence            57999999999999999999999999999999987653322211221    211 2233333122222222   168999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      +.+++.
T Consensus        84 ~~~aa~   89 (356)
T d1rkxa_          84 FHMAAQ   89 (356)
T ss_dssp             EECCSC
T ss_pred             hhhhcc
Confidence            998874

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0029  Score=48.23  Aligned_cols=96  Identities=13%  Similarity=0.078  Sum_probs=68.4

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ..++.+||-.|+  |.|..+..+++.. +.++++++.|++..+.+++...-...+..+.. ++     ....+.||+|+.
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence            357789999996  6678888888775 67999999999999998844322222222211 11     011237999997


Q ss_pred             CCCchhHhhhHhhhhcCCEEEEEec
Q 024337          156 NVGGKTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ......+.+..+.|+|+|.++....
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEee
Confidence            7666778999999999999998754

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.61  E-value=0.00062  Score=49.40  Aligned_cols=101  Identities=12%  Similarity=0.069  Sum_probs=65.1

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce-eEecCChhhHHHHHHHHC
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEADLNAALKRYF  146 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~-~~~~~~~~~~~~~i~~~~  146 (269)
                      |.+.....++++||-.|+  |.|..++.+++ .+.+|++++.++...+.+++++   +... .+..... ++.+   ...
T Consensus        44 Li~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~-d~~~---~~~  116 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-DLYE---NVK  116 (194)
T ss_dssp             HHHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-STTT---TCT
T ss_pred             HHHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc-chhh---hhc
Confidence            435567889999999996  66777777765 5679999999999888876432   3321 1111111 1111   112


Q ss_pred             CCCccEEEeCCC----c----hhHhhhHhhhhcCCEEEEE
Q 024337          147 PEGIDVYFENVG----G----KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       147 ~~~~d~vid~~g----~----~~~~~~~~~l~~~G~~v~~  178 (269)
                      ++.||+|+....    .    ..++.+.+.|+++|+++..
T Consensus       117 ~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            347999987432    2    2367788899999988654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.59  E-value=0.0034  Score=50.50  Aligned_cols=32  Identities=16%  Similarity=0.084  Sum_probs=29.5

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA  111 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~  111 (269)
                      |++|||+||+|=+|..+++.+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67999999999999999999999999999987

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.58  E-value=0.0028  Score=50.01  Aligned_cols=46  Identities=28%  Similarity=0.283  Sum_probs=40.0

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      -+.+|++|||+||+|=+|...++.+...|.+|+++.|+.++...++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            3678999999999999999999988888999999999887766554

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.57  E-value=0.019  Score=39.59  Aligned_cols=99  Identities=20%  Similarity=0.141  Sum_probs=70.7

Q ss_pred             HHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC
Q 024337           68 YVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        68 ~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~  146 (269)
                      +.++.+..+ +-.|++++|.|= |-+|.-.++.++.+|++|+++..++-+.-++. -=|. .+.      ...+.++   
T Consensus        10 ~d~i~r~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~~---   77 (163)
T d1v8ba1          10 PDGLMRATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIVD---   77 (163)
T ss_dssp             HHHHHHHHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHTT---
T ss_pred             HHHHHHHhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHccc---
Confidence            334434333 468999999998 99999999999999999999998886543332 2222 122      3333332   


Q ss_pred             CCCccEEEeCCCch--hHhhhHhhhhcCCEEEEEec
Q 024337          147 PEGIDVYFENVGGK--TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       147 ~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  180 (269)
                        ..|+++-++|..  .-...++.|+.+..+..+|-
T Consensus        78 --~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          78 --KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             --TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             --cCcEEEEcCCCCccccHHHHHHhhCCeEEEeccc
Confidence              479999999983  34567888999888887765

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.57  E-value=0.0044  Score=48.57  Aligned_cols=102  Identities=17%  Similarity=0.168  Sum_probs=65.9

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHH--CCCC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY--FPEG  149 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~--~~~~  149 (269)
                      .++++++||=.++  ++|..++.+++. |+ +|+.++.+++..+.++++   .|....+..... +..+.+...  .+.+
T Consensus       142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence            3688999998875  556666666655 66 899999999988887653   344321221122 333333332  2338


Q ss_pred             ccEEEeCCCc----------------hhHhhhHhhhhcCCEEEEEecc
Q 024337          150 IDVYFENVGG----------------KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       150 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ||+|+--.+.                ..+..+.++|++||.++.+...
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            9988753321                1356788899999999988653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.57  E-value=0.0099  Score=46.58  Aligned_cols=39  Identities=8%  Similarity=-0.054  Sum_probs=32.4

Q ss_pred             CCEEEEec--CcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 024337           80 GECVFISA--ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD  118 (269)
Q Consensus        80 ~~~vlI~g--a~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~  118 (269)
                      ++..||+|  ++.|+|.++++.+...|++|+.+.++.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            57789999  4469999999999999999999987665433

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.56  E-value=0.0067  Score=40.83  Aligned_cols=32  Identities=16%  Similarity=0.053  Sum_probs=25.2

Q ss_pred             EEEEecCcchHHHHHHHHHHH-cCCEEEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKL-LGCYVVGSAGS  113 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s  113 (269)
                      +|.|.|++|-+|...++.... .++++......
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~   33 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA   33 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            589999999999998888765 46677766544

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.54  E-value=0.0024  Score=47.52  Aligned_cols=102  Identities=14%  Similarity=0.022  Sum_probs=65.5

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCC---ceeEecCChhhHHHHHHHHCCCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEADLNAALKRYFPEG  149 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~~~  149 (269)
                      ...++||++||=+|+  |.|..+..+++.. +..|++++.|+...+.+++....   ...+..+.. .. ...... ...
T Consensus        69 ~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~~~-~~~  143 (230)
T d1g8sa_          69 VMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KP-QEYANI-VEK  143 (230)
T ss_dssp             CCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CG-GGGTTT-CCC
T ss_pred             hCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cC-cccccc-cce
Confidence            456899999999998  5577777888764 34999999999988888733222   112222221 11 111111 114


Q ss_pred             ccEEEeCCCc-----hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG-----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +|+++.....     ..+..+.+.|+++|+++..-.
T Consensus       144 v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k  179 (230)
T d1g8sa_         144 VDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIK  179 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEeeccccchHHHHHHHHHHHHhcccCceEEEEee
Confidence            6667665542     347788899999999887643

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=96.54  E-value=0.00081  Score=49.92  Aligned_cols=97  Identities=9%  Similarity=0.067  Sum_probs=65.8

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKL---LGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~---~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ++++.+||-+|+  |.|..+..+++.   .+++|++++.|++.++.+++.+   +....+..... +.    .+...+.+
T Consensus        37 ~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d~----~~~~~~~~  109 (225)
T d1im8a_          37 VTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-DI----RHVEIKNA  109 (225)
T ss_dssp             CCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-CT----TTCCCCSE
T ss_pred             cCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-hh----hccccccc
Confidence            689999999997  668888888875   4789999999999999887543   22211211111 11    12222367


Q ss_pred             cEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+++.+..-         ..++.+.+.|+|+|.++....
T Consensus       110 d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~  148 (225)
T d1im8a_         110 SMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK  148 (225)
T ss_dssp             EEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeeEEeeeccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence            777664432         347889999999999998643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.52  E-value=0.0028  Score=45.50  Aligned_cols=43  Identities=16%  Similarity=0.241  Sum_probs=37.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF  124 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~  124 (269)
                      +|.|+||+|++|.+.++.+...|.+|++..|++++.+.+.+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            6889988899999999999999999999999999877665444

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.51  E-value=0.00041  Score=52.84  Aligned_cols=96  Identities=19%  Similarity=0.092  Sum_probs=66.1

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ..+++|++||-.++  |+|..++.+|+.-+++|++++.+++..+.++++.   +..   .+++.+..        +..+.
T Consensus       103 ~~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~--------~~~~~  172 (260)
T d2frna1         103 KVAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR--------DFPGE  172 (260)
T ss_dssp             HHCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT--------TCCCC
T ss_pred             hhcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH--------HhccC
Confidence            34789999999986  6778888888875569999999999888886533   443   23333321        22223


Q ss_pred             -CccEEE-eCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337          149 -GIDVYF-ENVGG--KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 -~~d~vi-d~~g~--~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       .+|.|+ +.-..  ..+..+++.++++|.+.....
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence             789655 43332  677889999999997765543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00054  Score=51.21  Aligned_cols=75  Identities=23%  Similarity=0.231  Sum_probs=47.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      ++.+|||+||||-+|...++.+...|.  +|++++|++.+...-. .-.... ..|..+.    +.+.+.. .++|+++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~----~~~~~~~-~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAF-QGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGG-SSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccc----ccccccc-cccccccc
Confidence            357899999999999999999988786  8999998654322211 111111 2233221    1222222 25899999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      |+|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9985

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.49  E-value=0.017  Score=40.04  Aligned_cols=86  Identities=14%  Similarity=0.106  Sum_probs=62.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-h
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-K  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~  160 (269)
                      +|.|.|. |.+|...++-+...|.+|++.++++++.+.++ +.+....   .   +..+.+++     .|++|-|+.. .
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~~---~---~~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAETA---S---TAKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC---S---SHHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhhc---c---cHHHHHhC-----CCeEEEEcCCHH
Confidence            5888997 99999999988889999999999999999888 7766321   1   33344443     7999999975 3


Q ss_pred             hHhh-------hHhhhhcCCEEEEEec
Q 024337          161 TLDA-------VLPNMKIRGRIAACGM  180 (269)
Q Consensus       161 ~~~~-------~~~~l~~~G~~v~~g~  180 (269)
                      ..+.       ....++++..++.++.
T Consensus        69 ~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCCcchhhccCCCCEEEECCC
Confidence            3322       3445556666766655

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=96.43  E-value=0.0081  Score=45.25  Aligned_cols=97  Identities=10%  Similarity=0.007  Sum_probs=68.0

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC--CCCccEEE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF--PEGIDVYF  154 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~--~~~~d~vi  154 (269)
                      ..++.+||=.|+  |+|..+..+++....+|++++.+++.++.+++.+.....+++... +    +.+..  ++.||+|+
T Consensus        91 ~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d----~~~~~~~~~~fD~I~  163 (254)
T d1xtpa_          91 GHGTSRALDCGA--GIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-S----METATLPPNTYDLIV  163 (254)
T ss_dssp             TCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-C----GGGCCCCSSCEEEEE
T ss_pred             CCCCCeEEEecc--cCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-c----ccccccCCCccceEE
Confidence            457789999996  779999998887777999999999999999866544333332221 1    12222  23799997


Q ss_pred             eCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          155 ENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       155 d~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ..---         ..+..+.+.|+++|.++....
T Consensus       164 ~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            65432         236778889999999987644

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.41  E-value=0.0077  Score=42.95  Aligned_cols=88  Identities=24%  Similarity=0.255  Sum_probs=63.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.+.++.|.|. |.+|...+++++.+|++|++.++........  ..+.. .   .   ++.+.+++     .|+|.-++
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~-~---~---~l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIE-L---L---SLDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCE-E---C---CHHHHHHH-----CSEEEECC
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh--hcCce-e---c---cHHHHHhh-----CCEEEEcC
Confidence            35789999998 9999999999999999999999765443332  33332 1   1   44445554     79998887


Q ss_pred             Cc--hh----HhhhHhhhhcCCEEEEEec
Q 024337          158 GG--KT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~--~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.  ++    -...+..|+++..+|.++.
T Consensus       107 Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            73  21    2467888999888888765

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.35  E-value=0.0099  Score=42.62  Aligned_cols=89  Identities=11%  Similarity=0.055  Sum_probs=62.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.++.|+|. |.+|...+++++.+|.+|+..++......... ..+...   ..   ++.+.+.+     .|+|.-+++
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQATF---HD---SLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-cccccc---cC---CHHHHHhh-----CCeEEecCC
Confidence            4799999998 99999999999999999999987544333322 222211   11   45555554     788888776


Q ss_pred             c--hh----HhhhHhhhhcCCEEEEEec
Q 024337          159 G--KT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      .  ++    -...+..|+++..+|.++.
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCccEEEecCC
Confidence            3  21    2467788999988888765

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.29  E-value=0.002  Score=48.65  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=31.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      +.|+|+||++|+|.++++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            46899999999999999999999999999997643

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.23  E-value=0.03  Score=38.58  Aligned_cols=91  Identities=16%  Similarity=0.166  Sum_probs=54.6

Q ss_pred             CEEEEecCcchHHH-HHHHHHHHcCC-EEEEEeC-CHH--HHHHHHHHcCCceeEecCChhhHHHHHHHHCC-CCccEEE
Q 024337           81 ECVFISAASGAVGQ-LVGQFAKLLGC-YVVGSAG-SKD--KVDLLKNKFGFDEAFNYKEEADLNAALKRYFP-EGIDVYF  154 (269)
Q Consensus        81 ~~vlI~ga~g~vG~-~~i~~a~~~G~-~V~~~~~-s~~--~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-~~~d~vi  154 (269)
                      -++.|.| +|.+|. ..+++++.... ++++++. +.+  ...+++ ++|.....      +..+.+.+... .++|+||
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~~------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTTY------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEES------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCcccc------cceeeeeecccccccCEEE
Confidence            4789999 599987 56778876644 7888764 333  345566 78775332      11222322222 2699999


Q ss_pred             eCCCc-hhHhhh--HhhhhcCCEEEEEe
Q 024337          155 ENVGG-KTLDAV--LPNMKIRGRIAACG  179 (269)
Q Consensus       155 d~~g~-~~~~~~--~~~l~~~G~~v~~g  179 (269)
                      .+++. .+.+..  .+.++.|-.++...
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            99985 455433  44455555565543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.19  E-value=0.0068  Score=45.98  Aligned_cols=33  Identities=18%  Similarity=0.207  Sum_probs=30.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      .+|||+||+|-+|...+..++..|.+|++++++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            369999999999999999999999999999865

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.19  E-value=0.005  Score=41.08  Aligned_cols=72  Identities=19%  Similarity=0.094  Sum_probs=47.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchh
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT  161 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  161 (269)
                      +|.|+|++|-+|.+..++++..|.+++.......           ..        .+         .++|+++|++..+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-----------~~--------~~---------~~~DVvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-----------VE--------EL---------DSPDVVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-----------EE--------EC---------SCCSEEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-----------HH--------Hh---------ccCCEEEEecCHHH
Confidence            6899999999999999999998987765542100           00        00         13677777777666


Q ss_pred             HhhhHhhhhcCCEEEEEecc
Q 024337          162 LDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       162 ~~~~~~~l~~~G~~v~~g~~  181 (269)
                      ....++.....+.=+.+|.+
T Consensus        54 ~~~~l~~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          54 LPKTVDLCKKYRAGLVLGTT   73 (128)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             HHHHHHHHHhcCCCEEEEcC
Confidence            55555555555544555553

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.0042  Score=40.33  Aligned_cols=35  Identities=23%  Similarity=0.307  Sum_probs=31.8

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ..+|.|+|+ |.+|.|.++-|+.+|.++++.+++++
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            357999998 99999999999999999999997755

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.12  E-value=0.012  Score=46.08  Aligned_cols=74  Identities=16%  Similarity=0.135  Sum_probs=47.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHH--HcCCce-eEecCChhhHHHHHHHHCCCCccEEE
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAG----SKDKVDLLKN--KFGFDE-AFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~----s~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +|||+||+|-+|...+..+...|.+|+++++    .........+  .-+... ..|..+...+.+.+++   .++|+||
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~Vi   78 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD---HAIDTVI   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEEE
Confidence            6999999999999999999999999999874    2222333221  112221 1343333123333332   2699999


Q ss_pred             eCCC
Q 024337          155 ENVG  158 (269)
Q Consensus       155 d~~g  158 (269)
                      .+++
T Consensus        79 HlAa   82 (338)
T d1udca_          79 HFAG   82 (338)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9885

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.08  E-value=0.0087  Score=44.67  Aligned_cols=89  Identities=17%  Similarity=0.082  Sum_probs=60.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-eeEecCChhhHHHHHHHHC-CCCccE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEADLNAALKRYF-PEGIDV  152 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~i~~~~-~~~~d~  152 (269)
                      .++++||=+|+  |.|..+..+++ .|.+|++++.|++.++.+++..   +.. ..+..    +    +.+.. ++.||+
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~----d----~~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ----D----ISNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC----C----GGGCCCSCCEEE
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc----c----hhhhcccccccc
Confidence            44678999997  45777777776 5889999999999888876432   322 12221    1    12222 348999


Q ss_pred             EEeCCCc-----------hhHhhhHhhhhcCCEEEE
Q 024337          153 YFENVGG-----------KTLDAVLPNMKIRGRIAA  177 (269)
Q Consensus       153 vid~~g~-----------~~~~~~~~~l~~~G~~v~  177 (269)
                      |+...+.           ..++.+.+.|+++|.++.
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9965432           146778889999998885

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.0024  Score=38.42  Aligned_cols=34  Identities=21%  Similarity=0.263  Sum_probs=30.8

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ++|.|.|+ |..|.|.++-++.+|.++++.+.+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            47999998 99999999999999999999997644

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.04  E-value=0.011  Score=42.41  Aligned_cols=89  Identities=21%  Similarity=0.158  Sum_probs=62.0

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|+++.|+|. |.+|...+++++.+|++|+..++...... .. ..+....   .   ++.+.+++     .|+|.-++
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~-~~~~~~~---~---~l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGV-ER-ALGLQRV---S---TLQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTH-HH-HHTCEEC---S---SHHHHHHH-----CSEEEECC
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCcccccc-hh-hhccccc---c---chhhcccc-----CCEEEEee
Confidence            35789999998 99999999999999999999997644322 22 3343211   1   44555554     68887777


Q ss_pred             Cc--hh----HhhhHhhhhcCCEEEEEec
Q 024337          158 GG--KT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       158 g~--~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.  ++    -...+..|+++..+|.++.
T Consensus       113 plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCCCeEEecCC
Confidence            63  21    2356778888888887755

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.03  E-value=0.01  Score=42.02  Aligned_cols=53  Identities=13%  Similarity=0.121  Sum_probs=39.9

Q ss_pred             HHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Q 024337           70 GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF  124 (269)
Q Consensus        70 ~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~  124 (269)
                      +|.+...--++++|+|+|+ ||++.+++..+...| +|+++.|+.++.+.+.+.+
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1           8 ALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             HHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            3433333357899999998 999998888776656 9999999999877664344

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.03  E-value=0.0025  Score=44.56  Aligned_cols=87  Identities=14%  Similarity=0.077  Sum_probs=56.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-----eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-----AFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +|+|+|+ |.+|.+....+...|.+|..+++++++.+... ..+...     .+....    .+.+.     .+|++|-|
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~-----~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTAND----PDFLA-----TSDLLLVT   70 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEESC----HHHHH-----TCSEEEEC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCccccccccccch----hhhhc-----ccceEEEe
Confidence            7999998 99999999999889999999998876444332 223211     122221    22222     58999999


Q ss_pred             CCchhHhhhHh----hhhcCCEEEEEe
Q 024337          157 VGGKTLDAVLP----NMKIRGRIAACG  179 (269)
Q Consensus       157 ~g~~~~~~~~~----~l~~~G~~v~~g  179 (269)
                      +.......+++    .+.++..++.+.
T Consensus        71 vka~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             ecccchHHHHHhhccccCcccEEeecc
Confidence            98754444444    444556666653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.03  E-value=0.0055  Score=47.97  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=30.8

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      +++||+||+|-+|...+..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            579999999999999999999999999999974

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.00  E-value=0.031  Score=38.16  Aligned_cols=78  Identities=12%  Similarity=-0.019  Sum_probs=54.2

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC--CccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE--GIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~--~~d~vid~~g  158 (269)
                      ++|.|.|+.|.+|...+..++..|.+|.+.+++.+...... ..+++.++...........+.+..+.  +=.+++|+++
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            58999997799999999999999999999998876555544 45666655554432334444444322  1247888887


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus        89 v   89 (152)
T d2pv7a2          89 V   89 (152)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.98  E-value=0.014  Score=44.69  Aligned_cols=36  Identities=17%  Similarity=0.140  Sum_probs=32.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      +..+|||+||||-+|..++..+...|.+|++++|+.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            456799999999999999999988999999999853

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.98  E-value=0.024  Score=40.67  Aligned_cols=96  Identities=14%  Similarity=0.044  Sum_probs=62.0

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCcee-EecCChhhHHHHHHHH-CCCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEADLNAALKRY-FPEG  149 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~i~~~-~~~~  149 (269)
                      +...++.+||-+|+  |.|..+..+++ .|++|++++.|++.++.+++   ..+.+.+ +...+       +.+. ..+.
T Consensus        26 ~~~~~~grvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d-------~~~~~~~~~   95 (198)
T d2i6ga1          26 AKVVAPGRTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD-------LNTLTFDGE   95 (198)
T ss_dssp             HTTSCSCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC-------TTTCCCCCC
T ss_pred             cccCCCCcEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhhee-------ccccccccc
Confidence            33333448999997  57888888776 59999999999998877652   3344321 11111       1111 1237


Q ss_pred             ccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+|+...--         ..++.+.+.|+++|.++....
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          96 YDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9999864321         256778888999999887654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.92  E-value=0.013  Score=41.81  Aligned_cols=89  Identities=16%  Similarity=-0.012  Sum_probs=62.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.++.|.|. |.+|...+++++.+|.+|+..++........+ ..+...   ..   ++.+.++     ..|+|.-+..
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~~l~-----~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTW---HA---TREDMYP-----VCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHGG-----GCSEEEECSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc-cccccc---cC---CHHHHHH-----hccchhhccc
Confidence            5789999998 99999999999999999999997644444433 444321   11   3344443     3788877776


Q ss_pred             c--h----hHhhhHhhhhcCCEEEEEec
Q 024337          159 G--K----TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~----~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .  +    .-...+..|+++..+|.++.
T Consensus       110 lt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            3  2    13567788888888887755

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.89  E-value=0.0066  Score=48.14  Aligned_cols=34  Identities=21%  Similarity=0.311  Sum_probs=29.8

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      +.+||+||+|=+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999999999999999999743

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.89  E-value=0.16  Score=35.64  Aligned_cols=91  Identities=11%  Similarity=0.096  Sum_probs=60.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEe-CCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSA-GSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~-~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++.|.|. |.+|...++.++.. ++++++++ +++++.+.+.++++... .-.++   ++.+.+.+   ..+|+|+-|++
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~---~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLED---PEIDALYVPLP   75 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHHC---TTCCEEEECCC
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhhc---cccceeeeccc
Confidence            5889997 89999888888776 66888664 56666555554777532 11122   34444432   26999999998


Q ss_pred             c-hhHhhhHhhhhcCCEEEEEec
Q 024337          159 G-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .+++.+..++..+-. +.+..
T Consensus        76 ~~~h~~~~~~~l~~g~~-v~~EK   97 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKGKH-ILLEK   97 (184)
T ss_dssp             GGGHHHHHHHHHTTTCE-EEECS
T ss_pred             chhhcchhhhhhhccce-eeccc
Confidence            6 778888888887644 44543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.89  E-value=0.013  Score=41.56  Aligned_cols=83  Identities=23%  Similarity=0.206  Sum_probs=60.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|++|.|+|. |.+|...+++++.+|++|++.+++..+        +.....  .   ++.+.++     ..|+++.++.
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~--~---~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT--N---SLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB--S---CSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc--------cceeee--e---chhhhhh-----ccchhhcccc
Confidence            5789999998 999999999999999999999976431        111111  1   3334443     3799988886


Q ss_pred             c--hh----HhhhHhhhhcCCEEEEEec
Q 024337          159 G--KT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      .  ++    -...+..|+++..+|.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccccccccceeeeccccceEEeccc
Confidence            3  22    2567888999999998765

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.85  E-value=0.0094  Score=43.32  Aligned_cols=68  Identities=16%  Similarity=0.108  Sum_probs=44.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      ++|||+||||-+|..+++.+...|.  +|++..|++.         ....-+..... ++.+. .+...+.+|.+++|+|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~---------~~~~~~~~~~~-d~~~~-~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL---------AEHPRLDNPVG-PLAEL-LPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC---------CCCTTEECCBS-CHHHH-GGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch---------hhccccccccc-chhhh-hhccccchheeeeeee
Confidence            7899999999999999999888886  6777765421         11111222222 33333 3333347899999987


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.84  E-value=0.012  Score=38.58  Aligned_cols=41  Identities=17%  Similarity=0.132  Sum_probs=36.0

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      +.....++++++|.|+ |.+|+..++.++.+|.+|.++.+++
T Consensus        15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            3455678899999999 9999999999999999999999764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.79  E-value=0.17  Score=35.36  Aligned_cols=137  Identities=13%  Similarity=0.063  Sum_probs=77.9

Q ss_pred             EEEEecCcchHHHH-HHHHHHHcC--CEEEEEe-CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           82 CVFISAASGAVGQL-VGQFAKLLG--CYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        82 ~vlI~ga~g~vG~~-~i~~a~~~G--~~V~~~~-~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +|.|.|. |.+|.. .....+..+  .++++++ +++++.+.+.+.++...+++     ++.+.+.+   ..+|+|+-|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-----~~~ell~~---~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-----SYEELLES---GLVDAVDLTL   75 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-----CHHHHHHS---SCCSEEEECC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-----eeeccccc---cccceeeccc
Confidence            6889997 888864 566666543  4777654 55666666555777655442     44444432   3699999888


Q ss_pred             Cc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCc-cchHHHhhc-ceee-eeeeecccccchHHHHHHHHHHHHCCCe
Q 024337          158 GG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGV-HNLMYLVSK-RLRM-EGFIVLDHYHLYPKFLEMIIPHIKEGKL  233 (269)
Q Consensus       158 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~  233 (269)
                      .. .+...+..++..+ .=|.+..+..    ..... ..+.....+ +..+ .+... + .......+..+.+++.+|++
T Consensus        76 p~~~h~~~~~~al~~g-k~V~~EKPl~----~~~~e~~~l~~~~~~~~~~~~v~~~~-R-~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          76 PVELNLPFIEKALRKG-VHVICEKPIS----TDVETGKKVVELSEKSEKTVYIAENF-R-ENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEEESSSS----SSHHHHHHHHHHHHHCSSCEEEECGG-G-CCHHHHHHHHHHHHHHSCCC
T ss_pred             cccccccccccccccc-hhhhcCCCCc----CCHHHHHHHHHHHHHhCCeEEEEeec-c-ccccCHHHHHHHHHHHCCCC
Confidence            86 6777787877775 4445544221    11000 112222222 2222 22111 1 12245667888899999876


Q ss_pred             e
Q 024337          234 V  234 (269)
Q Consensus       234 ~  234 (269)
                      .
T Consensus       149 g  149 (181)
T d1zh8a1         149 N  149 (181)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.77  E-value=0.01  Score=38.90  Aligned_cols=39  Identities=18%  Similarity=0.055  Sum_probs=34.4

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      ..++..++|+|.|| |.+|+..+..++.+|.+|+++.+++
T Consensus        17 ~~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             hccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            34566789999999 9999999999999999999999763

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.75  E-value=0.017  Score=41.66  Aligned_cols=68  Identities=21%  Similarity=0.315  Sum_probs=53.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .|.+|+|.|- |.+|..+++++...|++|++.+.+.++..... .+|... ++..   +       ...-++|+++=|+.
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~-~~~~---~-------~~~~~~DI~iPcA~   92 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTA-VALE---D-------VLSTPCDVFAPCAM   92 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-CCGG---G-------GGGCCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhcccc-cCcc---c-------cccccceeeecccc
Confidence            6789999997 99999999999999999999999888888887 777643 2211   1       11126898887766


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      +
T Consensus        93 ~   93 (201)
T d1c1da1          93 G   93 (201)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=95.74  E-value=0.024  Score=41.54  Aligned_cols=93  Identities=8%  Similarity=-0.027  Sum_probs=60.8

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHC-CCCccE
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF-PEGIDV  152 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~-~~~~d~  152 (269)
                      .+..++.+||=.|+  |.|..+..+++ .|.+|++++.+++..+.+++.+.-.. .+..+-        .+.. ++.||+
T Consensus        16 ~~~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~--------~~~~~~~~fD~   84 (225)
T d2p7ia1          16 TPFFRPGNLLELGS--FKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRF--------EDAQLPRRYDN   84 (225)
T ss_dssp             GGGCCSSCEEEESC--TTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCG--------GGCCCSSCEEE
T ss_pred             hhhCCCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhcccccccccccccc--------ccccccccccc
Confidence            44556778999996  56777776664 58899999999999999985544321 222211        1112 348999


Q ss_pred             EEeCCCc-------hhHhhhH-hhhhcCCEEEEE
Q 024337          153 YFENVGG-------KTLDAVL-PNMKIRGRIAAC  178 (269)
Q Consensus       153 vid~~g~-------~~~~~~~-~~l~~~G~~v~~  178 (269)
                      |+..---       ..+.... ++|+++|.++..
T Consensus        85 I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          85 IVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            9853321       2245555 678999988875

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0028  Score=49.36  Aligned_cols=32  Identities=19%  Similarity=0.216  Sum_probs=29.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      ++|||+||+|-+|...+..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            68999999999999999999889999999975

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.67  E-value=0.11  Score=36.25  Aligned_cols=98  Identities=16%  Similarity=0.053  Sum_probs=61.7

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcC-CEEEEEeC--CHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC---------CC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAG--SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF---------PE  148 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~--s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~---------~~  148 (269)
                      -+|.|.|- |-+|....+.+.... .+++.+..  .......+. ..+.+... .... ........-.         ..
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYA-ASEE-FIPRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEE-SSGG-GHHHHHHHTCCCSCBHHHHHT
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeec-cccc-ceeeecccCccccchhhhhhc
Confidence            37899998 999999888886654 47777763  223344555 55554222 1111 1111111000         02


Q ss_pred             CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          149 GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       149 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      ++|+|+||+|. ...+.+-..+..+-+.|..+.+.
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            69999999996 67777778889998988877643

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.63  E-value=0.0066  Score=48.12  Aligned_cols=75  Identities=20%  Similarity=0.239  Sum_probs=48.4

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .++.+|||+||+|=+|..++..+...|.+|+++++........  ......  ..|..+   .... .+.. .++|.|+.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~--~~~~~~~~~~D~~~---~~~~-~~~~-~~~d~Vih   85 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--DMFCDEFHLVDLRV---MENC-LKVT-EGVDHVFN   85 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--GGTCSEEEECCTTS---HHHH-HHHH-TTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh--hcccCcEEEeechh---HHHH-HHHh-hcCCeEee
Confidence            3578999999999999999999999999999998643322111  112212  223332   2222 2222 26999999


Q ss_pred             CCCc
Q 024337          156 NVGG  159 (269)
Q Consensus       156 ~~g~  159 (269)
                      +++.
T Consensus        86 ~a~~   89 (363)
T d2c5aa1          86 LAAD   89 (363)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8853

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.62  E-value=0.017  Score=41.28  Aligned_cols=80  Identities=13%  Similarity=0.144  Sum_probs=56.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc------ee----EecCChhhHHHHHHHHCCCCc
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD------EA----FNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~------~~----~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .+|.|+|+ |.+|.+.+.++...|.+|....++++..+.+. +-+..      ..    +....  ++.+.+.     +.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~--~l~~a~~-----~a   78 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTS--DVEKAYN-----GA   78 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEES--CHHHHHT-----TC
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccch--hhhhccC-----CC
Confidence            46999998 99999999999888889999999999888776 32211      01    11111  4444443     47


Q ss_pred             cEEEeCCCchhHhhhHhhh
Q 024337          151 DVYFENVGGKTLDAVLPNM  169 (269)
Q Consensus       151 d~vid~~g~~~~~~~~~~l  169 (269)
                      |+++-+++...+...++.+
T Consensus        79 d~iiiavPs~~~~~~~~~~   97 (189)
T d1n1ea2          79 EIILFVIPTQFLRGFFEKS   97 (189)
T ss_dssp             SCEEECSCHHHHHHHHHHH
T ss_pred             CEEEEcCcHHHHHHHHHHH
Confidence            9999999986666655544

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=95.62  E-value=0.097  Score=36.44  Aligned_cols=98  Identities=16%  Similarity=0.065  Sum_probs=56.6

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce-eEecCChhhHHHHHHHHCCCCc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~-~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      .++.++.+||=.++  |.|...+..++ .|++|+.++.+++..+.+++   .++... +...+.. .+... ....+++|
T Consensus        37 ~~~~~g~~vLDl~~--G~G~~~i~a~~-~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d-~~~~~-~~~~~~~f  111 (171)
T d1ws6a1          37 LRYPRRGRFLDPFA--GSGAVGLEAAS-EGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE-VFLPE-AKAQGERF  111 (171)
T ss_dssp             HHCTTCCEEEEETC--SSCHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH-HHHHH-HHHTTCCE
T ss_pred             ccccCCCeEEEecc--ccchhhhhhhh-ccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh-ccccc-ccccCCcc
Confidence            35778889988775  33444455444 58999999999998877754   345543 3333322 22222 22333489


Q ss_pred             cEEEeCC----Cc-hhHhhhH--hhhhcCCEEEE
Q 024337          151 DVYFENV----GG-KTLDAVL--PNMKIRGRIAA  177 (269)
Q Consensus       151 d~vid~~----g~-~~~~~~~--~~l~~~G~~v~  177 (269)
                      |+||---    +- ..+...+  .+++++|.++.
T Consensus       112 D~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         112 TVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             EEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             ceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            9987422    21 2333332  35778887664

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.59  E-value=0.028  Score=44.12  Aligned_cols=39  Identities=18%  Similarity=0.201  Sum_probs=34.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK  116 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~  116 (269)
                      ++.++|+|+||||.+|..++..+...|.+|++++|+.++
T Consensus         1 ~~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           1 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            356899999999999999999999999999999987554

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.58  E-value=0.031  Score=41.11  Aligned_cols=70  Identities=17%  Similarity=0.146  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -.|.+|+|.|- |.+|..+++++...|++|++++.+..+.+.+.+..|... ++..   +       ...-++|+++=|+
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~-~~~~---~-------~~~~~cDIl~PcA  104 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-VAPN---A-------IYGVTCDIFAPCA  104 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-CCGG---G-------TTTCCCSEEEECS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc-cCCc---c-------cccccccEecccc
Confidence            36889999998 999999999999999999999999988887775677642 2211   1       1122689888887


Q ss_pred             Cc
Q 024337          158 GG  159 (269)
Q Consensus       158 g~  159 (269)
                      -+
T Consensus       105 ~~  106 (230)
T d1leha1         105 LG  106 (230)
T ss_dssp             CS
T ss_pred             cc
Confidence            65

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.55  E-value=0.026  Score=43.20  Aligned_cols=96  Identities=17%  Similarity=0.096  Sum_probs=64.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC------c---eeEecCChhhHHHHHHHHCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------D---EAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~------~---~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ...++|||.|+  |-|..+-.++++.+. +|.++.-+++-.+.+++-+..      +   .++..    +-.+.+++..+
T Consensus        79 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~----Da~~~l~~~~~  152 (290)
T d1xj5a_          79 PNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG----DGVAFLKNAAE  152 (290)
T ss_dssp             SCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES----CHHHHHHTSCT
T ss_pred             CCCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc----cHHHHHhhccc
Confidence            45579999996  456677788887775 899999999988888743311      1   12211    44555655544


Q ss_pred             CCccEEE-eCCCc----------hhHhhhHhhhhcCCEEEEEe
Q 024337          148 EGIDVYF-ENVGG----------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       148 ~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ++||+|| |+...          +.++.+.+.|+++|.++.-.
T Consensus       153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            5899665 44321          24678899999999988753

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.49  E-value=0.073  Score=36.67  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=58.9

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-  159 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  159 (269)
                      ++|.+.|- |-+|...+..+...|.+|++.+++.++.+.+. +.+....   .   +..+.+.     ..|+++-|+.. 
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~~~~---~---~~~e~~~-----~~diii~~v~~~   68 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGASAA---R---SARDAVQ-----GADVVISMLPAS   68 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCEEC---S---SHHHHHT-----SCSEEEECCSCH
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhcccc---c---hhhhhcc-----ccCeeeecccch
Confidence            36888887 99999988888888999999999999988887 7765322   1   2333332     36888888875 


Q ss_pred             hhHhh-------hHhhhhcCCEEEEEec
Q 024337          160 KTLDA-------VLPNMKIRGRIAACGM  180 (269)
Q Consensus       160 ~~~~~-------~~~~l~~~G~~v~~g~  180 (269)
                      .....       ....+.++-.++.++.
T Consensus        69 ~~~~~v~~~~~~~~~~l~~g~iiid~st   96 (162)
T d3cuma2          69 QHVEGLYLDDDGLLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHHHHHSTTCHHHHSCTTCEEEECSC
T ss_pred             hhHHHHHhccccccccCCCCCEEEECCC
Confidence            22222       2334445555655544

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.49  E-value=0.024  Score=44.12  Aligned_cols=100  Identities=16%  Similarity=0.072  Sum_probs=62.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce--eEecCChhhHHHHHHHHCCCCcc
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ..+|++||=.++  ++|..++.+++ .+.+|++++.++...+.++++   .|.+.  .+..+.. ++.+.+.+ .++.||
T Consensus       143 ~~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~-~~~~~~~~-~~~~fD  217 (318)
T d1wxxa2         143 RFRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF-DLLRRLEK-EGERFD  217 (318)
T ss_dssp             GCCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH-HHHHHHHH-TTCCEE
T ss_pred             HhCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH-HHhhhhHh-hhcCCC
Confidence            346899988876  33555566664 456999999999988887753   34432  2322221 33333322 223899


Q ss_pred             EEEeCCC-----c-----------hhHhhhHhhhhcCCEEEEEecc
Q 024337          152 VYFENVG-----G-----------KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       152 ~vid~~g-----~-----------~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +|+--.+     .           ..+..++++|+|||.++.+...
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            8874221     1           1345788899999999987653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.025  Score=38.46  Aligned_cols=82  Identities=21%  Similarity=0.144  Sum_probs=46.2

Q ss_pred             EEEEecCcchHHHHHHHH-HHHcC---CEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           82 CVFISAASGAVGQLVGQF-AKLLG---CYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~-a~~~G---~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +|.|.||||-+|+..+++ +.+..   .+++...++........ ..+. ....+..+   .. .+.     ++|++|-|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-~~~~~~~~~~~~~---~~-~~~-----~~DivF~a   72 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQDAFD---LE-ALK-----ALDIIVTC   72 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-GGTCCCBCEETTC---HH-HHH-----TCSEEEEC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-ccCCceeeecccc---hh-hhh-----cCcEEEEe
Confidence            689999999999999974 54432   36776664432211111 1111 11222221   11 121     58999999


Q ss_pred             CCchhHhhhHhhhhcCC
Q 024337          157 VGGKTLDAVLPNMKIRG  173 (269)
Q Consensus       157 ~g~~~~~~~~~~l~~~G  173 (269)
                      ++.+........+...|
T Consensus        73 ~~~~~s~~~~~~~~~~g   89 (146)
T d1t4ba1          73 QGGDYTNEIYPKLRESG   89 (146)
T ss_dssp             SCHHHHHHHHHHHHHTT
T ss_pred             cCchHHHHhhHHHHhcC
Confidence            99866555555554444

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=95.39  E-value=0.01  Score=44.47  Aligned_cols=97  Identities=9%  Similarity=0.054  Sum_probs=61.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHH-CCCCccE
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRY-FPEGIDV  152 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~-~~~~~d~  152 (269)
                      ++++++||=.|+  |.|..+..+++....+|++++.|++.++.+++..   +...-+..... +...  ... .++.||+
T Consensus        22 ~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~--~~~~~~~~fD~   96 (252)
T d1ri5a_          22 TKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-DSYG--RHMDLGKEFDV   96 (252)
T ss_dssp             CCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-CTTT--SCCCCSSCEEE
T ss_pred             CCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc-chhh--hcccccccceE
Confidence            578999999997  4466677777765559999999999988887432   32211111000 1000  001 1237999


Q ss_pred             EEeCCCc-----------hhHhhhHhhhhcCCEEEEE
Q 024337          153 YFENVGG-----------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       153 vid~~g~-----------~~~~~~~~~l~~~G~~v~~  178 (269)
                      |+....-           ..+..+.+.|+++|+++..
T Consensus        97 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          97 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9865432           1346677889999998764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.19  Score=33.98  Aligned_cols=96  Identities=7%  Similarity=-0.046  Sum_probs=61.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHH--cCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNK--FGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~--~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      +.+.++|.|. |.+|..+++.+...|.+|++++.++++. +.+.+.  .|.. ++..+.  ...+.+++..-+.+|.++-
T Consensus         2 ~knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~--~d~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS--NDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCT--TSHHHHHHHTTTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccC--cchHHHHHhccccCCEEEE
Confidence            3467999998 9999999999999999999999776543 233312  2332 343333  2334455554347899999


Q ss_pred             CCCch--hH--hhhHhhhhcCCEEEEE
Q 024337          156 NVGGK--TL--DAVLPNMKIRGRIAAC  178 (269)
Q Consensus       156 ~~g~~--~~--~~~~~~l~~~G~~v~~  178 (269)
                      +++.+  .+  ....+.+.+.-+++..
T Consensus        78 ~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          78 LSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            98862  22  2334445566666654

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.36  E-value=0.038  Score=40.24  Aligned_cols=104  Identities=13%  Similarity=0.127  Sum_probs=65.2

Q ss_pred             HHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHH--
Q 024337           70 GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAAL--  142 (269)
Q Consensus        70 ~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i--  142 (269)
                      .|....+..+.++||-+|  ++.|..++.+|+.+  +.+|+.++.+++..+.+++   ..|....+..... +..+.+  
T Consensus        47 lL~~lv~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~G-d~~e~l~~  123 (214)
T d2cl5a1          47 IMDAVIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNG-ASQDLIPQ  123 (214)
T ss_dssp             HHHHHHHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGG
T ss_pred             HHHHHHHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeec-cccccccc
Confidence            344445566778999999  47788888899875  5699999999887776653   4566432322222 333333  


Q ss_pred             -HHHCC-CCccEEE-eCCCch-----hHhhhHhhhhcCCEEE
Q 024337          143 -KRYFP-EGIDVYF-ENVGGK-----TLDAVLPNMKIRGRIA  176 (269)
Q Consensus       143 -~~~~~-~~~d~vi-d~~g~~-----~~~~~~~~l~~~G~~v  176 (269)
                       ..... +.||++| |..-..     .+..+++.|++||.++
T Consensus       124 l~~~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         124 LKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             HHHHSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhcccccccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence             33222 3799775 433221     2456677899988654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0045  Score=45.58  Aligned_cols=98  Identities=17%  Similarity=0.132  Sum_probs=66.0

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHC--CCCcc
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYF--PEGID  151 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~--~~~~d  151 (269)
                      ...++.+||-+|+  |.|..+..+++..+.+|++++.|++.++.+++.+...  ..+..... +    +.+..  .+.||
T Consensus        57 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d----~~~~~~~~~~fD  129 (222)
T d2ex4a1          57 NKTGTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-G----LQDFTPEPDSYD  129 (222)
T ss_dssp             -CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-C----GGGCCCCSSCEE
T ss_pred             CCCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-c----cccccccccccc
Confidence            3567889999996  7788888888777779999999999999888544321  01111111 1    11221  23799


Q ss_pred             EEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337          152 VYFENVGG---------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       152 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +|+....-         ..+..+.+.|+++|.++....
T Consensus       130 ~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         130 VIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            99874331         246778889999999988754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.34  E-value=0.031  Score=43.79  Aligned_cols=76  Identities=18%  Similarity=0.133  Sum_probs=46.9

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH--HcCCce-eEecCChhhHHHHHHHHCCCCccEE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----KDKVDLLKN--KFGFDE-AFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s----~~~~~~~~~--~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      +.|||+||+|=+|...+..+...|.+|+++++.    .+.......  .-+... ..|..+..++...+..   .++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---YKIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---SCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            479999999999999999999999999998642    122222220  112221 2344443122222322   269999


Q ss_pred             EeCCCc
Q 024337          154 FENVGG  159 (269)
Q Consensus       154 id~~g~  159 (269)
                      |.+++.
T Consensus        79 ihlAa~   84 (347)
T d1z45a2          79 IHFAGL   84 (347)
T ss_dssp             EECCSC
T ss_pred             EEcccc
Confidence            998873

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.34  E-value=0.017  Score=37.70  Aligned_cols=35  Identities=17%  Similarity=0.204  Sum_probs=31.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      ..++++|.|| |.+|+.+++.+..+|.+|+++.+.+
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            3588999999 9999999999999999999999764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.31  E-value=0.039  Score=41.75  Aligned_cols=36  Identities=17%  Similarity=0.173  Sum_probs=32.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      .++|||+||+|-+|..++..+...|.+|++++|+..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~   38 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCc
Confidence            467999999999999999999999999999997643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.25  E-value=0.03  Score=36.78  Aligned_cols=38  Identities=13%  Similarity=-0.017  Sum_probs=33.2

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .-.++++|+|.|| |.+|+.+++.+..+|.+|+++.+++
T Consensus        26 ~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          26 VDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3356789999998 9999999999999999999998663

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=95.15  E-value=0.042  Score=41.77  Aligned_cols=96  Identities=16%  Similarity=0.158  Sum_probs=66.7

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHH-CCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRY-FPE  148 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~-~~~  148 (269)
                      .++.++.+||=.|+  |.|..+..+++..  +.+|++++.+++..+.+++.+   +....+-..   +.    .+. .++
T Consensus        23 ~~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~---d~----~~~~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG---DA----TEIELND   93 (281)
T ss_dssp             SCCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEES---CT----TTCCCSS
T ss_pred             hccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccc---cc----ccccccC
Confidence            35678889999996  5688888888875  569999999999888877433   222112111   11    111 134


Q ss_pred             CccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEe
Q 024337          149 GIDVYFENVGG-------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       149 ~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +||+|+....-       ..++.+.+.|+|+|.++...
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            79999875432       35788999999999998765

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.11  E-value=0.028  Score=36.86  Aligned_cols=40  Identities=15%  Similarity=0.170  Sum_probs=35.4

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ..++++++++|.|| |.+|..++..++.+|.+|+.+.+++.
T Consensus        25 ~~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          25 AGLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             HHCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             HhhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            34678899999999 99999999999999999999997743

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.011  Score=46.36  Aligned_cols=73  Identities=16%  Similarity=0.089  Sum_probs=46.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeE--ecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAF--NYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~--~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|||+||+|-+|..+++.+...| .+|+++++...+...+.+.-.+ ..+  |..+..++.+.+.+    ++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~-~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF-HFVEGDISIHSEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTE-EEEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCe-EEEECccCChHHHHHHHHh----CCCccccccc
Confidence            69999999999999998887778 5999998765554443311112 122  22221133332322    4899999887


Q ss_pred             c
Q 024337          159 G  159 (269)
Q Consensus       159 ~  159 (269)
                      -
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.04  E-value=0.081  Score=37.00  Aligned_cols=93  Identities=14%  Similarity=0.064  Sum_probs=57.7

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+|.+.|- |.+|...+.-+...|.+|++.++++++.+.+. +.++..  .....   .. +.+.+... ..|.++-++.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~~~~~~~~a~---~~-~~~~~~~~-~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEAKGTKVLGAH---SL-EEMVSKLK-KPRRIILLVK   75 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTTTTSSCEECS---SH-HHHHHHBC-SSCEEEECSC
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhccccccccchh---hh-hhhhhhhc-ccceEEEecC
Confidence            46889998 99999999999889999999999999998887 544421  11111   11 12222211 3566666665


Q ss_pred             c-h----hHhhhHhhhhcCCEEEEEec
Q 024337          159 G-K----TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~----~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .    ..+.....++++-.++.++.
T Consensus        76 ~~~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          76 AGQAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             TTHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             chHHHHHHHHHHHhccccCcEEEecCc
Confidence            3 2    23344445555556665544

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.028  Score=43.47  Aligned_cols=97  Identities=20%  Similarity=0.163  Sum_probs=55.6

Q ss_pred             HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH--HHcCCc---eeEecCChhhHHHHHHH
Q 024337           71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLK--NKFGFD---EAFNYKEEADLNAALKR  144 (269)
Q Consensus        71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~--~~~g~~---~~~~~~~~~~~~~~i~~  144 (269)
                      +.+...+.++++||-.|+  |.|..++.+|+ .|+ +|++++.++......+  .+.+..   .++..+.. ++     .
T Consensus        27 i~~~~~~~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~-~l-----~   97 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIE-EV-----H   97 (311)
T ss_dssp             HHHCGGGTTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTT-TS-----C
T ss_pred             HHhccccCCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHH-Hh-----c
Confidence            434445678999999997  46777776666 476 8999998876432211  133432   23332221 11     0


Q ss_pred             HCCCCccEEEeC-CCc----h----h-HhhhHhhhhcCCEEE
Q 024337          145 YFPEGIDVYFEN-VGG----K----T-LDAVLPNMKIRGRIA  176 (269)
Q Consensus       145 ~~~~~~d~vid~-~g~----~----~-~~~~~~~l~~~G~~v  176 (269)
                      ...+++|+|+.- .+.    +    . +....+.|+|+|+++
T Consensus        98 ~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          98 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            112389999752 221    1    2 223345799999887

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.98  E-value=0.043  Score=42.27  Aligned_cols=98  Identities=16%  Similarity=0.101  Sum_probs=64.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-ee-----EecCChhhHHHHHHHHCCCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD-EA-----FNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~-~~-----~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ...++|||.|+  |-|..+-.++++... +|.++.-+++-.+.+++-+... ..     ++..-. +..+.+++ ++.+|
T Consensus       105 ~~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~y  180 (312)
T d2b2ca1         105 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  180 (312)
T ss_dssp             SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEc-hHHHHHHh-CCCCC
Confidence            45678999996  556777788887765 8999999999888888434321 11     111111 44555654 44589


Q ss_pred             cEEEe-CC---Cc-------hhHhhhHhhhhcCCEEEEEe
Q 024337          151 DVYFE-NV---GG-------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       151 d~vid-~~---g~-------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      |+||- ..   +.       +.++.+.+.|+++|.++.-.
T Consensus       181 DvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         181 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            98863 22   11       34678889999999988754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.98  E-value=0.077  Score=36.63  Aligned_cols=96  Identities=15%  Similarity=0.081  Sum_probs=65.1

Q ss_pred             hcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337           59 ILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL  138 (269)
Q Consensus        59 ~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~  138 (269)
                      -+||+....+..|....---.|++|+|.|.+.-+|.-...++...|++|+.......                     +.
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l   74 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NL   74 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CH
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hh
Confidence            445554555555533222347999999999999999999999999999877653211                     23


Q ss_pred             HHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          139 NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       139 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .+.+++     .|+++-++|...+- --+.++++..++.+|..
T Consensus        75 ~~~~~~-----ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          75 RHHVEN-----ADLLIVAVGKPGFI-PGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             HHHHHH-----CSEEEECSCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred             HHHHhh-----hhHhhhhccCcccc-cccccCCCcEEEecCce
Confidence            333333     79999999973321 13467888888888764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.98  E-value=0.025  Score=36.99  Aligned_cols=46  Identities=15%  Similarity=0.113  Sum_probs=36.3

Q ss_pred             hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .+.+.++ +..  +..++++|.|| |.+|+..++.++.+|.+|.++.+++
T Consensus        10 ~~s~~~l-~l~--~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          10 VDSTGAL-DFQ--NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EEHHHHT-SCS--SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EchhHhh-Ccc--cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3455555 222  34588999999 9999999999999999999999663

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.96  E-value=0.01  Score=42.29  Aligned_cols=35  Identities=14%  Similarity=0.097  Sum_probs=31.1

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD  115 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~  115 (269)
                      +++|+|.|| |..|+.++..++.+|+ .|+++.+++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999 9999999999999999 5888887654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.90  E-value=0.13  Score=35.00  Aligned_cols=88  Identities=18%  Similarity=0.084  Sum_probs=53.3

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~---~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      =+|.|.||||-+|...++++..+..   ++...+ |.+...... ......  ..+..+. +         ....|+++-
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~-s~~s~G~~~-~~~~~~~~~~~~~~~-~---------~~~~d~~f~   69 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA-SARSAGKSL-KFKDQDITIEETTET-A---------FEGVDIALF   69 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE-CGGGTTCEE-EETTEEEEEEECCTT-T---------TTTCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec-ccccccccc-cccCCcccccccchh-h---------hhhhhhhhh
Confidence            3799999999999999999988853   555555 332111100 111111  1111111 1         125899999


Q ss_pred             CCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          156 NVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      +.+. ...+.+.+....+-+++..+.
T Consensus        70 ~~~~~~s~~~~~~~~~~~~~VIDlSs   95 (154)
T d2gz1a1          70 SAGSSTSAKYAPYAVKAGVVVVDNTS   95 (154)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             ccCccchhhHHhhhccccceehhcCh
Confidence            9997 555566666777778887654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.90  E-value=0.025  Score=37.20  Aligned_cols=35  Identities=20%  Similarity=0.149  Sum_probs=31.6

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      ..++++|.|| |.+|+..++.+..+|.+|+++.+++
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            3579999999 9999999999999999999999763

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.88  E-value=0.13  Score=35.56  Aligned_cols=133  Identities=11%  Similarity=0.081  Sum_probs=78.7

Q ss_pred             EEEEecCcchHHHH-HHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           82 CVFISAASGAVGQL-VGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~-~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      +|.|.|+ |.+|.. ....++.. +.+++++++++++.+.+.+.++....++.     +.+.+.    ..+|.|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~ll~----~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTD-----YRDVLQ----YGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSS-----TTGGGG----GCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccccc-----HHHhcc----cccceecccccc
Confidence            6889998 888854 55566555 55877777888887777667887554422     111121    258999999986


Q ss_pred             -hhHhhhHhhhhcCCEEEEEeccccccCCCCC-CccchHHHh-hcceee-eeeeecccccchHHHHHHHHHHHHCCCeee
Q 024337          160 -KTLDAVLPNMKIRGRIAACGMISQYNLDKPE-GVHNLMYLV-SKRLRM-EGFIVLDHYHLYPKFLEMIIPHIKEGKLVY  235 (269)
Q Consensus       160 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  235 (269)
                       .+.+.+..+++.+-. |.+..+..    ... ....+.... .++..+ .++      ..+...+..+.+.+..|++..
T Consensus        73 ~~H~~~~~~al~~gk~-V~~EKP~~----~~~~e~~~l~~~a~~~~~~~~vg~------~r~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          73 DVHSTLAAFFLHLGIP-TFVDKPLA----ASAQECENLYELAEKHHQPLYVGF------NGFDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             GGHHHHHHHHHHTTCC-EEEESCSC----SSHHHHHHHHHHHHHTTCCEEEEC------GTHHHHHHHHHHHHHHTCCCH
T ss_pred             cccccccccccccccc-cccCCCCc----CCHHHHHHHHHHHHHcCCEEEEEe------CcCCHHHHHHHHHhhcCCCCc
Confidence             778888888887654 44544221    010 001112222 233322 221      123455777788888888764

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.82  E-value=0.24  Score=35.06  Aligned_cols=105  Identities=15%  Similarity=0.195  Sum_probs=66.5

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc---CCc-eeEecCChhhHHHHHHHHCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKF---GFD-EAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ....+++++.++=.+  -|.|-.+-.+++.. +.+|++++++++..+.+++.+   +.. ..++.+-. ++...+.....
T Consensus        17 ~~l~~~~~~~~lD~t--~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~   93 (192)
T d1m6ya2          17 EFLKPEDEKIILDCT--VGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGI   93 (192)
T ss_dssp             HHHCCCTTCEEEETT--CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTC
T ss_pred             HhhCCCCCCEEEEec--CCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCC
Confidence            345678888775443  34455555566554 679999999999998887544   221 23333322 45455555444


Q ss_pred             CCccEE-EeCCCc----------------hhHhhhHhhhhcCCEEEEEecc
Q 024337          148 EGIDVY-FENVGG----------------KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       148 ~~~d~v-id~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +++|.| +| .|-                ..+..+.+.|+++|+++.+..+
T Consensus        94 ~~vdgIl~D-lGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          94 EKVDGILMD-LGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             SCEEEEEEE-CSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             CCcceeeec-cchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            589866 55 331                2467788889999999887664

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.79  E-value=0.025  Score=36.80  Aligned_cols=34  Identities=24%  Similarity=0.128  Sum_probs=31.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .++++|.|+ |.+|+.+++.++.+|.+|+++.+++
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            578999999 9999999999999999999999764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.76  E-value=0.021  Score=37.57  Aligned_cols=37  Identities=16%  Similarity=0.162  Sum_probs=32.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      +..++++|.|| |-+|+..++.++.+|.+|.++.+++.
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            34689999999 99999999999999999999997643

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.049  Score=41.24  Aligned_cols=102  Identities=10%  Similarity=-0.006  Sum_probs=62.3

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHc-------CCEEEEEeCCHHHHHHHHHHcCCc-----eeEecCCh--hhHHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLL-------GCYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEE--ADLNAAL  142 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~-------G~~V~~~~~s~~~~~~~~~~~g~~-----~~~~~~~~--~~~~~~i  142 (269)
                      .++.-+||=.|+  |.|..+..+++..       +.++++++.|+..++.+++.+.-.     ..++....  +++....
T Consensus        38 ~~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (280)
T d1jqea_          38 TKSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRM  115 (280)
T ss_dssp             TCSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHH
T ss_pred             CCCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchh
Confidence            344457999986  4566655555432       337889999999888887443321     12333332  0222222


Q ss_pred             HHHC-CCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          143 KRYF-PEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       143 ~~~~-~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      .... +++||+|+....-       ..+..+.++|+++|.++....
T Consensus       116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            2222 3389999874431       467889999999998877644

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.72  E-value=0.12  Score=32.16  Aligned_cols=50  Identities=14%  Similarity=0.110  Sum_probs=39.5

Q ss_pred             CCCCCEEEEecCcchHHHHH-HHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCce
Q 024337           77 AKHGECVFISAASGAVGQLV-GQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDE  128 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~-i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~  128 (269)
                      .+..+++.+.|- ||+|+.+ +++++..|.+|.+.+.... ..+.++ +.|...
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~v   56 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAKI   56 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCEE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCeE
Confidence            456788999998 8889777 8999999999999997533 455666 778753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.70  E-value=0.021  Score=40.32  Aligned_cols=38  Identities=18%  Similarity=0.110  Sum_probs=33.7

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ...+++|+|.|| |+.|+.++..+...|.+|++..+.++
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            355789999999 99999999999999999999997643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.70  E-value=0.19  Score=35.15  Aligned_cols=88  Identities=18%  Similarity=0.067  Sum_probs=55.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCc---------eeEecCChhhHHHHHHHHCCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFD---------EAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~---------~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      +|.|.|+ |.+|.+.+..+...|.+|+...|..+  ..+... +-...         ..+... . +..+.+.     ..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~~-~-~~~~~~~-----~a   72 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFWP-E-QLEKCLE-----NA   72 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEECG-G-GHHHHHT-----TC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhcccccccc-c-cHHHHHh-----cc
Confidence            6889998 99999999999888999999887433  334333 11110         011111 1 4444443     48


Q ss_pred             cEEEeCCCchhHhhhHhhhhc---CCEEEEE
Q 024337          151 DVYFENVGGKTLDAVLPNMKI---RGRIAAC  178 (269)
Q Consensus       151 d~vid~~g~~~~~~~~~~l~~---~G~~v~~  178 (269)
                      |+++-++....+...++.+.+   ...++.+
T Consensus        73 d~Ii~avps~~~~~~~~~l~~~l~~~~ii~~  103 (180)
T d1txga2          73 EVVLLGVSTDGVLPVMSRILPYLKDQYIVLI  103 (180)
T ss_dssp             SEEEECSCGGGHHHHHHHHTTTCCSCEEEEC
T ss_pred             chhhcccchhhhHHHHHhhccccccceeccc
Confidence            999999998666666655554   3444443

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.64  E-value=0.023  Score=43.87  Aligned_cols=74  Identities=11%  Similarity=0.191  Sum_probs=47.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCce-----eEecCChhhHHHHHHHHCCCCccEE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFDE-----AFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~~-----~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ++|||+||+|-+|..++..+...|.+|+++++...  ..+.++ .++...     ..|..+...+...+...   ..+++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~~~   76 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---QPQEV   76 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH-HhcccCCcEEEEccccChHHhhhhhccc---ccccc
Confidence            48999999999999999999888999999997543  234444 444431     22333331223333322   45677


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      +.++.
T Consensus        77 ~~~a~   81 (321)
T d1rpna_          77 YNLAA   81 (321)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            77665

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.59  E-value=0.021  Score=42.61  Aligned_cols=34  Identities=12%  Similarity=0.027  Sum_probs=30.9

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ..++|+|.|| |..|++++..++..|.+|+++.++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3578999999 999999999999999999999864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.56  E-value=0.024  Score=37.30  Aligned_cols=34  Identities=18%  Similarity=0.040  Sum_probs=30.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ..++++|.|| |.+|+..++.++.+|.+|.++.++
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            3467999999 999999999999999999999864

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.55  E-value=0.028  Score=37.15  Aligned_cols=36  Identities=17%  Similarity=0.151  Sum_probs=32.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      +..++++|.|+ |-+|+..++.++.+|.+|+.+.+++
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            44689999999 9999999999999999999999763

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.037  Score=42.17  Aligned_cols=99  Identities=15%  Similarity=0.138  Sum_probs=63.1

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC----C--ceeEecCChhhHHHHHHHHCCCCc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG----F--DEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g----~--~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ...++|||.|+  |-|..+-.++++.+. +|.++.-+++-.+.+++-+.    .  +.-++.... |..+.+++ ++++|
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~-Da~~~l~~-~~~~y  152 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQDAF  152 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSSCE
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEc-cHHHHHhc-CCCCC
Confidence            45689999996  556777777887655 99999999998888874331    1  101111111 44445544 34489


Q ss_pred             cEEE-eCCCc----------hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYF-ENVGG----------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+|+ |....          +.++.+.+.|+++|.++.-..
T Consensus       153 DvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  193 (285)
T d2o07a1         153 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE  193 (285)
T ss_dssp             EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEecc
Confidence            9775 43321          347788899999999886543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.54  E-value=0.17  Score=33.98  Aligned_cols=72  Identities=21%  Similarity=0.122  Sum_probs=46.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCceeE----ecCChhhHHHHHHHHCCCCccEEE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDEAF----NYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~~~----~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      .+|.|.||+|.+|..++.++...|.  ++..++..+.+. .+.+-.......    ..... +..+.++     +.|+++
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~-~a~Dl~~~~~~~~~~~~~~~~-~~~~~~~-----~aDivV   73 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAADLSHIETRATVKGYLGPE-QLPDCLK-----GCDVVV   73 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHHHTTSSSSCEEEEEESGG-GHHHHHT-----TCSEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch-hhHHHhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEEE
Confidence            3689999889999999999998887  788888665443 333122221111    11122 4445454     489999


Q ss_pred             eCCCc
Q 024337          155 ENVGG  159 (269)
Q Consensus       155 d~~g~  159 (269)
                      -+.|.
T Consensus        74 itag~   78 (144)
T d1mlda1          74 IPAGV   78 (144)
T ss_dssp             ECCSC
T ss_pred             ECCCc
Confidence            99883

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.45  E-value=0.13  Score=35.66  Aligned_cols=96  Identities=11%  Similarity=0.088  Sum_probs=66.5

Q ss_pred             hhcCCcchhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChh
Q 024337           58 GILGMPGMTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEA  136 (269)
Q Consensus        58 a~l~~~~~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~  136 (269)
                      +-+||+....+..| +..++ -.|++|+|.|.+.-+|.-.+.++...|++|+.+.....                     
T Consensus        17 ~~~PcTp~aii~lL-~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~---------------------   74 (170)
T d1a4ia1          17 CFIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA---------------------   74 (170)
T ss_dssp             CCCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------
T ss_pred             CCCCChHHHHHHHH-HHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccc---------------------
Confidence            34555555555555 33443 47899999999999999999999999999998773322                     


Q ss_pred             hHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          137 DLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       137 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +..+..+     ..|+++-++|...+-. -+.++++-.++.+|..
T Consensus        75 ~l~~~~~-----~aDivi~a~G~~~~i~-~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          75 HLDEEVN-----KGDILVVATGQPEMVK-GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             SHHHHHT-----TCSEEEECCCCTTCBC-GGGSCTTCEEEECCCB
T ss_pred             cHHHHHh-----hccchhhccccccccc-cccccCCCeEeccCcc
Confidence            2222222     3789999998744322 4578888888888764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.42  E-value=0.037  Score=36.45  Aligned_cols=34  Identities=15%  Similarity=0.044  Sum_probs=31.3

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .++++|.|| |.+|+..+..++.+|.+|+++.+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478999999 9999999999999999999999764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.40  E-value=0.039  Score=36.77  Aligned_cols=39  Identities=13%  Similarity=-0.009  Sum_probs=34.8

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      ..+.++++++|.|| |.+|+.++..++..|.+|.++.+++
T Consensus        30 ~~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          30 RQLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             HhhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            34677899999999 9999999999999999999999764

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.39  E-value=0.082  Score=40.00  Aligned_cols=95  Identities=15%  Similarity=0.063  Sum_probs=61.4

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---------------eeEecCChhhHHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---------------EAFNYKEEADLNAA  141 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---------------~~~~~~~~~~~~~~  141 (269)
                      ..+.++|||.|+  |.|..+-.++++-..+|.++.-+++-.+.+++-++..               .++..    +....
T Consensus        70 ~~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~----Da~~~  143 (276)
T d1mjfa_          70 HPKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG----DGFEF  143 (276)
T ss_dssp             SSCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES----CHHHH
T ss_pred             CCCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC----hHHHH
Confidence            355689999996  4455556666654458999999998888887444321               12221    34444


Q ss_pred             HHHHCCCCccEEE-eCCCc----------hhHhhhHhhhhcCCEEEEEe
Q 024337          142 LKRYFPEGIDVYF-ENVGG----------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       142 i~~~~~~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +++  .+++|+|| |+...          +.++.+.+.|+++|.++.-.
T Consensus       144 l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         144 IKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             Hhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            543  34899775 34321          23678889999999887643

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=94.38  E-value=0.71  Score=34.74  Aligned_cols=104  Identities=13%  Similarity=0.169  Sum_probs=65.4

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCceeE-ecCCh---------------
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDEAF-NYKEE---------------  135 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~~~-~~~~~---------------  135 (269)
                      ..+.++..|+... +|..|++++..|+.+|.+++++.+   ++.+.+.++ .+|+.-++ .....               
T Consensus        55 g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          55 GEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             TSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             CCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccccc
Confidence            4455666655544 599999999999999996666654   566777777 88886332 11110               


Q ss_pred             -----------h-------hHHHHHHHHCCCCccEEEeCCCc-hh---HhhhHhhhhcCCEEEEEec
Q 024337          136 -----------A-------DLNAALKRYFPEGIDVYFENVGG-KT---LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       136 -----------~-------~~~~~i~~~~~~~~d~vid~~g~-~~---~~~~~~~l~~~G~~v~~g~  180 (269)
                                 .       ....++.+-.++.+|.++.++|+ ..   +...++...+..+++-+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                       0       01122323344579999999885 33   3455555667778776654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.34  E-value=0.036  Score=35.88  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=30.9

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .++++|.|| |.+|+.+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            478999999 9999999999999999999998663

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.29  E-value=0.35  Score=33.71  Aligned_cols=92  Identities=12%  Similarity=0.080  Sum_probs=55.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCH--HHHHHHHHHcCCceeEecCChh-----------hHHHHHHHHCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSK--DKVDLLKNKFGFDEAFNYKEEA-----------DLNAALKRYFP  147 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~--~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~i~~~~~  147 (269)
                      +|.|.|- |-+|....+.+.... .+++++....  .....+. ..+...........           .+.+...    
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~----   76 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK----   76 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH----
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCccceeccccceecCCchhhhhh----
Confidence            6889996 999999999998764 5888876432  2333333 33332211111100           1111111    


Q ss_pred             CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       148 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       ++|+|+||+|. ...+.+-..++.+-+++..+.
T Consensus        77 -~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          77 -TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             -HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             -cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence             48999999996 566667777777767776544

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.23  E-value=0.29  Score=29.76  Aligned_cols=47  Identities=19%  Similarity=0.200  Sum_probs=36.3

Q ss_pred             CEEEEecCcchHHHHH-HHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCcee
Q 024337           81 ECVFISAASGAVGQLV-GQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDEA  129 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~-i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~~  129 (269)
                      .+|-+.|- ||+|+.. +++++..|++|.+.+..+. ..+.++ ++|+...
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i~   50 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPIF   50 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCEE
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeEE
Confidence            46777787 8889755 6888999999999998763 456677 8998643

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.23  E-value=0.061  Score=40.68  Aligned_cols=95  Identities=14%  Similarity=0.091  Sum_probs=63.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc----CC--c---eeEecCChhhHHHHHHHHCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKF----GF--D---EAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~----g~--~---~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ...++|||.|+  |-|..+..++++.+. +|.++.-+++-.+.+++-+    ++  +   .++..    +..+.+++ ++
T Consensus        74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~----D~~~~l~~-~~  146 (274)
T d1iy9a_          74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SE  146 (274)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHHHHT-CC
T ss_pred             CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec----hHHHHHhh-cC
Confidence            45689999995  557777788887765 9999999999888887433    22  1   12322    33344443 34


Q ss_pred             CCccEEE-eCCCc----------hhHhhhHhhhhcCCEEEEEe
Q 024337          148 EGIDVYF-ENVGG----------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       148 ~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .++|+|+ |....          +.++.+.+.|+++|.++.-.
T Consensus       147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            4899875 43221          34788999999999888643

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.21  E-value=0.065  Score=41.36  Aligned_cols=94  Identities=19%  Similarity=0.155  Sum_probs=62.6

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC-----C--c---eeEecCChhhHHHHHHHHC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG-----F--D---EAFNYKEEADLNAALKRYF  146 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g-----~--~---~~~~~~~~~~~~~~i~~~~  146 (269)
                      ...++|||.|+  |.|..+..++++... +|.++..+++-.+.+++.+.     .  +   .++.   . +..+.+++ +
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~---~-Da~~~l~~-~  148 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---D-DARAYLER-T  148 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---S-CHHHHHHH-C
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE---c-hHHHHhhh-c
Confidence            45689999996  557777778877654 99999999998888874441     1  1   1221   1 44555554 4


Q ss_pred             CCCccEEE-eCC---Cc----------hhHhhhHhhhhcCCEEEEE
Q 024337          147 PEGIDVYF-ENV---GG----------KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       147 ~~~~d~vi-d~~---g~----------~~~~~~~~~l~~~G~~v~~  178 (269)
                      +++||+|| |..   +.          +.++.+.+.|+++|.++.-
T Consensus       149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            45899775 432   21          2357788999999988754

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.18  E-value=0.026  Score=43.85  Aligned_cols=92  Identities=22%  Similarity=0.138  Sum_probs=54.0

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~  147 (269)
                      ..+.+|++||-+|+  |.|..++.+++ .|+ +|++++.++. ...+++   ..+...   ++..+.. ++     ....
T Consensus        29 ~~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~-~~-----~~~~   98 (316)
T d1oria_          29 RHLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVE-EV-----ELPV   98 (316)
T ss_dssp             HHHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTT-TC-----CCSS
T ss_pred             cccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHH-Hc-----cccc
Confidence            34568999999997  45777776666 576 8999997754 222221   334432   2322221 11     0112


Q ss_pred             CCccEEEeCC-Cc-----h----hHhhhHhhhhcCCEEE
Q 024337          148 EGIDVYFENV-GG-----K----TLDAVLPNMKIRGRIA  176 (269)
Q Consensus       148 ~~~d~vid~~-g~-----~----~~~~~~~~l~~~G~~v  176 (269)
                      +.+|+|+... +.     .    .+....++|+|+|+++
T Consensus        99 ~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          99 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            3799987532 21     1    2344567899999886

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.17  E-value=0.36  Score=33.37  Aligned_cols=96  Identities=15%  Similarity=0.119  Sum_probs=57.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcC-CEEEEEeCC--HHHHHHHHHHcCCceeEecCCh-hhHHH-------HHHHHCCCCc
Q 024337           82 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGS--KDKVDLLKNKFGFDEAFNYKEE-ADLNA-------ALKRYFPEGI  150 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s--~~~~~~~~~~~g~~~~~~~~~~-~~~~~-------~i~~~~~~~~  150 (269)
                      +|.|.|- |-+|..+.+.+...+ .+++++...  ......+. ..+.+......+. ..+.+       ...+.. .++
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence            6899997 999999999887665 477776642  23334444 5554422211110 00100       001110 259


Q ss_pred             cEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+|+||+|. ...+.+-..+..+-+.|..+.
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~  110 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGG  110 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEECC
Confidence            999999996 666667777888878777654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.19  Score=35.53  Aligned_cols=85  Identities=22%  Similarity=0.175  Sum_probs=60.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|+|. |.+|...+++++.+|++|+..++....        .........   ++.+.+++     .|++.-+++
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKL--------PLGNATQVQ---HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCC--------CCTTCEECS---CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeeccccccc--------hhhhhhhhh---hHHHHHhh-----ccceeeccc
Confidence            5789999998 999999999999999999999965321        111112222   44555554     688888876


Q ss_pred             c--hh----HhhhHhhhhcCCEEEEEec
Q 024337          159 G--KT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      -  ++    -...++.|+++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence            3  21    2567888888888888755

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.05  E-value=0.43  Score=31.02  Aligned_cols=36  Identities=22%  Similarity=0.257  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      +.++.+|++.|-||.-|....+.++.+|-+|++-..
T Consensus        12 i~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVt   47 (130)
T d1euca1          12 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTT   47 (130)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             EcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeec
Confidence            678899999999999999999999999999887663

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=94.03  E-value=0.41  Score=34.15  Aligned_cols=107  Identities=12%  Similarity=0.047  Sum_probs=66.2

Q ss_pred             hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHH
Q 024337           65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNA  140 (269)
Q Consensus        65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~  140 (269)
                      -.-|..++.  +  ++..||=+|.  |.|..++.+|+.. +.++++++.+......+.+   +.+...+--...  +...
T Consensus        19 ~~~w~~~F~--~--~~PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~--Da~~   90 (204)
T d2fcaa1          19 KGKWNTVFG--N--DNPIHIEVGT--GKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI--DADT   90 (204)
T ss_dssp             TTCHHHHHT--S--CCCEEEEECC--TTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC--CGGG
T ss_pred             HhHHHHHcC--C--CCceEEEEEe--cCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc--chhh
Confidence            334555543  2  3456777785  7789999999886 6699999999887766532   456543211111  2111


Q ss_pred             HHHHHCCCCccEEEeCCCc---------------hhHhhhHhhhhcCCEEEEEe
Q 024337          141 ALKRYFPEGIDVYFENVGG---------------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       141 ~i~~~~~~~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .......+.+|.++-....               ..+....+.|+|||.+....
T Consensus        91 l~~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1          91 LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             hhcccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            2222223478876544322               24677889999999987763

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.01  E-value=0.066  Score=41.43  Aligned_cols=99  Identities=16%  Similarity=0.059  Sum_probs=61.9

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCc----eeEecCChhhHHHHHHHH-
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKF---GFD----EAFNYKEEADLNAALKRY-  145 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~---g~~----~~~~~~~~~~~~~~i~~~-  145 (269)
                      ..+.+|++||=..+  ++|..++..++ .|+ +|+.++.++...+.+++++   |.+    ..+..    +..+.++.. 
T Consensus       140 ~~~~~g~~VLdlf~--~~G~~sl~aa~-~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~----d~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFS--YTAAFSVAAAM-GGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM----DVFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETC--TTTHHHHHHHH-TTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES----CHHHHHHHHH
T ss_pred             HHhhCCCceeecCC--CCcHHHHHHHh-CCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc----cHHHHHHHHH
Confidence            45778999987764  33444444443 577 8999999998888877544   321    12322    333334332 


Q ss_pred             -CCCCccEEEeCCCc----------------hhHhhhHhhhhcCCEEEEEec
Q 024337          146 -FPEGIDVYFENVGG----------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       146 -~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                       .+.+||+||---+.                ..+..++++|+++|.++.+..
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence             22389988742210                245678889999999988765

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.00  E-value=0.028  Score=42.74  Aligned_cols=33  Identities=21%  Similarity=0.149  Sum_probs=30.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      +++|+|.|| |..|+.++..++..|.+|.++..+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            478999999 999999999999999999999864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.92  E-value=0.16  Score=34.36  Aligned_cols=66  Identities=15%  Similarity=0.044  Sum_probs=43.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  160 (269)
                      +|.|.|. |.+|...+.-+...|.+|++..++..+....+ ..+.. +.+.     ..+.++     ..|+||-|+...
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~-~~~~-----~~e~~~-----~~diIi~~v~~~   67 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-ARTVG-VTET-----SEEDVY-----SCPVVISAVTPG   67 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-HHHHT-CEEC-----CHHHHH-----TSSEEEECSCGG
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-hhccc-cccc-----HHHHHh-----hcCeEEEEecCc
Confidence            5888887 99999999999999999998886665544333 22322 1221     112222     378888888763

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.99  Score=35.06  Aligned_cols=104  Identities=19%  Similarity=0.202  Sum_probs=65.4

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCceeEec-C-------Ch--------
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDEAFNY-K-------EE--------  135 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~~~~~-~-------~~--------  135 (269)
                      ..+++...|+. ..+|..|.+++..|+.+|.+.+++.+   ++++.+.++ .+|+.-+... .       ..        
T Consensus        92 g~~~~~~~vv~-aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          92 GTLKPGDTIIE-PTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             TCSCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             CCcccCceEEE-ecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            34566666555 44599999999999999997776664   456788888 9998633210 0       00        


Q ss_pred             ----------------------hhHHHHHHHHCCCCccEEEeCCCc-hhH---hhhHhhhhcCCEEEEEec
Q 024337          136 ----------------------ADLNAALKRYFPEGIDVYFENVGG-KTL---DAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       136 ----------------------~~~~~~i~~~~~~~~d~vid~~g~-~~~---~~~~~~l~~~G~~v~~g~  180 (269)
                                            .....++.+-.++.+|.++-++|+ ..+   -..++...+.-+++.+..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                                  001122222223468999999996 333   344555556778877654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.79  E-value=0.036  Score=43.24  Aligned_cols=92  Identities=23%  Similarity=0.167  Sum_probs=53.2

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHCC
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~~  147 (269)
                      ..+.++++||-+|+  |.|..+..+++ .|+ +|++++.++ ..+.+++   +.+...   ++..+.. ++     ...+
T Consensus        34 ~~~~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred             cccCCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence            44568999999997  45777665555 576 899999775 3333321   344432   2322221 11     1112


Q ss_pred             CCccEEEeCC-C----c-h----hHhhhHhhhhcCCEEE
Q 024337          148 EGIDVYFENV-G----G-K----TLDAVLPNMKIRGRIA  176 (269)
Q Consensus       148 ~~~d~vid~~-g----~-~----~~~~~~~~l~~~G~~v  176 (269)
                      +++|+|+... +    . .    .+...-++|+|+|+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            3799887632 1    1 1    2344457899999886

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=93.78  E-value=0.016  Score=41.19  Aligned_cols=95  Identities=9%  Similarity=-0.004  Sum_probs=54.9

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      .=+|.|.||||-+|+..++++..+-. ++..+..+...-+... +..... ..+.......    .+..-.+.|++|.|.
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFG-SVFPHLITQDLPNLVAV----KDADFSNVDAVFCCL   79 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHH-HHCGGGTTSCCCCCBCG----GGCCGGGCSEEEECC
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccc-cccccccccccccchhh----hhhhhcccceeeecc
Confidence            34789999999999999999988744 7666663322222222 111100 0000000000    000012589999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEe
Q 024337          158 GGKTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +..........+...+..+...
T Consensus        80 p~~~s~~~~~~l~~~~~~v~~~  101 (183)
T d2cvoa1          80 PHGTTQEIIKGLPQELKIVDLS  101 (183)
T ss_dssp             SSSHHHHHHHTSCSSCEEEECS
T ss_pred             ccchHHHHHHHHHhcCcccccc
Confidence            9866666667777888777653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.77  E-value=0.027  Score=39.31  Aligned_cols=97  Identities=13%  Similarity=0.065  Sum_probs=62.2

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HcC--Cce---eEecCChhhHHHHHHHHCCCCcc
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN-KFG--FDE---AFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~-~~g--~~~---~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      -.|++++|.|-+.-+|.=.+.++...|++|+..... ....+.++ ..-  ...   +..+..+ .+.+..++     .|
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lk~~~~~-----aD   99 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN-NIQKFTRGESLKLNKHHVEDLGEYSED-LLKKCSLD-----SD   99 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS-EEEEEESCCCSSCCCCEEEEEEECCHH-HHHHHHHH-----CS
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc-cccccccccceeeeeeccccccccchh-HHhhcccc-----CC
Confidence            468999999998999998888888899999866532 11111000 000  011   1112221 23333433     79


Q ss_pred             EEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337          152 VYFENVGGKTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +++-++|...+..--+.+++|..++.+|..
T Consensus       100 IvIsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1         100 VVITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             EEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             EEEEccCCCccccChhhcccCceEeecccc
Confidence            999999986665556778888888888764

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=93.77  E-value=0.47  Score=30.45  Aligned_cols=90  Identities=14%  Similarity=0.154  Sum_probs=57.6

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +.++.+|+|.|-||..|....+.++.+|-+|++-....+.-+...   |. =+||     ...+.+++ +  ++|.-+=+
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~---gi-PVf~-----tV~eAv~~-~--~~d~SvIf   71 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL---GV-PVYD-----TVKEAVAH-H--EVDASIIF   71 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---TE-EEES-----SHHHHHHH-S--CCSEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE---CC-chHh-----hHHHHHHh-c--CCeEEEEe
Confidence            467889999999999999999999999999888774322111111   11 1342     33334443 2  46766666


Q ss_pred             CCc-hhHhhhHhhhhcCCEEEEE
Q 024337          157 VGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       157 ~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      ++. .....+++.+..+=+++.+
T Consensus        72 VPp~~a~dAi~EAi~agI~liv~   94 (121)
T d1oi7a1          72 VPAPAAADAALEAAHAGIPLIVL   94 (121)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             eCHHHHHHHHHHHHhCCCcEEEE
Confidence            775 5556666777666555444

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=93.69  E-value=0.043  Score=41.54  Aligned_cols=62  Identities=10%  Similarity=0.177  Sum_probs=39.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|||+||+|-+|...+..+...|. ++++++...       .    ...|..+...+.+.+++.   ++|+||.|++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-------~----~~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-------c----ccCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence            699999999999999988877774 555553321       1    112333321333334332   6899999987

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.64  E-value=0.036  Score=37.77  Aligned_cols=33  Identities=15%  Similarity=0.151  Sum_probs=30.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      .|++|||.|| |.+|..-+..+...|++|+++++
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            5899999999 99999999999999999999864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.61  E-value=0.046  Score=40.19  Aligned_cols=37  Identities=22%  Similarity=0.237  Sum_probs=33.1

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      ..+++|+|.|| |..|+.++..++.+|.+|+++..+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            46789999999 99999999999999999999986643

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=93.60  E-value=0.16  Score=37.63  Aligned_cols=100  Identities=14%  Similarity=0.116  Sum_probs=62.9

Q ss_pred             HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCC
Q 024337           73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ....+.+..+||-+|+  |.|..+..+++.. +.++++++. ++..+.+++   +.+....+..... ++.    +..++
T Consensus        74 ~~~d~~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~-D~~----~~~~~  145 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-DFF----EPLPR  145 (253)
T ss_dssp             HHSCCTTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSS
T ss_pred             hhcCCccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc-cch----hhccc
Confidence            3445677889999995  7788999999887 568988885 444444432   3343222221111 211    11223


Q ss_pred             CccEEEeCCC-----c----hhHhhhHhhhhcCCEEEEEec
Q 024337          149 GIDVYFENVG-----G----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ++|+|+-..-     .    ..++.+.+.|+|+|+++....
T Consensus       146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            7998875432     1    236788999999999998754

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.50  E-value=0.23  Score=35.95  Aligned_cols=91  Identities=12%  Similarity=0.172  Sum_probs=57.9

Q ss_pred             CEEEEecCcchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337           81 ECVFISAASGAVGQL-VGQFAKLL-GCYVVGSA-GSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPE-GIDVYF  154 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~-~i~~a~~~-G~~V~~~~-~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~-~~d~vi  154 (269)
                      =+|.|.|. |.+|.. .....+.. ++++++++ +++++.+.+.++++..  .+..++   ++    .++... .+|+|+
T Consensus        34 iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~---d~----~ell~~~~iD~V~  105 (221)
T d1h6da1          34 FGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS---NF----DKIAKDPKIDAVY  105 (221)
T ss_dssp             EEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS---SG----GGGGGCTTCCEEE
T ss_pred             EEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC---ch----hhhcccccceeee
Confidence            37899997 888863 44444443 67888655 5677766665577764  233333   22    222223 799999


Q ss_pred             eCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337          155 ENVGG-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       155 d~~g~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      -|+.. .+.+.+.++++.+- =+.+..
T Consensus       106 I~tp~~~H~~~~~~al~~gk-~v~~EK  131 (221)
T d1h6da1         106 IILPNSLHAEFAIRAFKAGK-HVMCEK  131 (221)
T ss_dssp             ECSCGGGHHHHHHHHHHTTC-EEEECS
T ss_pred             eccchhhhhhHHHHhhhcch-hhhcCC
Confidence            89886 77888888887754 444443

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.34  Score=37.39  Aligned_cols=32  Identities=19%  Similarity=0.127  Sum_probs=29.4

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEe
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA  111 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~  111 (269)
                      .++|||+||+|=+|...+..+...|.+|++++
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            36899999999999999999999999999986

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.37  E-value=0.06  Score=35.20  Aligned_cols=37  Identities=14%  Similarity=0.023  Sum_probs=32.7

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      ++.+++++|.|| |.+|+.++..+..+|.+|+++.+++
T Consensus        29 ~~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          29 IENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hhcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            445689999999 9999999999999999999998763

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.33  E-value=0.05  Score=36.82  Aligned_cols=89  Identities=10%  Similarity=0.039  Sum_probs=49.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLG---CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G---~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      -+|.|.||||-+|+..++++..++   .++..+..+....+...  +..... ....       +....-.+.|++|-|.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~--~~~~~~-~~~~-------~~~~~~~~~d~vf~a~   72 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG--FAESSL-RVGD-------VDSFDFSSVGLAFFAA   72 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE--ETTEEE-ECEE-------GGGCCGGGCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee--eccccc-hhcc-------chhhhhccceEEEecC
Confidence            468999999999999999997543   47776663322211111  111110 0000       0000011689999999


Q ss_pred             CchhHhhhHh-hhhcCCEEEEEe
Q 024337          158 GGKTLDAVLP-NMKIRGRIAACG  179 (269)
Q Consensus       158 g~~~~~~~~~-~l~~~G~~v~~g  179 (269)
                      +......... ....+.+++..+
T Consensus        73 p~~~s~~~~~~~~~~g~~VID~S   95 (144)
T d2hjsa1          73 AAEVSRAHAERARAAGCSVIDLS   95 (144)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEETT
T ss_pred             CcchhhhhccccccCCceEEeec
Confidence            9755444444 444555666543

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.57  Score=29.94  Aligned_cols=90  Identities=17%  Similarity=0.206  Sum_probs=56.3

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN  156 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~  156 (269)
                      +.++.+|+|.|-||.-|....+.++.+|-+|++-....+.-+.   ..|. =+||     +..+.+++.   ++|.-+=.
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~---~~gi-PVf~-----sV~eAv~~~---~~~~SvIf   70 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT---HLGL-PVFN-----TVREAVAAT---GATASVIY   70 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEE---ETTE-EEES-----SHHHHHHHH---CCCEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcc---cCCC-chhh-----HHHHHHHHh---CCCeEEEe
Confidence            4678899999999999999999999999998877633221111   1111 1343     333344432   35666666


Q ss_pred             CCc-hhHhhhHhhhhcCCEEEEE
Q 024337          157 VGG-KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       157 ~g~-~~~~~~~~~l~~~G~~v~~  178 (269)
                      ++. .....+++.+..+=+++.+
T Consensus        71 VPp~~a~dA~~EAi~agI~~iV~   93 (119)
T d2nu7a1          71 VPAPFCKDSILEAIDAGIKLIIT   93 (119)
T ss_dssp             CCGGGHHHHHHHHHHTTCSEEEE
T ss_pred             ccHHHHHHHHHHHHHCCCCEEEE
Confidence            665 4555666677666444433

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.23  E-value=0.078  Score=39.07  Aligned_cols=35  Identities=17%  Similarity=0.108  Sum_probs=31.3

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      +..++|+|.|| |..|++++..+...|.+|.++++.
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            44568999999 999999999999999999999864

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.02  Score=42.75  Aligned_cols=46  Identities=9%  Similarity=-0.171  Sum_probs=33.7

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK  123 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~  123 (269)
                      ...++++||=+|+  |.|..+..+++..+.+|++++-|+...+.+++.
T Consensus        48 ~~~~g~~vLDlGc--G~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~   93 (257)
T d2a14a1          48 GGLQGDTLIDIGS--GPTIYQVLAACDSFQDITLSDFTDRNREELEKW   93 (257)
T ss_dssp             TSCCEEEEEESSC--TTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECC--CCCHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence            3467889999997  345555555555444899999999999888744

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.06  E-value=0.044  Score=37.34  Aligned_cols=80  Identities=15%  Similarity=0.061  Sum_probs=49.2

Q ss_pred             EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhHh
Q 024337           84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLD  163 (269)
Q Consensus        84 lI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~  163 (269)
                      -+.|. |.+|...++.++..+..+.+..|+.++.+.+.+..+.. ..+..+      .+     ...|+||=|+....+.
T Consensus         3 gfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~~~------~~-----~~~DiVil~v~d~~i~   69 (153)
T d2i76a2           3 NFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATLEK------HP-----ELNGVVFVIVPDRYIK   69 (153)
T ss_dssp             EEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSSCC------CC-----C---CEEECSCTTTHH
T ss_pred             EEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccchhh------hh-----ccCcEEEEeccchhhh
Confidence            45676 99999888877653333457889999998888454432 222111      01     1479999999887777


Q ss_pred             hhHhhhhcCCEEE
Q 024337          164 AVLPNMKIRGRIA  176 (269)
Q Consensus       164 ~~~~~l~~~G~~v  176 (269)
                      .....++..++++
T Consensus        70 ~v~~~l~~~~~iv   82 (153)
T d2i76a2          70 TVANHLNLGDAVL   82 (153)
T ss_dssp             HHHTTTCCSSCCE
T ss_pred             HHHhhhcccceee
Confidence            7777777555443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.03  E-value=0.4  Score=32.22  Aligned_cols=37  Identities=24%  Similarity=0.140  Sum_probs=31.4

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDK  116 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~  116 (269)
                      .+.+|.|.|+ |.+|...+..+...+.  ++..++..+++
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            4678999998 9999999998888776  89999987765

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.01  E-value=0.31  Score=31.80  Aligned_cols=91  Identities=13%  Similarity=0.000  Sum_probs=61.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch-
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-  160 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-  160 (269)
                      .++|.|. |.+|..+++.++  +..|++++.++++.+.++ ..|.. ++..+.  .-.+.+++..-..++.++-+...+ 
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~-~i~Gd~--~~~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGAN-FVHGDP--TRVSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCE-EEESCT--TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCcc-cccccc--CCHHHHHHhhhhcCcEEEEeccchh
Confidence            5788898 999998888775  446778888888888887 77775 343433  234555554434789998888752 


Q ss_pred             ---hHhhhHhhhhcCCEEEEEe
Q 024337          161 ---TLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       161 ---~~~~~~~~l~~~G~~v~~g  179 (269)
                         ......+.+.+..+++...
T Consensus        75 ~n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          75 ETIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHHCSSSCEEEEC
T ss_pred             hhHHHHHHHHHHCCCceEEEEE
Confidence               2334555666776666553

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.90  E-value=0.075  Score=38.08  Aligned_cols=85  Identities=22%  Similarity=0.212  Sum_probs=59.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      .+.+|.|+|. |.+|..++++++.+|++|++.++...+.        ....+...   ++.+.+++     .|++.-++.
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~--------~~~~~~~~---~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKG--------DHPDFDYV---SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSS--------CCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccchh--------hhcchhHH---HHHHHHHh-----cccceeeec
Confidence            4689999998 9999999999999999999999753321        11111222   34444443     688887776


Q ss_pred             c--hh----HhhhHhhhhcCCEEEEEec
Q 024337          159 G--KT----LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~--~~----~~~~~~~l~~~G~~v~~g~  180 (269)
                      .  ++    -...+..|+++..+|.++.
T Consensus       107 lt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHhhccCCceEEEeccc
Confidence            3  21    2467788888888887765

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.89  E-value=0.42  Score=36.08  Aligned_cols=101  Identities=14%  Similarity=0.194  Sum_probs=60.5

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCcee-EecCChhhHHHHHHHHCCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~i~~~~~~  148 (269)
                      ....+++++||-..| ++=|-.+ +++... +..|++.+.++.|.+.+++   .+|...+ ....+. ...   .....+
T Consensus        97 ~L~~~~g~~vLD~CA-aPGgKt~-~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~---~~~~~~  170 (284)
T d1sqga2          97 WLAPQNGEHILDLCA-APGGKTT-HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPS---QWCGEQ  170 (284)
T ss_dssp             HHCCCTTCEEEEESC-TTCHHHH-HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTH---HHHTTC
T ss_pred             ccCccccceeEeccC-ccccchh-hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccc---hhcccc
Confidence            456789999998766 3323332 333333 4589999999998766543   5677532 222221 111   112234


Q ss_pred             CccEEE-e--CCCchh--------------------------HhhhHhhhhcCCEEEEEec
Q 024337          149 GIDVYF-E--NVGGKT--------------------------LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vi-d--~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  180 (269)
                      .||.|+ |  |+|...                          +..+++.++++|++|...-
T Consensus       171 ~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTC  231 (284)
T d1sqga2         171 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC  231 (284)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred             cccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence            799664 4  666422                          4667888899998886543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.88  E-value=0.077  Score=41.25  Aligned_cols=34  Identities=21%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      ..++|||+||+|-+|...+..+...|.+|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4578999999999999999999999999999975

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=92.83  E-value=0.087  Score=37.70  Aligned_cols=90  Identities=13%  Similarity=0.075  Sum_probs=59.8

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE  155 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid  155 (269)
                      .+.++.+||=.|+  |.|..+..+     .++++++.|++..+.++ +.+.. .+..+.. ++.     ..++.||+|+.
T Consensus        33 ~~~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~-~~~~d~~-~l~-----~~~~~fD~I~~   97 (208)
T d1vlma_          33 CLLPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIAR-KRGVF-VLKGTAE-NLP-----LKDESFDFALM   97 (208)
T ss_dssp             HHCCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHH-HTTCE-EEECBTT-BCC-----SCTTCEEEEEE
T ss_pred             hhCCCCeEEEECC--CCccccccc-----ceEEEEeCChhhccccc-ccccc-ccccccc-ccc-----ccccccccccc
Confidence            4567788999997  345555444     35789999999999998 55543 2322221 110     11237999987


Q ss_pred             CCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337          156 NVGG-------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       156 ~~g~-------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ...-       ..++.+.+.|+++|+++....
T Consensus        98 ~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          98 VTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             ESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccchhhhhhcCCCCceEEEEec
Confidence            5432       357888999999999987654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.78  E-value=0.065  Score=41.17  Aligned_cols=36  Identities=22%  Similarity=0.137  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ....++|+|+|| |..|+.++..++..|.+|.++..+
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            455679999999 999999999999999999999865

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.73  E-value=0.086  Score=40.24  Aligned_cols=95  Identities=14%  Similarity=0.116  Sum_probs=61.7

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC------c---eeEecCChhhHHHHHHHHCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------D---EAFNYKEEADLNAALKRYFP  147 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~------~---~~~~~~~~~~~~~~i~~~~~  147 (269)
                      ...++|||.|+  |-|..+-.++++.+. +|.++..+++-.+.+++-+..      +   .++.   . |..+.+++ .+
T Consensus        88 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~---~-Da~~~l~~-~~  160 (295)
T d1inla_          88 PNPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---A-NGAEYVRK-FK  160 (295)
T ss_dssp             SSCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---S-CHHHHGGG-CS
T ss_pred             CCCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh---h-hHHHHHhc-CC
Confidence            34589999996  446667777777755 899999999988888743321      1   1221   1 44445544 34


Q ss_pred             CCccEEE-eCCC----c-------hhHhhhHhhhhcCCEEEEEe
Q 024337          148 EGIDVYF-ENVG----G-------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       148 ~~~d~vi-d~~g----~-------~~~~~~~~~l~~~G~~v~~g  179 (269)
                      ++||+|| |+..    .       +.++.+.+.|+++|.++.-.
T Consensus       161 ~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         161 NEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             SCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            4899776 3321    1       34678899999999888653

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.45  E-value=0.052  Score=41.11  Aligned_cols=32  Identities=31%  Similarity=0.257  Sum_probs=29.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .|+|.|| |..|++++..++..|.+|.++.+.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5899999 9999999999999999999998764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.41  E-value=0.18  Score=37.20  Aligned_cols=33  Identities=18%  Similarity=0.171  Sum_probs=28.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG  112 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~  112 (269)
                      .+.+|+|.|+ ||+|..+++.+...|. +++.++.
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            3579999998 9999999999999999 7777774

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=92.37  E-value=0.18  Score=37.51  Aligned_cols=98  Identities=12%  Similarity=0.076  Sum_probs=62.2

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGI  150 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~  150 (269)
                      ..+....+||-+|+  |.|..+..+++++ +.++++++. ++..+.+++   +.+....+..... ++.    +..+.++
T Consensus        77 ~d~~~~~~vlDvG~--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~----~~~p~~~  148 (256)
T d1qzza2          77 YDWSAVRHVLDVGG--GNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFF----KPLPVTA  148 (256)
T ss_dssp             SCCTTCCEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSCCE
T ss_pred             CCCccCCEEEEECC--CCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-ecc----ccccccc
Confidence            34567789999995  7789999999988 679999985 555544432   3343222211111 111    1122368


Q ss_pred             cEEEeCCC-----c----hhHhhhHhhhhcCCEEEEEec
Q 024337          151 DVYFENVG-----G----KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       151 d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      |+++-..-     .    ..++++.+.|+|+|+++.+..
T Consensus       149 D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         149 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            98874322     1    246788899999999998865

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=92.31  E-value=0.036  Score=37.63  Aligned_cols=89  Identities=21%  Similarity=0.180  Sum_probs=48.4

Q ss_pred             EEEEecCcchHHHHHHHHHHH-c---CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKL-L---GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~-~---G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +|.|.||||-+|+..++++.. .   ..++.....+....+. . .++.......... +. +.+     .++|++|-|+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~-~~~~~~~~~~~~~-~~-~~~-----~~~DvvF~al   72 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P-NFGKDAGMLHDAF-DI-ESL-----KQLDAVITCQ   72 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C-CSSSCCCBCEETT-CH-HHH-----TTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c-ccCCcceeeeccc-ch-hhh-----ccccEEEEec
Confidence            689999999999999986543 2   3577666644221111 1 2222111111110 11 112     2589999999


Q ss_pred             CchhHhhhHhhhhcCC-E--EEEEe
Q 024337          158 GGKTLDAVLPNMKIRG-R--IAACG  179 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G-~--~v~~g  179 (269)
                      +..........+...| +  +|..+
T Consensus        73 p~~~s~~~~~~l~~~g~~~~VIDlS   97 (147)
T d1mb4a1          73 GGSYTEKVYPALRQAGWKGYWIDAA   97 (147)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred             CchHHHHHhHHHHHcCCceEEEeCC
Confidence            9865555555555444 3  55543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.29  E-value=0.16  Score=34.46  Aligned_cols=47  Identities=17%  Similarity=0.036  Sum_probs=38.9

Q ss_pred             hhHHHHHHHhhcCCCCCEEEEe--cCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           65 MTAYVGFYEVCSAKHGECVFIS--AASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        65 ~~a~~~l~~~~~~~~~~~vlI~--ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .|....+  ..+..+++.++|+  |+ |-+|+.+++.+..+|.+|+.+.+.+
T Consensus        26 ~t~~d~l--~~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVM--DGKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             ECHHHHH--HTCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ECHHHHh--cCccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4666666  3567788888887  65 8999999999999999999999764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.085  Score=40.97  Aligned_cols=33  Identities=24%  Similarity=0.325  Sum_probs=29.7

Q ss_pred             EE-EEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           82 CV-FISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        82 ~v-lI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      +| ||+||+|=+|..++..+...|.+|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            56 9999999999999999988999999999753

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.02  E-value=0.23  Score=36.63  Aligned_cols=35  Identities=23%  Similarity=0.395  Sum_probs=31.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      -.+.+|+|.|. |.+|..+++++...|++|++++.+
T Consensus        29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            47899999998 999999999999999999988854

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.96  E-value=0.11  Score=35.86  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=29.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSK  114 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~  114 (269)
                      .|++|+|.|| |..|+.+++.++.++.  +|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3789999999 9999999999988874  888887654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.81  E-value=0.11  Score=40.11  Aligned_cols=35  Identities=20%  Similarity=0.209  Sum_probs=31.0

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      +.++|+|.|| |..|+.++..+...|.+|.++..++
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3578999998 9999999999999999999999653

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.81  E-value=0.33  Score=38.22  Aligned_cols=97  Identities=21%  Similarity=0.166  Sum_probs=63.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC---Cce--------------eEecCChhhHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG---FDE--------------AFNYKEEADLNA  140 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g---~~~--------------~~~~~~~~~~~~  140 (269)
                      ++.+||-..  ++.|...+.+++..|+ +|++.+.+++..+.+++++.   ...              .+..... +...
T Consensus        45 ~~~~vLD~~--sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~~  121 (375)
T d2dula1          45 NPKIVLDAL--SATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DANR  121 (375)
T ss_dssp             CCSEEEESS--CTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHHH
T ss_pred             CCCEEEEcC--CCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhhh
Confidence            445555433  6778888999998888 99999999999888875442   111              0111111 2323


Q ss_pred             HHHHHCCCCccEE-EeCCCc--hhHhhhHhhhhcCCEEEEEe
Q 024337          141 ALKRYFPEGIDVY-FENVGG--KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       141 ~i~~~~~~~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g  179 (269)
                      .+.+ .+..||+| +|..|.  ..+..+++.++.+|-+....
T Consensus       122 ~~~~-~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         122 LMAE-RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             HHHH-STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhHh-hcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence            3322 23379954 899996  77899999999888666543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.79  E-value=0.014  Score=40.62  Aligned_cols=92  Identities=17%  Similarity=0.131  Sum_probs=55.9

Q ss_pred             CEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHc----CCc---eeEecCChhhHHHHHHHHCCCCccE
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKF----GFD---EAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      =+|+|.|++|-+|.++++++... ++++++...++.....-+ .+    +..   ..+..+..        . ....+|+
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~~~~--------~-~~~~~DV   74 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQSSLD--------A-VKDDFDV   74 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEESCST--------T-TTTSCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeeccHH--------H-Hhcccce
Confidence            36899999999999999988765 667766553322111100 11    110   01111100        0 1126899


Q ss_pred             EEeCCCchhHhhhHhhhhcCCEEEEEeccc
Q 024337          153 YFENVGGKTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       153 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      ++|++-.+.....++.....|.=+.+|.++
T Consensus        75 iIDFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          75 FIDFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             EEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEeccHHHHHHHHHHHHhccceeEEecCC
Confidence            999998877777777777777767777643

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.77  E-value=0.41  Score=33.28  Aligned_cols=89  Identities=15%  Similarity=0.040  Sum_probs=49.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV  157 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~  157 (269)
                      +|.|.||||-+|...++++..+- .++..+..+...-+.+.+   .+-....+...   +..+...     ..|++|-|.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~---~~~~~~~-----~~dvvf~a~   74 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEF---DPEKVSK-----NCDVLFTAL   74 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCC---CHHHHHH-----HCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccccc---CHhHhcc-----ccceEEEcc
Confidence            68999999999999999998764 477766643332222220   11111122112   2222222     389999999


Q ss_pred             CchhHhhhHhhhhcCCEEEEEe
Q 024337          158 GGKTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       158 g~~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +........... .+-++|..+
T Consensus        75 p~~~s~~~~~~~-~~~~VIDlS   95 (176)
T d1vkna1          75 PAGASYDLVREL-KGVKIIDLG   95 (176)
T ss_dssp             STTHHHHHHTTC-CSCEEEESS
T ss_pred             ccHHHHHHHHhh-ccceEEecC
Confidence            975444333332 345665543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.77  E-value=0.069  Score=37.27  Aligned_cols=32  Identities=19%  Similarity=0.020  Sum_probs=27.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA  111 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~  111 (269)
                      .+++|+|.|| |.+|+.++..++.+|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            5789999999 9999999999999998654443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.63  E-value=0.69  Score=31.24  Aligned_cols=39  Identities=21%  Similarity=0.168  Sum_probs=31.7

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 024337           77 AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK  116 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~  116 (269)
                      .++..+|.|.|+ |.+|...+.++...+. +++.++.++++
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            356789999998 9999988888888776 88888866654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.63  E-value=0.55  Score=33.25  Aligned_cols=71  Identities=18%  Similarity=0.127  Sum_probs=47.0

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEE
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      ..+ .|++||-.|+  |.|.+++.++ ..|+ +|++++.+++..+.+++++..-..+..+-        .+ .+++||+|
T Consensus        45 ~dl-~Gk~VLDlGc--GtG~l~i~a~-~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~--------~~-l~~~fD~V  111 (197)
T d1ne2a_          45 GNI-GGRSVIDAGT--GNGILACGSY-LLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV--------SE-ISGKYDTW  111 (197)
T ss_dssp             TSS-BTSEEEEETC--TTCHHHHHHH-HTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG--------GG-CCCCEEEE
T ss_pred             CCC-CCCEEEEeCC--CCcHHHHHHH-HcCCCcccccccCHHHHHHHHHccccccEEEEeh--------hh-cCCcceEE
Confidence            444 5899999997  3465555444 4565 89999999999999885554434443321        11 23589999


Q ss_pred             EeCCC
Q 024337          154 FENVG  158 (269)
Q Consensus       154 id~~g  158 (269)
                      +..-+
T Consensus       112 i~NPP  116 (197)
T d1ne2a_         112 IMNPP  116 (197)
T ss_dssp             EECCC
T ss_pred             EeCcc
Confidence            86544

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=91.59  E-value=0.31  Score=33.67  Aligned_cols=93  Identities=18%  Similarity=0.196  Sum_probs=60.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCc-----e---------eE--------ecCChh
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFD-----E---------AF--------NYKEEA  136 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~-----~---------~~--------~~~~~~  136 (269)
                      +|.|.|- |-+|.++.+.+...+.+++++..   +.+....+. ++.-.     .         .+        +..++ 
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p-   78 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP-   78 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh-
Confidence            5889998 99999999988878888887764   234555554 33210     0         11        11111 


Q ss_pred             hHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          137 DLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       137 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                         +.+.+  .+ ++|+|+||+|. ...+.+...+..+-+-|.+..+.
T Consensus        79 ---~~i~W--~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          79 ---ENIPW--SKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             ---GGCCH--HHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             ---HHCCc--cccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence               01100  12 79999999996 77778888888887667766543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.31  E-value=0.14  Score=39.38  Aligned_cols=35  Identities=20%  Similarity=0.160  Sum_probs=31.1

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ++..+|+|+|| |-.|+.++..++..|.+|.+...+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45678999999 999999999999999999998854

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=91.27  E-value=0.095  Score=41.20  Aligned_cols=30  Identities=20%  Similarity=0.171  Sum_probs=25.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCE-EEEEe
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCY-VVGSA  111 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~  111 (269)
                      +|||+||+|-+|..++..+...|.+ |++++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            6999999999999999999888985 55554

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.23  E-value=0.12  Score=38.51  Aligned_cols=32  Identities=22%  Similarity=0.122  Sum_probs=28.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK  114 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~  114 (269)
                      .|+|.|| |..|++++.+++..|. +|.++.+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            5899999 9999999999999997 888877653

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=91.17  E-value=0.43  Score=35.71  Aligned_cols=72  Identities=10%  Similarity=0.116  Sum_probs=43.6

Q ss_pred             EEEecCcchHHHHHHHHHHHcCC-EEEEEe--CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGC-YVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG  158 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~--~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g  158 (269)
                      |||+||+|=+|...+..+...|. +|++++  .+..+..... ++......+..   +....+.....- .++.++.+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999998888897 688875  2222333333 44433333322   333333332222 6778877664

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.13  E-value=0.18  Score=34.35  Aligned_cols=34  Identities=18%  Similarity=-0.002  Sum_probs=29.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS  113 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s  113 (269)
                      -+++|+|+|| |.+|.-++..+..+|+ .|+++.+.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            4678999998 9999999999999998 67787764

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.03  E-value=0.81  Score=34.83  Aligned_cols=101  Identities=17%  Similarity=0.096  Sum_probs=59.9

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce-eEecCChhhHHHHHHHHC--CCC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEADLNAALKRYF--PEG  149 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~-~~~~~~~~~~~~~i~~~~--~~~  149 (269)
                      +..++.+||=+.+  ++|...+.+++ .|++|+.++.|+...+.+++++   |... -+..... +..+.+++..  +..
T Consensus       129 ~~~~~~rVLdlf~--~tG~~sl~aa~-~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~-D~~~~l~~~~~~~~~  204 (309)
T d2igta1         129 TADRPLKVLNLFG--YTGVASLVAAA-AGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICE-DAMKFIQREERRGST  204 (309)
T ss_dssp             HSSSCCEEEEETC--TTCHHHHHHHH-TTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECS-CHHHHHHHHHHHTCC
T ss_pred             hccCCCeEEEecC--CCcHHHHHHHh-CCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeC-CHHHhHHHHhhcCCC
Confidence            4567889987765  33445555554 5889999999999988887544   3321 1222222 4444444322  238


Q ss_pred             ccEEEeC---CCc--------------hhHhhhHhhhhcCCEEEEEec
Q 024337          150 IDVYFEN---VGG--------------KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       150 ~d~vid~---~g~--------------~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      ||+||--   .+.              ..+..+..+++++|.++.+..
T Consensus       205 fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         205 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence            9988641   110              123456678888887665544

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=90.85  E-value=0.12  Score=36.01  Aligned_cols=29  Identities=17%  Similarity=0.194  Sum_probs=26.8

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      |+|.|| |+.|+.++..+...|.+|.++.+
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence            788898 99999999999999999999884

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.81  E-value=1.3  Score=33.67  Aligned_cols=101  Identities=18%  Similarity=0.191  Sum_probs=61.1

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCC
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPE  148 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~  148 (269)
                      ....++|++||=..| ++ |.=+.+++..++  ..+++.+.++.+.+.+++   ++|...+...... ...  + ....+
T Consensus       111 ~l~~~~g~~vlD~CA-ap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d-~~~--~-~~~~~  184 (313)
T d1ixka_         111 ALDPKPGEIVADMAA-AP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS-SLH--I-GELNV  184 (313)
T ss_dssp             HHCCCTTCEEEECCS-SC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC-GGG--G-GGGCC
T ss_pred             cccCCccceeeeccc-ch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccc-ccc--c-ccccc
Confidence            456899999987766 33 222344554443  489999999998876542   6677554433332 110  1 11234


Q ss_pred             CccEEEe---CCCchh--------------------------HhhhHhhhhcCCEEEEEec
Q 024337          149 GIDVYFE---NVGGKT--------------------------LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       149 ~~d~vid---~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  180 (269)
                      .||.|+-   |+|...                          +..++..++++|++|...-
T Consensus       185 ~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTC  245 (313)
T d1ixka_         185 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC  245 (313)
T ss_dssp             CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             cccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeec
Confidence            7886654   555321                          4678888889998876543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.74  E-value=0.06  Score=38.04  Aligned_cols=34  Identities=18%  Similarity=0.156  Sum_probs=30.1

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ++..|+|.|| |+.|+.++..+...|.+|+++.+.
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            4567999999 999999999999999999999754

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.55  E-value=0.12  Score=38.67  Aligned_cols=48  Identities=8%  Similarity=-0.207  Sum_probs=35.6

Q ss_pred             cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337           76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG  125 (269)
Q Consensus        76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g  125 (269)
                      +..+++++|-+|+ | .|......+.....+|++++-|+..++.+++.+.
T Consensus        51 g~~~g~~vLDiGc-G-~g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~   98 (263)
T d2g72a1          51 GEVSGRTLIDIGS-G-PTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ   98 (263)
T ss_dssp             SCSCCSEEEEETC-T-TCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCCCcEEEEecc-C-CCHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence            4457889999998 3 3555445555556699999999999999885554

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.53  E-value=0.11  Score=38.44  Aligned_cols=32  Identities=28%  Similarity=0.225  Sum_probs=28.9

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      |+|.|| |+.|++++..+...|.+|.++.+++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            788898 99999999999999999999997754

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.50  E-value=0.11  Score=38.14  Aligned_cols=32  Identities=19%  Similarity=0.158  Sum_probs=28.3

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD  115 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~  115 (269)
                      |+|.|| |..|++++..+...|.+|+++.+++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            678898 99999999999999999999997643

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=90.44  E-value=0.71  Score=31.62  Aligned_cols=94  Identities=20%  Similarity=0.175  Sum_probs=57.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCH--HHHHHHHHHcCC-----ce-----------------eEecCChh
Q 024337           82 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSK--DKVDLLKNKFGF-----DE-----------------AFNYKEEA  136 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~--~~~~~~~~~~g~-----~~-----------------~~~~~~~~  136 (269)
                      +|.|.|- |-+|.++.+.+.... .+|+++....  +....+. ++.-     +.                 +++..++.
T Consensus         3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~   80 (166)
T d1gado1           3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA   80 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChH
Confidence            5889998 999999999887664 5888777543  2333333 2211     00                 11111110


Q ss_pred             hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          137 DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       137 ~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      ++.  +.+   -++|+|+||+|. ...+.+...+..+-+-|.++.+.
T Consensus        81 ~i~--W~~---~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          81 NLK--WDE---VGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             GGC--HHH---HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             HCC--ccc---cCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            110  111   179999999996 77777888888887666665543

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=90.24  E-value=2.5  Score=31.85  Aligned_cols=52  Identities=19%  Similarity=0.219  Sum_probs=37.2

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCce
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDE  128 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~  128 (269)
                      ..+.+++.|+... +|..|.+++..|+..|.+.+++.+   ++.+.+.++ .+|+..
T Consensus        56 g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v  110 (310)
T d1y7la1          56 GTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVNL  110 (310)
T ss_dssp             TSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             CCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCce
Confidence            4457777666655 599999999999999996555543   344666666 788754

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.21  E-value=1.1  Score=30.31  Aligned_cols=86  Identities=10%  Similarity=0.058  Sum_probs=54.9

Q ss_pred             EEEEecCcchHHHH-HHHHHHHc-CCEEEEEe-CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337           82 CVFISAASGAVGQL-VGQFAKLL-GCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG  158 (269)
Q Consensus        82 ~vlI~ga~g~vG~~-~i~~a~~~-G~~V~~~~-~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  158 (269)
                      +|.|.|. |.+|.- .....+.. ++++++++ +++++.+.+.++++... ++     ++.+.+     ..+|+|+-|+.
T Consensus         3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~-----~~~~l~-----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD-----SLSSLA-----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS-----SHHHHH-----TTCSEEEECSC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc-----cchhhh-----hhccccccccc
Confidence            6889997 888864 56666554 67887766 44555555444777642 21     222222     24899998988


Q ss_pred             c-hhHhhhHhhhhcCCEEEEEec
Q 024337          159 G-KTLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       159 ~-~~~~~~~~~l~~~G~~v~~g~  180 (269)
                      . .+.+.+..+++.+-. |.+..
T Consensus        71 ~~~h~~~~~~al~~gk~-V~~EK   92 (164)
T d1tlta1          71 TASHFDVVSTLLNAGVH-VCVDK   92 (164)
T ss_dssp             TTHHHHHHHHHHHTTCE-EEEES
T ss_pred             chhccccccccccccce-eeccc
Confidence            6 677888888877654 44444

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=90.15  E-value=0.92  Score=31.19  Aligned_cols=43  Identities=16%  Similarity=0.010  Sum_probs=37.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF  126 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~  126 (269)
                      +|-|.|. |.+|...+..+...|.+|++.++++++.+.+. +.+.
T Consensus         3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~-~~~~   45 (178)
T d1pgja2           3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFM-KANA   45 (178)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-HHTT
T ss_pred             EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCC
Confidence            4778887 99999999999899999999999999998887 4443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.15  E-value=0.74  Score=29.98  Aligned_cols=64  Identities=13%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             HHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           68 YVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        68 ~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      ...| ..+++..-+.+++.-..-..-+++.++++.+|. ++++...+++..+.++ ++|++.+++..
T Consensus        55 ~~~l-~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          55 IKTL-EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HHHH-HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred             hhhh-hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence            3344 557788888877765556677888999999988 7888888888888888 99999988654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=89.93  E-value=0.3  Score=31.27  Aligned_cols=35  Identities=9%  Similarity=-0.031  Sum_probs=28.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHc---CCEEEEEeCCH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLL---GCYVVGSAGSK  114 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~---G~~V~~~~~s~  114 (269)
                      ..++++|.|| |.+|...++++..+   |.+|..+.+++
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            3579999999 99999988876554   78999998763

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.76  E-value=0.15  Score=36.58  Aligned_cols=30  Identities=23%  Similarity=0.173  Sum_probs=27.0

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|+ |+.|+.++..+..+|.+|.++...
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            677898 999999999999999999999864

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.69  E-value=1.4  Score=30.19  Aligned_cols=98  Identities=17%  Similarity=0.126  Sum_probs=57.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHcCCc-----eeEecCChh------h----HHHHHHH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGS--KDKVDLLKNKFGFD-----EAFNYKEEA------D----LNAALKR  144 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s--~~~~~~~~~~~g~~-----~~~~~~~~~------~----~~~~i~~  144 (269)
                      +|.|.|- |-+|.++.+.+...+.+|.++...  .+....+. ++.-.     ..+...+..      .    ......+
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            6889998 999999999888788888887743  22333343 22210     001000000      0    0000111


Q ss_pred             HC-CC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEecc
Q 024337          145 YF-PE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       145 ~~-~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .. .. ++|+|+||+|. ...+.+...++.+-+=|.++.+
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence            11 12 79999999996 6777778888877655666543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.51  E-value=0.26  Score=37.31  Aligned_cols=33  Identities=15%  Similarity=0.208  Sum_probs=30.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      ++.+|+|.|- |.+|..+++.+...|++|++++.
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            5789999998 99999999999999999998874

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=89.36  E-value=0.14  Score=39.12  Aligned_cols=33  Identities=21%  Similarity=0.210  Sum_probs=29.0

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      .++|||+||+|-+|..++..+...|..|+++..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~   34 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT   34 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC
Confidence            358999999999999999999989998887764

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.15  E-value=3.5  Score=31.18  Aligned_cols=105  Identities=18%  Similarity=0.197  Sum_probs=65.5

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCceeEecC------------------
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDEAFNYK------------------  133 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~~~~~~------------------  133 (269)
                      ..++++...+|...+|..|.+.+..++.+|.+++++.+   ++.+.+.++ .+|+.-+....                  
T Consensus        59 g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~  137 (320)
T d1z7wa1          59 GLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILAKT  137 (320)
T ss_dssp             TSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHHhC
Confidence            44566666677777799999999999999996665553   455677777 88875332110                  


Q ss_pred             ----------Ch-------hhHHHHHHHHCCCCccEEEeCCCc-hhHh---hhHhhhhcCCEEEEEec
Q 024337          134 ----------EE-------ADLNAALKRYFPEGIDVYFENVGG-KTLD---AVLPNMKIRGRIAACGM  180 (269)
Q Consensus       134 ----------~~-------~~~~~~i~~~~~~~~d~vid~~g~-~~~~---~~~~~l~~~G~~v~~g~  180 (269)
                                +.       .....++.+-..+.+|.++-++|+ ..+.   ..++...+.-+++-+..
T Consensus       138 ~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~  205 (320)
T d1z7wa1         138 PNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  205 (320)
T ss_dssp             TTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             CCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence                      00       011223333334478999999986 4433   44444556677776643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.03  E-value=0.45  Score=35.25  Aligned_cols=34  Identities=24%  Similarity=0.207  Sum_probs=30.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      -++.+|+|.|. |.+|..+++.+...|++|++++.
T Consensus        34 l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            36789999997 99999999999999999998874

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.02  E-value=0.19  Score=36.93  Aligned_cols=31  Identities=16%  Similarity=0.112  Sum_probs=27.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS  113 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s  113 (269)
                      .|+|.|| |..|+.++..++..|. +|+++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECC
Confidence            4899999 9999999999999997 69998865

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=88.85  E-value=1.8  Score=32.98  Aligned_cols=111  Identities=19%  Similarity=0.189  Sum_probs=65.3

Q ss_pred             HHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCceeEecCCh--------
Q 024337           67 AYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDEAFNYKEE--------  135 (269)
Q Consensus        67 a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~~~~~~~~--------  135 (269)
                      |++.+.....-.+...|+... +|..|.+++..++..|.+++++..   +..+.+.++ .+|+.-++.....        
T Consensus        62 a~~~i~~~~~~~~~~~vv~as-sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITAS-AGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEE-CSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecc-cchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence            445553333333444555544 599999999999999997666653   345667777 8887533211110        


Q ss_pred             -----------------------hhHHHHHHHHCCCCccEEEeCCCc-hh---HhhhHhhhhcCCEEEEEec
Q 024337          136 -----------------------ADLNAALKRYFPEGIDVYFENVGG-KT---LDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       136 -----------------------~~~~~~i~~~~~~~~d~vid~~g~-~~---~~~~~~~l~~~G~~v~~g~  180 (269)
                                             ......+.+-. +.+|.+|-++|+ ..   +...++.+.+.-+++.+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~  210 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  210 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence                                   01112222221 369999999986 33   3455555667778887743

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=88.75  E-value=1.5  Score=31.73  Aligned_cols=93  Identities=12%  Similarity=-0.005  Sum_probs=57.7

Q ss_pred             CEEEEecCcch----HHHHHHHHHHHc--CCEEEEEe-CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEE
Q 024337           81 ECVFISAASGA----VGQLVGQFAKLL--GCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        81 ~~vlI~ga~g~----vG~~~i~~a~~~--G~~V~~~~-~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      =+|.|.|. |.    ++...+...+..  ++++++++ ++.++.+.+.++++....-.++   ++.+.+.+   ..+|+|
T Consensus        17 irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~---~~iD~V   89 (237)
T d2nvwa1          17 IRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD---SLESFAQY---KDIDMI   89 (237)
T ss_dssp             EEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES---CHHHHHHC---TTCSEE
T ss_pred             eEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec---chhhcccc---ccccee
Confidence            47899997 43    444445555543  56888655 5566665554477765433333   33333332   369999


Q ss_pred             EeCCCc-hhHhhhHhhhhcC-----CEEEEEec
Q 024337          154 FENVGG-KTLDAVLPNMKIR-----GRIAACGM  180 (269)
Q Consensus       154 id~~g~-~~~~~~~~~l~~~-----G~~v~~g~  180 (269)
                      +.|+.. .+.+.+..+|..+     ++-|.+..
T Consensus        90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             EECSCHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             eccCCCcchhhHHHHHHHhcccccCCceEEEec
Confidence            999996 6777778888765     45566655

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.63  E-value=0.16  Score=38.15  Aligned_cols=31  Identities=23%  Similarity=0.175  Sum_probs=28.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      +|+|.|| |..|+.++..++..|.+|+++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            4899998 999999999999999999999865

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.21  E-value=0.26  Score=35.27  Aligned_cols=30  Identities=13%  Similarity=-0.002  Sum_probs=27.4

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|| |+.|+.++..|..+|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            678898 999999999999999999999864

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.05  E-value=0.25  Score=35.46  Aligned_cols=30  Identities=27%  Similarity=0.265  Sum_probs=27.2

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ++|.|+ |+.|+.++..+..+|.+|.++.+.
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            678898 999999999999999999999854

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.05  E-value=0.088  Score=36.96  Aligned_cols=91  Identities=13%  Similarity=0.119  Sum_probs=50.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeC-CH-----HHHHHHHHHc-CCc--eeEecCChhhHHHHHHHHCCCCcc
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAG-SK-----DKVDLLKNKF-GFD--EAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~-s~-----~~~~~~~~~~-g~~--~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      +|.|.||||-+|+..++++..+ ..++..+.. +.     ++.......+ +..  ......+.        ......+|
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d   74 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV--------RDFSADVD   74 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG--------GGTCTTCC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh--------hhhhcccc
Confidence            6899999999999999999988 556655432 11     1122111011 111  11111111        00112689


Q ss_pred             EEEeCCCchhHhhh-HhhhhcCCEEEEEec
Q 024337          152 VYFENVGGKTLDAV-LPNMKIRGRIAACGM  180 (269)
Q Consensus       152 ~vid~~g~~~~~~~-~~~l~~~G~~v~~g~  180 (269)
                      ++|-|.+....... -..+..+-+++..+.
T Consensus        75 vvf~alp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          75 VVFLATAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             eeeccccchhHHHHhhhhhhcCceeecccc
Confidence            99999997544444 444555556666543

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=88.01  E-value=2.7  Score=31.39  Aligned_cols=44  Identities=20%  Similarity=0.314  Sum_probs=32.4

Q ss_pred             EEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCce
Q 024337           84 FISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDE  128 (269)
Q Consensus        84 lI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~  128 (269)
                      ++...+|..|.+++..++.+|.+.+++.+   ++.+.+.++ .+|+.-
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~GA~V  104 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLK-MLGAEL  104 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccc-cCCcEE
Confidence            56666799999999999999985444442   455677777 888753

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.86  E-value=1.4  Score=34.62  Aligned_cols=62  Identities=18%  Similarity=0.088  Sum_probs=43.0

Q ss_pred             hHHHHHHHh-hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCcee
Q 024337           66 TAYVGFYEV-CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDEA  129 (269)
Q Consensus        66 ~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~~  129 (269)
                      .|++++.+. .+++++.+| |...+|..|.+.+..|+.+|.+++++.+   ++.+.+.++ .+|+.-+
T Consensus       129 ~A~~~i~~A~~~~~~g~~V-VeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ir-a~GAeVi  194 (382)
T d1wkva1         129 PAVEIISRLSRRVEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPR-LLGAQVI  194 (382)
T ss_dssp             HHHHHHHHHTTTSCTTCEE-EEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHH-HTTCEEE
T ss_pred             HHHHHHHHHHhccCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEeecccccccccccc-ccCccee
Confidence            344445332 346777764 4455699999999999999997777664   445677777 8888643

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.77  E-value=0.32  Score=34.73  Aligned_cols=30  Identities=23%  Similarity=0.185  Sum_probs=26.6

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ++|.|+ |+.|+.++..|...|.+|.++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            567798 999999999999999999999754

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=87.65  E-value=3.5  Score=31.64  Aligned_cols=96  Identities=15%  Similarity=0.068  Sum_probs=61.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccEE
Q 024337           78 KHGECVFISAASGAVGQLVGQFA-KLLGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDVY  153 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a-~~~G~-~V~~~~~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~v  153 (269)
                      +..+++.|+|+ |..+...++.. ..++. +|.+.++++++.+.+.+++...  .-+...+  +..+.++     +.|++
T Consensus       126 ~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~--s~~eav~-----~ADIi  197 (340)
T d1x7da_         126 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS--SVAEAVK-----GVDII  197 (340)
T ss_dssp             TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS--SHHHHHT-----TCSEE
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC--CHHHHHh-----cCCce
Confidence            34578999998 88898887755 55677 9999999988766544355331  1222222  4444554     48999


Q ss_pred             EeCCCch--hHhhhHhhhhcCCEEEEEecc
Q 024337          154 FENVGGK--TLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       154 id~~g~~--~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      +-|+...  .--.-.+.++++-++..+|..
T Consensus       198 ~t~Tas~s~~Pv~~~~~l~pG~hI~aiGs~  227 (340)
T d1x7da_         198 TTVTADKAYATIITPDMLEPGMHLNAVGGD  227 (340)
T ss_dssp             EECCCCSSEEEEECGGGCCTTCEEEECSCC
T ss_pred             eeccccCCCCcccchhhcCCCCEEeecccc
Confidence            9877542  111223568888888888764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.56  E-value=1.5  Score=29.28  Aligned_cols=94  Identities=14%  Similarity=0.142  Sum_probs=52.2

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGIDVYF  154 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi  154 (269)
                      +|.+||=.++  |+|.+.+..+. .|+ +|+.++.+++..+.+++   .++...-+..-.. +..+.+.. ..++||+||
T Consensus        14 ~g~~vlDl~~--GtG~~~iea~~-rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~-D~~~~l~~-~~~~fDiIf   88 (152)
T d2esra1          14 NGGRVLDLFA--GSGGLAIEAVS-RGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM-EAERAIDC-LTGRFDLVF   88 (152)
T ss_dssp             CSCEEEEETC--TTCHHHHHHHH-TTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS-CHHHHHHH-BCSCEEEEE
T ss_pred             CCCeEEEcCC--ccCHHHHHHHH-hCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc-cccccccc-cccccceeE
Confidence            5788887764  44445555444 576 99999999888776654   3354322221122 44444433 345899887


Q ss_pred             eCCC-c-hhHhhhH------hhhhcCCEEEE
Q 024337          155 ENVG-G-KTLDAVL------PNMKIRGRIAA  177 (269)
Q Consensus       155 d~~g-~-~~~~~~~------~~l~~~G~~v~  177 (269)
                      ---+ . ......+      +.|+++|.++.
T Consensus        89 ~DPPy~~~~~~~~l~~i~~~~~L~~~g~iii  119 (152)
T d2esra1          89 LDPPYAKETIVATIEALAAKNLLSEQVMVVC  119 (152)
T ss_dssp             ECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             echhhccchHHHHHHHHHHCCCcCCCeEEEE
Confidence            5433 1 2222222      34666676654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.50  E-value=0.67  Score=32.81  Aligned_cols=39  Identities=28%  Similarity=0.350  Sum_probs=35.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      +|.|+|. |=+|+.++..+...|.+|++++.++++.+.+.
T Consensus         2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            5889998 99999999999999999999999988888775

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.39  E-value=0.31  Score=35.26  Aligned_cols=31  Identities=23%  Similarity=0.047  Sum_probs=27.6

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      |+|.|+ |+.|+.++..+...|.+|.++.+.+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            678898 9999999999999999999998643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.34  E-value=0.28  Score=35.50  Aligned_cols=31  Identities=13%  Similarity=0.161  Sum_probs=27.6

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      |+|+|+ |-.|+.++..+...|.+|.++.+.+
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            678898 9999999999999999999999753

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.32  E-value=0.25  Score=37.62  Aligned_cols=32  Identities=22%  Similarity=0.072  Sum_probs=28.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      .|+|+|| |..|++++..++..|.+|.+..+.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            4899999 9999999999999999999998653

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.26  E-value=0.29  Score=34.40  Aligned_cols=32  Identities=13%  Similarity=0.091  Sum_probs=28.2

Q ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      ...|+|.|| |+.|+.++..+...|.+++++.+
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECC
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEe
Confidence            357999999 99999999999999999988874

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.20  E-value=1.6  Score=30.91  Aligned_cols=102  Identities=18%  Similarity=0.211  Sum_probs=65.8

Q ss_pred             HHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHH
Q 024337           67 AYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNA  140 (269)
Q Consensus        67 a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~  140 (269)
                      -|..++.  +  .+..+|=.|.  |.|..++.+|+.. ...+++++.++.....+.+   +.+...  ++..+.. ++  
T Consensus        23 ~w~~~f~--~--~~plvLdIGc--G~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~-~l--   93 (204)
T d1yzha1          23 KWRDLFG--N--DNPIHVEVGS--GKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS-DL--   93 (204)
T ss_dssp             THHHHHT--S--CCCEEEEESC--TTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS-CG--
T ss_pred             cHHHHcC--C--CCCeEEEEec--cCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHH-HH--
Confidence            3555543  2  3456777785  7799999999987 6699999999887665532   455542  3333322 22  


Q ss_pred             HHHHHCC-CCccEEEeCCCc---------------hhHhhhHhhhhcCCEEEEEe
Q 024337          141 ALKRYFP-EGIDVYFENVGG---------------KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       141 ~i~~~~~-~~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~~g  179 (269)
                        .+..+ +.+|.++-....               ..++...+.|+++|.+....
T Consensus        94 --~~~~~~~~~~~i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~T  146 (204)
T d1yzha1          94 --TDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT  146 (204)
T ss_dssp             --GGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred             --hhhccCCceehhcccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence              22233 378877655432               34677889999999987653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=87.08  E-value=3.4  Score=28.52  Aligned_cols=102  Identities=17%  Similarity=0.185  Sum_probs=64.8

Q ss_pred             hhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCcc
Q 024337           74 VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGID  151 (269)
Q Consensus        74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d  151 (269)
                      ...++++..+ |-+.-|+-|+ +..+++. +.+|+++++.++....++ ..-..  ..+..+-. ++.+.+.....+++|
T Consensus        13 ~l~~~~g~~~-vD~T~G~GGh-s~~iL~~-~~~viaiD~D~~ai~~a~-~~~~~~~~~~~~~f~-~~~~~l~~~~~~~vd   87 (182)
T d1wg8a2          13 LLAVRPGGVY-VDATLGGAGH-ARGILER-GGRVIGLDQDPEAVARAK-GLHLPGLTVVQGNFR-HLKRHLAALGVERVD   87 (182)
T ss_dssp             HHTCCTTCEE-EETTCTTSHH-HHHHHHT-TCEEEEEESCHHHHHHHH-HTCCTTEEEEESCGG-GHHHHHHHTTCSCEE
T ss_pred             hcCCCCCCEE-EEeCCCCcHH-HHHHhcc-cCcEEEEhhhhhHHHHHh-hccccceeEeehHHH-HHHHHHHHcCCCccC
Confidence            3457888875 4444455555 4455554 679999999999988887 44322  24444433 566655554444788


Q ss_pred             EE-EeCCCc-h---------------hHhhhHhhhhcCCEEEEEecc
Q 024337          152 VY-FENVGG-K---------------TLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       152 ~v-id~~g~-~---------------~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      .| +|. |- .               .+..+.+.++++|+++.+..+
T Consensus        88 gIl~DL-GvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fh  133 (182)
T d1wg8a2          88 GILADL-GVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFH  133 (182)
T ss_dssp             EEEEEC-SCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred             EEEEEc-cCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecc
Confidence            55 454 42 1               356677888899998887664

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=86.99  E-value=0.3  Score=36.27  Aligned_cols=30  Identities=7%  Similarity=0.085  Sum_probs=27.6

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|| |.+|+.++..+...|.+|+++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788898 999999999999999999999975

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.94  E-value=3.1  Score=31.59  Aligned_cols=90  Identities=10%  Similarity=0.028  Sum_probs=59.9

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKL-LGC-YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~-~G~-~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      +..+++.|+|+ |..+...++.+.. +.. +|.+..+++++.+.+.+   ..+.....  +    ..+.+.     +.|+
T Consensus       123 ~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~--~----~~~a~~-----~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV--Q----PAEEAS-----RCDV  190 (320)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEE--C----CHHHHT-----SSSE
T ss_pred             CCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcccc--c----hhhhhc-----cccE
Confidence            34578899987 9999888877765 455 99999999887654432   33333222  1    122232     4899


Q ss_pred             EEeCCCc--hhHhhhHhhhhcCCEEEEEecc
Q 024337          153 YFENVGG--KTLDAVLPNMKIRGRIAACGMI  181 (269)
Q Consensus       153 vid~~g~--~~~~~~~~~l~~~G~~v~~g~~  181 (269)
                      |+-|+.+  ..+.  .+.++++-++..+|..
T Consensus       191 V~taT~s~~P~~~--~~~l~~G~hv~~iGs~  219 (320)
T d1omoa_         191 LVTTTPSRKPVVK--AEWVEEGTHINAIGAD  219 (320)
T ss_dssp             EEECCCCSSCCBC--GGGCCTTCEEEECSCC
T ss_pred             EEEeccCcccccc--hhhcCCCCeEeecCCc
Confidence            9999986  3333  3468898888888774

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=86.93  E-value=0.45  Score=30.40  Aligned_cols=35  Identities=9%  Similarity=-0.051  Sum_probs=28.4

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcC---CEEEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLG---CYVVGSAGS  113 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G---~~V~~~~~s  113 (269)
                      +..++++|.|| |.+|..++..++.+|   .+|+.+.++
T Consensus        18 ~~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          18 EPPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             SCCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             hcCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            34579999999 999999888877665   479998865

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=86.88  E-value=0.22  Score=38.43  Aligned_cols=30  Identities=20%  Similarity=0.144  Sum_probs=25.4

Q ss_pred             EEEecCcchHHHHHHHHHH-----HcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAK-----LLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~-----~~G~~V~~~~~s  113 (269)
                      |+|.|| |..|++++..+.     ..|.+|.++.+.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~   44 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKR   44 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCC
Confidence            789999 999999888874     569999988865

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.82  E-value=1.2  Score=30.05  Aligned_cols=45  Identities=18%  Similarity=0.217  Sum_probs=36.5

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG  125 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g  125 (269)
                      +|+++.|++.+||.|.+++..+...|.++  ...+++..+.+++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp   46 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLP   46 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCC
Confidence            58899999999999999999999999765  4457777777774444

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.69  E-value=0.31  Score=36.97  Aligned_cols=30  Identities=20%  Similarity=0.147  Sum_probs=27.3

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|+ |..|+.++..|...|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            788898 999999999999999999999864

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=86.65  E-value=2.8  Score=29.68  Aligned_cols=91  Identities=13%  Similarity=0.097  Sum_probs=60.7

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCc--eeEecCChhhHHHHHHHHCCC-Ccc
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFD--EAFNYKEEADLNAALKRYFPE-GID  151 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~--~~~~~~~~~~~~~~i~~~~~~-~~d  151 (269)
                      ++++++=.|..+  |.=.+-+|-.+ ..+++.++.+..+..++++   +++..  .+++.+.. +       .... .||
T Consensus        65 ~~~~ilDiGsGa--G~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E-~-------~~~~~~fD  134 (207)
T d1jsxa_          65 QGERFIDVGTGP--GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVE-E-------FPSEPPFD  134 (207)
T ss_dssp             CSSEEEEETCTT--TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTT-T-------SCCCSCEE
T ss_pred             cCCceeeeeccC--CceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchh-h-------hccccccc
Confidence            467888888644  44444444333 5799999999998877753   66765  35554443 2       2223 799


Q ss_pred             EEEe-CCCc--hhHhhhHhhhhcCCEEEEEe
Q 024337          152 VYFE-NVGG--KTLDAVLPNMKIRGRIAACG  179 (269)
Q Consensus       152 ~vid-~~g~--~~~~~~~~~l~~~G~~v~~g  179 (269)
                      +|.. +++.  ..+..+...++++|+++.+-
T Consensus       135 ~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~K  165 (207)
T d1jsxa_         135 GVISRAFASLNDMVSWCHHLPGEQGRFYALK  165 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred             eehhhhhcCHHHHHHHHHHhcCCCcEEEEEC
Confidence            8874 4444  56778888899999998873

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.55  E-value=0.33  Score=34.95  Aligned_cols=30  Identities=23%  Similarity=0.228  Sum_probs=26.9

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|+ |+.|+.++..|..+|.+|.++...
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            678898 999999999999999999999854

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=86.53  E-value=1.8  Score=29.62  Aligned_cols=93  Identities=17%  Similarity=0.194  Sum_probs=57.0

Q ss_pred             EEEEecCcchHHHHHHHHHHHc---CCEEEEEeCC--HHHHHHHHHHcCC-----ce-----------------eEecCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLL---GCYVVGSAGS--KDKVDLLKNKFGF-----DE-----------------AFNYKE  134 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~---G~~V~~~~~s--~~~~~~~~~~~g~-----~~-----------------~~~~~~  134 (269)
                      +|.|.|- |-+|.++.+.+...   +.+|+++...  .+....+. ++.-     ..                 +++.++
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLl-kyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL-KYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH-HCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHH-hccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            6899998 99999999877543   4688877643  34444444 3311     00                 111111


Q ss_pred             hhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          135 EADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       135 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      +    +.+.+  ++ ++|+|+||+|. ...+.+...+..+-+-|.++.+.
T Consensus        80 p----~~i~W--~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          80 P----SKLPW--KDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             G----GGSCH--HHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             h----hhCCc--cccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            1    11110  12 69999999996 77788888888876666665543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.50  E-value=0.26  Score=37.46  Aligned_cols=32  Identities=19%  Similarity=0.120  Sum_probs=28.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK  114 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~  114 (269)
                      -|+|.|| |..|+.++..+...|.+|.++..++
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            3789998 9999999999998999999999653

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.45  E-value=5  Score=29.85  Aligned_cols=51  Identities=22%  Similarity=0.221  Sum_probs=35.7

Q ss_pred             hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCc
Q 024337           75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFD  127 (269)
Q Consensus        75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~  127 (269)
                      ..++++..|+. ..+|..|.+++..++.+|.+++++..   ++.+...++ .+|+.
T Consensus        56 g~~~~~~~vv~-assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~ga~  109 (302)
T d1fcja_          56 GVLKPGVELVE-PTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLK-ALGAN  109 (302)
T ss_dssp             TCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred             CCCCCCceEEE-eccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHH-Hhccc
Confidence            45666666555 44599999999999999985555442   445666666 77764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=86.38  E-value=1.4  Score=29.29  Aligned_cols=63  Identities=11%  Similarity=0.044  Sum_probs=50.6

Q ss_pred             HHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337           69 VGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFGFDEAFNYK  133 (269)
Q Consensus        69 ~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~g~~~~~~~~  133 (269)
                      ..| +.+++..-+.+++.-..-..-.+++..++.++  .++++...+++..+.++ ++|++.+++..
T Consensus        62 ~~L-~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~Gad~vi~p~  126 (153)
T d1id1a_          62 SVL-KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIK-MVHPDIILSPQ  126 (153)
T ss_dssp             HHH-HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHH-TTCCSEEECHH
T ss_pred             HHH-HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHH-HCCCCEEECHH
Confidence            344 66888888888887766677788888888764  38999998999999998 99999988653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=86.19  E-value=3.2  Score=28.26  Aligned_cols=73  Identities=19%  Similarity=0.205  Sum_probs=43.9

Q ss_pred             CCCEEEEecCcchHHHHH---HHHHHH--c-CCEEEEEeCCHHHHHHH----H---HHcCCceeEecCChhhHHHHHHHH
Q 024337           79 HGECVFISAASGAVGQLV---GQFAKL--L-GCYVVGSAGSKDKVDLL----K---NKFGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~---i~~a~~--~-G~~V~~~~~s~~~~~~~----~---~~~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      |+-+|.|.|| |.+|...   ..+++.  . +.++..++.++++.+..    +   ..++...-+....  +..+.+.  
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t--d~~eaL~--   75 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM--NLDDVII--   75 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES--CHHHHHT--
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC--Chhhccc--
Confidence            5678999998 8888442   223332  2 34999999988865431    1   1344433332222  4444443  


Q ss_pred             CCCCccEEEeCCCc
Q 024337          146 FPEGIDVYFENVGG  159 (269)
Q Consensus       146 ~~~~~d~vid~~g~  159 (269)
                         +.|+|+.+.+.
T Consensus        76 ---dad~Vv~~~~~   86 (171)
T d1obba1          76 ---DADFVINTAMV   86 (171)
T ss_dssp             ---TCSEEEECCCT
T ss_pred             ---CCCeEeeeccc
Confidence               58999999874

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=86.11  E-value=3.7  Score=28.05  Aligned_cols=99  Identities=15%  Similarity=0.068  Sum_probs=57.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHc----CCEEEEEeC--CHHHHHHHHHHcCCc-----e---------eEecCChh-hHHH
Q 024337           82 CVFISAASGAVGQLVGQFAKLL----GCYVVGSAG--SKDKVDLLKNKFGFD-----E---------AFNYKEEA-DLNA  140 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~----G~~V~~~~~--s~~~~~~~~~~~g~~-----~---------~~~~~~~~-~~~~  140 (269)
                      +|.|.|- |-+|.++.+.+-..    ..+|+++..  +.+....+. ++.-.     .         .++...-. ....
T Consensus         3 kigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~   80 (173)
T d1obfo1           3 RVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR   80 (173)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence            6889998 99999988876432    347777773  333444443 22110     0         11100000 0000


Q ss_pred             HHHHHC-CC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          141 ALKRYF-PE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       141 ~i~~~~-~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      ...++. .+ ++|+|+||+|. .....+...|..+-+-|++..+.
T Consensus        81 ~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             CHHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            111111 23 89999999996 77778888898887777776543

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.99  E-value=0.46  Score=33.88  Aligned_cols=30  Identities=17%  Similarity=0.155  Sum_probs=26.7

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ++|.|+ |+.|+.++..+..+|.+|.++...
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            567798 999999999999999999999753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.86  E-value=0.38  Score=36.87  Aligned_cols=30  Identities=20%  Similarity=0.209  Sum_probs=27.3

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|+|| |..|+.++..++..|.+|+++..+
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            678898 999999999999999999999854

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=85.73  E-value=1.6  Score=29.79  Aligned_cols=73  Identities=15%  Similarity=0.145  Sum_probs=42.5

Q ss_pred             CCCEEEEecCcchHH--HHHHHHHHHc-C---CEEEEEeCCHHHHHHHH-------HHcCCceeEecCChhhHHHHHHHH
Q 024337           79 HGECVFISAASGAVG--QLVGQFAKLL-G---CYVVGSAGSKDKVDLLK-------NKFGFDEAFNYKEEADLNAALKRY  145 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG--~~~i~~a~~~-G---~~V~~~~~s~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~i~~~  145 (269)
                      +.-+|.|.|| |++|  .+...+++.. .   .+++.++.++++.+...       ..++....+....  +..+.++  
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~eal~--   76 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEEAFT--   76 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHHHHS--
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--ChhhccC--
Confidence            4457889998 6555  3344444433 2   38999998888765221       1233332222222  4444443  


Q ss_pred             CCCCccEEEeCCCc
Q 024337          146 FPEGIDVYFENVGG  159 (269)
Q Consensus       146 ~~~~~d~vid~~g~  159 (269)
                         +.|+|+.++|-
T Consensus        77 ---~AD~Vvitag~   87 (167)
T d1u8xx1          77 ---DVDFVMAHIRV   87 (167)
T ss_dssp             ---SCSEEEECCCT
T ss_pred             ---CCCEEEECCCc
Confidence               58999999984

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.66  E-value=2.6  Score=28.63  Aligned_cols=94  Identities=20%  Similarity=0.151  Sum_probs=58.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHcCCc------e----------------eEecCCh
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAG---SKDKVDLLKNKFGFD------E----------------AFNYKEE  135 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~---s~~~~~~~~~~~g~~------~----------------~~~~~~~  135 (269)
                      +|.|.|- |-+|.++.+.+... ..+|.++..   +.+....+. ++.-.      .                ++..+++
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p   79 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCcEEEEEeCCCh
Confidence            6889998 99999999888654 458887763   244555554 33210      0                1111111


Q ss_pred             hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          136 ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       136 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      ++..  +.+   .++|+|+||+|. ...+.+...+..+.+-|.+..+.
T Consensus        80 ~~i~--W~~---~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          80 SQIP--WGK---CQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             GGCC--HHH---HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             HHcc--ccc---cCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            0110  111   179999999996 67777888888887666665543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.44  E-value=1.8  Score=27.95  Aligned_cols=86  Identities=15%  Similarity=0.171  Sum_probs=48.4

Q ss_pred             CCCEEEEecCcch-----------HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-EecCChhhHHHHHHHHC
Q 024337           79 HGECVFISAASGA-----------VGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYF  146 (269)
Q Consensus        79 ~~~~vlI~ga~g~-----------vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~  146 (269)
                      ..++|||+|+ |+           .+..++..+|..|.+++.+..+++....-. .+ ++.+ +..-.. +....+.+. 
T Consensus         6 ~~kkvlilGs-Gp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~-d~-aD~lYfePlt~-e~v~~Ii~~-   80 (127)
T d1a9xa3           6 DIKSILILGA-GPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP-EM-ADATYIEPIHW-EVVRKIIEK-   80 (127)
T ss_dssp             SCCEEEEECC-CSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG-GG-SSEEECSCCCH-HHHHHHHHH-
T ss_pred             CCCEEEEECC-CcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh-hh-cceeeeecCCH-HHHHHHHHH-
Confidence            4578999997 53           234444555667999999998877543221 11 1222 222222 233333221 


Q ss_pred             CCCccEEEeCCCc-hhHhhhHhhhh
Q 024337          147 PEGIDVYFENVGG-KTLDAVLPNMK  170 (269)
Q Consensus       147 ~~~~d~vid~~g~-~~~~~~~~~l~  170 (269)
                       +++|.++-+.|+ -.++.+.++.+
T Consensus        81 -E~pd~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          81 -ERPDAVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             -HCCSEEECSSSHHHHHHHHHHHHH
T ss_pred             -hCcCCeEEEeeeehHhHHHHHHHH
Confidence             368999988888 45555555443

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=85.36  E-value=2.3  Score=28.99  Aligned_cols=99  Identities=13%  Similarity=0.080  Sum_probs=58.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHcCCce--------------eEecCChh-hHHHHH
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAG---SKDKVDLLKNKFGFDE--------------AFNYKEEA-DLNAAL  142 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~---s~~~~~~~~~~~g~~~--------------~~~~~~~~-~~~~~i  142 (269)
                      +|.|.|- |-+|.++.+.+... ..+++++..   +.+....+. ++...+              .++...-. ......
T Consensus         3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p   80 (169)
T d1u8fo1           3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP   80 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEEEEEECCCh
Confidence            6899998 99999999877654 468887754   344555555 332100              11100000 000001


Q ss_pred             HHHC-CC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          143 KRYF-PE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       143 ~~~~-~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      .++. .. ++|+|+||+|. ...+.+...+..+-+-|.+..+.
T Consensus        81 ~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          81 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            1211 23 79999999996 67777778888887767765543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.33  E-value=0.42  Score=36.74  Aligned_cols=33  Identities=15%  Similarity=-0.033  Sum_probs=27.0

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSK  114 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~  114 (269)
                      ++|+|.|| |..|++++..++..|  .+|++..+++
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            68999999 999998887666555  4999998764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=85.16  E-value=0.33  Score=37.52  Aligned_cols=31  Identities=10%  Similarity=0.083  Sum_probs=25.5

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEe
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSA  111 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~  111 (269)
                      .+|||+||+|-+|...+..+...|.  +|++++
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d   35 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD   35 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEe
Confidence            5799999999999999988877776  455554

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.78  E-value=0.5  Score=35.11  Aligned_cols=30  Identities=20%  Similarity=0.207  Sum_probs=27.2

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|| |-+|+.++.-+...|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788898 999999999999999999999864

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=84.75  E-value=1.1  Score=29.84  Aligned_cols=38  Identities=24%  Similarity=0.163  Sum_probs=31.3

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKV  117 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~  117 (269)
                      +..+|.|.|+ |.+|...+..+...|.  +++.++..+++.
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            3568999997 9999999988888774  899999877643

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.69  E-value=0.39  Score=36.64  Aligned_cols=30  Identities=27%  Similarity=0.275  Sum_probs=27.3

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|+ |..|+.++.-|...|++|+++...
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788898 999999999999999999999854

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.55  E-value=0.56  Score=33.73  Aligned_cols=34  Identities=12%  Similarity=-0.042  Sum_probs=27.6

Q ss_pred             CEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKD  115 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~  115 (269)
                      .+|+|.|| |+.|+.++..++..  |.+|++..+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            37999998 99999999876544  779999987644

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.55  E-value=0.53  Score=33.54  Aligned_cols=29  Identities=21%  Similarity=0.154  Sum_probs=26.2

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      |+|.|+ |+-|+.++..|...|.+|.++..
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~   34 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEK   34 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEec
Confidence            567788 99999999999999999999985

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=83.99  E-value=0.9  Score=31.10  Aligned_cols=82  Identities=16%  Similarity=0.207  Sum_probs=54.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-  159 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  159 (269)
                      +|.|+|. |.+|...+..++.. ++++++++....+      .........+.+   .    ... ...+|+|+.|++. 
T Consensus         5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~------~~~~~~~~~~~~---~----~~~-~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRAT------LDTKTPVFDVAD---V----DKH-ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSC------CSSSSCEEEGGG---G----GGT-TTTCSEEEECSCTT
T ss_pred             eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccc------cccccccccchh---h----hhh-ccccceEEEeCCCc
Confidence            6899997 99999888888765 5677777644321      111122332222   1    111 1259999999997 


Q ss_pred             hhHhhhHhhhhcCCEEEEE
Q 024337          160 KTLDAVLPNMKIRGRIAAC  178 (269)
Q Consensus       160 ~~~~~~~~~l~~~G~~v~~  178 (269)
                      .+.+.+.++|..|-.++..
T Consensus        70 ~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          70 TDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             THHHHHHHHHTTTSEEECC
T ss_pred             ccHHHHHHHHHCCCcEEEe
Confidence            6788899999998887754

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=83.98  E-value=2  Score=29.64  Aligned_cols=103  Identities=15%  Similarity=0.195  Sum_probs=56.5

Q ss_pred             HHHHHhh-cCCCCCEEEEecC-cchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHH
Q 024337           69 VGFYEVC-SAKHGECVFISAA-SGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAAL  142 (269)
Q Consensus        69 ~~l~~~~-~~~~~~~vlI~ga-~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i  142 (269)
                      .++++.. ....+.+||=..+ +|++|+   ..+. .|+ +|+.++.+.+..+.++++   ++...-+..... +..+.+
T Consensus        30 ealFn~l~~~~~~~~vLDlfaGsG~~g~---ea~s-rGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~-D~~~~l  104 (182)
T d2fhpa1          30 ESIFNMIGPYFDGGMALDLYSGSGGLAI---EAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM-DANRAL  104 (182)
T ss_dssp             HHHHHHHCSCCSSCEEEETTCTTCHHHH---HHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEcccccccccc---eeee-cchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccc-cchhhh
Confidence            3444443 3456888876654 445555   4444 577 899999999988877643   344321111111 444444


Q ss_pred             HHHC-CC-CccEEEeCCCc------hhHhhhHh--hhhcCCEEE
Q 024337          143 KRYF-PE-GIDVYFENVGG------KTLDAVLP--NMKIRGRIA  176 (269)
Q Consensus       143 ~~~~-~~-~~d~vid~~g~------~~~~~~~~--~l~~~G~~v  176 (269)
                      ++.. .+ +||+||---+.      ..+....+  .|+++|.++
T Consensus       105 ~~~~~~~~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~giIi  148 (182)
T d2fhpa1         105 EQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIV  148 (182)
T ss_dssp             HHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhhcccCCCcceEEechhhhhhHHHHHHHHHHHCCCCCCCEEEE
Confidence            4432 23 89988754431      23333332  467777555

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.72  E-value=2.2  Score=27.28  Aligned_cols=88  Identities=14%  Similarity=0.104  Sum_probs=47.0

Q ss_pred             CCCEEEEecCcch-----------HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-cee-EecCChhhHHHHHHHH
Q 024337           79 HGECVFISAASGA-----------VGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEA-FNYKEEADLNAALKRY  145 (269)
Q Consensus        79 ~~~~vlI~ga~g~-----------vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~i~~~  145 (269)
                      ..++|||+|+ |+           .+..+++.+|..|.+++.+..+++....   .+.. +++ |..-.. +....+.+.
T Consensus         3 ~~kkvlViGs-Gp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst---d~d~aD~lYfeplt~-e~v~~Ii~~   77 (121)
T d1a9xa4           3 DREKIMVLGG-GPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST---DYDTSDRLYFEPVTL-EDVLEIVRI   77 (121)
T ss_dssp             SSCEEEEECC-CSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT---STTSSSEEECCCCSH-HHHHHHHHH
T ss_pred             CCCEEEEECC-CcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc---ChhhcCceEEccCCH-HHHHHHHHH
Confidence            3568999997 53           2344555556679999999988774432   1122 222 222222 222222221


Q ss_pred             CCCCccEEEeCCCchhHhhhHhhhhcCC
Q 024337          146 FPEGIDVYFENVGGKTLDAVLPNMKIRG  173 (269)
Q Consensus       146 ~~~~~d~vid~~g~~~~~~~~~~l~~~G  173 (269)
                        +++|.++-..|+.........|.+.|
T Consensus        78 --E~p~~ii~~~GGQtalnla~~L~~~g  103 (121)
T d1a9xa4          78 --EKPKGVIVQYGGQTPLKLARALEAAG  103 (121)
T ss_dssp             --HCCSEEECSSSTHHHHTTHHHHHHTT
T ss_pred             --hCCCEEEeehhhhhHHHHHHHHHHcC
Confidence              36788888888744333333344444

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.40  E-value=1.5  Score=31.86  Aligned_cols=35  Identities=29%  Similarity=0.375  Sum_probs=29.5

Q ss_pred             CCCCEEEEecCcchHHHHHHHHH-HHcCCEEEEEeCC
Q 024337           78 KHGECVFISAASGAVGQLVGQFA-KLLGCYVVGSAGS  113 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a-~~~G~~V~~~~~s  113 (269)
                      -++.+|+|.|. |.+|..+++.+ +..|++|++++.+
T Consensus        29 l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          29 PKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             TTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeecC
Confidence            46889999997 99999999987 5679999988743

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.31  E-value=0.46  Score=34.28  Aligned_cols=29  Identities=17%  Similarity=0.044  Sum_probs=26.4

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAG  112 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~  112 (269)
                      |+|.|+ |+.|+.++..|...|.+|.++..
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence            678898 99999999999999999999984

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.15  E-value=0.48  Score=36.15  Aligned_cols=30  Identities=23%  Similarity=0.209  Sum_probs=27.2

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|+ |..|+.++..+...|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            788898 999999999999999999999864

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.79  E-value=1  Score=29.60  Aligned_cols=36  Identities=17%  Similarity=0.200  Sum_probs=28.2

Q ss_pred             CCCCCEEEEecCcchHHHHHHHHH----HHcCCEEEEEeCC
Q 024337           77 AKHGECVFISAASGAVGQLVGQFA----KLLGCYVVGSAGS  113 (269)
Q Consensus        77 ~~~~~~vlI~ga~g~vG~~~i~~a----~~~G~~V~~~~~s  113 (269)
                      +++.++++|.|| |.+|..++..+    +..|.+|+.+.++
T Consensus        34 ~~~~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~   73 (137)
T d1m6ia2          34 SREVKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPE   73 (137)
T ss_dssp             HHHCSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             hhcCCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence            456789999998 99997666555    4569999998865

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=82.43  E-value=7.9  Score=28.90  Aligned_cols=95  Identities=17%  Similarity=0.143  Sum_probs=58.5

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHcCCceeEecCChhh----------------------
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLKNKFGFDEAFNYKEEAD----------------------  137 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~~~~g~~~~~~~~~~~~----------------------  137 (269)
                      .++...+|..|.+++..|+.+|.+.+++..   ++.+.+.++ .+|+.-+.-.....+                      
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~~~~  149 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATK-GYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYDH  149 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHH-HTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSSS
T ss_pred             eeeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHH-HcCCcEEeccCCchHHHHHHHHHHHhcCCEecCCccc
Confidence            456667799999999999999985555442   455667777 888753321111000                      


Q ss_pred             ---------HHHH-HHHHCCCCccEEEeCCCc-h---hHhhhHhhhhcCCEEEEEec
Q 024337          138 ---------LNAA-LKRYFPEGIDVYFENVGG-K---TLDAVLPNMKIRGRIAACGM  180 (269)
Q Consensus       138 ---------~~~~-i~~~~~~~~d~vid~~g~-~---~~~~~~~~l~~~G~~v~~g~  180 (269)
                               ...+ .++.  +.+|.+|-++|+ .   .+...++.+.+..+++.+..
T Consensus       150 ~~~~~g~~t~~~Ei~~q~--~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~~  204 (318)
T d1v71a1         150 PHVLAGQGTAAKELFEEV--GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEP  204 (318)
T ss_dssp             HHHHHHHTHHHHHHHHHH--CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             cccccccchHHHHHHHhc--CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeecccc
Confidence                     1111 1122  357999998885 3   34556666777888877643

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=1.5  Score=30.37  Aligned_cols=37  Identities=16%  Similarity=0.163  Sum_probs=31.1

Q ss_pred             hcCCCCCEEEEec---CcchHHHHHHHHHHHcCCEEEEEe
Q 024337           75 CSAKHGECVFISA---ASGAVGQLVGQFAKLLGCYVVGSA  111 (269)
Q Consensus        75 ~~~~~~~~vlI~g---a~g~vG~~~i~~a~~~G~~V~~~~  111 (269)
                      ..+.+|++|+|.-   +||++-.+++++++..|++|+.+.
T Consensus       113 ~~i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~  152 (178)
T d1zn7a1         113 DALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECV  152 (178)
T ss_dssp             TSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CcccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEE
Confidence            3478899999984   689999999999999999876543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=82.28  E-value=2  Score=29.00  Aligned_cols=39  Identities=13%  Similarity=-0.016  Sum_probs=32.8

Q ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 024337           78 KHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKV  117 (269)
Q Consensus        78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~  117 (269)
                      .+..+|.|.|+ |.+|..++..+...|.  ++..++..+++.
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            45679999997 9999999999999987  888888776643

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.23  E-value=1.4  Score=29.44  Aligned_cols=37  Identities=14%  Similarity=0.091  Sum_probs=29.8

Q ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 024337           79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK  116 (269)
Q Consensus        79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~  116 (269)
                      |..+|.|.|+ |.+|...+.++...+. ++..++..+++
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            4578999997 9999988888888777 88888866543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=82.22  E-value=1  Score=35.09  Aligned_cols=32  Identities=16%  Similarity=0.129  Sum_probs=26.6

Q ss_pred             CCEEEEecCcchHHHHHHH-HHHHcCCEEEEEe
Q 024337           80 GECVFISAASGAVGQLVGQ-FAKLLGCYVVGSA  111 (269)
Q Consensus        80 ~~~vlI~ga~g~vG~~~i~-~a~~~G~~V~~~~  111 (269)
                      ..+|||+||+|=+|...+. |++..|.+|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            4589999999999977765 5567899999986

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=82.15  E-value=0.63  Score=35.56  Aligned_cols=30  Identities=10%  Similarity=0.031  Sum_probs=26.9

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      |+|.|+ |..|+.++.-|...|++|+++...
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence            788898 999999999999999999999854

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.12  E-value=1.6  Score=30.44  Aligned_cols=38  Identities=24%  Similarity=0.217  Sum_probs=32.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK  121 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~  121 (269)
                      +|.|.|. |=+|+..+.++. .|.+|++++.++++.+.++
T Consensus         2 kI~ViGl-G~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAGS-GYVGLSLGVLLS-LQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSCHHHHHHHH
T ss_pred             EEEEECC-ChhHHHHHHHHH-CCCcEEEEECCHHHHHHHh
Confidence            6888987 999998887664 6999999999999888775

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.06  E-value=1.8  Score=28.78  Aligned_cols=33  Identities=24%  Similarity=0.095  Sum_probs=28.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCH
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSK  114 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~  114 (269)
                      +|.|.||+|.+|..++.++...+.  ++..++..+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            589999889999999999998885  888887553

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.02  E-value=0.59  Score=31.61  Aligned_cols=41  Identities=17%  Similarity=0.102  Sum_probs=32.9

Q ss_pred             hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEE
Q 024337           65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVV  108 (269)
Q Consensus        65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~  108 (269)
                      .+++..|.  .....+++|+|.|| |.+|.-++..+..+|+++.
T Consensus        16 ~~a~d~L~--~~~~~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~   56 (162)
T d1ps9a2          16 LSYLDVLR--DKAPVGNKVAIIGC-GGIGFDTAMYLSQPGESTS   56 (162)
T ss_dssp             EEHHHHHT--SCCCCCSEEEEECC-HHHHHHHHHHHTCCSSCGG
T ss_pred             EEHHHHhh--CccccCCceEEEcC-chhHHHHHHHHHHcCCccc
Confidence            45555552  45678999999999 9999999999999998544

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.94  E-value=5.1  Score=26.36  Aligned_cols=69  Identities=20%  Similarity=0.208  Sum_probs=40.4

Q ss_pred             EEEEecCcchHHHHHHHHHH-HcC--CEEEEEeCCHHHHHHHHHHc-CCc-----eeEecCChhhHHHHHHHHCCCCccE
Q 024337           82 CVFISAASGAVGQLVGQFAK-LLG--CYVVGSAGSKDKVDLLKNKF-GFD-----EAFNYKEEADLNAALKRYFPEGIDV  152 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~-~~G--~~V~~~~~s~~~~~~~~~~~-g~~-----~~~~~~~~~~~~~~i~~~~~~~~d~  152 (269)
                      +|.|.|++|.+|..++.+++ ..+  .++..++..+.....+. .+ .+.     ..+...+  ++ +.++     +.|+
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~-Dl~h~~~~~~~~~~~~~~--~~-~~~~-----~aDv   72 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV-DLSHIPTAVKIKGFSGED--AT-PALE-----GADV   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHH-HHHTSCSSCEEEEECSSC--CH-HHHT-----TCSE
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHH-HHHCCccccCCcEEEcCC--Cc-cccC-----CCCE
Confidence            68899988999988877654 334  37888775443333333 22 211     1222121  22 2333     4899


Q ss_pred             EEeCCCc
Q 024337          153 YFENVGG  159 (269)
Q Consensus       153 vid~~g~  159 (269)
                      |+-|.|.
T Consensus        73 vvitaG~   79 (145)
T d2cmda1          73 VLISAGV   79 (145)
T ss_dssp             EEECCSC
T ss_pred             EEECCCc
Confidence            9999984

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=81.82  E-value=1.4  Score=30.54  Aligned_cols=75  Identities=19%  Similarity=0.041  Sum_probs=43.0

Q ss_pred             CCCEEE-EecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HcCCce-eEecCChhhHHHHHHHHCCC-Ccc
Q 024337           79 HGECVF-ISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEADLNAALKRYFPE-GID  151 (269)
Q Consensus        79 ~~~~vl-I~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~---~~g~~~-~~~~~~~~~~~~~i~~~~~~-~~d  151 (269)
                      .+.++| +..|||.+|+.++    ..|+ +|+.++.+.+..+.+++   .++... ....... +..+.++..... +||
T Consensus        43 ~~~~vLDlFaGsG~~glEal----SRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~~-d~~~~l~~~~~~~~fD  117 (183)
T d2ifta1          43 HQSECLDGFAGSGSLGFEAL----SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQ-SSLDFLKQPQNQPHFD  117 (183)
T ss_dssp             TTCEEEETTCTTCHHHHHHH----HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECS-CHHHHTTSCCSSCCEE
T ss_pred             ccceEeecccCccceeeeee----eecceeeEEeecccchhhhHhhHHhhhcccccccccccc-cccccccccccCCccc
Confidence            344454 4566777777655    4588 99999999988776664   344421 1111111 334444433333 799


Q ss_pred             EEEeCCC
Q 024337          152 VYFENVG  158 (269)
Q Consensus       152 ~vid~~g  158 (269)
                      +||---+
T Consensus       118 lIFlDPP  124 (183)
T d2ifta1         118 VVFLDPP  124 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEechh
Confidence            8875433

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=81.74  E-value=1.7  Score=28.85  Aligned_cols=36  Identities=25%  Similarity=0.126  Sum_probs=29.4

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKV  117 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~  117 (269)
                      ++|.|.|+ |.+|..++..+...|.  +++.++..+++.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            57889997 9999998888877775  888888777653

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.66  E-value=0.56  Score=33.72  Aligned_cols=34  Identities=9%  Similarity=-0.143  Sum_probs=28.2

Q ss_pred             CEEEEecCcchHHHHHHHHHHHcC-------CEEEEEeCCHH
Q 024337           81 ECVFISAASGAVGQLVGQFAKLLG-------CYVVGSAGSKD  115 (269)
Q Consensus        81 ~~vlI~ga~g~vG~~~i~~a~~~G-------~~V~~~~~s~~  115 (269)
                      -+|+|.|+ |+.|++++..+...|       .+|.+..+.+.
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            47999998 999999999887776       57888886644

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=80.90  E-value=3.6  Score=28.09  Aligned_cols=93  Identities=17%  Similarity=0.147  Sum_probs=53.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHc-C--CEEEEEeCCH--HHHHHHHHHcCC-----c-ee---------Ee--------cC
Q 024337           82 CVFISAASGAVGQLVGQFAKLL-G--CYVVGSAGSK--DKVDLLKNKFGF-----D-EA---------FN--------YK  133 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~-G--~~V~~~~~s~--~~~~~~~~~~g~-----~-~~---------~~--------~~  133 (269)
                      +|.|.|- |-+|.++.+.+... .  .+|+++....  +....+. ++.-     + .+         +|        .+
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLl-kyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~   79 (172)
T d1rm4a1           2 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLL-KYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR   79 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHH-HCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHH-hcCcccccccceeEecCCcceEECCEEEEEecCC
Confidence            5889998 99999998876543 2  4777766432  2333333 2211     0 00         11        11


Q ss_pred             ChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccc
Q 024337          134 EEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMIS  182 (269)
Q Consensus       134 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  182 (269)
                      ++    ..+.+  .+ ++|+|+||+|. .....+...|..+-+-|.+..+.
T Consensus        80 ~p----~~i~W--~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~  124 (172)
T d1rm4a1          80 NP----VNLPW--GDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG  124 (172)
T ss_dssp             CG----GGSCH--HHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred             Ch----HHCCh--hhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence            11    01110  12 69999999996 66777777888876555555543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.72  E-value=0.87  Score=34.14  Aligned_cols=31  Identities=19%  Similarity=0.140  Sum_probs=26.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC
Q 024337           82 CVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS  113 (269)
Q Consensus        82 ~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s  113 (269)
                      .|+|.|| |.+|++++..+...|. +|.+++++
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            4889998 9999999988888897 69888765

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=80.69  E-value=1.5  Score=31.46  Aligned_cols=67  Identities=15%  Similarity=0.180  Sum_probs=40.8

Q ss_pred             cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337           87 AASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG  159 (269)
Q Consensus        87 ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  159 (269)
                      -.||-+|.+.++.|..+|++|+.+..... ..    .-....++......+....+.+..+ ..|++|.++--
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~-~~----~p~~~~~~~~~t~~~m~~~~~~~~~-~~D~~i~aAAv   95 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVS-LP----TPPFVKRVDVMTALEMEAAVNASVQ-QQNIFIGCAAV   95 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC----CCTTEEEEECCSHHHHHHHHHHHGG-GCSEEEECCBC
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccc-cC----cccccccceehhhHHHHHHHHhhhc-cceeEeeeech
Confidence            36789999999999999999999884321 10    0011123444332245555544432 47888876654

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=80.30  E-value=1  Score=33.02  Aligned_cols=30  Identities=17%  Similarity=0.099  Sum_probs=26.9

Q ss_pred             EEEecCcchHHHHHHHHHHHcCCEEEEEeCC
Q 024337           83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS  113 (269)
Q Consensus        83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s  113 (269)
                      ++|.|+ |+.|+.++..|...|.+|.++.+.
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence            578898 999999999999999999999854