Citrus Sinensis ID: 024375
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 268 | ||||||
| 358249046 | 268 | uncharacterized protein LOC100810003 [Gl | 1.0 | 1.0 | 0.783 | 1e-122 | |
| 224127704 | 268 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.802 | 1e-120 | |
| 255541628 | 268 | conserved hypothetical protein [Ricinus | 1.0 | 1.0 | 0.805 | 1e-120 | |
| 449441454 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 1.0 | 0.809 | 1e-118 | |
| 357507383 | 268 | hypothetical protein MTR_7g077870 [Medic | 1.0 | 1.0 | 0.772 | 1e-117 | |
| 388500274 | 268 | unknown [Lotus japonicus] | 1.0 | 1.0 | 0.776 | 1e-116 | |
| 297824659 | 268 | hypothetical protein ARALYDRAFT_904052 [ | 1.0 | 1.0 | 0.768 | 1e-115 | |
| 356568400 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 1.0 | 0.772 | 1e-113 | |
| 388522265 | 270 | unknown [Lotus japonicus] | 1.0 | 0.992 | 0.783 | 1e-113 | |
| 225454274 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 1.0 | 0.783 | 1e-113 |
| >gi|358249046|ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max] gi|255647823|gb|ACU24371.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/268 (78%), Positives = 239/268 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGVDS E+WI+DQMHT+RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVDSTTENWIIDQMHTVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ +LLVRLLLE R P++RKSSVAEGLTVEGILENW K+KP+IMEEW E R+ LI+L G
Sbjct: 61 GYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDEKRDDLIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEW++ DF TWIGANRLYPGVSDALK ASSR+YIVT+ QSRF + LLRELAGVTI P
Sbjct: 121 KVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTKQSRFADALLRELAGVTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLGTGPKV VLKQLQKKPEHQGL LHFVEDRLATLKNVIKEPELD WNLYL +WGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KER EAA++PRI +L+LS+F KLK
Sbjct: 241 NTQKEREEAAAIPRIHVLELSNFSKKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127704|ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/268 (80%), Positives = 240/268 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFD VDS L+DWIVDQMH +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPVLFDTVDSTLQDWIVDQMHIVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMR+PS+RKSSVAEGLTV+GIL+NW KIKPVIMEEW+ENR+ALIEL G
Sbjct: 61 GYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAENRDALIELFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEWMD D TWIGANR YPGV DALK ASS IYIVT+ QSRF + LL+ELAG+ I P
Sbjct: 121 KVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTKQSRFADALLQELAGLKIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLGTGPKV VLKQLQ+KPEHQGL+LHFVEDRLATLKNVIK+PELDGWNLYL DWGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQRKPEHQGLKLHFVEDRLATLKNVIKDPELDGWNLYLGDWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT +ER EAAS+PRI LLQL+DF KLK
Sbjct: 241 NTHQERGEAASIPRITLLQLTDFSKKLK 268
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541628|ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis] gi|223549058|gb|EEF50547.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/268 (80%), Positives = 240/268 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFDGVDSALE+WIVDQM +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSALEEWIVDQMFIVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMR+PS+RKSSVAEGLTVEGILENW K+KPVIMEEW E+R++LI L G
Sbjct: 61 GYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGEDRDSLIHLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
K+RDEWMD D TWI ANR YPGV DALK ASSRIYIVT+ QSRF + LLRELAG+TI P
Sbjct: 121 KIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTKQSRFADALLRELAGLTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+++YGLGTGPKV VLKQLQ+KPE+QGL LHFVEDRLATLKNVIKEPELDGWNLYL DWGY
Sbjct: 181 EKIYGLGTGPKVKVLKQLQEKPEYQGLTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KER EAAS+PRI+LLQLSDF KLK
Sbjct: 241 NTQKEREEAASIPRIRLLQLSDFSKKLK 268
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441454|ref|XP_004138497.1| PREDICTED: uncharacterized protein LOC101221288 [Cucumis sativus] gi|449529778|ref|XP_004171875.1| PREDICTED: uncharacterized LOC101221288 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/268 (80%), Positives = 241/268 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LFD V+S+LE+WIVDQM+T+RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDEVESSLENWIVDQMYTVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMRLPS+RKSSVAEGLTV GILENW K+KPVIMEEW ENR+ALI+L G
Sbjct: 61 GYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSKLKPVIMEEWGENRDALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W+D D TWIGANR YPGVSDALK ASSRIYIVT+ Q RF + LLRELAGVTI P
Sbjct: 121 KVRDQWIDEDLATWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALLRELAGVTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLGTGPKV VLK LQK PEHQGL+LHFVEDRLATLKNVIKE ELDGWN+YLVDWGY
Sbjct: 181 ERIYGLGTGPKVEVLKMLQKMPEHQGLKLHFVEDRLATLKNVIKESELDGWNIYLVDWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KER EAA++ RIQLLQLSDF TKLK
Sbjct: 241 NTQKEREEAAAIKRIQLLQLSDFSTKLK 268
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507383|ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|217073782|gb|ACJ85251.1| unknown [Medicago truncatula] gi|355498995|gb|AES80198.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|388518891|gb|AFK47507.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/268 (77%), Positives = 239/268 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGVDS +EDWIVDQMHT+RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPVLFDGVDSTIEDWIVDQMHTVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLE R PS+RKSSVAEGL VEGILE+W +KP+IMEEW ENREALI+L G
Sbjct: 61 GYENLLLVRLLLETRTPSIRKSSVAEGLAVEGILESWSTLKPIIMEEWGENREALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEW++ DF WIGANR+YPGVSDALK ASS+++IVT+ QSRF + LLRELAGVTI
Sbjct: 121 KVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALLRELAGVTIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLGTGPKV +LKQLQK+PEHQGL LHFVEDRLATLKNVIKEPELD WNLYL +WGY
Sbjct: 181 ERIYGLGTGPKVEILKQLQKRPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGNWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT +E+ EAA++PRI++LQLSDF KLK
Sbjct: 241 NTAQEKEEAAAIPRIRVLQLSDFSKKLK 268
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500274|gb|AFK38203.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/268 (77%), Positives = 239/268 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M +LYALDFDGVICDSC E++LSA+KAA+VRWP LFDGV+SA +DWIVDQMH +RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLE R PS+RKSSVAEGLTV+GILE W K+KPVIMEEW ENR+ALI+L G
Sbjct: 61 GYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEW++ +F TWIGANR+YPGVSDALK ASSR+YIVT+ QSRF + +LRELAGVTI P
Sbjct: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELAGVTIPP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLG+GPKV VLKQLQKKPEHQG LHFVEDRLATLKNVIKEPELD WNLYL +WGY
Sbjct: 181 ERIYGLGSGPKVEVLKQLQKKPEHQGPTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KE+ EAA++ RIQ+L+LSDF KLK
Sbjct: 241 NTRKEKEEAAAISRIQVLELSDFSKKLK 268
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297824659|ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/268 (76%), Positives = 237/268 (88%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LF+GVDSALE+WIVDQMH +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLE R+PS+RKSSVAEGLTV+GILE+W KIKPVIME W E+++ALI+L G
Sbjct: 61 GYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDEDKDALIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LLRE+AGV I
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLG+GPKV VLK +Q KPEHQGL LHFVEDRLATLKNVIKEPELD WNLYL +WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLIQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGNWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KERAEAAS+PRIQ+++LS F KLK
Sbjct: 241 NTEKERAEAASIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568400|ref|XP_003552399.1| PREDICTED: uncharacterized protein LOC100809469 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/268 (77%), Positives = 239/268 (89%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M LYALDFDGVICDSC ETA+SA+KAA++RWP LFDGVDS +EDWIVDQM T+RPVVET
Sbjct: 1 MGHLYALDFDGVICDSCGETAISALKAAKLRWPPLFDGVDSTIEDWIVDQMITVRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+TLLLVRLLLE R+PS+RKSSV+EGL VE ILENW K+KP+IMEEW+ENRE LI+L G
Sbjct: 61 GYETLLLVRLLLETRVPSIRKSSVSEGLKVEDILENWFKLKPIIMEEWNENREELIDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ DFT WIGANRLYPG +DAL+ ASS++YIVT+ QSRF + LLRELAGVTI P
Sbjct: 121 KVRDDWLERDFTGWIGANRLYPGTADALRFASSKVYIVTTKQSRFADALLRELAGVTIAP 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+RLYGLGTGPKV VLK+LQK PEHQGL LHFVEDRLATLKNVIKEPELD WNLYLV+WG+
Sbjct: 181 ERLYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDNWNLYLVNWGF 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KER EA + PRIQ+++LSDF +KLK
Sbjct: 241 NTQKEREEAQANPRIQVIELSDFSSKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388522265|gb|AFK49194.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/268 (78%), Positives = 237/268 (88%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M LYA DFDGVICDSC ETA+SA+KAA++RWPSLF VDSA EDWIV+QM T+RPVVET
Sbjct: 3 MGHLYASDFDGVICDSCGETAISALKAAKLRWPSLFGSVDSATEDWIVEQMITVRPVVET 62
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+TLLLVRLLLE R+PS+RKSSVA+GLTVE ILENWLK+KPVIMEEW+ENRE LIEL G
Sbjct: 63 GYETLLLVRLLLETRVPSIRKSSVADGLTVEDILENWLKLKPVIMEEWNENREDLIELFG 122
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ DF WIGANRLYPG +DAL+ ASSR+YIVT+ Q RF + LLRELAGVT+ P
Sbjct: 123 KVRDDWLEKDFNGWIGANRLYPGTADALRFASSRVYIVTTKQGRFADALLRELAGVTLPP 182
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLGTGPKV VLK+LQK PEHQGL LHFVEDRLATLKNVIKEPELDGWNLYLVDWG+
Sbjct: 183 ERIYGLGTGPKVEVLKKLQKMPEHQGLTLHFVEDRLATLKNVIKEPELDGWNLYLVDWGF 242
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KER EAA+ PRIQ+L LSDF KLK
Sbjct: 243 NTQKEREEAAANPRIQVLGLSDFSNKLK 270
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454274|ref|XP_002275801.1| PREDICTED: uncharacterized protein LOC100260183 [Vitis vinifera] gi|297745313|emb|CBI40393.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/268 (78%), Positives = 232/268 (86%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDG++CDSC E++LSAVKAA+VRWP LFDGVDS LEDWIVDQM +RPVVET
Sbjct: 1 MGDLYALDFDGILCDSCGESSLSAVKAAKVRWPGLFDGVDSKLEDWIVDQMFIIRPVVET 60
Query: 61 GYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ LLLVRLLLEMRLPS+RKSSV EGLT+EGILENW K+KPVIMEEW E RE L++L G
Sbjct: 61 GYENLLLVRLLLEMRLPSIRKSSVVEGLTIEGILENWSKLKPVIMEEWDEKREPLVDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRDEWM+ D TWI ANR YPGV+DALK ASS++YIVT+ Q RF E LLRELAGVTI
Sbjct: 121 KVRDEWMEDDLATWIDANRFYPGVADALKFASSKVYIVTTKQGRFAEALLRELAGVTIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLGTGPKV VLKQLQK+ EHQGL LHFVEDRLATLKNVIKEPELDGWNLYL WGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKQSEHQGLTLHFVEDRLATLKNVIKEPELDGWNLYLGKWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KER EAA + RIQLL+LSDF KLK
Sbjct: 241 NTQKEREEAAGISRIQLLELSDFSKKLK 268
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 268 | ||||||
| TAIR|locus:2050730 | 268 | AT2G45990 "AT2G45990" [Arabido | 1.0 | 1.0 | 0.712 | 4.2e-102 |
| TAIR|locus:2050730 AT2G45990 "AT2G45990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
Identities = 191/268 (71%), Positives = 219/268 (81%)
Query: 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVET 60
M DLYALDFDGV+CDSC E++LSAVKAA+VRWP LF+GVDSALE+WIVDQMH +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYDTXXXXXXXXXXXXXXXXKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSG 120
GY+ KSSVAEGLTV+GILE+W K KPVIME W E+R+AL++L G
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITP 180
KVRD+W++ D TTWIGANR YPGVSDALK ASS+IYIVT+ Q RF E LLRE+AGV I
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240
+R+YGLG+GPKV VLK LQ KPEHQGL LHFVEDRLATLKNVIKEPELD W+LYL WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGTWGY 240
Query: 241 NTPKERAEAASMPRIQLLQLSDFCTKLK 268
NT KERAEAA +PRIQ+++LS F KLK
Sbjct: 241 NTEKERAEAAGIPRIQVIELSTFSNKLK 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 252 0.00082 114 3 11 22 0.47 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 621 (66 KB)
Total size of DFA: 209 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.57u 0.11s 20.68t Elapsed: 00:00:00
Total cpu time: 20.57u 0.11s 20.68t Elapsed: 00:00:00
Start: Fri May 10 03:38:24 2013 End: Fri May 10 03:38:24 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XIV1313 | hypothetical protein (269 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.00150423 | SubName- Full=Putative uncharacterized protein; (206 aa) | • | • | 0.529 | |||||||
| gw1.XIII.355.1 | hypothetical protein (158 aa) | • | • | 0.514 | |||||||
| eugene3.00130190 | SubName- Full=Putative uncharacterized protein; (339 aa) | • | • | 0.502 | |||||||
| gw1.I.8641.1 | annotation not avaliable (113 aa) | • | 0.501 | ||||||||
| grail3.0089000701 | hypothetical protein (311 aa) | • | 0.501 | ||||||||
| eugene3.00061626 | hypothetical protein (259 aa) | • | 0.500 | ||||||||
| estExt_Genewise1_v1.C_LG_II4195 | SubName- Full=Putative uncharacterized protein; (140 aa) | • | 0.500 | ||||||||
| gw1.XII.99.1 | hypothetical protein (203 aa) | • | 0.498 | ||||||||
| gw1.2719.1.1 | annotation not avaliable (154 aa) | • | 0.498 | ||||||||
| gw1.1884.1.1 | annotation not avaliable (196 aa) | • | 0.498 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 268 | |||
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 100.0 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 100.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 100.0 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 100.0 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.98 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.97 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.97 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PLN02940 | 382 | riboflavin kinase | 99.96 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.96 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.96 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.96 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.96 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.96 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.95 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.95 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.95 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.95 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.94 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.93 | |
| PLN02811 | 220 | hydrolase | 99.93 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.93 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.93 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.93 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.92 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.91 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.91 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.9 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.89 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.89 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.88 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.88 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.87 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.86 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.84 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.84 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.84 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.84 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.84 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.82 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.82 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.81 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.8 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.8 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.8 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.79 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.77 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.73 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.72 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.72 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.69 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.68 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.68 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.67 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.66 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.66 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.66 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.64 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.64 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.61 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.61 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.59 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.56 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.56 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.54 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.53 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.53 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.53 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.52 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.49 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.46 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.43 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.4 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.4 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.39 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.37 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.35 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.35 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.32 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.31 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.26 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.25 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.25 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.24 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.23 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.1 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.1 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.09 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.08 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.07 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.02 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.0 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.96 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.96 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.95 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.89 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.86 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.78 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.78 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.75 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.67 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.61 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 98.57 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.52 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.52 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.49 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.47 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.46 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.42 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.42 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.31 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.31 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.27 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.27 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.26 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.23 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.21 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.21 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.21 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.2 | |
| PLN02887 | 580 | hydrolase family protein | 98.11 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.06 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.03 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 97.96 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.95 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 97.95 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.93 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 97.84 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.74 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.69 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.68 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 97.63 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.57 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.54 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.5 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 97.5 | |
| PLN02423 | 245 | phosphomannomutase | 97.31 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.3 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.21 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.14 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.1 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.1 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.09 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.03 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.02 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.99 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.89 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.81 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 96.66 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.6 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.14 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.07 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.04 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.95 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 95.95 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.93 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 95.92 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.91 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.82 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 95.58 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.44 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 95.04 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 95.01 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 94.91 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 94.9 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.73 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 94.64 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 94.63 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 94.37 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 94.31 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 94.3 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.13 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.79 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 93.72 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 93.53 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 93.34 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 93.06 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 92.7 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 92.56 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 92.54 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 92.48 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 92.42 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 92.34 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 91.96 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 91.96 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 91.93 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 91.73 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 91.61 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 91.6 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 91.16 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 91.08 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 90.56 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 90.55 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 90.54 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 90.44 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 89.76 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 89.71 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 88.47 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 88.32 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 88.25 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 87.91 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 87.87 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 86.79 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 86.53 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 86.53 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 86.34 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 85.9 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 85.65 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 85.51 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 85.43 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 85.09 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 83.1 | |
| PLN03017 | 366 | trehalose-phosphatase | 82.66 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 82.47 | |
| PLN02151 | 354 | trehalose-phosphatase | 82.01 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 81.93 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 81.4 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 81.36 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 81.1 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 80.74 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 80.62 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 80.38 |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=281.93 Aligned_cols=208 Identities=27% Similarity=0.338 Sum_probs=169.6
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..++++++++++ ++.. ..+.++.+||.|....+ .+.+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~ig~~~~~~~-~~~~~~~------ 62 (220)
T COG0546 3 MIKAILFDLDGTLVDSAEDILRAFNAALAELG------LPPL-------DEEEIRQLIGLGLDELI-ERLLGEA------ 62 (220)
T ss_pred CCCEEEEeCCCccccChHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhcCCHHHHH-HHHhccc------
Confidence 36899999999999999999999999999994 3321 13578999999988766 2433210
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.. +...+.++.++++|.+.|.+.. .+.+||||.++|+ ++|++++|
T Consensus 63 --------~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i 110 (220)
T COG0546 63 --------DE----------------------EAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGI 110 (220)
T ss_pred --------cc----------------------hhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEE
Confidence 00 0001334556666666555544 4689999999999 89999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+|||++..++.+|++ +|+..||+.++|.+ .||+|+++..++++++.+|++++|||||.+||++|++ ||+++
T Consensus 111 ~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~----Ag~~~ 185 (220)
T COG0546 111 VTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKA----AGVPA 185 (220)
T ss_pred EeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHH----cCCCE
Confidence 999999999999996 99999999999944 3599999999999999998899999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++|+|||++.+.+... .|++++.++.+|...|
T Consensus 186 v~v~~g~~~~~~l~~~--~~d~vi~~~~el~~~l 217 (220)
T COG0546 186 VGVTWGYNSREELAQA--GADVVIDSLAELLALL 217 (220)
T ss_pred EEEECCCCCCcchhhc--CCCEEECCHHHHHHHH
Confidence 9999999766666654 6889999999997765
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=260.11 Aligned_cols=206 Identities=18% Similarity=0.156 Sum_probs=162.8
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|||||||||+||.+.+..+++.++++++ ++.. ..++++..+|.+.+..+. ..+..
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~~-~~~~~------- 69 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARG------RAPI-------TLAQLRPVVSKGARAMLA-VAFPE------- 69 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCC------CCCC-------CHHHHHHHhhhHHHHHHH-HHhcc-------
Confidence 67999999999999999999999999999994 3211 124567777877665431 11100
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
++.+..++....+++.|.+.+ .....+|||+.++|+ ++|++++|
T Consensus 70 -----------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~g~~l~i 116 (229)
T PRK13226 70 -----------------------------LDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECAGCVWGI 116 (229)
T ss_pred -----------------------------CChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHCCCeEEE
Confidence 112222334445555554432 234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||++...+..+|++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 117 ~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~----aG~~~ 191 (229)
T PRK13226 117 VTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA----AGMPS 191 (229)
T ss_pred ECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH----CCCcE
Confidence 999999999999996 99999999999865 2599999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCH-HHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTP-KERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~-~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||++.. +++.. ..|++++.++++|+++|
T Consensus 192 i~v~~g~~~~~~~~~~--~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 192 VAALWGYRLHDDDPLA--WQADVLVEQPQLLWNPA 224 (229)
T ss_pred EEEeecCCCCCcChhh--cCCCeeeCCHHHHHHHh
Confidence 9999999743 33433 46899999999999887
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=247.51 Aligned_cols=202 Identities=16% Similarity=0.141 Sum_probs=157.4
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+++.++++++.. ..+ .++++.++|......+
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~------~~~-------~~~~~~~~G~~~~~~~-------------- 54 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPN------QYK-------REDVLPFIGPSLHDTF-------------- 54 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCC------CCC-------HHHHHHHhCcCHHHHH--------------
Confidence 3689999999999999999999999999998411 111 1234445554322211
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.. +.++..++....|+..+... ......+|||+.++|+ ++|++++|
T Consensus 55 --------------~~-------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~g~~~~i 103 (214)
T PRK13288 55 --------------SK-------------IDESKVEEMITTYREFNHEH----HDELVTEYETVYETLKTLKKQGYKLGI 103 (214)
T ss_pred --------------Hh-------------cCHHHHHHHHHHHHHHHHHh----hhhhcccCcCHHHHHHHHHHCCCeEEE
Confidence 00 01222233334445444322 2334689999999999 68999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||+++..+..+|+. +|+..||+.|+|++ .||+|+++.+++++++++|++++|||||.+|+++|++ +|+++
T Consensus 104 ~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~----aG~~~ 178 (214)
T PRK13288 104 VTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKN----AGTKT 178 (214)
T ss_pred EeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999975 2599999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||++..+++... .|++++.++.+|...+
T Consensus 179 i~v~~g~~~~~~l~~~--~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 179 AGVAWTIKGREYLEQY--KPDFMLDKMSDLLAIV 210 (214)
T ss_pred EEEcCCCCCHHHHhhc--CcCEEECCHHHHHHHH
Confidence 9999999888777654 5889999999997754
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=243.29 Aligned_cols=206 Identities=18% Similarity=0.234 Sum_probs=158.1
Q ss_pred EEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccccc
Q 024375 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~~ 84 (268)
|+|||||||+||.+.+..+++.++++++ .+.. +.++++.++|.+....+ ...+...
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~g~~~~~~~-~~~~~~~---------- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALG------LPPA-------TLARVIGFIGNGVPVLM-ERVLAWA---------- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCC------CCCC-------CHHHHHHHhcccHHHHH-HHHhhcc----------
Confidence 6999999999999999999999999884 3211 12345556676654332 1222100
Q ss_pred ccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCC
Q 024375 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK 161 (268)
+. ..+.+..++....+.+.|.+. ......+|||+.++|+ ++|++++|+||+
T Consensus 57 --~~--------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~ 110 (213)
T TIGR01449 57 --GQ--------------------EPDAQRVAELRKLFDRHYEEV----AGELTSVFPGVEATLGALRAKGLRLGLVTNK 110 (213)
T ss_pred --cc--------------------ccChHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 00 012222333344445444433 2334689999999999 789999999999
Q ss_pred chHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+...++.+|++ +|+..+|+.++|++ .||+|+++..++++++++|++|+|||||.+|+++|++ +|+++|+|.
T Consensus 111 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~----aG~~~i~v~ 185 (213)
T TIGR01449 111 PTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA----AGCPSVLLT 185 (213)
T ss_pred CHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH----CCCeEEEEc
Confidence 99999999996 99999999999875 3599999999999999999999999999999999998 899999999
Q ss_pred cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 238 WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 238 wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+++.+++... .|++++.++.+|.+.|
T Consensus 186 ~g~~~~~~l~~~--~a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 186 YGYRYGEAIDLL--PPDVLYDSLNELPPLL 213 (213)
T ss_pred cCCCCCcchhhc--CCCeEeCCHHHHHhhC
Confidence 999877666654 5789999999998754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=245.47 Aligned_cols=215 Identities=11% Similarity=0.028 Sum_probs=159.8
Q ss_pred cEEEEecCcccccChh-HHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~-~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|+|||||||+||.. .+..+++.++++++ ++. . .++++..+|.+....+. ..+ .
T Consensus 3 k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g------~~~-~-------~~~~~~~~G~~~~~~~~-~~~-~-------- 58 (253)
T TIGR01422 3 EAVIFDWAGTTVDFGSFAPTQAFVEAFAEFG------VQI-T-------LEEARGPMGLGKWDHIR-ALL-K-------- 58 (253)
T ss_pred eEEEEeCCCCeecCCCccHHHHHHHHHHHcC------CCc-c-------HHHHHHhcCccHHHHHH-HHh-c--------
Confidence 7899999999999965 35778899998883 321 1 13455666766544331 111 0
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
..+.. +.+.+.+| .+.+++++....|++.|.+. ......+|||+.++|+ ++|++++
T Consensus 59 --------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~e~L~~L~~~g~~l~ 119 (253)
T TIGR01422 59 --------MPAVA-------ERWRAKFGRLPTEADIEAIYEAFEPLQLAK----LAEYSSPIPGVIEVIAYLRARGIKIG 119 (253)
T ss_pred --------CHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HHhcCccCCCHHHHHHHHHHCCCeEE
Confidence 00111 11222333 24455555566666655433 2345789999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCC-ceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccCC
Q 024375 157 IVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f-~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
|+||++...++.+|++ +|+..+| +.|+|++ .||+|+++..+++++++. |++|+|||||.+|+++|++ ||
T Consensus 120 IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~----aG 194 (253)
T TIGR01422 120 STTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRN----AG 194 (253)
T ss_pred EECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHH----CC
Confidence 9999999999999996 9999985 8999876 359999999999999995 9999999999999999998 89
Q ss_pred CcEEEEecCCCC-----------------------HHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~i~v~wGy~~-----------------------~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++|+|.||++. .+++.. ..|++++.++++|...|
T Consensus 195 i~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 195 MWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKA--AGAHYVIDTLAELPAVI 252 (253)
T ss_pred CeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHh--cCCCEehhcHHHHHHhh
Confidence 999999999973 345654 46889999999997765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=238.60 Aligned_cols=207 Identities=15% Similarity=0.092 Sum_probs=161.0
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccc-cccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRP-VVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~-~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.++|+|||||||+||.+.+..+.+.++++++ ++... ++.+. ++|.+....+ .+.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~~--------~~~~~~~~g~~~~~~~-~~~~--------- 56 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAG------LSPTP--------EEVQSAWMGQSKIEAI-RALL--------- 56 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcC------CCCCH--------HHHHHhhcCCCHHHHH-HHHH---------
Confidence 3789999999999999999999999999883 33111 12223 5665544432 1221
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+.+|.+.+..++....|++.|.+.+.. ...++|||+.++|+ ++|++++|
T Consensus 57 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g~~~~i 108 (220)
T TIGR03351 57 -------------------------ALDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSGIKVAL 108 (220)
T ss_pred -------------------------hccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCCCEEEE
Confidence 112233334444455555555443321 23589999999999 68999999
Q ss_pred EcCCchHHHHHHHHHhcCCC--CCCceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccCC
Q 024375 158 VTSNQSRFVETLLRELAGVT--ITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~--~~f~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
+||+....+..+|++ +|+. .+|+.+++++ .||+|+++..+++++++. |++|+||||+..|+++|++ +|
T Consensus 109 vT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~----aG 183 (220)
T TIGR03351 109 TTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGIN----AG 183 (220)
T ss_pred EeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHH----CC
Confidence 999999999999996 9998 9999999875 259999999999999997 7999999999999999998 89
Q ss_pred CcE-EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~-i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++ |+|.||+.+.+++... .|++++.++.+|...|
T Consensus 184 ~~~~i~~~~g~~~~~~~~~~--~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 184 AGAVVGVLTGAHDAEELSRH--PHTHVLDSVADLPALL 219 (220)
T ss_pred CCeEEEEecCCCcHHHHhhc--CCceeecCHHHHHHhh
Confidence 999 9999999888777654 6889999999998765
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=245.43 Aligned_cols=203 Identities=12% Similarity=0.072 Sum_probs=151.3
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.++++++-. .|.+.. . ....+.++|.+.+..+ .+.+..
T Consensus 22 ~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~--~g~~~~-~------~~~~~~~~G~~~~~~~-~~~~~~-------- 83 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN--GGVPIT-E------EFFVENIAGKHNEDIA-LGLFPD-------- 83 (248)
T ss_pred cCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc--cCCCCC-H------HHHHHHcCCCCHHHHH-HHHcCc--------
Confidence 479999999999999999999999999998311 012211 0 1124456676554433 121100
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
.. +...+....++..|.... .....+|||+.++|+ ++|++++|+
T Consensus 84 -------~~----------------------~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~g~~l~I~ 130 (248)
T PLN02770 84 -------DL----------------------ERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDRGLKRAAV 130 (248)
T ss_pred -------ch----------------------hhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHcCCeEEEE
Confidence 00 000111122333333321 234689999999999 789999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+++..++..|++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|
T Consensus 131 Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~----aGi~~i 205 (248)
T PLN02770 131 TNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA----AGMPVV 205 (248)
T ss_pred eCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH----CCCEEE
Confidence 99999999999996 99999999999876 2599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|.||+ ..+++.. ..|++++.+++++
T Consensus 206 ~v~~g~-~~~~l~~--~~a~~vi~~~~e~ 231 (248)
T PLN02770 206 GLTTRN-PESLLME--AKPTFLIKDYEDP 231 (248)
T ss_pred EEeCCC-CHHHHhh--cCCCEEeccchhh
Confidence 999996 4555554 4688999999984
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=246.97 Aligned_cols=202 Identities=22% Similarity=0.212 Sum_probs=157.7
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++++|||||||+||.+.+..+++.++++++ ++..+ .+.++.++|...+..+
T Consensus 62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G------~~~~~-------~~~~~~~~g~~~~~i~--------------- 113 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDFG------YDPID-------ERDYAQLRQWSSRTIV--------------- 113 (273)
T ss_pred cCEEEECCcCccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH---------------
Confidence 4789999999999999999999999999983 32111 1233444443322211
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
+.++.+.++.++....|++.+.. +....++||||.++|+ ++|++++|+
T Consensus 114 ------------------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~pg~~e~L~~L~~~gi~laIv 164 (273)
T PRK13225 114 ------------------------RRAGLSPWQQARLLQRVQRQLGD-----CLPALQLFPGVADLLAQLRSRSLCLGIL 164 (273)
T ss_pred ------------------------HHcCCCHHHHHHHHHHHHHHHHh-----hcccCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 11123333333444455554432 2345689999999999 789999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCCC-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
||+....++.+|++ +|+..+|+.|++.+. .+||+++..++++++++|++|+||||+..|+++|++ ||+.+|+|.
T Consensus 165 Sn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~----AG~~~I~v~ 239 (273)
T PRK13225 165 SSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQ----VGLIAVAVT 239 (273)
T ss_pred eCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHH----CCCeEEEEe
Confidence 99999999999995 999999999987664 488999999999999999999999999999999998 899999999
Q ss_pred cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 238 WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 238 wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+...+++... .|++++.++++|...+
T Consensus 240 ~g~~~~~~l~~~--~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 240 WGFNDRQSLVAA--CPDWLLETPSDLLQAV 267 (273)
T ss_pred cCCCCHHHHHHC--CCCEEECCHHHHHHHH
Confidence 999988878754 5889999999996643
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=236.45 Aligned_cols=196 Identities=20% Similarity=0.255 Sum_probs=152.5
Q ss_pred EEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccccc
Q 024375 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~~ 84 (268)
|+|||||||+||.+.+..+++.+++++. |.+.. +.++++.++|..++..+ +.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~g~~~~~~~--~~~------------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEEYRRHLGRYFPDIM--RIM------------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHHHHHHhCccHHHHH--HHc-------------
Confidence 6899999999999999999999999862 22111 12356666776554432 111
Q ss_pred ccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCC
Q 024375 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK 161 (268)
+ ++... .+. .++..| . .....++|||+.++|+ ++|++++|+||+
T Consensus 54 --~----------------------~~~~~-~~~--~~~~~~-~-----~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~ 100 (205)
T TIGR01454 54 --G----------------------LPLEM-EEP--FVRESY-R-----LAGEVEVFPGVPELLAELRADGVGTAIATGK 100 (205)
T ss_pred --C----------------------CCHHH-HHH--HHHHHH-H-----hhcccccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 1 11000 000 011111 1 1234689999999999 789999999999
Q ss_pred chHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+...++..+++ +|+..+|+.++|.+ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|+|.
T Consensus 101 ~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~----~Gi~~i~~~ 175 (205)
T TIGR01454 101 SGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARA----AGTATVAAL 175 (205)
T ss_pred chHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHH----cCCeEEEEE
Confidence 99999999995 99999999999875 2599999999999999999999999999999999999 899999999
Q ss_pred cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 238 WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 238 wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+++.+++... .|++++.++.+|...+
T Consensus 176 ~g~~~~~~l~~~--~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 176 WGEGDAGELLAA--RPDFLLRKPQSLLALC 203 (205)
T ss_pred ecCCChhhhhhc--CCCeeeCCHHHHHHHh
Confidence 999998887654 5889999999998765
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=242.47 Aligned_cols=216 Identities=13% Similarity=0.043 Sum_probs=157.3
Q ss_pred CcEEEEecCcccccChhH-HHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~-i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.++|||||||||+||... ...+++.++++++ ++.. .++++..+|.+....+ +.+..
T Consensus 4 ~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~G~~~~~~~--~~~~~------- 60 (267)
T PRK13478 4 IQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFG------VEIT--------LEEARGPMGLGKWDHI--RALLK------- 60 (267)
T ss_pred eEEEEEcCCCCeecCCCccHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH--HHHHh-------
Confidence 489999999999999654 3678899998883 3211 1345566676543332 11100
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCC--CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (268)
. .. ....+.+.+|. +.+++.+....|++.|.+. +.....+|||+.++|+ ++|+++
T Consensus 61 -------~--~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~elL~~L~~~g~~l 120 (267)
T PRK13478 61 -------M--PR-------VAARWQAVFGRLPTEADVDALYAAFEPLQIAK----LADYATPIPGVLEVIAALRARGIKI 120 (267)
T ss_pred -------c--HH-------HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HhhcCCCCCCHHHHHHHHHHCCCEE
Confidence 0 00 01112222332 3444555555566555443 2345689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCC-ceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f-~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
+|+||+++..+..+|+. +|+..+| +.|+|++ .||+|+++..+++++++. +++|+|||||.+|+++|++ |
T Consensus 121 ~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~----a 195 (267)
T PRK13478 121 GSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLN----A 195 (267)
T ss_pred EEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHH----C
Confidence 99999999999999995 9988774 8898875 359999999999999996 6999999999999999999 8
Q ss_pred CCcEEEEecCCCC-----------------------HHHHHhcCCCCCeeecChhHHhhhc
Q 024375 230 GWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 230 gi~~i~v~wGy~~-----------------------~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+++|+|.||++. .+++..+ .|++++.++.+|.+.|
T Consensus 196 G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~a~~vi~~~~~l~~~l 254 (267)
T PRK13478 196 GMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAA--GAHYVIDTIADLPAVI 254 (267)
T ss_pred CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHc--CCCeehhhHHHHHHHH
Confidence 9999999999973 2455554 5789999999997655
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=243.74 Aligned_cols=210 Identities=21% Similarity=0.255 Sum_probs=164.6
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+++.++++++ ++.. ..+.++.++|.|...+. ...+..
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~-~~~l~~------- 70 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELG------RPPA-------GLEAVRHWVGNGAPVLV-RRALAG------- 70 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhChhHHHHH-HHHhcc-------
Confidence 67899999999999999999999999999984 3211 12356678888765543 122210
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
....++++++..++....+++.|... .....+|||+.++|+ ++|++++|
T Consensus 71 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~g~~l~i 122 (272)
T PRK13223 71 -----------------------SIDHDGVDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQGVEMAL 122 (272)
T ss_pred -----------------------cccccCCCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHCCCeEEE
Confidence 00112233444445555556655432 124689999999999 68999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||++...++.+|++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 123 vTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~----aGi~~ 197 (272)
T PRK13223 123 ITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKA----AGVQC 197 (272)
T ss_pred EECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999876 2599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
++|.|||+...++... .|++++.++.+|...
T Consensus 198 i~v~~G~~~~~~l~~~--~~~~vi~~l~el~~~ 228 (272)
T PRK13223 198 VALSYGYNHGRPIAEE--SPALVIDDLRALLPG 228 (272)
T ss_pred EEEecCCCCchhhhhc--CCCEEECCHHHHHHH
Confidence 9999999887776654 588999999999654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=238.33 Aligned_cols=200 Identities=13% Similarity=0.106 Sum_probs=150.8
Q ss_pred cEEEEecCcccccChhHHH-HHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCEETA-LSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~-~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|||||||||+||.+.++ .+++.++++++ ++... .+.++.++|......+ ...+..
T Consensus 25 k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G------~~~~~-------~e~~~~~~G~~~~~~~-~~l~~~-------- 82 (260)
T PLN03243 25 LGVVLEWEGVIVEDDSELERKAWRALAEEEG------KRPPP-------AFLLKRAEGMKNEQAI-SEVLCW-------- 82 (260)
T ss_pred eEEEEeCCCceeCCchHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH-HHHhcc--------
Confidence 7899999999999987666 58889999984 33111 1345667887665543 222210
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
. .+.+.+.+....++..|.... .....+|||+.++|+ ++|++++|+
T Consensus 83 -----~----------------------~~~~~~~~l~~~~~~~~~~~~----~~~~~l~pg~~e~L~~L~~~g~~l~I~ 131 (260)
T PLN03243 83 -----S----------------------RDFLQMKRLAIRKEDLYEYMQ----GGLYRLRPGSREFVQALKKHEIPIAVA 131 (260)
T ss_pred -----C----------------------CCHHHHHHHHHHHHHHHHHHH----ccCcccCCCHHHHHHHHHHCCCEEEEE
Confidence 0 011122222233333332111 123579999999999 689999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||++...++.+|++ +|+..||+.|++++ .||+|+++..+++++++.|++|+|||||.+|+++|++ ||+++|
T Consensus 132 Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~----aG~~~i 206 (260)
T PLN03243 132 STRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD----GCMKCV 206 (260)
T ss_pred eCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999995 99999999999875 3599999999999999999999999999999999999 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
+|. |+++..++. .|++++.++++|..
T Consensus 207 ~v~-g~~~~~~l~----~ad~vi~~~~el~~ 232 (260)
T PLN03243 207 AVA-GKHPVYELS----AGDLVVRRLDDLSV 232 (260)
T ss_pred EEe-cCCchhhhc----cCCEEeCCHHHHHH
Confidence 995 887765543 47899999999854
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=226.67 Aligned_cols=195 Identities=17% Similarity=0.142 Sum_probs=142.7
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.+++++ |++.. +..+.+.|.+....+ +.+..
T Consensus 3 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~--~~~~~-------- 57 (218)
T PRK11587 3 CKGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EVLNFIHGKQAITSL--RHFMA-------- 57 (218)
T ss_pred CCEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HHHHHHcCCCHHHHH--HHHhc--------
Confidence 589999999999999999999999999999 34310 112223455443332 21211
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
+ .+.+.+.+.+..++ .|.. .......+|||+.++|+ ++|++++|+
T Consensus 58 -----~----------------------~~~~~~~~~~~~~~-~~~~----~~~~~~~~~pg~~e~L~~L~~~g~~~~iv 105 (218)
T PRK11587 58 -----G----------------------ASEAEIQAEFTRLE-QIEA----TDTEGITALPGAIALLNHLNKLGIPWAIV 105 (218)
T ss_pred -----c----------------------CCcHHHHHHHHHHH-HHHH----hhhcCceeCcCHHHHHHHHHHcCCcEEEE
Confidence 0 11111112222111 1111 12345689999999998 799999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||++...+...++. .|+. +|+.+++.+ .||+|+++..+++++|++|++|+|||||..|+++|++ ||+++|
T Consensus 106 Tn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~----aG~~~i 179 (218)
T PRK11587 106 TSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLA----AGCHVI 179 (218)
T ss_pred cCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHH----CCCEEE
Confidence 99999999999995 8984 567787754 3599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
+|.||+... +. ..|++++.++++|.
T Consensus 180 ~v~~~~~~~-~~----~~~~~~~~~~~el~ 204 (218)
T PRK11587 180 AVNAPADTP-RL----DEVDLVLHSLEQLT 204 (218)
T ss_pred EECCCCchh-hh----ccCCEEecchhhee
Confidence 999987432 21 25889999999873
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=239.83 Aligned_cols=199 Identities=12% Similarity=0.078 Sum_probs=150.3
Q ss_pred cEEEEecCcccccChhHHHH-HHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCEETAL-SAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~-s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|||||||||+||.+.++. +.+.++++++ ++... .+.++.++|.+....+ .+.+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G------~~~~~-------~e~~~~~~G~~~~~~l-~~ll~~-------- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEEG------KSPPP-------AFILRRVEGMKNEQAI-SEVLCW-------- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH-HHHhhc--------
Confidence 68999999999999998876 5556667773 33211 1245667776655433 122210
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
..+..+.++....+++.|.+.. .....+|||+.++|+ ++|++++|+
T Consensus 190 ---------------------------~~~~~~~e~l~~~~~~~y~~~~----~~~~~l~pGa~ElL~~Lk~~GiklaIa 238 (381)
T PLN02575 190 ---------------------------SRDPAELRRMATRKEEIYQALQ----GGIYRLRTGSQEFVNVLMNYKIPMALV 238 (381)
T ss_pred ---------------------------cCCHHHHHHHHHHHHHHHHHHh----ccCCCcCcCHHHHHHHHHHCCCeEEEE
Confidence 0112233334444555554332 234689999999999 799999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCCC----CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~~----~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+++..++.+|++ +||..||+.|+|++. ||+|+++..+++++|+.|++|+|||||..|+++|++ ||+++|
T Consensus 239 Sn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~----AGm~~I 313 (381)
T PLN02575 239 STRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD----ARMKCV 313 (381)
T ss_pred eCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999999996 999999999999762 599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
+|.||+ ...++ ..+++++.++.+|.
T Consensus 314 gV~~~~-~~~~l----~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 314 AVASKH-PIYEL----GAADLVVRRLDELS 338 (381)
T ss_pred EECCCC-ChhHh----cCCCEEECCHHHHH
Confidence 999986 33333 24789999999983
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=222.85 Aligned_cols=209 Identities=25% Similarity=0.294 Sum_probs=161.6
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+....+++.++++++ .+... .+.++.++|.+...++ .+.+...
T Consensus 6 ~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------- 64 (226)
T PRK13222 6 IRAVAFDLDGTLVDSAPDLAAAVNAALAALG------LPPAG-------EERVRTWVGNGADVLV-ERALTWA------- 64 (226)
T ss_pred CcEEEEcCCcccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH-HHHHhhc-------
Confidence 4899999999999999999999999988884 22111 2345666777765543 2222110
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
+ ..++.++.++....+.+.|.+. ......++||+.++|+ ++|++++|+
T Consensus 65 -----~--------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i~ 115 (226)
T PRK13222 65 -----G--------------------REPDEELLEKLRELFDRHYAEN----VAGGSRLYPGVKETLAALKAAGYPLAVV 115 (226)
T ss_pred -----c--------------------CCccHHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEE
Confidence 0 0123344444445555555432 2234689999999999 689999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+....++.++++ +|+..+|+.+++.+ .||+|+++..++++++.++++|+||||+.+|+++|++ +|+++|
T Consensus 116 S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~----~g~~~i 190 (226)
T PRK13222 116 TNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARA----AGCPSV 190 (226)
T ss_pred eCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHH----CCCcEE
Confidence 99999999999996 99999999999865 3599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|.||+.+..++. ...|++++.++++|.+.|
T Consensus 191 ~v~~g~~~~~~~~--~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 191 GVTYGYNYGEPIA--LSEPDVVIDHFAELLPLL 221 (226)
T ss_pred EECcCCCCccchh--hcCCCEEECCHHHHHHHH
Confidence 9999998766554 346889999999997765
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=218.52 Aligned_cols=204 Identities=16% Similarity=0.119 Sum_probs=149.8
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+.+.+++.++ .+... .++++..+|...+..+ +.+...
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~--~~~~~~------ 64 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLG------VDISR-------REELPDTLGLRIDQVV--DLWYAR------ 64 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCC------CCCCH-------HHHHHHhhCCCHHHHH--HHHHHh------
Confidence 35899999999999999999999999998884 22110 1234445554433322 111110
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.++......+....+++.+.+. ......+|||+.++|+ ++|++++|
T Consensus 65 ---------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i 113 (222)
T PRK10826 65 ---------------------------QPWNGPSRQEVVQRIIARVISL----IEETRPLLPGVREALALCKAQGLKIGL 113 (222)
T ss_pred ---------------------------cCCCCCCHHHHHHHHHHHHHHH----HhcCCCCCCCHHHHHHHHHHCCCeEEE
Confidence 0000001112222333333222 1234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||+....++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+++|++ ||+++
T Consensus 114 ~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~----aG~~~ 188 (222)
T PRK10826 114 ASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKA----ARMRS 188 (222)
T ss_pred EeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHH----cCCEE
Confidence 999999999999996 99999999999875 3599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|+|.++....+... ..++.++.++.||.
T Consensus 189 i~v~~~~~~~~~~~---~~~~~~~~~~~dl~ 216 (222)
T PRK10826 189 IVVPAPEQQNDPRW---ALADVKLESLTELT 216 (222)
T ss_pred EEecCCccCchhhh---hhhheeccCHHHHh
Confidence 99999976543322 24789999999994
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=227.10 Aligned_cols=218 Identities=17% Similarity=0.153 Sum_probs=144.5
Q ss_pred cEEEEecCcccccCh-hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSC-EETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~-~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++|||||||||+||. +.+..+++.++++++ ++..... ......++. +|.|...+. +.+...
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G------~~~~~~~--~~~~~~~~~-~g~~~~~~~--~~~~~~------- 102 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEFG------LRPVEWD--VELYDELLN-IGGGKERMT--WYFNEN------- 102 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHcC------CCCCCCC--HHHHHHHHc-cCCChHHHH--HHHHHc-------
Confidence 789999999999999 888899999999984 3110000 000112333 666654432 222110
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccC-CCCCccHHHHHH---hCCCcEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGA-NRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~lypGv~e~L~---~~g~~l~I 157 (268)
+....+. .....+++..++....+.+.+...|.+.+... .++|||+.++|+ ++|++++|
T Consensus 103 -----~~~~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~I 165 (286)
T PLN02779 103 -----GWPTSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAV 165 (286)
T ss_pred -----CCCcccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEE
Confidence 0000000 00000111122222222222222222222222 489999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCC---CCCceEecCC---CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCC
Q 024375 158 VTSNQSRFVETLLRELAGVT---ITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~---~~f~~i~g~~---~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi 231 (268)
+||++...+..+|+. ++.. .+|+.+.+.+ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+
T Consensus 166 vTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~----aG~ 240 (286)
T PLN02779 166 CSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKA----AGM 240 (286)
T ss_pred EeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHH----cCC
Confidence 999999999999995 6433 3345553333 3599999999999999999999999999999999998 899
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
++|+|.||+++.+++ ..|+++++++.++.
T Consensus 241 ~~i~v~~g~~~~~~l----~~ad~vi~~~~~l~ 269 (286)
T PLN02779 241 RCIVTKSSYTADEDF----SGADAVFDCLGDVP 269 (286)
T ss_pred EEEEEccCCcccccc----CCCcEEECChhhcc
Confidence 999999999887655 36889999998873
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=233.44 Aligned_cols=199 Identities=12% Similarity=0.063 Sum_probs=149.5
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+++.++++++ .+.. .++++.++|......+ .+.+.
T Consensus 12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~G------~~~~--------~~~~~~~~G~~~~~~~-~~~~~---------- 66 (382)
T PLN02940 12 SHVILDLDGTLLNTDGIVSDVLKAFLVKYG------KQWD--------GREAQKIVGKTPLEAA-ATVVE---------- 66 (382)
T ss_pred CEEEECCcCcCCcCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH-HHHHH----------
Confidence 689999999999999999999999999884 3211 1234556665443322 12221
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvT 159 (268)
.++++ ...++....+++.+.+. + ....+|||+.++|+ ++|++++|+|
T Consensus 67 ------------------------~~~~~-~~~~~~~~~~~~~~~~~----~-~~~~l~pGv~elL~~Lk~~g~~l~IvT 116 (382)
T PLN02940 67 ------------------------DYGLP-CSTDEFNSEITPLLSEQ----W-CNIKALPGANRLIKHLKSHGVPMALAS 116 (382)
T ss_pred ------------------------HhCCC-CCHHHHHHHHHHHHHHH----H-ccCCCCcCHHHHHHHHHHCCCcEEEEe
Confidence 11111 00111222333333322 1 24689999999999 7999999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEE
Q 024375 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
|+++..++..|+.++|+..+|+.|++++ .||+|+++..++++++++|++|+|||||..|+++|++ ||+++|+
T Consensus 117 n~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~----aGi~~I~ 192 (382)
T PLN02940 117 NSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA----AGMEVIA 192 (382)
T ss_pred CCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH----cCCEEEE
Confidence 9999999998872389999999999876 3599999999999999999999999999999999998 8999999
Q ss_pred EecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 236 VDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 236 v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|.||+.... . ...|++++.++++|.
T Consensus 193 v~~g~~~~~--~--~~~ad~~i~sl~el~ 217 (382)
T PLN02940 193 VPSIPKQTH--L--YSSADEVINSLLDLQ 217 (382)
T ss_pred ECCCCcchh--h--ccCccEEeCCHhHcC
Confidence 999976542 2 246889999999985
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=238.26 Aligned_cols=207 Identities=16% Similarity=0.223 Sum_probs=150.8
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCC-CCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWP-SLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~-~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
|.++|||||||||+||.+.+..++++++++++. ......+ ..+.++.++|....... .+.+ .
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~---------~~~~~~~~~G~~~~~~~-~~l~-~------ 302 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVT---------PIDKYREIMGVPLPKVW-EALL-P------ 302 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCC---------CHHHHHHHcCCChHHHH-HHHh-h------
Confidence 568999999999999999999999999999831 1000011 11345555665543322 1111 0
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
..+ .+..++....|++.|.+.. .....++|||+.++|+ ++|++++
T Consensus 303 ---------------------------~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~~g~~l~ 350 (459)
T PRK06698 303 ---------------------------DHS--LEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKENNCSIY 350 (459)
T ss_pred ---------------------------hcc--hhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHHCCCeEE
Confidence 000 1111112222333332211 1234689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCCC---CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~---~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
|+||++...+..+|++ +|+..||+.+++.+. +|||+++..++++++ |++|+||||+.+|+++|++ ||+++
T Consensus 351 IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~----AG~~~ 423 (459)
T PRK06698 351 IASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKD----NGLIA 423 (459)
T ss_pred EEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHH----CCCeE
Confidence 9999999999999995 999999999998762 489999999998864 6899999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||++..+++ ..|++++.++++|...|
T Consensus 424 I~v~~~~~~~~~~----~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 424 IGCNFDFAQEDEL----AQADIVIDDLLELKGIL 453 (459)
T ss_pred EEEeCCCCccccc----CCCCEEeCCHHHHHHHH
Confidence 9999999765543 25899999999997765
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=212.19 Aligned_cols=121 Identities=21% Similarity=0.235 Sum_probs=106.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
...+|||+.++|+ ++|++++|+||++...+...|++ +|+..||+.|++++ .||+|+++..+++++|++|+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3589999999999 68999999999999999999996 99999999999764 3599999999999999999999
Q ss_pred EEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 210 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 210 ~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|||||. +|+++|++ +|+++|+|.||+....+.. ....|++.+.++.+|
T Consensus 171 ~~igDs~~~di~~A~~----aG~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~el 220 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKN----LGMKTVWINQGKSSKMEDD-VYPYPDYEISSLREL 220 (221)
T ss_pred EEECCChHHHHHHHHH----CCCEEEEECCCCCcccccc-cccCCCeeeCcHHhh
Confidence 9999998 89999999 8999999999987543322 234688999999876
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=211.18 Aligned_cols=187 Identities=14% Similarity=0.089 Sum_probs=134.5
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+|+. .+++.+++++ |++ .++++..+|.+....+ ...
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~------g~~----------~~~~~~~~g~~~~~~~-~~~---------- 49 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKY------NIP----------TDHILKMIQDERFRDP-GEL---------- 49 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhc------CCC----------HHHHHHHHhHhhhcCH-HHH----------
Confidence 88999999999999954 4566777777 333 1244555554322211 011
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~Iv 158 (268)
++.+.+++.+.+..|++ ..+.....+|||+.++|+ +++++++++
T Consensus 50 ---------------------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~pG~~e~L~~L~~~~~~~i~ 95 (197)
T PHA02597 50 ---------------------------FGCDQELAKKLIEKYNN-------SDFIRYLSAYDDALDVINKLKEDYDFVAV 95 (197)
T ss_pred ---------------------------hcccHHHHHHHhhhhhH-------HHHHHhccCCCCHHHHHHHHHhcCCEEEE
Confidence 11122333333333332 123344679999999999 445689999
Q ss_pred cCCchHHHHHHHHHhcCCCC----CCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccC--CC
Q 024375 159 TSNQSRFVETLLRELAGVTI----TPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD--GW 231 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~----~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~a--gi 231 (268)
||++.......++. +++.. +|+.++|.+ .+|||+++..+++++| |++++|||||.+|+++|++ | ||
T Consensus 96 Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~----a~~Gi 168 (197)
T PHA02597 96 TALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHE----ALSQL 168 (197)
T ss_pred eCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHH----HHcCC
Confidence 99988877777774 87764 567787765 4599999999999999 8889999999999999998 8 99
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
++|+|.||+. ...+.|.+.+.+++++.+
T Consensus 169 ~~i~~~~~~~------~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 169 PVIHMLRGER------DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred cEEEecchhh------ccccchhhhhccHHHHhc
Confidence 9999999975 345678899999999865
|
2 hypothetical protein; Provisional |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-28 Score=209.55 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=105.8
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCC-CCcE
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~ 209 (268)
...+|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++..+++++|+. +++|
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3579999999999 77899999999999999999996 99999999999865 359999999999999975 4799
Q ss_pred EEEcCcH-hhHHHhhccCccCCCcEEEEecC-CCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 210 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 210 ~~VGDs~-~Di~aa~~~~~~agi~~i~v~wG-y~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
+||||+. +|+++|++ +|+++|++.|+ +... . ...|++.+.++++|...||
T Consensus 172 ~~vgD~~~~Di~~A~~----aG~~~i~~~~~~~~~~---~--~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 172 LMVGDNLHSDILGGIN----AGIDTCWLNAHGREQP---E--GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred EEEcCCcHHHHHHHHH----CCCcEEEECCCCCCCC---C--CCCCeEEECCHHHHHHHHh
Confidence 9999998 69999998 89999999854 3221 1 2368999999999988775
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=204.97 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=107.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcC-CCCCCc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP-EHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l-~~~~~~ 208 (268)
..++|||+.++|+ ++ ++++|+||+....++.+|++ +|+..+|+.|++++ .||+|+++..+++++ +++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 3589999999999 45 99999999999999999996 99999999999865 259999999999999 999999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+||||+. +|+++|++ +|+++|++.||+... . ....|++++.++++|.+.|
T Consensus 173 ~v~igD~~~~di~~A~~----~G~~~i~~~~~~~~~--~--~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQN----AGLDTCWMNPDMHPN--P--DDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred eEEECCCcHHHHHHHHH----CCCcEEEECCCCCCC--C--CCCCCceEECCHHHHHhhC
Confidence 99999998 79999998 899999999997653 1 2357899999999998764
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=211.19 Aligned_cols=203 Identities=12% Similarity=0.052 Sum_probs=142.5
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+.+.++++++ ++.. .+ +..+.+.|....... +.+
T Consensus 4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~-~~------~~~~~~~g~~~~~~~--~~~---------- 58 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEFG------ITLS-LE------EVFKRFKGVKLYEII--DII---------- 58 (221)
T ss_pred CCEEEECCCCCCCCChHHHHHHHHHHHHHcC------CCCC-HH------HHHHHhcCCCHHHHH--HHH----------
Confidence 4899999999999999999999999998883 3211 11 112233333222211 111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEcCC
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSN 161 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvTnK 161 (268)
.+.+++.. ..++....|++.+.+.+ .....+||||.++|+.-+++++|+||+
T Consensus 59 -----------------------~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~~~ivTn~ 110 (221)
T PRK10563 59 -----------------------SKEHGVTL-AKAELEPVYRAEVARLF----DSELEPIAGANALLESITVPMCVVSNG 110 (221)
T ss_pred -----------------------HHHhCCCC-CHHHHHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCCEEEEeCC
Confidence 11222211 01112223344333221 234689999999999667999999999
Q ss_pred chHHHHHHHHHhcCCCCCCc-eEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 162 QSRFVETLLRELAGVTITPD-RLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~-~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
+...+...|++ +|+..+|+ .|++++ .||+|+++..++++++++|++|+||||+..||++|++ +|+++|++
T Consensus 111 ~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~----aG~~~i~~ 185 (221)
T PRK10563 111 PVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA----AGMEVFYF 185 (221)
T ss_pred cHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCEEEEE
Confidence 99999999996 99999995 666653 3599999999999999999999999999999999998 89999999
Q ss_pred ecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 237 DWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 237 ~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
.++.++.. .. ..|+.++.++.+|...
T Consensus 186 ~~~~~~~~-~~---~~~~~~~~~~~~l~~~ 211 (221)
T PRK10563 186 CADPHNKP-ID---HPLVTTFTDLAQLPEL 211 (221)
T ss_pred CCCCCCcc-hh---hhhhHHHHHHHHHHHH
Confidence 87665432 22 2345567888887654
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=211.25 Aligned_cols=221 Identities=11% Similarity=0.089 Sum_probs=145.5
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+.+.+++.+....+ ++..... ...+.++..++.....
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~------------------ 67 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQN----EDLQRLRQALREAEPE------------------ 67 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCCH----HHHHHHHHHHHHhCch------------------
Confidence 7899999999999999999999988876620000 0100000 0011111111110000
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEcC
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvTn 160 (268)
. ...+..........+++.+|++.+..+.....+...|.. |.....+|||+.++|+ +++++++|+||
T Consensus 68 ----~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn 136 (238)
T PRK10748 68 ----I--YHDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWPLVAITN 136 (238)
T ss_pred ----h--hCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCCEEEEEC
Confidence 0 000101111122345566777655443333333333322 2234689999999999 66799999999
Q ss_pred CchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCc-HhhHHHhhccCccCCCcEEE
Q 024375 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 161 K~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs-~~Di~aa~~~~~~agi~~i~ 235 (268)
++.. +++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+ .+|+.+|++ +|+++|+
T Consensus 137 ~~~~-----~~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~----aG~~~i~ 206 (238)
T PRK10748 137 GNAQ-----PEL-FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIR----CGMQACW 206 (238)
T ss_pred CCch-----HHH-CCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHH----CCCeEEE
Confidence 8876 474 99999999999875 3599999999999999999999999999 599999998 8999999
Q ss_pred EecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 236 VDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 236 v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|..+.+...........|+..+.++++|...|
T Consensus 207 v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 207 INPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 98765432111111246999999999998765
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=201.65 Aligned_cols=178 Identities=17% Similarity=0.150 Sum_probs=129.0
Q ss_pred EEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccccc
Q 024375 4 LYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSS 83 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~ 83 (268)
+|+|||||||+||.+.+..+++.+++.++ ++.. .+..+.+.|.+....+ .+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~--------- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELG------IPFD--------EEFNESLKGVSREDSL-ERILDLG--------- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCChHHHH-HHHHHhc---------
Confidence 58999999999999999999999998883 3311 1223344454433322 1222110
Q ss_pred cccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcC
Q 024375 84 VAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTS 160 (268)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTn 160 (268)
+. .+++++.++....+.+.|.+.+.. .....+||||.++|+ ++|++++|+||
T Consensus 57 ---~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s~ 111 (185)
T TIGR01990 57 ---GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIKIALASA 111 (185)
T ss_pred ---CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEeC
Confidence 10 113333444444444444433221 123579999999999 79999999999
Q ss_pred CchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 161 K~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
+.. ....|++ +|+..+|+.+++++ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|+|
T Consensus 112 ~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~----aG~~~i~v 184 (185)
T TIGR01990 112 SKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKA----AGMFAVGV 184 (185)
T ss_pred Ccc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHH----cCCEEEec
Confidence 754 4678996 99999999999765 3599999999999999999999999999999999999 89999998
Q ss_pred e
Q 024375 237 D 237 (268)
Q Consensus 237 ~ 237 (268)
+
T Consensus 185 ~ 185 (185)
T TIGR01990 185 G 185 (185)
T ss_pred C
Confidence 4
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=200.59 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=130.5
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+....+++.++++++ ++.. .+....+.|......+ ...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~---------- 55 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYG------IEFD--------KQYNTSLGGLSREDIL-RAIL---------- 55 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcC------CCCC--------HHHHHHcCCCCHHHHH-HHHH----------
Confidence 3789999999999999999999999998884 3210 1122333443322221 1111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhh--CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
+.+ +++++++.+....+.+.|.+..+ .....+|||+.++|+ ++|++++
T Consensus 56 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~ 108 (185)
T TIGR02009 56 ------------------------KLRKPGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVG 108 (185)
T ss_pred ------------------------HhcCCCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEE
Confidence 111 23444444444444444433221 124689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|+||+ ..++.+|++ +|+..+|+.++|++ .||+|+++..++++++++|++++||||+..|+++|++ +|++
T Consensus 109 i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~----~G~~ 181 (185)
T TIGR02009 109 LGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA----AGMF 181 (185)
T ss_pred EEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----CCCe
Confidence 99999 678999996 99999999999865 3499999999999999999999999999999999999 8999
Q ss_pred EEEE
Q 024375 233 LYLV 236 (268)
Q Consensus 233 ~i~v 236 (268)
+|+|
T Consensus 182 ~i~v 185 (185)
T TIGR02009 182 AVAV 185 (185)
T ss_pred EeeC
Confidence 9986
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=202.08 Aligned_cols=173 Identities=13% Similarity=0.073 Sum_probs=126.0
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+++.++++++ ++.. .++++.+.|......+ +.+..
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~--------- 60 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRYG------LQFD--------EQAMVALNGSPTWRIA--QAIIE--------- 60 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH--HHHHH---------
Confidence 789999999999999999999999999984 3210 1233444554332221 11111
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEE
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~Iv 158 (268)
.++ ++.+++... +...|.+. ......+|||+ ++|+ +++++++|+
T Consensus 61 ------------------------~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~-e~L~~L~~~~~l~I~ 108 (188)
T PRK10725 61 ------------------------LNQADLDPHALARE---KTEAVKSM----LLDSVEPLPLI-EVVKAWHGRRPMAVG 108 (188)
T ss_pred ------------------------HhCCCCCHHHHHHH---HHHHHHHH----HhccCCCccHH-HHHHHHHhCCCEEEE
Confidence 111 111221111 11122111 12335789975 7887 566999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||+++..++..|++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++|
T Consensus 109 T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~----aG~~~i 183 (188)
T PRK10725 109 TGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA----AGMDAV 183 (188)
T ss_pred cCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH----CCCEEE
Confidence 99999999999996 99999999999875 3599999999999999999999999999999999999 899999
Q ss_pred EEe
Q 024375 235 LVD 237 (268)
Q Consensus 235 ~v~ 237 (268)
+|.
T Consensus 184 ~~~ 186 (188)
T PRK10725 184 DVR 186 (188)
T ss_pred eec
Confidence 985
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=237.75 Aligned_cols=202 Identities=16% Similarity=0.168 Sum_probs=149.7
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+|||||||+||.+.+..+++.++++++ ++.. .++++.++|.+....+ +.+..
T Consensus 76 kaVIFDlDGTLiDS~~~~~~a~~~~~~~~G------~~it--------~e~~~~~~G~~~~~~~--~~~~~--------- 130 (1057)
T PLN02919 76 SAVLFDMDGVLCNSEEPSRRAAVDVFAEMG------VEVT--------VEDFVPFMGTGEANFL--GGVAS--------- 130 (1057)
T ss_pred CEEEECCCCCeEeChHHHHHHHHHHHHHcC------CCCC--------HHHHHHHhCCCHHHHH--HHHHH---------
Confidence 789999999999999999999999999983 3311 1234555565433321 11110
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvT 159 (268)
.+++.....++..+.+.+.|.+.|... ....+|||+.++|+ ++|++++|+|
T Consensus 131 ------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~IvS 184 (1057)
T PLN02919 131 ------------------------VKGVKGFDPDAAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAVAS 184 (1057)
T ss_pred ------------------------hcCCCCCCHHHHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEEEe
Confidence 111100000111222233333322211 12358999999999 7999999999
Q ss_pred CCchHHHHHHHHHhcCCC-CCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 160 SNQSRFVETLLRELAGVT-ITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~-~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
|+....++..|++ +|+. .||+.|++.+ .||+|+++.+++++++++|++|+||||+..|+++|++ +|+++|
T Consensus 185 n~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~----aGm~~I 259 (1057)
T PLN02919 185 SADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA----AGMRCI 259 (1057)
T ss_pred CCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH----cCCEEE
Confidence 9999999999996 9996 7899999876 2599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|.||+ ..+++..+ .|++++.++.++
T Consensus 260 ~v~~~~-~~~~L~~~--~a~~vi~~l~el 285 (1057)
T PLN02919 260 AVTTTL-SEEILKDA--GPSLIRKDIGNI 285 (1057)
T ss_pred EECCCC-CHHHHhhC--CCCEEECChHHC
Confidence 999997 56677764 588999999987
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=197.57 Aligned_cols=205 Identities=18% Similarity=0.171 Sum_probs=143.0
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++||||||||||||.+-...++..++++++ ++.. .+..+...|.+....+ +.+.....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~~---- 60 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYG------IEIS--------DEEIRELHGGGIARII--DLLRKLAA---- 60 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcC------CCCC--------HHHHHHHHCCChHHHH--HHHHHHhc----
Confidence 67999999999999999999999999999994 3311 1234444453322221 22211000
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+... ....... ..++.... .......++|||.++|+ ++|+++++
T Consensus 61 ------~~~~-------------------~~~~~~~---~~~~~~~~-----~~~~~~~~~pGv~~~l~~L~~~~i~~av 107 (221)
T COG0637 61 ------GEDP-------------------ADLAELE---RLLYEAEA-----LELEGLKPIPGVVELLEQLKARGIPLAV 107 (221)
T ss_pred ------CCcc-------------------cCHHHHH---HHHHHHHH-----hhhcCCCCCccHHHHHHHHHhcCCcEEE
Confidence 0000 0000000 01111111 11344689999999999 68899999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||.++..++.+|+. .|+..||+.++.++ .||+|++++.+.++||+.|++||.|+||.+.|+||++ ||+.+
T Consensus 108 aS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a----AGm~v 182 (221)
T COG0637 108 ASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKA----AGMRV 182 (221)
T ss_pred ecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHH----CCCEE
Confidence 999999999999996 99999999988754 4699999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCH--HHHHhcCCCCCeeecChhHHhh
Q 024375 234 YLVDWGYNTP--KERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 234 i~v~wGy~~~--~el~~~~~~P~~~~~~~~~~~~ 265 (268)
|++.-+.... ..+.. .-.+..+.++.++..
T Consensus 183 v~v~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 214 (221)
T COG0637 183 VGVPAGHDRPHLDPLDA--HGADTVLLDLAELPA 214 (221)
T ss_pred EEecCCCCccccchhhh--hhcchhhccHHHHHH
Confidence 9999855432 22222 234566677776654
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=189.69 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=86.4
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC---C-----CCcHHHHHHHHhcCCCCCCc
Q 024375 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T-----GPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~---~-----~pkp~~l~~~~~~l~~~~~~ 208 (268)
...+|||+.++|+.-.++++|+||++...+...|++ +|+..+|+.|++++ . ||+|+++..+++++|++|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 457999999999943368999999999999999996 99999999999864 2 79999999999999999999
Q ss_pred EEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 209 LHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
|+||||+..|+++|++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA~~----~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKA----LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHH----cCCEEeeC
Confidence 9999999999999999 89999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=193.65 Aligned_cols=194 Identities=14% Similarity=0.069 Sum_probs=137.1
Q ss_pred cCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccccccccCC
Q 024375 9 FDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGL 88 (268)
Q Consensus 9 lDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~~~~~~~ 88 (268)
|||||+||.+.+..+++.++++++ ++.. .+.++.++|......+ ...+... +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~G~~~~~~~-~~~~~~~------------~~ 53 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYG------KTFD--------WSLKAKMMGKKAIEAA-RIFVEES------------GL 53 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcC------CCCC--------HHHHHHccCCCHHHHH-HHHHHHh------------CC
Confidence 799999999999999999999984 3210 1245566776543322 1221110 00
Q ss_pred cHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHH
Q 024375 89 TVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRF 165 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~ 165 (268)
+. ....+++.+....+...+ .....+||||.++|+ ++|++++|+||+....
T Consensus 54 ~~------------------~~~~~~~~~~~~~~~~~~--------~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 54 SD------------------SLSPEDFLVEREAMLQDL--------FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CC------------------CCCHHHHHHHHHHHHHHH--------HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 00 001111111111111111 234689999999999 7899999999999865
Q ss_pred HH-HHHHHhcCCCCCCceEecCC------CCCcHHHHHHHHhcCC---CCCCcEEEEcCcHhhHHHhhccCccCCCcEEE
Q 024375 166 VE-TLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 166 ~~-~~L~~~~gl~~~f~~i~g~~------~~pkp~~l~~~~~~l~---~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
.. .+++ +.++..+|+.+++.+ .||+|+++..++++++ ++|++|+||||+..|+++|++ +|+++|+
T Consensus 108 ~~~~~~~-~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~----aG~~~i~ 182 (220)
T PLN02811 108 FDLKTQR-HGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN----AGMSVVM 182 (220)
T ss_pred HHHHHcc-cHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH----CCCeEEE
Confidence 54 4555 368888999999866 2599999999999996 999999999999999999998 8999999
Q ss_pred EecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 236 VDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 236 v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|.||+.+...+ ..|++++.++.+|.
T Consensus 183 v~~~~~~~~~~----~~~d~vi~~~~e~~ 207 (220)
T PLN02811 183 VPDPRLDKSYC----KGADQVLSSLLDFK 207 (220)
T ss_pred EeCCCCcHhhh----hchhhHhcCHhhCC
Confidence 99998765432 25889999998873
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=192.30 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=122.2
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhH-------HHHHHHHHhcc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDT-------LLLVRLLLEMR 75 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~-------~~~~~~l~~~~ 75 (268)
.+|+|||||||+||.+.+..+++.++++++ .... ..++++.++|.|... ..+.+.+...
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 66 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFG------GVSV-------THADIDHTKLAGNANNDWQLTHRLVVDGLNSA- 66 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHc------CCCC-------CHHHHHHHHHccCccCchHHHHHHHHHhhhcc-
Confidence 379999999999999999999999999994 1111 123466667755311 0011222100
Q ss_pred cccccccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhcc--ccc---cccCCCCCccHHHHHH-
Q 024375 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTD--FTT---WIGANRLYPGVSDALK- 149 (268)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~---~~~~~~lypGv~e~L~- 149 (268)
. ..++ .+....++....|++.|.... ... -.....+.|++.++|+
T Consensus 67 -----------~-----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 117 (197)
T TIGR01548 67 -----------S-----------------SERV-RDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRE 117 (197)
T ss_pred -----------c-----------------chhc-cCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHH
Confidence 0 0000 001112233344444443211 000 0011245566689988
Q ss_pred --hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC---CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 150 --LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 150 --~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~---~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
++|++++|+||+++..++.+|++ +|+..+|+.+++++. ||+|+++..+++++++++++|+||||+.+|+++|++
T Consensus 118 l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 118 LHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred HHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHh
Confidence 68999999999999999999996 999999999998763 699999999999999999999999999999999996
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=195.44 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=94.6
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
....+|||+.++|+ ++|++++|+||++...++..|++ +|+..+|+.|++++ .||+|++++.+++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 34689999999999 78999999999999999999995 99999999999865 359999999999999999999
Q ss_pred EEEEcCcHhhHHHhhccCccCCCc-EEEEecCCCCHH
Q 024375 209 LHFVEDRLATLKNVIKEPELDGWN-LYLVDWGYNTPK 244 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~~~~~~agi~-~i~v~wGy~~~~ 244 (268)
|+|||||..|+++|++ +|++ +++|++|.+...
T Consensus 169 ~l~igDs~~di~aA~~----aG~~~~~~v~~~~~~~~ 201 (224)
T PRK14988 169 TLFIDDSEPILDAAAQ----FGIRYCLGVTNPDSGIA 201 (224)
T ss_pred EEEEcCCHHHHHHHHH----cCCeEEEEEeCCCCCcc
Confidence 9999999999999998 8997 588999987654
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-25 Score=187.32 Aligned_cols=187 Identities=16% Similarity=0.169 Sum_probs=125.1
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcc-cccc------cccchhhHHHHHHHHHhcc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMH-TLRP------VVETGYDTLLLVRLLLEMR 75 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~-~ir~------~vg~G~~~~~~~~~l~~~~ 75 (268)
++|+|||||||+||.+.+..+++.++++++ ++.. .+++...+. ..+. ..+.+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 59 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYG------VEVS-PDELEQAFRRAFKAMSEAFPNFGFS-------------- 59 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhC------CCCC-HHHHHHHHHHHHHHHHhhCCCCCCC--------------
Confidence 589999999999999999999999999884 3311 111111100 0000 00000
Q ss_pred cccccccccccCCcHHHHHhhhhhhhHHHHHhhCC-CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hC
Q 024375 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 151 (268)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~ 151 (268)
.|.+..+++ .......++..+. +.+.+.+.+..+++.|... ....+|||+.++|+ ++
T Consensus 60 ----------~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~l~~L~~~ 120 (203)
T TIGR02252 60 ----------SGLTPQQWW---QKLVRDTFGRAGVPDPESFEKIFEELYSYFATP------EPWQVYPDAIKLLKDLRER 120 (203)
T ss_pred ----------CCCCHHHHH---HHHHHHHHHhcCCCCchhHHHHHHHHHHHhcCC------CcceeCcCHHHHHHHHHHC
Confidence 011111111 1111112222221 2234444445555444221 22479999999999 68
Q ss_pred CCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccC
Q 024375 152 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEP 226 (268)
Q Consensus 152 g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~ 226 (268)
|++++|+||++.. ....|++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+||||+. +|+++|++
T Consensus 121 g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~-- 196 (203)
T TIGR02252 121 GLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARA-- 196 (203)
T ss_pred CCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHH--
Confidence 9999999999876 4788995 99999999999865 35999999999999999999999999997 89999998
Q ss_pred ccCCCcEEE
Q 024375 227 ELDGWNLYL 235 (268)
Q Consensus 227 ~~agi~~i~ 235 (268)
+|+++|+
T Consensus 197 --aG~~~i~ 203 (203)
T TIGR02252 197 --AGWRALL 203 (203)
T ss_pred --cCCeeeC
Confidence 8888873
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=183.34 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=90.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
.++|||+.++|+ ++|++++|+||.+...++..|++ +|+..+|+.|++++ .||+|+++..++++++++|++|+
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 479999999999 67999999999999999999996 99999999999875 35999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
||||+.+|+++|++ +|+++|+|..+
T Consensus 170 ~vgD~~~Di~~A~~----~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKK----FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHH----CCCcEEEecCC
Confidence 99999999999998 89999999764
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=187.16 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=91.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH--HHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~--~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~ 207 (268)
...+|||+.++|+ ++|++++|+||++... ....+.+ +++..+|+.|++++ .||+|+++..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4679999999999 6899999999987654 4444553 78889999999865 36999999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
+|+||||+..|+.+|++ +|+++|+|.++....+++..
T Consensus 171 ~~l~i~D~~~di~aA~~----aG~~~i~v~~~~~~~~~l~~ 207 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAA----LGITTIKVSDEEQAIHDLEK 207 (211)
T ss_pred HeEEEcCCHHHHHHHHH----cCCEEEEECCHHHHHHHHHH
Confidence 99999999999999998 89999999887666666554
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-24 Score=176.48 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=88.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
..++|||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+++..++++++++|+++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4589999999999 59999999999999999999996 99999999999765 3599999999999999999999
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
+||||+..|+++|++ +|+++|+|
T Consensus 154 ~~vgD~~~d~~~A~~----~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKE----AGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHH----TTSEEEEE
T ss_pred EEEeCCHHHHHHHHH----cCCeEEeC
Confidence 999999999999999 89999986
|
... |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=185.52 Aligned_cols=100 Identities=9% Similarity=-0.019 Sum_probs=85.8
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHhcCCCCCCceEecCCC--CCcHHHHHHHHhcCCCC
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQ 205 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK----~~~~~~~~L~~~~gl~~~f~~i~g~~~--~pkp~~l~~~~~~l~~~ 205 (268)
...+.++|++.++|+ ++|++++||||| ++..++.++++ +|+..+|+.|+|++. ++||+.. .+++++++
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHH-HHHHhCCC-
Confidence 345689999999999 899999999998 88899999995 999999999999764 2566555 45666665
Q ss_pred CCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
++||||+.+|+.+|++ ||+++|+|.|||++..
T Consensus 187 ---~i~vGDs~~DI~aAk~----AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKE----AGARGIRILRASNSTY 218 (237)
T ss_pred ---eEEEeCCHHHHHHHHH----CCCCEEEEEecCCCCC
Confidence 6999999999999998 8999999999998763
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.7e-22 Score=163.56 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=77.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC---CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~---~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
...++||+.++|+ ++|++++|+||++...+...++. + +..+|+.|++.+ .||+|+++..++++++++| +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3467899999999 68999999999999999999995 7 888999999865 3699999999999999999 999
Q ss_pred EEcCcHhhHHHhhc
Q 024375 211 FVEDRLATLKNVIK 224 (268)
Q Consensus 211 ~VGDs~~Di~aa~~ 224 (268)
||||+..|+++|++
T Consensus 139 ~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 139 HVGDNLNDIEGARN 152 (154)
T ss_pred EEeCCHHHHHHHHH
Confidence 99999999999998
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=171.54 Aligned_cols=106 Identities=15% Similarity=0.190 Sum_probs=93.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.+|||+.++|+ ++|++++|+||++...+...+..+.++..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 58999999999 68999999999999988877764247888999999865 359999999999999999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
|||+..|+++|++ +|+++|++.++..-.+.++.
T Consensus 164 vgD~~~di~aA~~----aG~~~i~~~~~~~~~~~l~~ 196 (199)
T PRK09456 164 FDDNADNIEAANA----LGITSILVTDKQTIPDYFAK 196 (199)
T ss_pred eCCCHHHHHHHHH----cCCEEEEecCCccHHHHHHh
Confidence 9999999999999 89999999998766655543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-22 Score=170.10 Aligned_cols=121 Identities=23% Similarity=0.230 Sum_probs=98.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecC-----C----CCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----G----TGPK 191 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~-----~----~~pk 191 (268)
.+|||+.++|+ ++|++++|+||++. +....+|++ +|+ +|+.+++. + .||+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCCC
Confidence 68999999999 78999999999973 445667775 787 46666532 1 3599
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+++..++++++++|++|+||||+.+|+++|++ +|+++|+|.||+.... +....+.|++++.++.++...|
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~----aG~~~i~v~~g~~~~~-~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA----AGVTPVLVRTGKGVTT-LAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH----CCCeEEEEcCCCCchh-hhcccCCCceeecCHHHHHHHH
Confidence 999999999999999999999999999999999 8999999999987543 3322222289999999998765
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=169.72 Aligned_cols=120 Identities=18% Similarity=0.329 Sum_probs=94.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC--CCCce---------EecCC-------CCCcHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG-------TGPKVNVLK 196 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~--~~f~~---------i~g~~-------~~pkp~~l~ 196 (268)
..+|||+.++|+ ++|++++|+||+....++.+++. +|+. .+|+. +.|.+ .++||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 469999999999 78999999999999999999996 9997 35532 33322 137999999
Q ss_pred HHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 197 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 197 ~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.++++++. ++++||||+.+|+.+|++ +|+.++. .||++...+... ..|++++.++++|...|
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~----~~~~~~~-~~~~~~~~~~~~--~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKP----GGADLFI-GYGGVQVREAVA--AKADWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhc----CCCCEEE-ecCCCccCHHHH--hcCCEEECCHHHHHHhh
Confidence 99998875 689999999999999887 6777654 466543333333 36789999999998765
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-22 Score=165.72 Aligned_cols=93 Identities=22% Similarity=0.247 Sum_probs=84.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..++||+.++|+ ++|++++|+||.+... ..++.+ +|+..+|+.|++++ .||+|+++..++++++++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 589999999999 6899999999999998 777775 99999999998754 35999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
||||+..|+++|++ +|+++|+|
T Consensus 162 ~vgD~~~di~aA~~----~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKA----AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHH----cCCEEEeC
Confidence 99999999999998 89999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.7e-22 Score=164.98 Aligned_cols=82 Identities=18% Similarity=0.198 Sum_probs=76.2
Q ss_pred CCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+|||+.++|+ +++|+||++.......+++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+|||
T Consensus 89 ~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vg 163 (175)
T TIGR01493 89 LPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVA 163 (175)
T ss_pred CCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEe
Confidence 579999999998 5899999999999999996 99999999988865 25999999999999999999999999
Q ss_pred CcHhhHHHhhc
Q 024375 214 DRLATLKNVIK 224 (268)
Q Consensus 214 Ds~~Di~aa~~ 224 (268)
|+.+|+++|++
T Consensus 164 D~~~Di~~A~~ 174 (175)
T TIGR01493 164 AHQWDLIGARK 174 (175)
T ss_pred cChhhHHHHhc
Confidence 99999999986
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.7e-21 Score=160.55 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=89.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhcCCC---------CCCceEecCCCC----CcHHHHHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG----PKVNVLKQLQ 199 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK-~~~~~~~~L~~~~gl~---------~~f~~i~g~~~~----pkp~~l~~~~ 199 (268)
...+||||.++|+ ++|++++|+||+ +...++.+|+. +|+. .||+.+++++.. |.|+++..+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4689999999999 799999999999 99999999995 9998 999999987632 3345555555
Q ss_pred hcC--CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHH
Q 024375 200 KKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 246 (268)
Q Consensus 200 ~~l--~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el 246 (268)
+.+ +++|++|+||||+..|+++|++ +|+++++|.||+.-.+.+
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~----aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWG----YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHH----hCCEEEEcCCCccHHHHH
Confidence 555 7999999999999999999998 899999999999665543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-20 Score=159.69 Aligned_cols=117 Identities=16% Similarity=0.141 Sum_probs=91.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceE------------ecCCC--CCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------------YGLGT--GPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i------------~g~~~--~pkp~~l~~~~~ 200 (268)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .|... +|||+++..+++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 479999999999 68999999999999999999996 9999888532 12111 269999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
++++++++|+||||+.+|+.+|++ +|+++ .|+ ..+.+.. .+++++. ++.++..+|
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~----ag~~i---~~~--~~~~~~~---~a~~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKA----AGLGI---AFN--AKPKLQQ---KADICINKKDLTDILPLL 219 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHh----CCCeE---EeC--CCHHHHH---hchhccCCCCHHHHHhhC
Confidence 999999999999999999999998 77764 333 3334443 2567766 445555443
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=155.28 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=104.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.++||++.++|+ .+.++++|+||-........|++ +|+..+||.|+.++ .||+|+++..+++++|++|++++|
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 589999999999 22288999999999999999996 99999999999876 359999999999999999999999
Q ss_pred EcCcHhhH-HHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 212 VEDRLATL-KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 212 VGDs~~Di-~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|||+..+. .+|++ +|+.+|++..+.... ......|++.+.++.++...+
T Consensus 177 VgD~~~~di~gA~~----~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 177 VGDSLENDILGARA----LGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred ECCChhhhhHHHHh----cCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 99988666 99998 899999888775443 222257999999999997765
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=159.21 Aligned_cols=125 Identities=16% Similarity=0.046 Sum_probs=100.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH--------HHHHHHHHhcCCCCCCceEe-cCC----CCCcHHHHHHHHhc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLG----TGPKVNVLKQLQKK 201 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~--------~~~~~L~~~~gl~~~f~~i~-g~~----~~pkp~~l~~~~~~ 201 (268)
..+||||.++|+ ++|++++|+||++.. .+...++. +|++.+|..+. +++ .||+|+++.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 478999999999 789999999999852 24445774 88876654433 322 36999999999999
Q ss_pred CCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHH----HHhcCCCCCeeecChhHHhhhc
Q 024375 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE----RAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 202 l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~e----l~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++.+|++|+||||+.+|+++|++ +|+.+|+|.||++.... .......|++++.++++|...|
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAK----VNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHH----CCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 99999999999999999999999 89999999999976310 1112357999999999997654
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.2e-20 Score=156.78 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=87.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe---------cCCCCCcHHHHHHHHhcCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~---------g~~~~pkp~~l~~~~~~l~~ 204 (268)
...+|||+.++|+ ++ ++++|+||+....++.++++ +|+..+|+..+ |.+ .++|+....++++++.
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~-~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD-LRQPDGKRQAVKALKS 142 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc-ccccchHHHHHHHHHH
Confidence 3679999999999 45 99999999999999999996 99988876432 222 2445555556666666
Q ss_pred CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCe-eecChhHHhhhc
Q 024375 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRI-QLLQLSDFCTKL 267 (268)
Q Consensus 205 ~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~-~~~~~~~~~~~~ 267 (268)
.+++|+|||||.+|+.++++ +|+ +|.|++. . .... ..|++ ++.++.+|...|
T Consensus 143 ~~~~~v~iGDs~~D~~~~~a----a~~---~v~~~~~-~-~~~~--~~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGE----ADA---GILFRPP-A-NVIA--EFPQFPAVHTYDELLAAI 195 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHh----CCC---CEEECCC-H-HHHH--hCCcccccCCHHHHHHHH
Confidence 67899999999999999998 564 3446653 2 2322 24565 899999997654
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.5e-20 Score=159.52 Aligned_cols=121 Identities=16% Similarity=0.143 Sum_probs=88.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC--CC--ceEecCC----CCCcHHHH----------
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TP--DRLYGLG----TGPKVNVL---------- 195 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~f--~~i~g~~----~~pkp~~l---------- 195 (268)
...+|||+.++|+ ++|++++|+||+...+++.+|++ + +.. ++ +..++++ .+|+|++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 3689999999999 79999999999999999999996 7 643 21 2223322 13555542
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
..++++++..+++|+||||+.+|+.+|++ ||+.++ . + ...+.......|.+.+++..|+...|+
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa~~----Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAAKQ----ADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHHHH----CCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 36778888899999999999999999998 777333 2 2 112222234568888999999877653
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.9e-20 Score=153.43 Aligned_cols=117 Identities=23% Similarity=0.242 Sum_probs=97.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecC------------C
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------G 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~------------~ 187 (268)
..+||||.++|+ ++|++++|+||++. .....++++ +++. |+.++.. +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCC
Confidence 368999999999 79999999999995 455677885 7776 5655421 1
Q ss_pred ---CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE-EEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 188 ---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 188 ---~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~-i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
.||+|+++..+++++++++++|+||||+.+||++|++ +|+++ ++|.||++..... ...|++++.++++|
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~----aG~~~~i~v~~g~~~~~~~---~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA----AKVKTNVLVRTGKPITPEA---ENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH----CCCcEEEEEecCCcccccc---cccCCEEeccHHHh
Confidence 3699999999999999999999999999999999998 89998 8999998743222 24689999999988
Q ss_pred h
Q 024375 264 C 264 (268)
Q Consensus 264 ~ 264 (268)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-20 Score=161.47 Aligned_cols=98 Identities=12% Similarity=0.062 Sum_probs=81.9
Q ss_pred cccCCCCCccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHhcCC--CCCCceEecCCC--CCcHHHHHHHHhcC
Q 024375 134 WIGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGV--TITPDRLYGLGT--GPKVNVLKQLQKKP 202 (268)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~~l~IvTn----K~~~~~~~~L~~~~gl--~~~f~~i~g~~~--~pkp~~l~~~~~~l 202 (268)
+...+.||||+.++|+ ++|+++++||| |.+..++.+++. +|+ ..+|+.++|++. |+++.. +++++
T Consensus 109 ~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~---~l~~~ 184 (237)
T PRK11009 109 WDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQ---WLKKK 184 (237)
T ss_pred ccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHH---HHHhc
Confidence 3445789999999999 89999999999 557788999985 999 899999998774 343332 44566
Q ss_pred CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
++ ++||||+.+|+++|++ ||+++|+|.|||++.
T Consensus 185 ~i----~I~IGDs~~Di~aA~~----AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 185 NI----RIFYGDSDNDITAARE----AGARGIRILRAANST 217 (237)
T ss_pred CC----eEEEcCCHHHHHHHHH----cCCcEEEEecCCCCC
Confidence 65 7999999999999998 899999999999874
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.80 E-value=8e-19 Score=149.23 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=80.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-C-------------CCcHHHHHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------GPKVNVLKQLQ 199 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~-------------~pkp~~l~~~~ 199 (268)
..++|||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++..+ . .+|++.+..++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 3579999999999 68999999999999999999995 99988776554321 1 13457889999
Q ss_pred hcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 200 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 200 ~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+++++++++++||||+.+|+.+|++ ||++++...
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~----ag~~~a~~~ 190 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEV----ADISISLGD 190 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHh----cCCeEEECC
Confidence 9999999999999999999999998 788765543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-19 Score=148.52 Aligned_cols=96 Identities=27% Similarity=0.270 Sum_probs=80.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCC--CceEec-CC----CCCcHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LG----TGPKVN 193 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~--f~~i~g-~~----~~pkp~ 193 (268)
++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ ++ .||+|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 68999999999 79999999999984 577888995 998632 222222 22 369999
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
++..+++++++++++|+||||+..|+++|++ +|+++|++.-|
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~----~Gi~~v~i~~~ 147 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARN----AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----CCCCEEEecCC
Confidence 9999999999999999999999999999998 89999998654
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=143.69 Aligned_cols=94 Identities=31% Similarity=0.326 Sum_probs=81.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc--------hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcC-CCCC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-EHQG 206 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~--------~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l-~~~~ 206 (268)
.+|||+.++|+ ++|++++|+||++ .+.+..++++ +|+..++..+.+...||+|+++..+++++ +++|
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 103 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDP 103 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCCh
Confidence 68999999998 7999999999999 8899999996 99874433333322469999999999999 5999
Q ss_pred CcEEEEcC-cHhhHHHhhccCccCCCcEEEEe
Q 024375 207 LRLHFVED-RLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 207 ~~~~~VGD-s~~Di~aa~~~~~~agi~~i~v~ 237 (268)
++++|||| +..|+.+|++ +|+++|+|.
T Consensus 104 ~~~v~IGD~~~~Di~~A~~----~Gi~~i~~~ 131 (132)
T TIGR01662 104 EESVYVGDQDLTDLQAAKR----AGLAFILVA 131 (132)
T ss_pred hheEEEcCCCcccHHHHHH----CCCeEEEee
Confidence 99999999 7999999998 899999984
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-19 Score=162.18 Aligned_cols=124 Identities=10% Similarity=0.030 Sum_probs=106.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-------CCCcHHHHHHHHhcCCCCCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-------~~pkp~~l~~~~~~l~~~~~~ 208 (268)
-.|+++.+++. +.+++++|+||++..+....+.. +|+..+|+.|.+.. .||+|+++..++++++.+|++
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 45899999888 57889999999999988888884 89988888777532 269999999999999999999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++||||+. +||.+|++ +|+++++|.||.....+.+.....|++++.++++|...|
T Consensus 199 ~~~vGD~~~~Di~~a~~----~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 199 AVMIGDDCRDDVGGAQD----CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EEEECCCcHHHHHHHHH----cCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99999996 99999998 899999999998665555555678999999999997643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=144.53 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=88.1
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc---CCCCCCceEecC--CCCCcHHHHHHHHhcCCCCC
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGL--GTGPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~---gl~~~f~~i~g~--~~~pkp~~l~~~~~~l~~~~ 206 (268)
.....+||||.++|+ ++|++++|+||++....+.++++ . ++..+|+.++.. ..||+|+++..+++++|++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 345689999999999 78999999999999999998884 6 555555554421 14799999999999999999
Q ss_pred CcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 207 ~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
++|+||||+..|+++|++ ||+++|+|.|+.+.
T Consensus 170 ~e~lfVgDs~~Di~AA~~----AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 170 REILFLSDIINELDAARK----AGLHTGQLVRPGND 201 (220)
T ss_pred hHEEEEeCCHHHHHHHHH----cCCEEEEEECCCCC
Confidence 999999999999999998 89999999998643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-17 Score=140.71 Aligned_cols=199 Identities=14% Similarity=0.072 Sum_probs=139.7
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
.+++||+||||+||-..+..+++.-+.+++...+ .+......|.+..... +.+... .
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~--------------~~~~~~~mG~~~~eaa--~~~~~~-~------ 67 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYP--------------WDVKVKSMGKRTSEAA--RLFVKK-L------ 67 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcCCCCh--------------HHHHHHHcCCCHHHHH--HHHHhh-c------
Confidence 4799999999999999999999998888852211 1233345666555443 333210 0
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvT 159 (268)
+. -++.+++.......... ......+.||+..++. ..|++++++|
T Consensus 68 ----~d--------------------p~s~ee~~~e~~~~~~~--------~~~~~~~~PGa~kLv~~L~~~gip~alat 115 (222)
T KOG2914|consen 68 ----PD--------------------PVSREEFNKEEEEILDR--------LFMNSILMPGAEKLVNHLKNNGIPVALAT 115 (222)
T ss_pred ----CC--------------------CCCHHHHHHHHHHHHHH--------hccccccCCcHHHHHHHHHhCCCCeeEEe
Confidence 00 11223322222222222 2345789999999999 7999999999
Q ss_pred CCchHHHHHHHHHhcC-CCCCCceEec-CC-----CCCcHHHHHHHHhcCCCCC-CcEEEEcCcHhhHHHhhccCccCCC
Q 024375 160 SNQSRFVETLLRELAG-VTITPDRLYG-LG-----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 160 nK~~~~~~~~L~~~~g-l~~~f~~i~g-~~-----~~pkp~~l~~~~~~l~~~~-~~~~~VGDs~~Di~aa~~~~~~agi 231 (268)
|.++...+.-+.+ ++ +-..|..++. .+ .||+|+++..+++.+|..| +.|+.++|++..+++|++ ||+
T Consensus 116 ~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a----agm 190 (222)
T KOG2914|consen 116 SSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA----AGM 190 (222)
T ss_pred cCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh----cCC
Confidence 9999999999886 55 7676766554 32 2499999999999999998 999999999999999998 899
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
++|+|.- +.-... ....+++.+++++++..
T Consensus 191 ~vi~v~~-~~~~~~---~~~~~~~~~~~~~~~~~ 220 (222)
T KOG2914|consen 191 QVVGVAT-PDLSNL---FSAGATLILESLEDFKP 220 (222)
T ss_pred eEEEecC-CCcchh---hhhccceecccccccCc
Confidence 9999987 221111 23346688888877643
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=133.87 Aligned_cols=83 Identities=13% Similarity=0.221 Sum_probs=73.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-----------------------CC-C
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----------------------TG-P 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----------------------~~-p 190 (268)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|+|.+ .+ +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 589999999999 78999999999999999999995 99999999999742 12 6
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
|++++.+++++. +++++||||+.+|+.+|++
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~ 180 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKL 180 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhc
Confidence 888998887764 7899999999999999998
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-17 Score=138.20 Aligned_cols=100 Identities=22% Similarity=0.164 Sum_probs=86.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhcCCCCCCc-eEec----CC----CC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPD-RLYG----LG----TG 189 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK---------------~~~~~~~~L~~~~gl~~~f~-~i~g----~~----~~ 189 (268)
...+||||.++|+ ++|++++|+||+ +...+.++|++ +|+. |+ .++| ++ .|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCCC
Confidence 3589999999999 789999999998 46788999996 9997 65 4455 23 25
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
|+|+++..+++++++++++|+||||+.+|+++|++ +|++++++++|--+-
T Consensus 104 P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~----aGi~~i~~~~~~~~~ 153 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN----LGIRGIQYDEEELNW 153 (161)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CCCeEEEEChhhcCH
Confidence 99999999999999999999999999999999998 899999999886543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-16 Score=145.39 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=81.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhcCCCCCCceE-ecC----C----CCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----G----TGP 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK---------------~~~~~~~~L~~~~gl~~~f~~i-~g~----~----~~p 190 (268)
..+||||.++|+ ++|++++|+||| +...+..+++. +|+. |+.+ ++. + .||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCCCCC
Confidence 579999999999 789999999997 46678889996 8984 6654 442 2 359
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
+|+++..++++++++|++++||||+.+|+++|++ +|+++|+|.-.
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~----aGi~~I~v~~~ 150 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN----MGIKGIRYARE 150 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEECC
Confidence 9999999999999999999999999999999998 89999999543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=131.54 Aligned_cols=171 Identities=13% Similarity=0.072 Sum_probs=111.7
Q ss_pred cEEEEecCcccccChhHHHHHHHHHH-HHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAA-RVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~-~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
++++|||||||+ .+++..+++..+ +++ |++.. ..+.+++++|.|.......+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~~~~~ig~~l~~~~~~~~~---------- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLPLLPVIGLGLLVKGRAARW---------- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhHHHHHhccCcccchhhhhh----------
Confidence 699999999999 667888898877 666 33321 1246778888776442210000
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHH-H---hCCCcEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-K---LASSRIYI 157 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L-~---~~g~~l~I 157 (268)
+ ...+ . +....|++++++++..+.|++.|.+. ..+|||+.++| + ++|++++|
T Consensus 62 -----~--~~~~-------~--~~~~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~I 117 (211)
T PRK11590 62 -----P--MSLL-------L--WGCTFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWL 117 (211)
T ss_pred -----h--HHHH-------H--HHHHcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEE
Confidence 0 0000 0 00012567777777777777776432 57799999999 4 47999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC-----C----C---CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG-----T----G---PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----~----~---pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
||||++..++.+++. +|+.. .+.++|.+ . + ...+-+..+.+.++.+...+.+-|||.+|+..-.-
T Consensus 118 vSas~~~~~~~il~~-l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~ 194 (211)
T PRK11590 118 ITGSPQPLVEQVYFD-TPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYF 194 (211)
T ss_pred EeCCcHHHHHHHHHH-ccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHh
Confidence 999999999999995 88632 34455543 1 1 11233333333335566678899999999998876
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-16 Score=140.16 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=67.4
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
||+|+++..+++++++++++|+||||+. +||.+|++ +|+++++|.||+++.++++.....|++++.++++|-
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~----~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH----cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 6999999999999999999999999996 89999998 899999999999999888876788999999999984
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-16 Score=132.80 Aligned_cols=100 Identities=18% Similarity=0.258 Sum_probs=87.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~-~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+|||+.++|+ ++|++++|+||++ ...+..+++. +|+..++ ...||+|+++..+++++++++++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 6888888885 8875432 2347999999999999999999999999
Q ss_pred CcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHH
Q 024375 214 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA 247 (268)
Q Consensus 214 Ds~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~ 247 (268)
|+. .|+++|++ +|+++|+|.||+++.+.+.
T Consensus 116 Ds~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 116 DRLFTDVMGGNR----NGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CcchHHHHHHHH----cCCeEEEEccCcCCccccc
Confidence 998 69999998 8999999999998876443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-16 Score=143.74 Aligned_cols=98 Identities=20% Similarity=0.096 Sum_probs=90.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCceEecCC----------C-CCcHHHHHHHHhcC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------T-GPKVNVLKQLQKKP 202 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~i~g~~----------~-~pkp~~l~~~~~~l 202 (268)
..+|||+.++|+ ++|++++|+|||+...++.+++. +|+.. ||+.++|.+ . +|+|++++++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 479999999999 78999999999999999999995 99986 999999975 2 49999999999998
Q ss_pred CC-CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCC
Q 024375 203 EH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240 (268)
Q Consensus 203 ~~-~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy 240 (268)
+. .+++|+||||+.+|+++|++ +||++++|.||-
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~----~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRR----IGLECWQVAPGD 299 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHH----hCCeEEEecCCC
Confidence 88 57999999999999999999 899999999993
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.2e-17 Score=147.07 Aligned_cols=120 Identities=18% Similarity=0.165 Sum_probs=97.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHH-HHHHHhcCCCCCCceEe---cCC----CCCcHHHHHHHHhcCCCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~-~~L~~~~gl~~~f~~i~---g~~----~~pkp~~l~~~~~~l~~~~ 206 (268)
.--|||+.++|+ ++|+ ++|+|||+..... ..+.. .|+..+|+.+. |.+ .||+|+++..++++++++|
T Consensus 142 ~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~ 219 (279)
T TIGR01452 142 HFSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDP 219 (279)
T ss_pred CCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCCh
Confidence 346999999998 4676 8999999986542 23442 56666776664 333 2599999999999999999
Q ss_pred CcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhc------CCCCCeeecChhHH
Q 024375 207 LRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA------ASMPRIQLLQLSDF 263 (268)
Q Consensus 207 ~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~------~~~P~~~~~~~~~~ 263 (268)
++|+||||+. +||++|++ +|+++|+|.||+++.+++..+ ...|++++.++.+|
T Consensus 220 ~~~lmIGD~~~tDI~~A~~----aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHR----CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhEEEECCChHHHHHHHHH----cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999999994 99999998 899999999999999888753 35799999999875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=139.93 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc----e--------EecC--CCCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R--------LYGL--GTGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~----~--------i~g~--~~~pkp~~l~~~~~ 200 (268)
.+++||+.++|+ ++|++++|+|+....+++.++++ +|++..+. . +.|. ..++||+.+.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 579999999998 79999999999999999999996 99875332 1 1111 12499999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
++|+++++|++|||+.+|+.++++ ||+.+
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~----AGlgi 287 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKA----AGLGI 287 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHH----CCCeE
Confidence 999999999999999999999998 67533
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=125.43 Aligned_cols=114 Identities=12% Similarity=0.094 Sum_probs=77.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEe-------cCC--CCC-cHHHHHHHHhcCC
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-------GLG--TGP-KVNVLKQLQKKPE 203 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~-------g~~--~~p-kp~~l~~~~~~l~ 203 (268)
.++|||+.++|+ +++.+++||||+...+++.++++ +|++.+|. ..+ |.. .++ |...+.. +++.+
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~-l~~~~ 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIA-FKSLY 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHH-HHhhC
Confidence 579999999999 44469999999999999999996 99998875 222 211 123 4444444 45555
Q ss_pred CCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 204 ~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
. +++||||+.+|+.+++. ||++++ |.. .+...+.++-.| +..+.++|.+.
T Consensus 145 ~---~~v~vGDs~nDl~ml~~----Ag~~ia---~~a-k~~~~~~~~~~~--~~~~~~~~~~~ 194 (203)
T TIGR02137 145 Y---RVIAAGDSYNDTTMLSE----AHAGIL---FHA-PENVIREFPQFP--AVHTYEDLKRE 194 (203)
T ss_pred C---CEEEEeCCHHHHHHHHh----CCCCEE---ecC-CHHHHHhCCCCC--cccCHHHHHHH
Confidence 3 79999999999999998 665543 332 333333333232 34555666443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.5e-15 Score=130.29 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=85.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC---ceEecCC----CCCcHHHH----------HH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLG----TGPKVNVL----------KQ 197 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f---~~i~g~~----~~pkp~~l----------~~ 197 (268)
..++||+.++|+ ++|++++|+|++....++.+|+. ++...++ +.+++.+ .+|+|+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 589999999999 78999999999999999999995 7543333 2333333 12665543 25
Q ss_pred HHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 198 ~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
++++++..+++++||||+.+|+.+|++ ||+ +.+ -++ ..+..+-...|.+.+++..|+...|+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~----Ad~--~~a-r~~--l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQ----SDL--CFA-RDY--LLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHh----CCe--eEe-hHH--HHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 566666678899999999999999998 665 222 222 11212223347777888888877663
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.8e-16 Score=137.17 Aligned_cols=120 Identities=16% Similarity=0.197 Sum_probs=90.3
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHH--HH-HHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~--~L-~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
...|+.+...+. ++|.+ .|+||....+-.. ++ .. -.+...++...|.+ .||+|++++.+++.+++++++
T Consensus 120 ~~~y~~l~~a~~~l~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 120 QIDYEKFATATLAIRKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCCHHHHHHHHHHHHCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 456777777776 67776 8899976643311 00 10 11111233344443 269999999999999999999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
++||||+. +||.+|++ +|+++++|.||++..+++......|++++.++++|
T Consensus 198 ~~~VGD~~~~Di~~a~~----~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGID----AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEEECCCchhhHHHHHH----cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999996 89999998 89999999999999888877667899999999875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.4e-14 Score=122.19 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCce-Ee
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR-LY 184 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~-i~ 184 (268)
|++.+++......+.+.+. ...+|||+.++|+ ++|++++|+|+++...++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 7888888777665554432 2468999999998 78999999999999999999995 999877654 22
Q ss_pred c-CC-------C------CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 185 G-LG-------T------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 185 g-~~-------~------~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
. .+ . .+|++.+.+++++.+++++++++||||.+|+.+++. +|.+++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~----a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSL----VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHh----CCCcEE
Confidence 1 11 0 157788999999999999999999999999999998 676653
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-15 Score=125.85 Aligned_cols=90 Identities=23% Similarity=0.267 Sum_probs=76.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 199 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~------------~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~ 199 (268)
.+||||.++|+ ++|++++|+|||+.. .++.+|++ +|+.. +.+++.+ .||+|+++..++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 48999999999 799999999999874 57889995 99854 4455433 359999999999
Q ss_pred hcCC--CCCCcEEEEcCcH--------hhHHHhhccCccCCCcEEE
Q 024375 200 KKPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 200 ~~l~--~~~~~~~~VGDs~--------~Di~aa~~~~~~agi~~i~ 235 (268)
++++ +++++++||||+. +|+++|++ +|++++.
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~----aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN----LGLEFKY 160 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH----CCCCcCC
Confidence 9999 9999999999996 69999999 7888753
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=122.95 Aligned_cols=84 Identities=17% Similarity=0.273 Sum_probs=74.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC--CCcHHHHHHHHhcCCCCCCcEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~--~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
...++||+.++|+ ++|++++|+|+-....+..+.+. +||. +.++-++. +|.|.++.+++++++.++++|+|
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~---~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIF---DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSC---SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccc-cccc---cccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 3579999999999 78999999999999999999996 9983 44444444 78999999999999999999999
Q ss_pred EcCcHhhHHHhhc
Q 024375 212 VEDRLATLKNVIK 224 (268)
Q Consensus 212 VGDs~~Di~aa~~ 224 (268)
|||+.+|+.|+++
T Consensus 201 vGDg~nD~~al~~ 213 (215)
T PF00702_consen 201 VGDGVNDAPALKA 213 (215)
T ss_dssp EESSGGHHHHHHH
T ss_pred EccCHHHHHHHHh
Confidence 9999999999998
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.5e-15 Score=118.54 Aligned_cols=85 Identities=19% Similarity=0.070 Sum_probs=79.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhcC-------CCCCCceEecCCCCCcHHHHHHHHhcCC--CC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVLKQLQKKPE--HQ 205 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK-~~~~~~~~L~~~~g-------l~~~f~~i~g~~~~pkp~~l~~~~~~l~--~~ 205 (268)
++|||+.++|+ ++|++++|+||+ +...+..+++. ++ +..+|+.+++++.+|||+++..+++++| +.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 68999999999 789999999999 89999999995 88 8899999998877899999999999999 99
Q ss_pred CCcEEEEcCcHhhHHHhhc
Q 024375 206 GLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~ 224 (268)
|++|+||||+..|+++.++
T Consensus 108 p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cceEEEECCCHhHHHHHHh
Confidence 9999999999999987664
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-14 Score=119.44 Aligned_cols=86 Identities=20% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC--------------CC--CCcHHHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------GT--GPKVNVLKQL 198 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~--------------~~--~pkp~~l~~~ 198 (268)
..++||+.++|+ ++|++++|+|+....+++.++++ +|+..+|...+.. .. ..|++.+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 468999999999 79999999999999999999995 9998766433221 11 1678899999
Q ss_pred HhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 199 QKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 199 ~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
++++++++++++||||+.+|+.+++.
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKL 176 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhc
Confidence 99999999999999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.3e-14 Score=122.89 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=83.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
....+|+.++|+ ++|..|+|+||-..+.= .+|.. +|+..|||.++.+. .||+|.++..+++.+++.|++|+
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~v 189 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECV 189 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeE
Confidence 356788999998 79999999999987765 77885 99999999999654 46999999999999999999999
Q ss_pred EEcCcH-hhHHHhhccCccCCCcEEEEec
Q 024375 211 FVEDRL-ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 211 ~VGDs~-~Di~aa~~~~~~agi~~i~v~w 238 (268)
+|||+. +|+++|++ +|+.++.|.-
T Consensus 190 hIgD~l~nD~~gA~~----~G~~ailv~~ 214 (237)
T KOG3085|consen 190 HIGDLLENDYEGARN----LGWHAILVDN 214 (237)
T ss_pred EecCccccccHhHHH----cCCEEEEEcc
Confidence 999997 56999999 7888898873
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-14 Score=105.27 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=67.3
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
||+|.++..+++++++++++++||||+ ..||++|++ +|+++|+|.+|+.+.+++......|++++.++.|+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~----~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA----AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH----TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH----cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 699999999999999999999999999 999999999 89999999999999988887778999999999875
|
... |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.3e-15 Score=120.61 Aligned_cols=91 Identities=11% Similarity=-0.018 Sum_probs=79.0
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCceEecCCCC--CcHHHHHHHHhcCCCCCCcEEE
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~i~g~~~~--pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.+.++||+.|+|+ +++++++|+||++...++.+|++ +++.. +|+.|++.+.. .||. +.+++++++.+|++|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 4689999999999 78899999999999999999995 99965 56999987632 5666 88889999999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcE
Q 024375 212 VEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~ 233 (268)
|||+.+|+++|++ +||++
T Consensus 121 i~Ds~~~~~aa~~----ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPE----NLIPI 138 (148)
T ss_pred EECCHHHhhcCcc----CEEEe
Confidence 9999999999987 56544
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.52 E-value=8e-15 Score=134.35 Aligned_cols=111 Identities=19% Similarity=0.182 Sum_probs=92.9
Q ss_pred CCcEEEEcCCchHH-HHHHHHHhcCCCCCCceEecCC-------CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHh
Q 024375 152 SSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNV 222 (268)
Q Consensus 152 g~~l~IvTnK~~~~-~~~~L~~~~gl~~~f~~i~g~~-------~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa 222 (268)
+-.++|+|||+..+ ....+. +.|+..+|+.|.+.. .||+|.++..+++++++++++++||||+. +||.+|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQE-WAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCC-ccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 44699999999865 344455 378777888887643 16999999999999999999999999997 999999
Q ss_pred hccCccCCCcEEEEecCCCCHHHHHhc--CCCCCeeecChhHHhhhc
Q 024375 223 IKEPELDGWNLYLVDWGYNTPKERAEA--ASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 223 ~~~~~~agi~~i~v~wGy~~~~el~~~--~~~P~~~~~~~~~~~~~~ 267 (268)
++ +|+++|+|.||+++.+++... ...|++++.++++|...+
T Consensus 265 ~~----aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~ 307 (311)
T PLN02645 265 QN----GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK 307 (311)
T ss_pred HH----cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence 99 899999999999998887653 357999999999997665
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.1e-14 Score=115.51 Aligned_cols=102 Identities=13% Similarity=0.057 Sum_probs=85.4
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.|+++|++++|+||++...+..++++ +|+..+|+. .+|||+++.++++++++++++|+||||+.+|+.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~ 109 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVME 109 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 56666689999999999999999999996 999877653 268999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 224 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 224 ~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+ +|++ ++|.++. +.++ ..|++++.++.+
T Consensus 110 ~----ag~~-~~v~~~~---~~~~---~~a~~i~~~~~~ 137 (154)
T TIGR01670 110 K----VGLS-VAVADAH---PLLI---PRADYVTRIAGG 137 (154)
T ss_pred H----CCCe-EecCCcC---HHHH---HhCCEEecCCCC
Confidence 8 7776 7777665 2233 347888888753
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=111.50 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=74.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec-------CC------C-CCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-------LG------T-GPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g-------~~------~-~pkp~~l~~~~~ 200 (268)
.+++||+.++++ ++|.+++|+|+-+..+++++.+. +|++..+....- +. . ..|.+.+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 589999999999 89999999999999999999996 999876544332 11 1 157889999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
++|+++++++++|||.+|+-+=+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ 178 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEA 178 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHh
Confidence 999999999999999999999887
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.6e-13 Score=130.07 Aligned_cols=84 Identities=20% Similarity=0.311 Sum_probs=73.6
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHh
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQK 200 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~------------~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~ 200 (268)
+||||.+.|+ ++|++++|+||++. ..+..+|++ +|+. |+.++|.+ .||+|.++.++++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 6999999999 89999999999988 568899995 9984 88888765 2599999999999
Q ss_pred cCC----CCCCcEEEEcCcHhhHHHhhccC
Q 024375 201 KPE----HQGLRLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 201 ~l~----~~~~~~~~VGDs~~Di~aa~~~~ 226 (268)
+++ +++++++||||+..|+++|+++|
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag 304 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAG 304 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcC
Confidence 884 88999999999999999988743
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-12 Score=115.50 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=75.9
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCc-----hHHHHHHHHHhcCCCC---CCceEecCCCC-CcHHHHHHHHhcCCCCCC
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQ-----SRFVETLLRELAGVTI---TPDRLYGLGTG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~-----~~~~~~~L~~~~gl~~---~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.|+++.++++ ..+..+.|+|+++ ....+.+++. +++.. ++..+-....+ .|+..+..+++.+|++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 4677877776 4567778888765 3456666664 67542 11111111112 799999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
++++|||+.+|+.+++. || ++|.||.+ .+++++. +++++.+.
T Consensus 217 e~i~~GD~~NDi~m~~~----ag---~~vamgna-~~~lk~~---Ad~v~~~n 258 (272)
T PRK10530 217 NVVAFGDNFNDISMLEA----AG---LGVAMGNA-DDAVKAR---ADLVIGDN 258 (272)
T ss_pred HeEEeCCChhhHHHHHh----cC---ceEEecCc-hHHHHHh---CCEEEecC
Confidence 99999999999999998 66 47888865 4556532 46777553
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-12 Score=110.47 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=83.4
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhcc
Q 024375 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~ 225 (268)
+.|.++|++++|+||++...+..++++ +|+..+|. |. ++|++.+.++++++|+++++++||||+.+|+.++++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~- 130 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK- 130 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH-
Confidence 444579999999999999999999996 99987775 32 478999999999999999999999999999999998
Q ss_pred CccCCCcEEEEecCCCCHHHHHhcCCCCCeeec------ChhHHhhh
Q 024375 226 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLL------QLSDFCTK 266 (268)
Q Consensus 226 ~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~------~~~~~~~~ 266 (268)
+|+++ +|. +..++... .|++++. .+.+|...
T Consensus 131 ---aG~~~-~v~----~~~~~~~~--~a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 131 ---VGLSV-AVA----DAHPLLLP--RADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred ---CCCeE-ecC----ChhHHHHH--hCCEEecCCCCCCHHHHHHHH
Confidence 78874 453 33334333 4678886 56776543
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.7e-13 Score=111.51 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=67.2
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 146 e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
..|+++|++++|+|||+...+++++++ +|+..+|+.+ +|||+++..+++++++++++++||||+.+|+.+++.
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ 116 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR 116 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH
Confidence 455578999999999999999999995 9999888743 699999999999999999999999999999999998
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.5e-12 Score=99.89 Aligned_cols=95 Identities=25% Similarity=0.218 Sum_probs=85.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----C----------------CCcHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----T----------------GPKVN 193 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~----------------~pkp~ 193 (268)
...++||+.++|+ ++|++++|+||.....++..++. +|+..+|+.+++.+ . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 3589999999999 68999999999999999999996 99988888888754 1 68899
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
.+..++++++..+++++||||+.+|+.++++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~----~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKA----AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHH----cCCceeeC
Confidence 9999999999999999999999999999998 78888875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.6e-11 Score=116.14 Aligned_cols=108 Identities=14% Similarity=0.115 Sum_probs=80.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC----C--CcHHHHHHHHhcCCCCCCcE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----G--PKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~----~--pkp~~l~~~~~~l~~~~~~~ 209 (268)
+++||+.++|+ ++|++++|+||+++..++.++++ +|+ |+.++|++. + +|++.+. +.++ .+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~~ 142 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERGF 142 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccCe
Confidence 57799999999 79999999999999999999995 997 899998762 2 3555444 3333 3558
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
+|+|||.+|+.+++. +| ..++|.=+-+- ....+....|...+....
T Consensus 143 ~yvGDS~~Dlp~~~~----A~-~av~Vn~~~~l-~~~a~~~~~~~~~~~~~~ 188 (479)
T PRK08238 143 DYAGNSAADLPVWAA----AR-RAIVVGASPGV-ARAARALGPVERVFPPRP 188 (479)
T ss_pred eEecCCHHHHHHHHh----CC-CeEEECCCHHH-HHHHHHcCCcceecCCCc
Confidence 999999999999998 55 55777655432 233333446666665444
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.8e-11 Score=103.58 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=75.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH----hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 184 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~----~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~ 184 (268)
|++++++++..+.|++.|.. .+.+|||+.++|+ ++|++++|||||++..++.+.+. .++..- +.++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~i 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNLI 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcEE
Confidence 77888888888888877643 2478999999994 47999999999999999999984 665332 3344
Q ss_pred cCC----C-----C------CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 185 GLG----T-----G------PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 185 g~~----~-----~------pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
|.+ . + -|...+.+.+ +.+.+.+.+-|||.+|+..-.-
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAF 193 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHh
Confidence 432 1 1 2344444444 4455678899999999998776
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.1e-12 Score=116.87 Aligned_cols=86 Identities=17% Similarity=0.121 Sum_probs=79.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHh----cCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL----AGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~----~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.++|+ ++|++++|||||+...+..+|+ + +++..+|+.+.+. .+|||+.+.++++++++.+++++
T Consensus 30 ~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~-~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~v 107 (320)
T TIGR01686 30 SPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE-RRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSFL 107 (320)
T ss_pred CccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-hCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcEE
Confidence 467999999999 7999999999999999999999 7 7888899988765 36999999999999999999999
Q ss_pred EEcCcHhhHHHhhcc
Q 024375 211 FVEDRLATLKNVIKE 225 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~ 225 (268)
||||++.|+.+++++
T Consensus 108 fidD~~~d~~~~~~~ 122 (320)
T TIGR01686 108 FIDDNPAERANVKIT 122 (320)
T ss_pred EECCCHHHHHHHHHH
Confidence 999999999999983
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.4e-11 Score=107.20 Aligned_cols=120 Identities=21% Similarity=0.283 Sum_probs=91.7
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHH------------HHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcC
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRF------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP 202 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~------------~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l 202 (268)
...-|.-..+++. .+| ...|+||-..-. ....++...|-. . .++| ||.|.++..+++.+
T Consensus 131 ~~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~-~--~~~G---KP~~~i~~~al~~~ 203 (269)
T COG0647 131 RTLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGRE-P--TVIG---KPSPAIYEAALEKL 203 (269)
T ss_pred CCCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCc-c--cccC---CCCHHHHHHHHHHh
Confidence 3445555566666 667 668999876543 223333212211 1 2334 68999999999999
Q ss_pred CCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 203 EHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 203 ~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+..+++++||||+. +||.+|++ +|+.++.|..|..+.+++......|++++.++.++...+
T Consensus 204 ~~~~~~~~mVGD~~~TDI~~a~~----~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 204 GLDRSEVLMVGDRLDTDILGAKA----AGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred CCCcccEEEEcCCchhhHHHHHH----cCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 99999999999996 79999998 899999999999999888877789999999999986544
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-10 Score=101.11 Aligned_cols=108 Identities=19% Similarity=0.273 Sum_probs=85.8
Q ss_pred CCCCCccHHHHHH-----hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-----CC-----------------
Q 024375 137 ANRLYPGVSDALK-----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG----------------- 189 (268)
Q Consensus 137 ~~~lypGv~e~L~-----~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----~~----------------- 189 (268)
..++-||+.++++ +.|+.+.|+|.-..-+++.+|++ +|+...|+.|++.. .+
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 3688899999999 36999999999999999999995 99999999888742 10
Q ss_pred --CcHHHHHHHHhcC---CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 190 --PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 190 --pkp~~l~~~~~~l---~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
-|-.++.++++.. |..-.+++||||+.+|.-.+.+ ...-+++.+.=||.-...+.+
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~---L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR---LRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc---cCCCCEEecCCCChHHHHHhc
Confidence 2446777777653 5667899999999999988876 234678999999965555544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.3e-10 Score=98.28 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=81.1
Q ss_pred CCCCccHHHHHHh-CCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC--C--------CCcHHHHHHHHhcCCCC-
Q 024375 138 NRLYPGVSDALKL-ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--T--------GPKVNVLKQLQKKPEHQ- 205 (268)
Q Consensus 138 ~~lypGv~e~L~~-~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~--~--------~pkp~~l~~~~~~l~~~- 205 (268)
.+|=|-.+++|-+ +..+..|.||..+..|.++|++ +||...|+.|++-+ . ||.++.++.+++..|+.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 3455556787772 2222899999999999999996 99999999999744 1 38899999999999998
Q ss_pred CCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
|.+++|+.||.+.|++|++ .|+.++.|.--
T Consensus 178 p~~t~FfDDS~~NI~~ak~----vGl~tvlv~~~ 207 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKE----VGLKTVLVGRE 207 (244)
T ss_pred cCceEEEcCchhhHHHHHh----ccceeEEEEee
Confidence 9999999999999999999 78888887543
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-11 Score=118.45 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=90.2
Q ss_pred cccCCCCCccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcE
Q 024375 134 WIGANRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 134 ~~~~~~lypGv~e~L~---~~g~-~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
......+|||+.++|+ ++|+ +++|+||++...++.++++ +|++.+|..+. ..+|++.++++.+ ..+++
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l~~----~~~~v 428 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKELRE----KYGPV 428 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHHHh----cCCEE
Confidence 3445689999999999 7999 9999999999999999996 99988876443 1256666666543 44789
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeee--cChhHHhhhc
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 267 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~--~~~~~~~~~~ 267 (268)
+||||+.+|+.++++ || ++++||+...+.... .+|+++ .++++|...+
T Consensus 429 ~~vGDg~nD~~al~~----A~---vgia~g~~~~~~~~~---~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 429 AMVGDGINDAPALAA----AD---VGIAMGASGSDVAIE---TADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEEeCCHHHHHHHHh----CC---EEEEeCCCccHHHHH---hCCEEEECCCHHHHHHHH
Confidence 999999999999998 66 699999743332222 356888 7898886654
|
. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.2e-12 Score=112.92 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=79.7
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceE--ecCC----CCCcHHHHHHHHhcCCCC-CCcE
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i--~g~~----~~pkp~~l~~~~~~l~~~-~~~~ 209 (268)
-|||+.++|+ ++|+++ |+||++.......+.. +|...+|..+ +|.+ .||+|++++.++++++.. ++++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3899999998 689997 9999999999888884 8888888766 5654 259999999999999875 5789
Q ss_pred EEEcCc-HhhHHHhhccCccCCCcEEEEe
Q 024375 210 HFVEDR-LATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 210 ~~VGDs-~~Di~aa~~~~~~agi~~i~v~ 237 (268)
+||||+ .+||.+|++ +|+++++|.
T Consensus 217 ~~vGD~~~~Di~~a~~----~G~~~i~v~ 241 (242)
T TIGR01459 217 LMVGDSFYTDILGANR----LGIDTALVL 241 (242)
T ss_pred EEECCCcHHHHHHHHH----CCCeEEEEe
Confidence 999999 699999998 899999986
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.7e-11 Score=118.35 Aligned_cols=114 Identities=21% Similarity=0.275 Sum_probs=89.1
Q ss_pred ccCCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEE
Q 024375 135 IGANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g-~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
.....+|||+.++|+ ++| ++++|+||++...+++++++ +|++.+|..+.. .+|++.++++.+ .+++++
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~v~~l~~----~~~~v~ 451 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELLP---EDKLAIVKELQE----EGGVVA 451 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCCH---HHHHHHHHHHHH----cCCEEE
Confidence 345789999999999 789 99999999999999999996 999888765422 256666666553 456999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
||||+.+|+.++++ || ++|.||.++. .... .+|+++. ++..+...+
T Consensus 452 ~vGDg~nD~~al~~----A~---vgia~g~~~~--~~~~--~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 452 MVGDGINDAPALAA----AD---VGIAMGAGSD--VAIE--AADIVLLNDDLSSLPTAI 499 (556)
T ss_pred EEECChhHHHHHhh----CC---EeEEeCCCCH--HHHH--hCCEEEeCCCHHHHHHHH
Confidence 99999999999998 67 8999995433 3322 4678888 677775543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.4e-10 Score=101.66 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=56.1
Q ss_pred hCCCcEEEE---cCCchHHHHHHHHHhcCCC----CCCceEecCCCCCcHHHHHHHHhcCCCCC-CcEEEEcCcHhhHHH
Q 024375 150 LASSRIYIV---TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKN 221 (268)
Q Consensus 150 ~~g~~l~Iv---TnK~~~~~~~~L~~~~gl~----~~f~~i~g~~~~pkp~~l~~~~~~l~~~~-~~~~~VGDs~~Di~a 221 (268)
..++...++ |++..+.+.+.++. +++. .+|..|+..+ .|...+.++++.+++++ +++++|||+.+|+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 344554444 77777778888884 7775 4455555544 67788999999999999 999999999999999
Q ss_pred hhc
Q 024375 222 VIK 224 (268)
Q Consensus 222 a~~ 224 (268)
.+.
T Consensus 223 ~~~ 225 (273)
T PRK00192 223 LEA 225 (273)
T ss_pred HHh
Confidence 998
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-09 Score=97.00 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=66.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhcCCCC-CCceEecCCC-CCcHHHHHHHHhcCCCCCCc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGT-GPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~---~~~~~~L~~~~gl~~-~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~ 208 (268)
...++||+.++|+ ++|++++|+||++. +.+...|++ +|+.. .++.|+..+. .+|+.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 3679999999999 89999999999884 456688886 99975 4577776543 4888888888777776
Q ss_pred EEEEcCcHhhHHHhh
Q 024375 209 LHFVEDRLATLKNVI 223 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~ 223 (268)
++||||+.+|+.+..
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 799999999997644
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.7e-10 Score=104.48 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=81.2
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc-C-------CCCCCceEecCCCCC--------------
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA-G-------VTITPDRLYGLGTGP-------------- 190 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~-g-------l~~~f~~i~g~~~~p-------------- 190 (268)
..+.++||+.++|+ ++|++++|+|||+..+++.+|+. + | |..|||.|+++..||
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence 34678999999999 79999999999999999999995 5 7 899999999875332
Q ss_pred -----cH---H-----------HHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEec
Q 024375 191 -----KV---N-----------VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 191 -----kp---~-----------~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~w 238 (268)
++ . -+..+.+.++..+++++||||+. .||.+++.. +|+++++|.-
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~---~Gw~TvlI~p 324 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKK---RGWRTAAIIP 324 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHh---cCcEEEEEch
Confidence 11 0 24566777789999999999976 799999832 8999999964
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.1e-10 Score=92.47 Aligned_cols=88 Identities=19% Similarity=0.234 Sum_probs=76.1
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
.=|.+.+-+. ++|+++.|+||+.+.-+...+++ +|+. .|.++ .||-+..+.++++++++++++|+||||+.
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchh
Confidence 3466666666 79999999999999999999996 8874 45443 36899999999999999999999999997
Q ss_pred -hhHHHhhccCccCCCcEEEEe
Q 024375 217 -ATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 217 -~Di~aa~~~~~~agi~~i~v~ 237 (268)
+|+.+|++ +|+.||.|.
T Consensus 121 ~TDVlggnr----~G~~tIlV~ 138 (175)
T COG2179 121 FTDVLGGNR----AGMRTILVE 138 (175)
T ss_pred hhhhhcccc----cCcEEEEEE
Confidence 79999999 899999984
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=91.63 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=60.9
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-------------C--C--cHHHHHHH---
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------G--P--KVNVLKQL--- 198 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-------------~--p--kp~~l~~~--- 198 (268)
|++.++|+ ++|++++|+|+.+...++.+++. +|+... .++|.+. + . |...+.++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDD--NVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEG--GEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCce--EEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449997 79999999999999999999995 998642 2332210 1 2 88888888
Q ss_pred HhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 199 QKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 199 ~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
... +.....++|||||.+|+.+.+
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHhC
Confidence 445 778889999999999998764
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.9e-09 Score=106.40 Aligned_cols=110 Identities=17% Similarity=0.286 Sum_probs=84.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
..+++||+.++|+ ++|++++|+||+++..++.++++ +|++ ++..- ..+|++.++++.+ .+++++||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~----~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQE----KGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHH----cCCEEEEE
Confidence 4579999999999 78999999999999999999996 9996 22222 2267777766654 56789999
Q ss_pred cCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 213 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
||+.+|+.++++ || +++.||+++. .... .+|+++. ++++|...+
T Consensus 473 GDg~nD~~al~~----A~---vgia~g~g~~--~a~~--~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 473 GDGINDAPALAQ----AD---VGIAIGAGTD--VAIE--AADVVLMRNDLNDVATAI 518 (562)
T ss_pred eCCCccHHHHhh----CC---EEEEeCCcCH--HHHh--hCCEEEeCCCHHHHHHHH
Confidence 999999999998 66 5899998653 3222 3578885 777775543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.9e-09 Score=90.01 Aligned_cols=116 Identities=25% Similarity=0.259 Sum_probs=86.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhcCCCCCCceEe-cCC--------CCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-GLG--------TGPK 191 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK---------------~~~~~~~~L~~~~gl~~~f~~i~-g~~--------~~pk 191 (268)
.+.||+.+.|. +.|+++.||||. .......+|+. .|+ -|+.|+ +.. .||+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP~ 107 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKPK 107 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCCC
Confidence 67899999998 899999999994 34456667775 776 345444 431 3599
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
|-+++++++++++++++.+||||+..|+++|.+ +|+..+-+.-|.+....-.. .-..++.++.++.
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n----~gi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 173 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN----AGIKGVLVLTGIGVTTDGAG---RAKWVFDSLAEFA 173 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHHHHH----CCCCceEEEcCccccccccc---ccccccccHHHHH
Confidence 999999999999999999999999999999999 67776666666654321111 2236666666665
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.6e-08 Score=91.02 Aligned_cols=115 Identities=14% Similarity=0.170 Sum_probs=86.0
Q ss_pred hhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 024375 95 ENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (268)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~ 171 (268)
..|-.....++..++++.+.+++.+.. ....+.||+.++|+ ++|++++|+|+.....++.+|+
T Consensus 91 ~eWw~k~~~l~~~~~~~~e~i~~~v~~--------------~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~ 156 (277)
T TIGR01544 91 VEWWTKSHGLLVQQAFPKAKIKEIVAE--------------SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLR 156 (277)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHhh--------------cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH
Confidence 344445566667777777665544331 13688999999999 7999999999999999999999
Q ss_pred HhcCCCCCCceE------ecCC---C-CC--------cHH-HHHHHHhcCC--CCCCcEEEEcCcHhhHHHhhc
Q 024375 172 ELAGVTITPDRL------YGLG---T-GP--------KVN-VLKQLQKKPE--HQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 172 ~~~gl~~~f~~i------~g~~---~-~p--------kp~-~l~~~~~~l~--~~~~~~~~VGDs~~Di~aa~~ 224 (268)
+ +|+...+..| +..+ . +| |.+ +++.+.+.++ ..+++|++|||+.+|+.+|.-
T Consensus 157 ~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g 229 (277)
T TIGR01544 157 Q-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADG 229 (277)
T ss_pred H-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcC
Confidence 6 9997777777 4322 1 13 334 4445777787 789999999999999999774
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.2e-09 Score=91.54 Aligned_cols=92 Identities=18% Similarity=0.093 Sum_probs=64.4
Q ss_pred cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC
Q 024375 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 154 ~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~ 226 (268)
.+.+.++++.+.+...+++ ++.. +..+.+.. .+ +|+..+..+++.++++++++++|||+.+|+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEV-- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh--
Confidence 4566778888888888885 7642 23333321 12 79999999999999999999999999999999998
Q ss_pred ccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 227 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 227 ~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
+|+. +++.- ..+++++. .+++..+
T Consensus 192 --ag~~-vam~N---a~~~vk~~---a~~v~~~ 215 (230)
T PRK01158 192 --AGFG-VAVAN---ADEELKEA---ADYVTEK 215 (230)
T ss_pred --cCce-EEecC---ccHHHHHh---cceEecC
Confidence 5554 34432 23455543 2466554
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.3e-09 Score=110.29 Aligned_cols=114 Identities=16% Similarity=0.185 Sum_probs=89.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+++||+.++|+ ++|++++++|++.+..++.++++ +|++.+|..+ ...+|.+.+. +++..+++++|||
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~~i~----~l~~~~~~v~~vG 719 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAEAIK----RLQSQGRQVAMVG 719 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHHHHH----HHhhcCCEEEEEe
Confidence 4579999999998 78999999999999999999996 9997544322 1114555444 4455678899999
Q ss_pred CcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 214 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+.+|+.++++ ||+ +|.||.++....+. +++.....++++|...+
T Consensus 720 Dg~nD~~al~~----Agv---gia~g~g~~~a~~~--ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 720 DGINDAPALAQ----ADV---GIAMGGGSDVAIET--AAITLMRHSLMGVADAL 764 (834)
T ss_pred CCHHHHHHHHh----CCe---eEEecCCCHHHHHh--CCEEEecCCHHHHHHHH
Confidence 99999999998 665 89999887766654 46778888898887654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.2e-08 Score=86.71 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=58.7
Q ss_pred CCCcEEE-EcCCchHHHHHHHHHhcCCC----CCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhcc
Q 024375 151 ASSRIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 151 ~g~~l~I-vTnK~~~~~~~~L~~~~gl~----~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~ 225 (268)
.++.+.+ .|++....+.+.+++ .++. .+|..|.+.+. .|+..+..+++.+|++++++++|||+.||+.+-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~- 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEV- 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHh-
Confidence 4555566 677878888888885 7775 44444444332 58888999999999999999999999999999998
Q ss_pred CccCCCcE
Q 024375 226 PELDGWNL 233 (268)
Q Consensus 226 ~~~agi~~ 233 (268)
||..+
T Consensus 214 ---ag~~v 218 (221)
T TIGR02463 214 ---ADYAV 218 (221)
T ss_pred ---CCceE
Confidence 56443
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.9e-09 Score=93.19 Aligned_cols=87 Identities=16% Similarity=0.332 Sum_probs=72.4
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHH--HHHHHhcCCCC-CCceEecCCCCCcHHHHHHHHhcCCCCCCcE
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~--~~L~~~~gl~~-~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
....+|||+.|+|+ ++|++++|+||+++.... +.|++ +|+.. +|+.|++++... .+.+..++++++..++++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceE
Confidence 34679999999998 789999999999998776 78995 99998 999999876221 256777777888889999
Q ss_pred EEEcCcHhhHHHhhc
Q 024375 210 HFVEDRLATLKNVIK 224 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~ 224 (268)
+||||+..|++....
T Consensus 99 ~~vGd~~~d~~~~~~ 113 (242)
T TIGR01459 99 YLLGHLENDIINLMQ 113 (242)
T ss_pred EEeCCcccchhhhcC
Confidence 999999999876644
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.9e-08 Score=85.86 Aligned_cols=69 Identities=14% Similarity=0.074 Sum_probs=52.2
Q ss_pred CcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC---C---CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 153 ~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~---~---~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
....+.+....+.+..++++ ++... ..+.+. + .+ +|...+..+++.++++++++++|||+.+|+.+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ 183 (225)
T TIGR01482 108 SLVKMRYGIDVDTVREIIKE-LGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEV 183 (225)
T ss_pred ceEEEeecCCHHHHHHHHHh-cCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHh
Confidence 33556666677778888885 77531 111111 1 12 89999999999999999999999999999999998
|
catalyze the same reaction as SPP. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.2e-09 Score=87.81 Aligned_cols=92 Identities=8% Similarity=-0.047 Sum_probs=75.1
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCceEecCCCC--CcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~i~g~~~~--pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..=||+.|+|+ .+.+.++|.|++++.+++.+|++ ++... +|+.+++.+.. .++. +.+.+..+|.+++++||||
T Consensus 42 ~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiVD 119 (162)
T TIGR02251 42 FKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIIID 119 (162)
T ss_pred EECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEEe
Confidence 45599999999 56699999999999999999995 99875 88988887642 2222 5566777899999999999
Q ss_pred CcHhhHHHhhccCccCCCcEEEE
Q 024375 214 DRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v 236 (268)
|++.|+.++.+ +||++..-
T Consensus 120 D~~~~~~~~~~----NgI~i~~f 138 (162)
T TIGR02251 120 NSPYSYSLQPD----NAIPIKSW 138 (162)
T ss_pred CChhhhccCcc----CEeecCCC
Confidence 99999999887 67765443
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.5e-08 Score=83.84 Aligned_cols=101 Identities=24% Similarity=0.345 Sum_probs=76.7
Q ss_pred CCCCccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-----CC-----C-------------
Q 024375 138 NRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P------------- 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~-~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----~~-----p------------- 190 (268)
.+.-||+.++++ +.|. .+.|||-...-+++.+|++ +|+...|..|++.. .+ |
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 477899999999 5664 8999999999999999995 99999999888642 11 1
Q ss_pred --cHHHHHHHHhcC---CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 191 --KVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 191 --kp~~l~~~~~~l---~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
|-.++.++.... |+.-++.+||||+-+|+-.-.. ..+-+++-..-||--
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~---Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLR---LRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchh---cccCceecccCCCch
Confidence 223454443332 6677799999999999976665 356778888888853
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.7e-08 Score=99.30 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=87.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-C-------------------CCcHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------------GPKVNV 194 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~-------------------~pkp~~ 194 (268)
.+++||+.++|+ ++|+++.++|++....+..+.++ .|+..+++.++++. - +..|+-
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 478999999999 79999999999999999999996 99987766544321 0 134443
Q ss_pred HHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 195 LKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 195 l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
=..+.+.++...+.+.||||+.||+.|.++ |+ ||+.||++..+ .... .+|+++. +++++...+
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~----Ad---VGia~g~~g~~-va~~--aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKL----AD---IGVAMGQTGTD-VAKE--AADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHh----CC---eeEecCCCcCH-HHHH--hcCEEEcCCCHHHHHHHH
Confidence 344444444445789999999999999998 66 79999975333 3322 3679994 488776543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.2e-07 Score=82.01 Aligned_cols=95 Identities=11% Similarity=0.036 Sum_probs=64.7
Q ss_pred CcEEEEcCCchHHHHHHHHHhcCCCCCCc---eEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccC
Q 024375 153 SRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 153 ~~l~IvTnK~~~~~~~~L~~~~gl~~~f~---~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
..+.+++++....+...++. .++..++. .-+......|...+..+++.++++++++++|||+.+|+.+.+. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~----a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRV----V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHh----C
Confidence 44567788888888888985 77654311 1111111278899999999999999999999999999999998 5
Q ss_pred CCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 230 GWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 230 gi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
|+. +++ |- ..+++++. -+++..+
T Consensus 183 g~~-vam--~n-a~~~~k~~---A~~v~~~ 205 (215)
T TIGR01487 183 GFK-VAV--AN-ADDQLKEI---ADYVTSN 205 (215)
T ss_pred CCe-EEc--CC-ccHHHHHh---CCEEcCC
Confidence 533 333 32 23455553 2466543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.7e-07 Score=77.44 Aligned_cols=101 Identities=20% Similarity=0.265 Sum_probs=71.1
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEc-CCchHHHHHHHHHhcCCC----------CCCceEecCCCCCcHHHHHHHHhc
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVNVLKQLQKK 201 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvT-nK~~~~~~~~L~~~~gl~----------~~f~~i~g~~~~pkp~~l~~~~~~ 201 (268)
...++||+|.++|+ ++|++++|+| +...+.|+++|+. +++. .+|+.+-=. .++|...+..+.++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHHHh
Confidence 44689999999999 7999999999 4556799999995 9999 777653211 23788999999999
Q ss_pred CCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 202 l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
.|++.++++|+.|....++...+ -||.|+-|.-|-..
T Consensus 120 tgI~y~eMlFFDDe~~N~~~v~~----lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEVVSK----LGVTCVLVPDGLTW 156 (169)
T ss_dssp H---GGGEEEEES-HHHHHHHHT----TT-EEEE-SSS--H
T ss_pred cCCChhHEEEecCchhcceeeEe----cCcEEEEeCCCCCH
Confidence 99999999999999999999998 79999999998643
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.4e-06 Score=72.57 Aligned_cols=85 Identities=18% Similarity=0.369 Sum_probs=68.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC--C------C---ceEecCC-------CCCcHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--T------P---DRLYGLG-------TGPKVNVL 195 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~------f---~~i~g~~-------~~pkp~~l 195 (268)
..++=|||+|+.. ++|.+++++|.--+.++..+-.+ +||+. . | ....|.+ ++.|++.|
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 3578899999998 89999999999999999999996 99975 1 1 1122212 23789999
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
..+.+ +..-..++||||..+|++|...
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCCc
Confidence 98887 6777889999999999987664
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.7e-07 Score=79.89 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=66.4
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCCch-------HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCC
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSNQS-------RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK~~-------~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~ 204 (268)
....+|+||+.|+|+ +.|..+.++|+.+. ....+-|++|||-..+-..+++.+ |. .++.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~--------~v~~ 137 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT--------LVGG 137 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG--------GC--
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC--------eEec
Confidence 345689999999999 78877888876654 355667777666544445555544 21 1233
Q ss_pred CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 205 ~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
+ ++|.|++..+..+.+ +|+++|....-|+.... .-..+.++++++.
T Consensus 138 D----vlIDD~~~n~~~~~~----~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~ 183 (191)
T PF06941_consen 138 D----VLIDDRPHNLEQFAN----AGIPVILFDQPYNRDES-------NFPRVNNWEEIED 183 (191)
T ss_dssp S----EEEESSSHHHSS-SS----ESSEEEEE--GGGTT---------TSEEE-STTSHHH
T ss_pred c----EEecCChHHHHhccC----CCceEEEEcCCCCCCCC-------CCccCCCHHHHHH
Confidence 3 999999999998877 89999999998876432 3467778777754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.5e-07 Score=91.71 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=83.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+++||+.++|+ ++|++++++|+.....++.+.++ +|++.++. .....|++.+.++.+ +++++|||
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~-----~~~v~mvG 635 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQ-----HAPLAMVG 635 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhc-----CCCEEEEE
Confidence 3589999999999 78999999999999999999996 99964332 111147777776542 35799999
Q ss_pred CcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 214 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
|+.||+.+.++ |+ |++.||.++....+. ++......++.+|...
T Consensus 636 DgiNDapAl~~----A~---vgia~g~~~~~a~~~--adivl~~~~l~~l~~~ 679 (741)
T PRK11033 636 DGINDAPAMKA----AS---IGIAMGSGTDVALET--ADAALTHNRLRGLAQM 679 (741)
T ss_pred CCHHhHHHHHh----CC---eeEEecCCCHHHHHh--CCEEEecCCHHHHHHH
Confidence 99999999998 55 899999877655443 3444444667776543
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.9e-07 Score=82.31 Aligned_cols=85 Identities=14% Similarity=0.114 Sum_probs=60.6
Q ss_pred hCCCcEEEEcCCchHHHH-HHHHHhcCCCCCCceEe---cCC----CCCcHHHHHHHHhcCCCCCCcE-EEEcCcH-hhH
Q 024375 150 LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATL 219 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~-~~L~~~~gl~~~f~~i~---g~~----~~pkp~~l~~~~~~l~~~~~~~-~~VGDs~-~Di 219 (268)
++|-...|+||++.-... .... +.|...+|+.+. |.. .||+|+++..++++++..++++ +||||+. +||
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~-~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRF-RPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcE-eecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 455357888997742111 1111 134443433333 322 2599999999999999998887 9999998 899
Q ss_pred HHhhccCccCCCcEEEEecC
Q 024375 220 KNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 220 ~aa~~~~~~agi~~i~v~wG 239 (268)
.+|++ +|+++++|.||
T Consensus 221 ~~A~~----~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGAKN----AGFDTLLVLTG 236 (236)
T ss_pred HHHHH----CCCcEEEEecC
Confidence 99998 89999999998
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.3e-07 Score=85.56 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=59.2
Q ss_pred CCcHHHHHHHHhcC--------CC-----CCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCC
Q 024375 189 GPKVNVLKQLQKKP--------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 254 (268)
Q Consensus 189 ~pkp~~l~~~~~~l--------~~-----~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~ 254 (268)
||+|.++..+++.+ +. ++++++||||+. +||.+|++ +|+.++.|.+|-.+.++. .....|+
T Consensus 233 KP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~----~G~~silV~tG~~~~~~~-~~~~~p~ 307 (321)
T TIGR01456 233 KPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQN----YGWFSCLVKTGVYNGGDD-LKECKPT 307 (321)
T ss_pred CCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHh----CCceEEEecccccCCCCC-CCCCCCC
Confidence 58999999887776 33 457999999998 99999998 899999999994444332 2245699
Q ss_pred eeecChhHHhhhc
Q 024375 255 IQLLQLSDFCTKL 267 (268)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (268)
+++.++.++.+.+
T Consensus 308 ~vv~~l~e~~~~i 320 (321)
T TIGR01456 308 LIVNDVFDAVTKI 320 (321)
T ss_pred EEECCHHHHHHHh
Confidence 9999999997765
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.3e-06 Score=77.08 Aligned_cols=123 Identities=21% Similarity=0.202 Sum_probs=85.8
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHH--hcCCCCCCceEe---cCC----CCCcHHHHHHHHhcCCCCCC
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~--~~gl~~~f~~i~---g~~----~~pkp~~l~~~~~~l~~~~~ 207 (268)
--|+-...++. ++---+.|+||...-+- .... .-|-..+...|. |.+ .||.+.++..++++.++.|+
T Consensus 165 fsy~KL~kA~~yLqnP~clflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~ps 242 (306)
T KOG2882|consen 165 FSYPKLMKALNYLQNPGCLFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPS 242 (306)
T ss_pred cCHHHHHHHHHHhCCCCcEEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcc
Confidence 34666666666 44455788888765321 0000 000001111111 112 14899999999999999999
Q ss_pred cEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhc----CCCCCeeecChhHHhhhc
Q 024375 208 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 208 ~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~----~~~P~~~~~~~~~~~~~~ 267 (268)
+|+|||||. +||.-|++ +|..++.|..|-.+.++.+.. ...|||.++++.++...+
T Consensus 243 Rt~mvGDRL~TDIlFG~~----~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~ 303 (306)
T KOG2882|consen 243 RTCMVGDRLDTDILFGKN----CGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLL 303 (306)
T ss_pred eEEEEcccchhhhhHhhc----cCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhc
Confidence 999999997 69999998 899999999999988877665 457999999999986543
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.8e-06 Score=76.86 Aligned_cols=52 Identities=13% Similarity=0.038 Sum_probs=41.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. .+++ |-. .+++++.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~----ag~-~vAm--~NA-~~~vK~~ 241 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSM----AGK-GCIM--GNA-HQRLKDL 241 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHH----cCC-Ceee--cCC-cHHHHHh
Confidence 79999999999999999999999999999999998 554 2444 433 3445543
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.31 E-value=8.1e-06 Score=68.78 Aligned_cols=82 Identities=16% Similarity=0.289 Sum_probs=60.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC----C---CCCCce----------EecCC-C--C-CcHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG----V---TITPDR----------LYGLG-T--G-PKVN 193 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g----l---~~~f~~----------i~g~~-~--~-pkp~ 193 (268)
.++=||..|+.+ +++++..|+|+-...++..++++ .+ + +.++.- |++.+ + + -|+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch
Confidence 577899999999 89999999999999999999996 65 1 112211 11111 1 1 4666
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.+.++. -+++.++|.||+..|+.||+.
T Consensus 151 vI~~l~----e~~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 151 VIHELS----EPNESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred hHHHhh----cCCceEEEecCCcccccHhhh
Confidence 666654 345669999999999999997
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.5e-06 Score=74.33 Aligned_cols=52 Identities=15% Similarity=0.040 Sum_probs=42.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. +|.-|-+ .+++++.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~---~vAm~NA-~~~vK~~ 247 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY----AGV---GVAMGNA-IPSVKEV 247 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh----CCc---eEEecCc-cHHHHHh
Confidence 89999999999999999999999999999999998 553 4445533 3455553
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=7e-06 Score=73.41 Aligned_cols=35 Identities=11% Similarity=-0.078 Sum_probs=34.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.|...++.+++.+|+++++++.|||+.||+.+=+.
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ 222 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS 222 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH
Confidence 79999999999999999999999999999999998
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.27 E-value=9.3e-06 Score=71.90 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=44.8
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
.|...+..+++.++++++++++|||+.+|+.+.+. +|+. +++ | +..++++.. .++++.+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----~~~~-~a~--~-na~~~~k~~---a~~~~~~ 246 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEA----AGYG-VAM--G-NADEELKAL---ADYVTDS 246 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHh----CCce-eEe--c-CchHHHHHh---CCEEecC
Confidence 79999999999999999999999999999999998 6653 333 4 334455543 2455544
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.1e-06 Score=71.27 Aligned_cols=82 Identities=13% Similarity=0.108 Sum_probs=62.7
Q ss_pred cCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCC-CCC-ceEecCCC--CCcHHHHHHHHhcCCCCCCcE
Q 024375 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT--GPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~-~~f-~~i~g~~~--~pkp~~l~~~~~~l~~~~~~~ 209 (268)
..+.++||+.++|+ ++++.++|+|||++.++..+++. ++.. .+| +.|+|.+. ++...-+.. -++.+.+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~~---i~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLLR---LFPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHHH---HcCCCcccE
Confidence 44689999999999 67799999999999999999995 9988 488 78888653 222222222 246677889
Q ss_pred EEEcCcHhhHHH
Q 024375 210 HFVEDRLATLKN 221 (268)
Q Consensus 210 ~~VGDs~~Di~a 221 (268)
++|+|++.=...
T Consensus 131 vivDd~~~~~~~ 142 (156)
T TIGR02250 131 VIIDDREDVWPW 142 (156)
T ss_pred EEEeCCHHHhhc
Confidence 999999754443
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.5e-06 Score=72.58 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=33.9
Q ss_pred CcHHHHHHHHhcCCC--CCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 190 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 190 pkp~~l~~~~~~l~~--~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
.|+..+..+++.+++ +++++++|||+.+|+.+-+. +|+++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~----ag~~v 222 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEV----VDLAF 222 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHh----CCCcE
Confidence 788888988888865 67789999999999999998 66554
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.9e-06 Score=75.80 Aligned_cols=88 Identities=15% Similarity=0.242 Sum_probs=67.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHH---HHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~---~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
..+|||+.++|+ ++|++++++||++...... -|++ +|+...++.|+++. ..+...++..+....+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~-----~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSS-----FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehH-----HHHHHHHHhhccCCCCEEE
Confidence 478999999998 7999999999998444433 4464 89988888888754 3555666665555455799
Q ss_pred EcCcHhhHHHhhccCccCCCcEEE
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
|+++..+.+.+++ +|+.+++
T Consensus 117 viG~~~~~~~l~~----~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELEL----AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHH----CCCEEec
Confidence 9999999999998 7887765
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.9e-06 Score=73.49 Aligned_cols=52 Identities=19% Similarity=0.082 Sum_probs=41.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+.+=+. +| .+|.=|=.. ++++++
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~----ag---~gvam~Na~-~~~k~~ 240 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEV----AG---LGVAMGNAD-EELKEL 240 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHh----cC---eeeeccCCC-HHHHhh
Confidence 78899999999999999999999999999999887 44 444445443 445543
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.2e-06 Score=70.28 Aligned_cols=88 Identities=22% Similarity=0.255 Sum_probs=61.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC---ch-----------HHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSN---QS-----------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQ 197 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK---~~-----------~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~ 197 (268)
-++|+|.+.|+ +.|++++|+||- .. ...+.+++. +++. +...+... .||+|-|+..
T Consensus 29 ~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~ 105 (159)
T PF08645_consen 29 FFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEF 105 (159)
T ss_dssp EC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHH
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHH
Confidence 35679999999 899999999985 22 345566775 7664 33333322 3599999999
Q ss_pred HHhcCCC----CCCcEEEEcCc-----------HhhHHHhhccCccCCCcE
Q 024375 198 LQKKPEH----QGLRLHFVEDR-----------LATLKNVIKEPELDGWNL 233 (268)
Q Consensus 198 ~~~~l~~----~~~~~~~VGDs-----------~~Di~aa~~~~~~agi~~ 233 (268)
+++.++. +.++++||||+ ..|..-|.| +||++
T Consensus 106 ~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N----~gi~f 152 (159)
T PF08645_consen 106 ALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALN----CGIKF 152 (159)
T ss_dssp HCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHH----HT--E
T ss_pred HHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHH----cCCcc
Confidence 9998864 88899999996 688999998 67765
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.1e-05 Score=72.30 Aligned_cols=65 Identities=6% Similarity=-0.193 Sum_probs=47.6
Q ss_pred CcHHHHHHHHhcCCC---CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC-H-HHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-P-KERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~---~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~-~-~el~~~~~~P~~~~~~~~ 261 (268)
.|...+..+++.+|+ ++++++.|||+.||+.+=+. +|. +|.=|-.. . +.++...+.++++...+.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~----ag~---gvAM~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDV----MDY---AVVVKGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHh----CCE---EEEecCCCCCCcccccccCCceEeccCCC
Confidence 899999999999999 99999999999999999998 553 33333222 2 235444556777766544
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.11 E-value=4.7e-05 Score=75.50 Aligned_cols=52 Identities=12% Similarity=-0.007 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.||+++-+. || ++|.-|-+.. ++++.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~----AG---~gVAMgNA~e-eVK~~ 558 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL----AS---LGVALSNGAE-KTKAV 558 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH----CC---CEEEeCCCCH-HHHHh
Confidence 89999999999999999999999999999999998 55 3455564444 45543
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.4e-05 Score=81.60 Aligned_cols=114 Identities=17% Similarity=0.211 Sum_probs=79.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc-----e---------------------EecCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----R---------------------LYGLGT 188 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~-----~---------------------i~g~~~ 188 (268)
.+|+||+.++++ ++|+++.++|+.....+..+.++ .|+...-. . ++.++.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~ 614 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV 614 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence 468999999999 89999999999999999999996 99854111 1 111111
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhh
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 265 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~ 265 (268)
.|+-=.++.+.++...+.+.|+||+.||+.+-++ |+ ||+.+|.++. ..++ .+|+++.+ ++.+..
T Consensus 615 --~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~----Ad---VGia~g~g~~-~ak~---aAD~vl~dd~f~~i~~ 680 (917)
T TIGR01116 615 --EPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK----AD---IGIAMGSGTE-VAKE---ASDMVLADDNFATIVA 680 (917)
T ss_pred --CHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHh----CC---eeEECCCCcH-HHHH---hcCeEEccCCHHHHHH
Confidence 1221123333333445678999999999999998 66 4888996543 2222 36799887 666644
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.1e-05 Score=68.70 Aligned_cols=36 Identities=11% Similarity=0.015 Sum_probs=33.7
Q ss_pred CcHHHHHHHHhcCCCC--CCcEEEEcCcHhhHHHhhcc
Q 024375 190 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~--~~~~~~VGDs~~Di~aa~~~ 225 (268)
.|...+..+++.++++ .+++++|||+.+|+.+.+.+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~a 213 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVV 213 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHC
Confidence 7888999999999998 99999999999999999983
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.5e-05 Score=63.45 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=66.1
Q ss_pred CCCCccHHHHHH---hCCC--cEEEEcCC-------chHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCC--
Q 024375 138 NRLYPGVSDALK---LASS--RIYIVTSN-------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE-- 203 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~--~l~IvTnK-------~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~-- 203 (268)
..+.|.+.+.++ +.+. ++.||||. ....++.+-+. +|+. ++.-...|| ....++++.++
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP--~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKP--GCFREILKYFKCQ 130 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCC--ccHHHHHHHHhhc
Confidence 467788888887 4444 59999997 47778888785 8863 332223334 44444444443
Q ss_pred ---CCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCC
Q 024375 204 ---HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGY 240 (268)
Q Consensus 204 ---~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy 240 (268)
..|++++||||+. +||.+|+. .|+-+|+|+-|-
T Consensus 131 ~~~~~p~eiavIGDrl~TDVl~gN~----~G~~tilv~~gv 167 (168)
T PF09419_consen 131 KVVTSPSEIAVIGDRLFTDVLMGNR----MGSYTILVTDGV 167 (168)
T ss_pred cCCCCchhEEEEcchHHHHHHHhhc----cCceEEEEecCc
Confidence 3599999999997 79999998 899999998774
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=9.9e-06 Score=66.59 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=66.0
Q ss_pred HHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 145 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 145 ~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
..+|.+.|++++|+|.+....+++-.+. +|+..+|. |.. .|-..+.++++++++.++++.||||-.+|+-.=.+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q---G~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ---GIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee---chH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 3555689999999999999999999996 99975433 432 47789999999999999999999999999988777
Q ss_pred cCccCCCcE
Q 024375 225 EPELDGWNL 233 (268)
Q Consensus 225 ~~~~agi~~ 233 (268)
.|.++
T Consensus 118 ----vGls~ 122 (170)
T COG1778 118 ----VGLSV 122 (170)
T ss_pred ----cCCcc
Confidence 45544
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.6e-05 Score=67.39 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=72.4
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecCC--------------
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG-------------- 187 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~~-------------- 187 (268)
+=|....+++ +.|++++|||=.++ +.++..|+. -+-+.-.+.+++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 4466666666 79999999996554 368888884 55554445555421
Q ss_pred -CCCcHHH--H--HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 188 -TGPKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 188 -~~pkp~~--l--~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.||.|++ . ++++++.|+.|++++||.|+...+++|++ .|+.++-+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~----lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK----EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH----CCCEEEEcC
Confidence 1378888 7 99999999999999999999999999999 788888876
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00016 Score=60.01 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=54.8
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHhc---CCCCCCceEecCC---C--------C--C---cHHHH
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELA---GVTITPDRLYGLG---T--------G--P---KVNVL 195 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~---~~L~~~~---gl~~~f~~i~g~~---~--------~--p---kp~~l 195 (268)
.||+.++++ ++|+++.++|+.+...+. ..|+. + |.......+++.. . . | |.+.+
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 478888887 689999999999988774 66663 2 2222223444322 0 1 2 45566
Q ss_pred HHHHhcCCCCCCcEE-EEcCcHhhHHHhhccCccCCCc
Q 024375 196 KQLQKKPEHQGLRLH-FVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~-~VGDs~~Di~aa~~~~~~agi~ 232 (268)
..+++.+.-.....+ -+|++.+|+++=++ +||+
T Consensus 108 ~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~----~gi~ 141 (157)
T smart00775 108 RDIKSLFPPQGNPFYAGFGNRITDVISYSA----VGIP 141 (157)
T ss_pred HHHHHhcCCCCCCEEEEeCCCchhHHHHHH----cCCC
Confidence 666654332222333 38899999999998 6665
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0002 Score=60.46 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=74.4
Q ss_pred hhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc---CCC----CCCceEecCCCCCcHHHH
Q 024375 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVT----ITPDRLYGLGTGPKVNVL 195 (268)
Q Consensus 126 ~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~---gl~----~~f~~i~g~~~~pkp~~l 195 (268)
|..-|+.+-+ ..++||.+.+.|+ +.|++++|-|+-+-..-+-+.. |- .|. .|||.-+|. |......
T Consensus 91 Wa~Gy~sgel-kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fg-hs~agdL~~lfsGyfDttiG~--KrE~~SY 166 (229)
T COG4229 91 WAHGYESGEL-KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFG-HSDAGDLNSLFSGYFDTTIGK--KRESQSY 166 (229)
T ss_pred HHhccccCcc-ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhc-ccccccHHhhhcceeeccccc--cccchhH
Confidence 4444544433 4689999999999 7999999999877654433333 21 223 344543332 2334567
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.++....|++|.+++|+-|.+.-+.||+. +|+.++.+.
T Consensus 167 ~kIa~~iGl~p~eilFLSDn~~EL~AA~~----vGl~t~l~~ 204 (229)
T COG4229 167 AKIAGDIGLPPAEILFLSDNPEELKAAAG----VGLATGLAV 204 (229)
T ss_pred HHHHHhcCCCchheEEecCCHHHHHHHHh----cchheeeee
Confidence 88888899999999999999999999998 788887764
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.7e-05 Score=69.05 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=42.5
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~ 187 (268)
||+.|+|+ ++|++++|+||++++.+...|++ +|+..||+.|++++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~G 196 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGG 196 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECC
Confidence 99999999 78999999999999999999996 99999999999865
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.71 E-value=7.2e-05 Score=59.84 Aligned_cols=87 Identities=17% Similarity=0.146 Sum_probs=70.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcC------CCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP------EHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l------~~~~~ 207 (268)
.+++||.|.++|. ..|+-++.+|=+...-+.+.|+. +++..||+.++-....-|-.|+.++++.+ .++|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 4689999999999 78999999998889999999996 99999999888644334556777776644 47899
Q ss_pred cEEEEcCcHhhHHHhhc
Q 024375 208 RLHFVEDRLATLKNVIK 224 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~ 224 (268)
+++|+.|+..-+..-..
T Consensus 118 ~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 118 EIVYLDDRRIHFGNIWE 134 (164)
T ss_pred eEEEEecccccHHHHHH
Confidence 99999999776654443
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00017 Score=63.38 Aligned_cols=81 Identities=17% Similarity=0.096 Sum_probs=56.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceEecC--CCCC------cHHHHHHHHhc-
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL--GTGP------KVNVLKQLQKK- 201 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i~g~--~~~p------kp~~l~~~~~~- 201 (268)
..++.||+.++++ ++|+++.++|+.+... +.+-|.+ .|+..+ +.++-. +... |.+...++.++
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~G 195 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEG 195 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCC
Confidence 3578999999999 7999999999999776 7788886 898765 555532 2222 44444444332
Q ss_pred CCCCCCcEEEEcCcHhhHHHhh
Q 024375 202 PEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 202 l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+ +..|||..+|+.++.
T Consensus 196 YrI----v~~iGDq~sDl~G~~ 213 (229)
T TIGR01675 196 YRI----WGNIGDQWSDLLGSP 213 (229)
T ss_pred ceE----EEEECCChHHhcCCC
Confidence 222 368999999996543
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0004 Score=55.60 Aligned_cols=115 Identities=12% Similarity=0.272 Sum_probs=79.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe-cCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-GLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~-g~~~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
.-.+|+.|.++++ +. ++++|+|.-...+..++++ ..|+. .+.+. |++ |+.=.++++.|+-+-+.++||
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae-~~gi~--~~rv~a~a~----~e~K~~ii~eLkk~~~k~vmV 99 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAE-FVGIP--VERVFAGAD----PEMKAKIIRELKKRYEKVVMV 99 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHH-HcCCc--eeeeecccC----HHHHHHHHHHhcCCCcEEEEe
Confidence 3579999999999 56 9999999999999999999 48975 34554 333 343344444455455789999
Q ss_pred cCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 213 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||..||+.+-++ |.+-.+-+.-+ +-++.+.. .-|+++..+.++-..+
T Consensus 100 GnGaND~laLr~----ADlGI~tiq~e-~v~~r~l~---~ADvvik~i~e~ldl~ 146 (152)
T COG4087 100 GNGANDILALRE----ADLGICTIQQE-GVPERLLL---TADVVLKEIAEILDLL 146 (152)
T ss_pred cCCcchHHHhhh----cccceEEeccC-CcchHHHh---hchhhhhhHHHHHHHh
Confidence 999999999998 44444444333 22222222 2368888777775554
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=97.63 E-value=4.8e-05 Score=66.95 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=55.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhcCCCCCCceEe-cCCC-C------CcHHHHHHHHhc-CC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GLGT-G------PKVNVLKQLQKK-PE 203 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~---~~~~~L~~~~gl~~~f~~i~-g~~~-~------pkp~~l~~~~~~-l~ 203 (268)
++.||+.++++ ++|+++.++||.++. .+.+-|++ .|....-..+. +... . -|.+....+.++ +.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 67899999999 899999999986654 66777886 89765433343 2221 1 255555555555 34
Q ss_pred CCCCcEEEEcCcHhhHHHhh
Q 024375 204 HQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 204 ~~~~~~~~VGDs~~Di~aa~ 223 (268)
+ +++|||...|+..++
T Consensus 194 I----i~~iGD~~~D~~~~~ 209 (229)
T PF03767_consen 194 I----IANIGDQLSDFSGAK 209 (229)
T ss_dssp E----EEEEESSGGGCHCTH
T ss_pred E----EEEeCCCHHHhhccc
Confidence 4 589999999998844
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0027 Score=62.07 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG- 187 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~- 187 (268)
|++.+++++...++...|.. ..++|.+.+.++++|.. +|||..++..++.+++.++|++ .|+|.+
T Consensus 89 G~~~~el~~~~r~~l~~f~~---------~~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeL 154 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYA---------EDVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTEL 154 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHH---------HhcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEeccc
Confidence 77777776666555555432 13788888888877754 9999999999999997436864 444432
Q ss_pred ------------CCCc----HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 188 ------------TGPK----VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 188 ------------~~pk----p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.+++ .+-+..+.+.++.+... +..|||.+|...-.-
T Consensus 155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~ 206 (497)
T PLN02177 155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSI 206 (497)
T ss_pred EECcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHh
Confidence 0121 12233333444533333 899999999987665
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00013 Score=66.17 Aligned_cols=46 Identities=20% Similarity=0.105 Sum_probs=42.6
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~ 187 (268)
=|||.++|+ ++|++++|+||++++.+..+|++ +|+..+|+.|+|++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECC
Confidence 399999999 79999999999999999999996 99999999998865
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00016 Score=63.89 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=55.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC---ccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP---ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~---~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
.|...+..++++++..+.+++||||+.+|+.+.+.+. ..-|..++.|.+|-. ....++.+.+++++...
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~--------~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSK--------KTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCc--------CCCceEeCCCHHHHHHH
Confidence 5779999999999999999999999999999999730 011667788876621 23467999999998776
Q ss_pred c
Q 024375 267 L 267 (268)
Q Consensus 267 ~ 267 (268)
|
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 5
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.50 E-value=8.4e-05 Score=63.97 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=58.7
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcHh-hHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~~-Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
||.|..++.+++.+|++|++++||||-.+ |+-+|++ .||+-|.|..|=..+.+.....+.|+..+++..+-
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~----~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~A 252 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQA----CGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADA 252 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhh----hcceeEEeeccccCCcccccCCCCcchhhhhHHHH
Confidence 48999999999999999999999999875 6777887 89999999999766644555677888888776653
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0011 Score=58.84 Aligned_cols=39 Identities=18% Similarity=0.009 Sum_probs=34.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcC----cHhhHHHhhccCccCCCcEEEEe
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGD----s~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.|...+..++ ++++++.+|| +.||+++-+. -|+.++.|+
T Consensus 189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~----~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFES----ERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhC----CCcceEEeC
Confidence 7888888877 8899999999 7999999995 589999984
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0021 Score=64.59 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=35.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEE--cCcHhhHHHhhccCccCCCcEE
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFV--EDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~V--GDs~~Di~aa~~~~~~agi~~i 234 (268)
.|-..+..+++.+++..++++.| ||+.||+.+=+. ||..++
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~----Ag~gVA 655 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET----VDSPIL 655 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh----CCceEE
Confidence 78999999999999988888888 999999999987 665443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.003 Score=56.14 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=36.1
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
.|-..+..+++++++++++++.+|||.||+.+=. .+.+.|.| |-..++
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~-----~~~~~vvV--~Na~~e 212 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLE-----GGDHGVVV--GNAQPE 212 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHC-----CSSEEEE---TTS-HH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHc-----CcCCEEEE--cCCCHH
Confidence 6889999999999999999999999999998875 45555555 544444
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0023 Score=56.51 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=60.3
Q ss_pred hCCCcEEEEcCCch-----HHHHHHHHHhcCCCCCCceEecCC-------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 150 LASSRIYIVTSNQS-----RFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 150 ~~g~~l~IvTnK~~-----~~~~~~L~~~~gl~~~f~~i~g~~-------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
+.-+++.+.+.+.. ......+.+ +|+. +..++++. .+ +|...+..+++.++++++++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 34566677665432 223444553 5543 23444331 12 899999999999999999999999999
Q ss_pred hhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 217 ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 217 ~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
||+.+.+. ++..+++|. +..+++++
T Consensus 194 ND~~ml~~----~~~~~va~~---na~~~~k~ 218 (249)
T TIGR01485 194 NDIELFEI----GSVRGVIVS---NAQEELLQ 218 (249)
T ss_pred hHHHHHHc----cCCcEEEEC---CCHHHHHH
Confidence 99999996 566678884 33445554
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0007 Score=59.24 Aligned_cols=98 Identities=11% Similarity=-0.042 Sum_probs=63.5
Q ss_pred CCCcEEEEcCCc----hHHHHHHHHHhcCCCCCCceEecC----C---C-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhh
Q 024375 151 ASSRIYIVTSNQ----SRFVETLLRELAGVTITPDRLYGL----G---T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 218 (268)
Q Consensus 151 ~g~~l~IvTnK~----~~~~~~~L~~~~gl~~~f~~i~g~----~---~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~D 218 (268)
..+++.+.+... ...+...+++ ++.. +..+++. + . .+|+..+..++++++++++++++|||+.+|
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 346666665432 1234445553 5532 2344443 2 1 289999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCC-eeecC
Q 024375 219 LKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR-IQLLQ 259 (268)
Q Consensus 219 i~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~-~~~~~ 259 (268)
+.+.+. +| +++.+|-.. +++++....|. ++..+
T Consensus 188 ~~ml~~----~~---~~iav~na~-~~~k~~a~~~~~~v~~~ 221 (236)
T TIGR02471 188 EEMLRG----LT---LGVVVGNHD-PELEGLRHQQRIYFANN 221 (236)
T ss_pred HHHHcC----CC---cEEEEcCCc-HHHHHhhcCCcEEEcCC
Confidence 999997 44 344456443 45666555565 45544
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0039 Score=56.77 Aligned_cols=120 Identities=8% Similarity=-0.022 Sum_probs=66.6
Q ss_pred hhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHH---------HH-hCCCcE-EEEcCCchHHHHHHHHHhcC
Q 024375 107 EWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDA---------LK-LASSRI-YIVTSNQSRFVETLLRELAG 175 (268)
Q Consensus 107 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~---------L~-~~g~~l-~IvTnK~~~~~~~~L~~~~g 175 (268)
..|.+...+...+...++.+...+. .+.+.+ . ..|.++ +. ++-+.- .+-+...... ++.+++ .|
T Consensus 95 ~lg~~y~~ir~~L~~l~~~~~~~f~-gF~d~t-~-~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~~~~~~-~~~~~~-~g 169 (302)
T PRK12702 95 ALGLPYPCLRHILQQVRQDSHLDLI-GFGDWT-A-SELAAATGIPLEEAERAQKREYSEIFSYSGDPARL-REAFAQ-QE 169 (302)
T ss_pred ecCCCHHHHHHHHHHHHHHhCCCce-ehhhCC-H-HHHHHHhCcCHHHHHHHHhccCCcceEecCCHHHH-HHHHHH-cC
Confidence 3466677777777777777532221 111110 0 111111 11 233333 3335555555 777775 77
Q ss_pred CC----CCCceEec------------------CCC-C-CcHHHHHHHHhcCCC--CCCcEEEEcCcHhhHHHhhccCccC
Q 024375 176 VT----ITPDRLYG------------------LGT-G-PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 176 l~----~~f~~i~g------------------~~~-~-pkp~~l~~~~~~l~~--~~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
+. ..|-.+.| .+. . +|-..+..+.+.+.- .+-.++-+|||+||+.+=.. +
T Consensus 170 ~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~----~ 245 (302)
T PRK12702 170 ANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRW----S 245 (302)
T ss_pred CeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHh----C
Confidence 75 24556666 221 2 667766666665543 34479999999999999886 5
Q ss_pred CCcEEE
Q 024375 230 GWNLYL 235 (268)
Q Consensus 230 gi~~i~ 235 (268)
-+++|-
T Consensus 246 D~~vvi 251 (302)
T PRK12702 246 EQKVVL 251 (302)
T ss_pred CeeEEe
Confidence 555544
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0027 Score=64.42 Aligned_cols=109 Identities=18% Similarity=0.288 Sum_probs=81.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
-++-|+..+.++ ++|+++.++|.-.+..++.+-++ +|++.++.-+. ..-|.+.++++.++ | ..+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Aell---PedK~~~V~~l~~~-g---~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAELL---PEDKAEIVRELQAE-G---RKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccCC---cHHHHHHHHHHHhc-C---CEEEEEeC
Confidence 468899999998 89999999999999999999996 99965543322 12477788777643 2 56899999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhh
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 265 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~ 265 (268)
..||.-+=.. | -||+.-|-|+.-..+.+ |+++.+ |.++..
T Consensus 608 GINDAPALA~----A---dVGiAmG~GtDvA~eaA----DvvL~~~dL~~v~~ 649 (713)
T COG2217 608 GINDAPALAA----A---DVGIAMGSGTDVAIEAA----DVVLMRDDLSAVPE 649 (713)
T ss_pred CchhHHHHhh----c---CeeEeecCCcHHHHHhC----CEEEecCCHHHHHH
Confidence 9999877665 3 38888887765555543 466655 666544
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.002 Score=62.13 Aligned_cols=94 Identities=17% Similarity=0.257 Sum_probs=65.7
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC--------CCCCCceEecCCCCCc------H-----------
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG--------VTITPDRLYGLGTGPK------V----------- 192 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g--------l~~~f~~i~g~~~~pk------p----------- 192 (268)
=|.+..+|+ +.|.++.++||.+-.+++.+++..+| |..+||.||....||. |
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 378888888 78999999999999999999995444 4579999996432211 0
Q ss_pred -----------------HHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEe
Q 024375 193 -----------------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 193 -----------------~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~ 237 (268)
--+..+++.+|....+++||||.. .||...+.. .|.+|++|-
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~---~gWrT~~Ii 324 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKR---HGWRTAAII 324 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHH---H-SEEEEE-
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccc---cceEEEEEe
Confidence 124556666788888999999987 699999884 699999994
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.008 Score=54.14 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=51.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhcCCCCCCceEe--cCCC-CC------cHHHHHHHHhc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTITPDRLY--GLGT-GP------KVNVLKQLQKK 201 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~---~~~~~~L~~~~gl~~~f~~i~--g~~~-~p------kp~~l~~~~~~ 201 (268)
..++.||+.++.+ ++|+++.++||.++ +.+.+-|++ .|...+ +.++ +.+. .+ |.+.-.++.++
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 3578899999999 79999999999886 446666775 787654 4343 2211 12 22333333322
Q ss_pred -CCCCCCcEEEEcCcHhhHHHh
Q 024375 202 -PEHQGLRLHFVEDRLATLKNV 222 (268)
Q Consensus 202 -l~~~~~~~~~VGDs~~Di~aa 222 (268)
+.+ +..|||..+|+.+.
T Consensus 221 GYrI----v~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNI----VGIIGDQWNDLKGE 238 (275)
T ss_pred CceE----EEEECCCHHhccCC
Confidence 223 37899999999543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0036 Score=63.28 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=73.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-CCcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
++-||+.+.++ +.|+++.++|.-....+..+.++ .|++.+ +..-. ..|-+.++.+.++ ...+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v----~a~~~PedK~~~v~~lq~~----g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDF----IAEATPEDKIALIRQEQAE----GKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEE----EcCCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67799999999 79999999999999999999996 998643 32221 2466677776544 236899999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
..||.-+-+. |+ +++..|-++....+.+ ++++.+
T Consensus 517 G~NDapAL~~----Ad---vGiAm~~gt~~akeaa----divLld 550 (675)
T TIGR01497 517 GTNDAPALAQ----AD---VGVAMNSGTQAAKEAA----NMVDLD 550 (675)
T ss_pred CcchHHHHHh----CC---EeEEeCCCCHHHHHhC----CEEECC
Confidence 9999999887 44 6677775444323322 466643
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0068 Score=61.31 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=72.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
++-||+.+.++ +.|+++.++|.-....+..+-++ .|++.+|..+ ....|-++++.+.++ .+-+.|+||.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A~~---~PedK~~iV~~lQ~~----G~~VaMtGDG 512 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVAEC---KPEDKINVIREEQAK----GHIVAMTGDG 512 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEcCC---CHHHHHHHHHHHHhC----CCEEEEECCC
Confidence 67899999999 78999999999999999999996 9997544322 111455666655433 2457899999
Q ss_pred HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec
Q 024375 216 LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL 258 (268)
Q Consensus 216 ~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~ 258 (268)
.||.-|=++ |. ||+.-|-++.-..+.+ |.++.
T Consensus 513 vNDAPALa~----AD---VGIAMgsGTdvAkeAA----DiVLl 544 (673)
T PRK14010 513 TNDAPALAE----AN---VGLAMNSGTMSAKEAA----NLIDL 544 (673)
T ss_pred hhhHHHHHh----CC---EEEEeCCCCHHHHHhC----CEEEc
Confidence 999988887 43 7888885544333322 36664
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0065 Score=61.48 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=75.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-CCcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
++-||+.+.++ +.|+++.++|.-....+..+-++ .|++.+ +..-. ..|-+.++.+.++ .+-+.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v----~A~~~PedK~~iV~~lQ~~----G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDF----LAEATPEDKLALIRQEQAE----GRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEE----EccCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67899999998 79999999999999999999996 999653 33221 1466666665543 244789999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHH
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDF 263 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~ 263 (268)
..||.-|=++ |. ||+.-|-++.-..+.+ |+++. +++.+
T Consensus 516 GvNDAPALa~----AD---VGIAMgsGTdvAkeAA----DiVLldd~~s~I 555 (679)
T PRK01122 516 GTNDAPALAQ----AD---VGVAMNSGTQAAKEAG----NMVDLDSNPTKL 555 (679)
T ss_pred CcchHHHHHh----CC---EeEEeCCCCHHHHHhC----CEEEeCCCHHHH
Confidence 9999988887 43 7888885554333332 46665 35544
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0095 Score=53.23 Aligned_cols=121 Identities=19% Similarity=0.269 Sum_probs=81.7
Q ss_pred ccHHHHHHhCCCcEEEEcCCchHHH---HHHHHHhcCCCCCCce-----Ee------c-CC------------CC-CcHH
Q 024375 142 PGVSDALKLASSRIYIVTSNQSRFV---ETLLRELAGVTITPDR-----LY------G-LG------------TG-PKVN 193 (268)
Q Consensus 142 pGv~e~L~~~g~~l~IvTnK~~~~~---~~~L~~~~gl~~~f~~-----i~------g-~~------------~~-pkp~ 193 (268)
|.+.+-|+++|+++..+|..+..+. .+-|++ +|++.--.. .+ . .. .+ +|-+
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~ 165 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGE 165 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHH
Confidence 4444444489999999998776654 445564 777532111 00 1 11 12 7889
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
++..++.+.+..|+.+|||.|+...+....++-...||.++|..|..... ... .+.|.+.-.+....++.
T Consensus 166 ~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~~--~~~-~~~~~~~~~~~~~~~~~ 235 (252)
T PF11019_consen 166 VLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAEE--RPP-DPYPKIAEVQEQQQAKW 235 (252)
T ss_pred HHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchhh--ccC-cccchHHHHHHHHHHHH
Confidence 99999999999999999999999998877666666999999999986432 111 44555554444444443
|
The function is not known. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0022 Score=54.62 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=36.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+|+..+..++++++++++++++|||+.+|+.+.+. +|+.+
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----~~~~v 202 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV----AGLAV 202 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCCce
Confidence 89999999999999999999999999999999998 55543
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.012 Score=45.04 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=47.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
...++||+.|+|+ ++|+++.++||.+... ..+.|++ +|+..-.+.|+.+ .......+++. ....++.
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~ts-----~~~~~~~l~~~-~~~~~v~ 84 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIITS-----GMAAAEYLKEH-KGGKKVY 84 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEEH-----HHHHHHHHHHH-TTSSEEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEECh-----HHHHHHHHHhc-CCCCEEE
Confidence 3579999999999 7999999999977433 3344464 8887666667653 23444444442 2245677
Q ss_pred EEcCcHhhHHHhhc
Q 024375 211 FVEDRLATLKNVIK 224 (268)
Q Consensus 211 ~VGDs~~Di~aa~~ 224 (268)
+||-. ...+..+.
T Consensus 85 vlG~~-~l~~~l~~ 97 (101)
T PF13344_consen 85 VLGSD-GLREELRE 97 (101)
T ss_dssp EES-H-HHHHHHHH
T ss_pred EEcCH-HHHHHHHH
Confidence 77754 33333343
|
... |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.035 Score=49.94 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=50.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
..++||+.++|+ ++|++++++||.+ .......|++ +|+....+.|+.+ .......+++......++++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts-----~~~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSS-----ALCAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecH-----HHHHHHHHHhhCcCCCEEEE
Confidence 468999999998 7899999999954 4444456775 8887555666543 24555555554344567888
Q ss_pred EcCc
Q 024375 212 VEDR 215 (268)
Q Consensus 212 VGDs 215 (268)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9985
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.033 Score=58.16 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=70.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----------------------C-CCc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----------------------T-GPK 191 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----------------------~-~pk 191 (268)
.++-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- +.+.|.+ . ..|
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 467899999999 79999999999999999999996 999621 2233322 0 123
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
-+++..+. +. .+.+.|+||+.||.-|=++ |+ ||+.-|-++. ..... -|+++.+
T Consensus 592 ~~iV~~lq-~~---G~vVam~GDGvNDapALk~----Ad---VGIAmg~gtd--vAk~a--ADiVLld 644 (867)
T TIGR01524 592 SRIIGLLK-KA---GHTVGFLGDGINDAPALRK----AD---VGISVDTAAD--IAKEA--SDIILLE 644 (867)
T ss_pred HHHHHHHH-hC---CCEEEEECCCcccHHHHHh----CC---EEEEeCCccH--HHHHh--CCEEEec
Confidence 34444433 22 3468899999999999887 44 6666673332 32222 2477644
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.046 Score=57.58 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=76.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc-----------------------eEecCCC-CC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGT-GP 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~-----------------------~i~g~~~-~p 190 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+...-. .|++.-. ..
T Consensus 578 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 378899999999 79999999999999999999996 99963211 1222111 13
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhh
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCT 265 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~ 265 (268)
|-+++..+.+ .| +-+.|+||+.||.-|=++ |. ||+.-|-...+ .... ..|+++. +++.+..
T Consensus 657 K~~iV~~lq~-~g---~vVam~GDGvNDapALk~----Ad---VGIAmg~~gtd-vAk~--aADivL~dd~f~~I~~ 719 (941)
T TIGR01517 657 KQLLVLMLKD-MG---EVVAVTGDGTNDAPALKL----AD---VGFSMGISGTE-VAKE--ASDIILLDDNFASIVR 719 (941)
T ss_pred HHHHHHHHHH-CC---CEEEEECCCCchHHHHHh----CC---cceecCCCccH-HHHH--hCCEEEecCCHHHHHH
Confidence 4455555443 23 458999999999999887 43 66766733222 2222 2468887 5665543
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.044 Score=58.37 Aligned_cols=112 Identities=13% Similarity=0.170 Sum_probs=74.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC----------CceEe-cCC----------------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT----------PDRLY-GLG---------------- 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~----------f~~i~-g~~---------------- 187 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+... -..++ |.+
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 377899999999 89999999999999999999996 999532 11222 221
Q ss_pred ------C-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC-
Q 024375 188 ------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ- 259 (268)
Q Consensus 188 ------~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~- 259 (268)
. ..|-+++..+.+ . .+.+.|+||+.||.-|=+. |+ ||+.-|....+--+++ -|+++.+
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~-~---g~~Vam~GDGvNDapaLk~----Ad---VGIAmg~~gt~vak~a---ADivl~dd 789 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHR-R---KAFCAMTGDGVNDSPSLKM----AN---VGIAMGINGSDVAKDA---SDIVLSDD 789 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHh-c---CCeeEEeCCCcchHHHHHh----CC---ccEecCCCccHHHHHh---cCEEEecC
Confidence 0 023344444333 2 3458899999999999887 43 6666675443332322 3577755
Q ss_pred -hhHHh
Q 024375 260 -LSDFC 264 (268)
Q Consensus 260 -~~~~~ 264 (268)
.+.+.
T Consensus 790 ~f~~I~ 795 (1053)
T TIGR01523 790 NFASIL 795 (1053)
T ss_pred CHHHHH
Confidence 55553
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.0046 Score=54.69 Aligned_cols=40 Identities=18% Similarity=0.047 Sum_probs=32.9
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcC----cHhhHHHhhccCccCCCcEEEEe
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGD----s~~Di~aa~~~~~~agi~~i~v~ 237 (268)
.|...+..+++. +++++.||| +.||+.+=+. ++...++|.
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~----~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYND----PRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhc----CCCceEEeC
Confidence 788999999887 589999999 8999999886 455455554
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.043 Score=56.42 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=69.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC---ce-----------------------EecCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGT 188 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f---~~-----------------------i~g~~~ 188 (268)
.++-|++.++++ +.|+++.++|+-....+..+-++ .|+.... +. +++.-.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~ 519 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVF 519 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecC
Confidence 478899999999 79999999999999999999996 9996410 00 121111
Q ss_pred C-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 189 G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 189 ~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
. .|.++++.+. + ..+-+.|+||+.||.-|=++ |. ||+.-|-++. ..... -|+++.+
T Consensus 520 Pe~K~~iV~~lq-~---~G~~VamvGDGvNDapAL~~----Ad---VGIAm~~gtd--vAkea--ADivLl~ 576 (755)
T TIGR01647 520 PEHKYEIVEILQ-K---RGHLVGMTGDGVNDAPALKK----AD---VGIAVAGATD--AARSA--ADIVLTE 576 (755)
T ss_pred HHHHHHHHHHHH-h---cCCEEEEEcCCcccHHHHHh----CC---eeEEecCCcH--HHHHh--CCEEEEc
Confidence 1 3444444433 2 23458999999999988887 44 5555563332 32222 3466654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.046 Score=57.33 Aligned_cols=105 Identities=20% Similarity=0.251 Sum_probs=70.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----------------------CC-Cc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----------------------TG-PK 191 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----------------------~~-pk 191 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+..- ..+-|.+ .. .|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 367899999999 79999999999999999999996 999521 2222222 10 23
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
-.++..+.+ ..+-+.|+||+.||.-|=++ |. ||+.-|-++. .....+ |+++.+
T Consensus 627 ~~iV~~Lq~----~G~vVamtGDGvNDaPALk~----AD---VGIAmg~gtd--vAkeaA--DiVLld 679 (903)
T PRK15122 627 SRVLKALQA----NGHTVGFLGDGINDAPALRD----AD---VGISVDSGAD--IAKESA--DIILLE 679 (903)
T ss_pred HHHHHHHHh----CCCEEEEECCCchhHHHHHh----CC---EEEEeCcccH--HHHHhc--CEEEec
Confidence 344444432 23458999999999998887 43 6666673332 322222 477743
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.048 Score=57.15 Aligned_cols=105 Identities=19% Similarity=0.215 Sum_probs=70.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----------------------CC-Cc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----------------------TG-PK 191 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----------------------~~-pk 191 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+..- ..+.|.+ .. .|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~-~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAG-EVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCcc-CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 367799999998 79999999999999999999996 999521 2222322 00 23
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 192 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 192 p~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
-+++..+. +. .+-+.|+||+.||.-|=++ |. ||+.-|-++. .....+ |+++.+
T Consensus 627 ~~IV~~Lq-~~---G~vVam~GDGvNDaPALk~----AD---VGIAmg~gtd--vAkeaA--DiVLld 679 (902)
T PRK10517 627 ERIVTLLK-RE---GHVVGFMGDGINDAPALRA----AD---IGISVDGAVD--IAREAA--DIILLE 679 (902)
T ss_pred HHHHHHHH-HC---CCEEEEECCCcchHHHHHh----CC---EEEEeCCcCH--HHHHhC--CEEEec
Confidence 34444433 22 3458899999999998887 43 6777774432 332222 477754
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.033 Score=47.17 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=64.7
Q ss_pred cccccCCCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhcCCCCCCceEecCCCCCcHHHH--HHHHhcCC
Q 024375 132 TTWIGANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTGPKVNVL--KQLQKKPE 203 (268)
Q Consensus 132 ~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~---~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l--~~~~~~l~ 203 (268)
.+|...+-|..=+++++. ++|-.++.+|+...- .+-+.|...|.|+..-.+++.++ +|||.-. ...+...+
T Consensus 107 ~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~~~ 185 (237)
T COG3700 107 NGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-KPKPGQYTKTQWIQDKN 185 (237)
T ss_pred cCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-CCCcccccccHHHHhcC
Confidence 467777778787888888 799999999976543 33344444588887777777555 3343322 12334445
Q ss_pred CCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 204 ~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
+. ++-|||.+||.||+++|+. ||+..
T Consensus 186 ~~----IhYGDSD~Di~AAkeaG~R-gIRil 211 (237)
T COG3700 186 IR----IHYGDSDNDITAAKEAGAR-GIRIL 211 (237)
T ss_pred ce----EEecCCchhhhHHHhcCcc-ceeEE
Confidence 54 8999999999999995442 44433
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.061 Score=46.93 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=21.0
Q ss_pred CCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec
Q 024375 151 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 151 ~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g 185 (268)
+|++++|+|+++...+..+++. +++.. ++.++|
T Consensus 29 ~gi~~viaTGR~~~~v~~~~~~-l~l~~-~~~~I~ 61 (236)
T TIGR02471 29 DAVGFGIATGRSVESAKSRYAK-LNLPS-PDVLIA 61 (236)
T ss_pred CCceEEEEeCCCHHHHHHHHHh-CCCCC-CCEEEE
Confidence 5667777777777777777775 66642 344444
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.14 Score=52.90 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=75.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
.+-|++..++. +.|++++++|+-....++.+-++ .| ++.|++.-.. .|.+.+.++.++- ..+.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~----~~VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNG----GPVAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcC----CcEEEEeC
Confidence 56688777776 89999999999999999999997 88 5677764432 6788888877653 45799999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
..||--|=.. | .+|+.=|-++.-..+.+ |+++..-
T Consensus 794 GINDaPALA~----A---dVGIaig~gs~vAieaA----DIVLmrn 828 (951)
T KOG0207|consen 794 GINDAPALAQ----A---DVGIAIGAGSDVAIEAA----DIVLMRN 828 (951)
T ss_pred CCCccHHHHh----h---ccceeeccccHHHHhhC----CEEEEcc
Confidence 9999765443 2 37777787765444433 4666543
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.011 Score=48.42 Aligned_cols=80 Identities=16% Similarity=0.074 Sum_probs=56.3
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCC-CCCCceEecCCCC---CcHHHHHHHHhcCCCCCCcEEEE
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl-~~~f~~i~g~~~~---pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
.+-||+.++|+ .+.+.++|.|+..+.+++.+++. +.- ..+|+.++..+.. .+.. .+-++.++-+.+++|+|
T Consensus 36 ~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~--~KdL~~l~~~~~~vviv 112 (159)
T PF03031_consen 36 KLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY--IKDLSKLGRDLDNVVIV 112 (159)
T ss_dssp EE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE--E--GGGSSS-GGGEEEE
T ss_pred eeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc--ccchHHHhhccccEEEE
Confidence 45699999999 78899999999999999999996 876 4678888865421 1111 14566677778899999
Q ss_pred cCcHhhHHH
Q 024375 213 EDRLATLKN 221 (268)
Q Consensus 213 GDs~~Di~a 221 (268)
.|++.-...
T Consensus 113 DD~~~~~~~ 121 (159)
T PF03031_consen 113 DDSPRKWAL 121 (159)
T ss_dssp ES-GGGGTT
T ss_pred eCCHHHeec
Confidence 999886543
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.41 Score=46.72 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~ 187 (268)
|+..+++++...++...|... -+-|...+...++| +.+|+|..|+..++..++.++|. |.|+|.+
T Consensus 75 Gl~~~die~vaRavlpkf~~~---------dv~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTE 139 (498)
T PLN02499 75 GVHESEIESVARAVLPKFYMD---------DVDMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSE 139 (498)
T ss_pred CCCHHHHHHHHHHHhhHHHHh---------hCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeee
Confidence 677777766666666553221 12344555555677 99999999999999999965675 5666654
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.19 Score=53.31 Aligned_cols=112 Identities=14% Similarity=0.189 Sum_probs=72.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC------------------------ceEe-cCC--
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------DRLY-GLG-- 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f------------------------~~i~-g~~-- 187 (268)
.+|-|++.++++ ++|+++.++|+-....+..+.++ .|+..-- ..++ |.+
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~ 645 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh
Confidence 367899999999 79999999999999999999996 9984210 1222 221
Q ss_pred ----------------------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 188 ----------------------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 188 ----------------------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
.. .|-.++.. +++.| +-+.|+||+.||+-|=+. |+ ||+.-|....+
T Consensus 646 ~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~-lq~~g---~vv~~~GDG~ND~paLk~----Ad---VGiamg~~G~~ 714 (997)
T TIGR01106 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEG-CQRQG---AIVAVTGDGVNDSPALKK----AD---IGVAMGIAGSD 714 (997)
T ss_pred hCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHH-HHHCC---CEEEEECCCcccHHHHhh----CC---cceecCCcccH
Confidence 00 12233333 33333 358899999999999887 43 66776754333
Q ss_pred HHHhcCCCCCeeecC--hhHHh
Q 024375 245 ERAEAASMPRIQLLQ--LSDFC 264 (268)
Q Consensus 245 el~~~~~~P~~~~~~--~~~~~ 264 (268)
-.+++ -|+++.+ .+.+.
T Consensus 715 vak~a---ADivL~dd~f~~Iv 733 (997)
T TIGR01106 715 VSKQA---ADMILLDDNFASIV 733 (997)
T ss_pred HHHHh---hceEEecCCHHHHH
Confidence 23332 2577766 44443
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.14 Score=54.61 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=34.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
.+|-|||.++++ ++|+++.++|+-..+.|..+-++ .|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 478899999999 89999999999999999999875 7764
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.089 Score=44.06 Aligned_cols=87 Identities=21% Similarity=0.220 Sum_probs=58.0
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCC-CCCCceE--ecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcH
Q 024375 142 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRL--YGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 216 (268)
Q Consensus 142 pGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl-~~~f~~i--~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~ 216 (268)
.+|...|. ++..+++-+|+....+.+..=.- +.. ...++.+ +|.. .|.+ +.+.++++ +|+.|+.
T Consensus 75 q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h--~KV~----~vrth~id----lf~ed~~ 143 (194)
T COG5663 75 QLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLH--HKVE----AVRTHNID----LFFEDSH 143 (194)
T ss_pred HHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhccc--ccch----hhHhhccC----ccccccC
Confidence 56778887 77888999999998887665442 222 1234443 3432 2322 45566777 9999997
Q ss_pred hh-HHHhhccCccCCCcEEEEecCCCCH
Q 024375 217 AT-LKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 217 ~D-i~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
-. ++.|++ +|+|++....-|+..
T Consensus 144 ~na~~iAk~----~~~~vilins~ynRk 167 (194)
T COG5663 144 DNAGQIAKN----AGIPVILINSPYNRK 167 (194)
T ss_pred chHHHHHHh----cCCcEEEecCccccc
Confidence 54 455565 899999998887653
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.033 Score=47.79 Aligned_cols=52 Identities=21% Similarity=0.134 Sum_probs=41.4
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
.|...+..+++.+|+++++++.|||+.+|+.+-+. +| .++.=|... +++++.
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~----~~---~~~am~na~-~~~k~~ 237 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL----AG---YSVAMGNAT-PELKKA 237 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH----SS---EEEEETTS--HHHHHH
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHHhh----cC---eEEEEcCCC-HHHHHh
Confidence 89999999999999999999999999999999998 44 334445444 455554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.024 Score=45.32 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=12.9
Q ss_pred CcEEEEecCcccccC
Q 024375 2 EDLYALDFDGVICDS 16 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (268)
-|+|+||+||||+++
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 079999999999975
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.2 Score=44.34 Aligned_cols=82 Identities=15% Similarity=0.217 Sum_probs=57.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH----HHHHHHHhcCCCCCC-ceEe-cCCCCCcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF----VETLLRELAGVTITP-DRLY-GLGTGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~----~~~~L~~~~gl~~~f-~~i~-g~~~~pkp~~l~~~~~~l~~~~~ 207 (268)
..++-||+.|+|. ++|.++.-+||..++. +..-|++ +|+...- +.++ =.+.++|..-...+-+.+.
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~---- 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYK---- 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccc----
Confidence 3678899999999 8999999999988776 6777886 8886432 2222 2233366655555544333
Q ss_pred cEEEEcCcHhhHHHhh
Q 024375 208 RLHFVEDRLATLKNVI 223 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~ 223 (268)
-+++|||...|.....
T Consensus 195 iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 195 IVMLVGDNLDDFGDNA 210 (274)
T ss_pred eeeEecCchhhhcchh
Confidence 3689999999985543
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.15 Score=45.99 Aligned_cols=52 Identities=37% Similarity=0.562 Sum_probs=38.4
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHhcCCCCCCceEecCC
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG 187 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~---~~L~~~~gl~~~f~~i~g~~ 187 (268)
....+|||+.+.|+ ++|+++.++||.+....+ +-|+.+.+++-..+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 34689999999999 899999999998766444 33332256666677888653
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.19 Score=48.94 Aligned_cols=75 Identities=17% Similarity=0.268 Sum_probs=58.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
..+.|++.++++ ++|+++.++|......+..+-++ .|+ ++.- ..-|.+.+..+.++ | ..+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~~-g---~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQKK-G---RVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHHC-C---CEEEEEC
Confidence 478999999999 79999999999999999999996 886 2211 11455666665332 2 5689999
Q ss_pred CcHhhHHHhhc
Q 024375 214 DRLATLKNVIK 224 (268)
Q Consensus 214 Ds~~Di~aa~~ 224 (268)
|..+|.-+-+.
T Consensus 414 Dg~nD~~al~~ 424 (499)
T TIGR01494 414 DGVNDAPALKK 424 (499)
T ss_pred CChhhHHHHHh
Confidence 99999988876
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.07 Score=42.38 Aligned_cols=14 Identities=14% Similarity=0.422 Sum_probs=13.1
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.034 Score=47.71 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=19.6
Q ss_pred EEEecCcccccChhHHHHHHHHHHHHh
Q 024375 5 YALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
|+|||||||+++-..+-.....+++.+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l 27 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKEL 27 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHH
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhh
Confidence 689999999998765555555555554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.46 Score=41.78 Aligned_cols=103 Identities=18% Similarity=0.194 Sum_probs=73.3
Q ss_pred hhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC-------CCCCCceEecCCCCCcHHHH
Q 024375 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVL 195 (268)
Q Consensus 126 ~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g-------l~~~f~~i~g~~~~pkp~~l 195 (268)
|.+-|..+-+. ...||.|...++ .+|++++|-|+-+...-+.+.. |-+ ++.|||.-+|. |..-..+
T Consensus 111 w~~gy~sg~lk-~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg-~s~~gdl~~y~~gyfDt~iG~--K~e~~sy 186 (254)
T KOG2630|consen 111 WAAGYESGELK-AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFG-YSDAGDLRKYISGYFDTTIGL--KVESQSY 186 (254)
T ss_pred HHhhccccccc-ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHc-ccCcchHHHHhhhhhhccccc--eehhHHH
Confidence 44555544443 489999999999 7999999988777665444443 222 23466665542 2334678
Q ss_pred HHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 196 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 196 ~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
.++.+.+|.++.+.+|.=|-..-..+|+. +|+.+..+
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~----aGl~a~l~ 223 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARK----AGLQAGLV 223 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHh----cccceeee
Confidence 88999999999999999999999999998 55554444
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.045 Score=46.42 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=18.8
Q ss_pred EEEEecCcccccCh-hHHHHHHHHHHHHh
Q 024375 4 LYALDFDGVICDSC-EETALSAVKAARVR 31 (268)
Q Consensus 4 ~vlFDlDGTLvDS~-~~i~~s~~~a~~~~ 31 (268)
+|+||+||||+++- ..+...+..+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l 29 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERL 29 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHH
Confidence 58999999999875 33444444555554
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.07 Score=49.17 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=22.2
Q ss_pred EEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
+++||+||||+++..- +..+..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 6899999999999886 56666677777
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.048 Score=41.78 Aligned_cols=15 Identities=33% Similarity=0.472 Sum_probs=13.4
Q ss_pred EEEEecCcccccChh
Q 024375 4 LYALDFDGVICDSCE 18 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~ 18 (268)
+++||+||||+.+-+
T Consensus 1 ~~vfD~D~tl~~~~~ 15 (139)
T cd01427 1 AVLFDLDGTLLDSEP 15 (139)
T ss_pred CeEEccCCceEccCc
Confidence 489999999999986
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=92.56 E-value=1.8 Score=38.47 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEecCCCC-CcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~g~~~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.-.|+|.+.++++ ++|+.+.-+++.....++++.+ +|-+...- .-||+..+ .+|+.+..+.+..+++
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp-- 177 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP-- 177 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc--
Confidence 3468999999999 5799888677777788888877 67653322 45565544 5799999888765554
Q ss_pred cEEEEcC---cHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 208 RLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 208 ~~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
|++|= ++.|+..|.+ .|+..+.|.++...
T Consensus 178 --VI~egGI~tpeda~~Ame----lGAdgVlV~SAIt~ 209 (248)
T cd04728 178 --VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAK 209 (248)
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhcC
Confidence 77764 5788888887 79999999999875
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.24 Score=44.35 Aligned_cols=67 Identities=18% Similarity=0.131 Sum_probs=47.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.|-..+.++++.+++..++++++||..+|+.+=+.+.. -+-.+|+| |-.. ..-++.+.+|+++...|
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~-~~g~~vav--g~a~--------~~A~~~l~~~~~v~~~L 240 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNR-LGGISVKV--GTGA--------TQASWRLAGVPDVWSWL 240 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHh-cCCeEEEE--CCCC--------CcCeEeCCCHHHHHHHH
Confidence 78899999999999999999999999999887664200 12234555 4222 12357888888886655
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.093 Score=47.88 Aligned_cols=29 Identities=10% Similarity=0.102 Sum_probs=21.9
Q ss_pred cEEEEecCcccccChhHH---HHHHHHHHHHh
Q 024375 3 DLYALDFDGVICDSCEET---ALSAVKAARVR 31 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i---~~s~~~a~~~~ 31 (268)
++|+|||||||++.-..+ -..+..+++++
T Consensus 127 kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 127 HVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred eEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 799999999999996543 25565666666
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.45 Score=51.39 Aligned_cols=34 Identities=18% Similarity=0.408 Sum_probs=28.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~ 171 (268)
.+|=||+.++++ ++|+++.++|+-..+.+..+-.
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 478899999999 7999999999977777776654
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.26 Score=44.08 Aligned_cols=47 Identities=26% Similarity=0.126 Sum_probs=39.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~ 186 (268)
..+|++.++|+ ++|++++|+|+++...+..++++ +|+..++-...|+
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~~nGa 70 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIVENGA 70 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEEEcCc
Confidence 56788899988 79999999999999999999996 9988765444443
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.066 Score=43.75 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.6
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
|+++|||||||+++..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999999876
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.9 Score=40.11 Aligned_cols=59 Identities=12% Similarity=0.262 Sum_probs=42.6
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCC
Q 024375 102 PVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV 176 (268)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl 176 (268)
..|+-..|++.+++.+.-+ ...++-||+.++++ ++-.+=.|+|+.-+.+++++.. +.|+
T Consensus 61 vPFL~ahGVt~~dlrr~sE---------------~sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~ 121 (315)
T COG4030 61 VPFLAAHGVTNRDLRRISE---------------LSAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGV 121 (315)
T ss_pred HHHHHHhcCcHHHHHHHHH---------------hhcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCC
Confidence 3455556777666433311 12478899999999 6667788999999999999988 5777
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.08 Score=44.68 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.7
Q ss_pred CcEEEEecCcccccC
Q 024375 2 EDLYALDFDGVICDS 16 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (268)
.++|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 479999999999996
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.12 Score=47.18 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=21.4
Q ss_pred CcEEEEecCcccccChhHH---HHHHHHHHHHh
Q 024375 2 EDLYALDFDGVICDSCEET---ALSAVKAARVR 31 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i---~~s~~~a~~~~ 31 (268)
.++|+||+||||+++-..+ -..+-.+++++
T Consensus 128 ~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eL 160 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPVRIRDPFVYDSLDEL 160 (303)
T ss_pred ccEEEEecCCCccCCCCccccCChhHHHHHHHH
Confidence 3799999999999996654 34444455555
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.33 Score=42.99 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=40.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHhcCCCCCCceEecC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTn---K~~~~~~~~L~~~~gl~~~f~~i~g~ 186 (268)
..++||+.++|+ ++|+++.++|| ++...+...|++ +|++...+.|+++
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeH
Confidence 457899999998 79999999998 667888888996 9998777788865
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=91.60 E-value=0.29 Score=46.87 Aligned_cols=52 Identities=15% Similarity=-0.031 Sum_probs=41.9
Q ss_pred CcHHHHHHHHhcC---CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 190 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 190 pkp~~l~~~~~~l---~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
.|-..+..+++.+ |+++++++.+||+.||+++=+. +|+..|+| |-. .+++++
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~----ag~~gvam--~NA-~~elk~ 229 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV----PDVYGVMV--SNA-QEELLQ 229 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc----CCCCEEEE--cCC-cHHHHH
Confidence 7889999999999 9999999999999999999887 66556666 433 344554
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=91.16 E-value=0.12 Score=43.15 Aligned_cols=17 Identities=24% Similarity=0.470 Sum_probs=14.5
Q ss_pred CcEEEEecCcccccChh
Q 024375 2 EDLYALDFDGVICDSCE 18 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~ 18 (268)
.++++||+||||+++-.
T Consensus 13 ~k~~~~D~Dgtl~~~~~ 29 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRS 29 (166)
T ss_pred CcEEEEeCCCceEecCC
Confidence 58999999999998653
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.08 E-value=1 Score=47.52 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=65.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEe-cCC-CC---------------------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-GLG-TG--------------------- 189 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~-g~~-~~--------------------- 189 (268)
.+|-|++.++++ ++|+++.++|+-....|..+-++ .|+..--. .++ |.+ ..
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 478899999999 89999999999999999999996 99865432 243 543 10
Q ss_pred -CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCC
Q 024375 190 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240 (268)
Q Consensus 190 -pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy 240 (268)
.|-.+++ ++++.| .-+.|+||..||+-|=|. |. |||.-|-
T Consensus 625 ~qK~~IV~-~lq~~g---~vVamtGDGvNDapALk~----AD---VGIamg~ 665 (917)
T COG0474 625 EQKARIVE-ALQKSG---HVVAMTGDGVNDAPALKA----AD---VGIAMGG 665 (917)
T ss_pred HHHHHHHH-HHHhCC---CEEEEeCCCchhHHHHHh----cC---ccEEecc
Confidence 1223333 333333 458999999999999888 44 5665554
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.12 Score=42.24 Aligned_cols=14 Identities=50% Similarity=0.805 Sum_probs=12.9
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
++|+||+||||+|.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 78999999999985
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=90.55 E-value=10 Score=33.83 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=71.1
Q ss_pred CCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEecCCCC-CcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~g~~~~-pkp~~l~~~~~~l~~~~~~ 208 (268)
-.++|.+.++++ +.|+.+.-+++.....++++.+ +|-+...- .-||+..+ .+|+.+..+.+..+++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~vp--- 177 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADVP--- 177 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCCe---
Confidence 468999999999 5699888566666777877776 67654322 55665544 5799988888765554
Q ss_pred EEEEcC---cHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 209 LHFVED---RLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 209 ~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
|++|= ++.|+..|.+ .|+..+.|.+|...
T Consensus 178 -VIveaGI~tpeda~~Ame----lGAdgVlV~SAItk 209 (250)
T PRK00208 178 -VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAV 209 (250)
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhhC
Confidence 77774 4678888887 79999999999875
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.54 E-value=0.17 Score=45.43 Aligned_cols=46 Identities=9% Similarity=-0.021 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 164 ~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
..+++++++ +|+..-.-..+| |...+-+++..+-+-.+ -.+-||.+
T Consensus 177 ~al~~ll~~-~~~~~~~v~~~G-D~~nD~~mf~~~~~~~g----~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQE-APFAGRTPVFVG-DDLTDEAGFAVVNRLGG----ISVKVGTG 222 (266)
T ss_pred HHHHHHHHh-cCCCCCeEEEEc-CCccHHHHHHHHHhcCC----eEEEECCC
Confidence 456778884 887643333334 44466777776632112 33677755
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.44 E-value=1.3 Score=47.35 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=31.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGV 176 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl 176 (268)
-+|=.||.|+++ ++|+|+.|.|+-..+.|..+.-. .++
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s-C~L 690 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS-CRL 690 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh-hcC
Confidence 478899999998 89999999999888888777654 444
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=89.76 E-value=0.33 Score=43.25 Aligned_cols=47 Identities=26% Similarity=0.357 Sum_probs=36.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceEecC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i~g~ 186 (268)
.++||+.+.|+ ++|++++++||.+... ....|+. +|++.-.+.|+++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcH
Confidence 37999999998 7999999999966654 6666775 8887555666653
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.84 Score=40.53 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=36.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHhcCCCCCCceEecC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGL 186 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~---L~~~~gl~~~f~~i~g~ 186 (268)
.++||+.++|+ ++|+++.++||.+......+ |+. +|++.-.+.|+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~-~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHhhEecH
Confidence 78999999998 79999999999887655444 443 6776555666654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=88.47 E-value=2.4 Score=45.48 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=35.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478899999999 79999999999999999999996 9984
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.32 E-value=0.24 Score=43.63 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=21.4
Q ss_pred HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHH
Q 024375 164 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQL 198 (268)
Q Consensus 164 ~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~ 198 (268)
..++.++++ +++..-.-..+| |...+.+++..+
T Consensus 170 ~a~~~~~~~-~~~~~~~~i~iG-D~~~D~~~~~~~ 202 (244)
T TIGR00685 170 EIVKRLLWH-QPGSGISPVYLG-DDITDEDAFRVV 202 (244)
T ss_pred HHHHHHHHh-cccCCCceEEEc-CCCcHHHHHHHH
Confidence 567788885 887654344444 445677777766
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=88.25 E-value=0.24 Score=41.07 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=12.0
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
|.+.||+||||+-+-.
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 5789999999998864
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=87.91 E-value=2.9 Score=37.30 Aligned_cols=81 Identities=11% Similarity=0.148 Sum_probs=61.2
Q ss_pred CcEEEEcCCchHHHHHHHHHhcCCCCCC--ceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCC
Q 024375 153 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 153 ~~l~IvTnK~~~~~~~~L~~~~gl~~~f--~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
+.+.|-|+.--+.+-++|- +||+.+| +-|+.+..-.|...++.+.+++|-+...-+.|||+.---++|+. -+
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~----l~ 250 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQA----MN 250 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHh----cC
Confidence 4444444555556666664 7888776 56666554488999999999999988899999999998899998 78
Q ss_pred CcEEEEecC
Q 024375 231 WNLYLVDWG 239 (268)
Q Consensus 231 i~~i~v~wG 239 (268)
+|++=+.-.
T Consensus 251 wPFw~I~~h 259 (274)
T TIGR01658 251 WPFVKIDLH 259 (274)
T ss_pred CCeEEeecC
Confidence 888777543
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=87.87 E-value=2.3 Score=37.26 Aligned_cols=49 Identities=24% Similarity=0.432 Sum_probs=35.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhcCCCCCCceEecC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGL 186 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---~~~~~~~L~~~~gl~~~f~~i~g~ 186 (268)
..+|||+.+.|. ++|+++.++||.+ .....+.|.+++|+..-++.|+.+
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 468999999998 6899999999644 444444444347877666767654
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.79 E-value=1.7 Score=42.67 Aligned_cols=107 Identities=14% Similarity=0.166 Sum_probs=68.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
...||++|-.. +-|++...+|.-.+-.+..+-++ -|++.|... .+|+-=.++.++-+....=+.|.||.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiAe-------atPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIAE-------ATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhhc-------CChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 46799999887 79999999999999999999996 999865432 13432223333333333447899999
Q ss_pred HhhHHHhhccCccCCCcEEEEecCCCCHHHH---HhcCCCCCeeec
Q 024375 216 LATLKNVIKEPELDGWNLYLVDWGYNTPKER---AEAASMPRIQLL 258 (268)
Q Consensus 216 ~~Di~aa~~~~~~agi~~i~v~wGy~~~~el---~~~~~~P~~~~~ 258 (268)
.||.-+-.++ .+- ++..-|-....|- -+...+|.-+++
T Consensus 519 TNDAPALAqA----dVg-~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 519 TNDAPALAQA----DVG-VAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred CCcchhhhhc----chh-hhhccccHHHHHhhcccccCCCccceeh
Confidence 9998765552 211 3444554333332 234556765554
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=86.53 E-value=0.41 Score=38.86 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=14.8
Q ss_pred CcEEEEecCcccccChh
Q 024375 2 EDLYALDFDGVICDSCE 18 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~ 18 (268)
+.++++||||||++|..
T Consensus 2 k~~lvldld~tl~~~~~ 18 (148)
T smart00577 2 KKTLVLDLDETLVHSTH 18 (148)
T ss_pred CcEEEEeCCCCeECCCC
Confidence 36899999999999965
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.53 E-value=0.68 Score=43.26 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=48.6
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcC--CCCCCceEecCCCC-------CcH---------------------------H
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG-------PKV---------------------------N 193 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~g--l~~~f~~i~g~~~~-------pkp---------------------------~ 193 (268)
+.|.+|.++||.|-.++..-+....| |..+||+||-.-.| .+| -
T Consensus 254 ~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G 333 (510)
T KOG2470|consen 254 DHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQG 333 (510)
T ss_pred HhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeec
Confidence 68999999999999999988873123 45789998853211 112 1
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHhh
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLAT 218 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~D 218 (268)
-+...++-.|....+++|+||..+-
T Consensus 334 ~l~~flelt~WrG~~VlYFGDHlyS 358 (510)
T KOG2470|consen 334 NLKSFLELTGWRGPRVLYFGDHLYS 358 (510)
T ss_pred cHHHHHHHhccCCCeeEEecCcchh
Confidence 2445555556777899999999753
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=86.34 E-value=1.5 Score=39.30 Aligned_cols=76 Identities=26% Similarity=0.257 Sum_probs=50.4
Q ss_pred CCCcEEEEcCCchHHHHHH---HHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCc
Q 024375 151 ASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 151 ~g~~l~IvTnK~~~~~~~~---L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~ 227 (268)
.-++++|||..+...-+++ |+. .|+..--....|+- +|..++..+ + |+ +|+.|....++.|..
T Consensus 185 ~piRtalVTAR~apah~RvI~TLr~-Wgv~vDEafFLgG~--~K~~vL~~~----~--ph--IFFDDQ~~H~~~a~~--- 250 (264)
T PF06189_consen 185 SPIRTALVTARSAPAHERVIRTLRS-WGVRVDEAFFLGGL--PKGPVLKAF----R--PH--IFFDDQDGHLESASK--- 250 (264)
T ss_pred CceEEEEEEcCCCchhHHHHHHHHH-cCCcHhHHHHhCCC--chhHHHHhh----C--CC--EeecCchhhhhHhhc---
Confidence 5688999997766554444 553 56542211222322 565555443 2 33 999999999999984
Q ss_pred cCCCcEEEEecCCCC
Q 024375 228 LDGWNLYLVDWGYNT 242 (268)
Q Consensus 228 ~agi~~i~v~wGy~~ 242 (268)
++|++-|.||-.+
T Consensus 251 --~vps~hVP~gv~n 263 (264)
T PF06189_consen 251 --VVPSGHVPYGVAN 263 (264)
T ss_pred --CCCEEeccCCcCC
Confidence 8999999999653
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=85.90 E-value=0.4 Score=36.51 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=14.4
Q ss_pred EEEecCcccccChhHHHHH
Q 024375 5 YALDFDGVICDSCEETALS 23 (268)
Q Consensus 5 vlFDlDGTLvDS~~~i~~s 23 (268)
++||+||||.+.-..+-.|
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 6899999999977654444
|
... |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=85.65 E-value=3.1 Score=35.75 Aligned_cols=91 Identities=15% Similarity=0.137 Sum_probs=58.8
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCC----CceEecCC---------CCCc-HHHHHHHHhcCCC-
Q 024375 142 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTIT----PDRLYGLG---------TGPK-VNVLKQLQKKPEH- 204 (268)
Q Consensus 142 pGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~----f~~i~g~~---------~~pk-p~~l~~~~~~l~~- 204 (268)
||+.++|+ .+.+.++|-|+.....++.++.. +|+... ...+.... .++. -..+..+.++++.
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~ 126 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEF 126 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccC
Confidence 89999999 78999999999999999999995 876321 11122111 1110 1123334344542
Q ss_pred -CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 205 -QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 205 -~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
+.+++++|.|++.-...-=. +|+++- .|-
T Consensus 127 ~~~~ntiiVDd~p~~~~~~P~----N~i~I~--~f~ 156 (195)
T TIGR02245 127 YSMKNTIMFDDLRRNFLMNPQ----NGLKIR--PFK 156 (195)
T ss_pred CCcccEEEEeCCHHHHhcCCC----CccccC--Ccc
Confidence 67899999999887653222 466664 453
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.51 E-value=2.8 Score=43.41 Aligned_cols=99 Identities=20% Similarity=0.289 Sum_probs=69.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc----eEe-cCCC-------------------C--
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----RLY-GLGT-------------------G-- 189 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~----~i~-g~~~-------------------~-- 189 (268)
+|=|+|.+.++ +.|+++-++|+-....++.+.++ .|+-..-+ ..+ |.+- +
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 67789999888 89999999999999999999996 99865444 222 2220 0
Q ss_pred --CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 190 --PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 190 --pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
+|-++++.+ + -..+=+.|-||..||.-|-|.| . ||+.-|-...+--+++
T Consensus 663 P~HK~kIVeaL-q---~~geivAMTGDGVNDApALK~A----d---IGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 663 PQHKLKIVEAL-Q---SRGEVVAMTGDGVNDAPALKKA----D---IGIAMGISGTDVAKEA 713 (972)
T ss_pred chhHHHHHHHH-H---hcCCEEEecCCCccchhhhhhc----c---cceeecCCccHhhHhh
Confidence 223334333 3 2334478999999999998883 2 8888895544444443
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=85.43 E-value=0.47 Score=39.85 Aligned_cols=16 Identities=19% Similarity=0.270 Sum_probs=11.4
Q ss_pred CcEEEEecCcccccCh
Q 024375 2 EDLYALDFDGVICDSC 17 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (268)
.++|+||||+||-+--
T Consensus 3 PklvvFDLD~TlW~~~ 18 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPW 18 (169)
T ss_dssp -SEEEE-STTTSSSS-
T ss_pred CcEEEEcCcCCCCchh
Confidence 3799999999997643
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=85.09 E-value=0.44 Score=39.96 Aligned_cols=15 Identities=47% Similarity=0.689 Sum_probs=13.7
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
++++||+||||-|..
T Consensus 8 ~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 8 KLVILDVDGVMTDGR 22 (169)
T ss_pred eEEEEeCceeeECCe
Confidence 699999999999974
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=83.10 E-value=11 Score=33.60 Aligned_cols=151 Identities=19% Similarity=0.195 Sum_probs=79.0
Q ss_pred hhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 024375 95 ENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (268)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~ 171 (268)
..|-.....++-..+++.+++.+.+... ...+=+|+.++++ ++++|+.|.|.--...++.+|+
T Consensus 60 ~EWw~kah~llv~~~l~k~~i~~~V~~s--------------~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~ 125 (246)
T PF05822_consen 60 EEWWTKAHELLVEQGLTKSEIEEAVKES--------------DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLR 125 (246)
T ss_dssp HHHHHHHHHHHHHHT-BGGGHHHHHHCS-----------------B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHhc--------------chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHH
Confidence 3343444555566677766666665521 2456688998888 8999999999999999999999
Q ss_pred HhcCCCCC----------C---ceEecC-CC----CCcHHHHHH---HHhcCCCCCCcEEEEcCcHhhHHHhhccCccCC
Q 024375 172 ELAGVTIT----------P---DRLYGL-GT----GPKVNVLKQ---LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 172 ~~~gl~~~----------f---~~i~g~-~~----~pkp~~l~~---~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
+ .|.... | ..+.|- +. -.|-+.... ..+++ -...+++..|||..|+.+|.... ..
T Consensus 126 q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~~--~~ 201 (246)
T PF05822_consen 126 Q-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGVP--DE 201 (246)
T ss_dssp H-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-S----
T ss_pred H-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccCchHHHHh-ccCCcEEEecCccCChHhhcCCC--cc
Confidence 7 665321 1 123331 10 033332221 12222 23568999999999999987531 11
Q ss_pred CcEEEEecCCCCHHH-HHhcCCCCCeeecChhHH
Q 024375 231 WNLYLVDWGYNTPKE-RAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 231 i~~i~v~wGy~~~~e-l~~~~~~P~~~~~~~~~~ 263 (268)
-.++-+.+=....++ +..+...=|+++.+=+.+
T Consensus 202 ~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm 235 (246)
T PF05822_consen 202 ENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTM 235 (246)
T ss_dssp SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-
T ss_pred ccEEEEEecccCHHHHHHHHHhcCCEEEECCCCc
Confidence 122223222234443 555554557777665544
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=82.66 E-value=0.84 Score=43.01 Aligned_cols=70 Identities=13% Similarity=-0.038 Sum_probs=42.7
Q ss_pred CcHHHHHHHHhcCCCCC---CcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 190 PKVNVLKQLQKKPEHQG---LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~---~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
.|-..++.+++.++... .-.+||||-.+|-.+=+.......--.|.| |-...+ ..-+|.+.+++++...
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V--G~~~k~------T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV--SKFPKD------TDASYSLQDPSEVMDF 354 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE--CCCCCC------CcceEeCCCHHHHHHH
Confidence 57789999999887653 247999999999666443210010122334 422111 1234888999988766
Q ss_pred c
Q 024375 267 L 267 (268)
Q Consensus 267 ~ 267 (268)
|
T Consensus 355 L 355 (366)
T PLN03017 355 L 355 (366)
T ss_pred H
Confidence 5
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=82.47 E-value=0.73 Score=39.62 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=13.5
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
++++.||||||+|+.
T Consensus 22 klLVLDLDeTLvh~~ 36 (195)
T TIGR02245 22 KLLVLDIDYTLFDHR 36 (195)
T ss_pred cEEEEeCCCceEccc
Confidence 699999999999864
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=82.01 E-value=0.9 Score=42.62 Aligned_cols=69 Identities=13% Similarity=0.013 Sum_probs=42.0
Q ss_pred CcHHHHHHHHhcCCCCCC---cEEEEcCcHhhHHHhhccCc-cCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 190 PKVNVLKQLQKKPEHQGL---RLHFVEDRLATLKNVIKEPE-LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~---~~~~VGDs~~Di~aa~~~~~-~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
.|-..+..+++.++.... -.+||||-.+|-.+=+.... ..|+ .|.| |.+.. ...-+|.+.+++++..
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~V--g~~~k------~T~A~y~L~dp~eV~~ 339 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILV--SKYAK------ETNASYSLQEPDEVME 339 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEe--ccCCC------CCcceEeCCCHHHHHH
Confidence 577889999998875432 27999999999666443110 0132 2233 32211 1123588999998876
Q ss_pred hc
Q 024375 266 KL 267 (268)
Q Consensus 266 ~~ 267 (268)
.|
T Consensus 340 ~L 341 (354)
T PLN02151 340 FL 341 (354)
T ss_pred HH
Confidence 55
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.93 E-value=0.79 Score=38.10 Aligned_cols=18 Identities=39% Similarity=0.447 Sum_probs=15.4
Q ss_pred CCcEEEEecCcccccChh
Q 024375 1 MEDLYALDFDGVICDSCE 18 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~ 18 (268)
|.++++||.||||.|..-
T Consensus 7 ~IkLli~DVDGvLTDG~l 24 (170)
T COG1778 7 NIKLLILDVDGVLTDGKL 24 (170)
T ss_pred hceEEEEeccceeecCeE
Confidence 458999999999999863
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=81.40 E-value=0.79 Score=38.12 Aligned_cols=14 Identities=36% Similarity=0.287 Sum_probs=12.1
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
++++||.||||+..
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (176)
T TIGR00213 2 KAIFLDRDGTINID 15 (176)
T ss_pred CEEEEeCCCCEeCC
Confidence 68999999999953
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.36 E-value=0.81 Score=41.27 Aligned_cols=99 Identities=15% Similarity=0.081 Sum_probs=53.9
Q ss_pred CCCccHHHHHHhCCCcEEEEcCC--chHHHHHHHHH-hcCCCCC-CceEecCC------CC-CcHHHHHHHHhcCCCCCC
Q 024375 139 RLYPGVSDALKLASSRIYIVTSN--QSRFVETLLRE-LAGVTIT-PDRLYGLG------TG-PKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 139 ~lypGv~e~L~~~g~~l~IvTnK--~~~~~~~~L~~-~~gl~~~-f~~i~g~~------~~-pkp~~l~~~~~~l~~~~~ 207 (268)
.-+||+. ++.+|.-+++-+-+ +.+.....+.. ...+... .....|.. .+ .|-..+..+++++.....
T Consensus 122 ~r~pGs~--iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~ 199 (266)
T COG1877 122 ERTPGSY--IERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDGR 199 (266)
T ss_pred hcCCCeE--EEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCCC
Confidence 4467643 23577777776632 22222222221 1233323 23333543 12 688889999988776665
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
-.++.||-..|=.+=... .+...+.|.=|.++
T Consensus 200 ~~~~aGDD~TDE~~F~~v---~~~~~~~v~v~~~~ 231 (266)
T COG1877 200 FPIFAGDDLTDEDAFAAV---NKLDSITVKVGVGS 231 (266)
T ss_pred cceecCCCCccHHHHHhh---ccCCCceEEecCCc
Confidence 689999999986543331 33334555555553
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.10 E-value=3.2 Score=39.50 Aligned_cols=84 Identities=14% Similarity=0.163 Sum_probs=58.5
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcC--CCCCCceEecCCCC----------------------------------CcHH
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG----------------------------------PKVN 193 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~g--l~~~f~~i~g~~~~----------------------------------pkp~ 193 (268)
+.|.++.++||..-.++...+..++| +..||+.|+....| +.+-
T Consensus 212 ~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySgg 291 (424)
T KOG2469|consen 212 DSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGG 291 (424)
T ss_pred hhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcc
Confidence 89999999999999999999997665 66789887743111 1123
Q ss_pred HHHHHHhcCCCCCCcEEEEcCcHh-hHHHhhccCccCCCcEEEE
Q 024375 194 VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 194 ~l~~~~~~l~~~~~~~~~VGDs~~-Di~aa~~~~~~agi~~i~v 236 (268)
....+++.++....+++||||... ||.-.++ .-|-+++.|
T Consensus 292 s~~~~~~~l~~~g~diLy~gdHi~~dvl~skk---~~~wrt~lv 332 (424)
T KOG2469|consen 292 SLKTVETSMKVKGKDILYGGDHIWGDVLVSKK---RRGWRTVLV 332 (424)
T ss_pred hHHHHHHHhcccccceeecccceeeeEEecce---ecceEEEEE
Confidence 455556666666688999999864 5555443 245555555
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=80.74 E-value=6.6 Score=38.35 Aligned_cols=69 Identities=17% Similarity=0.253 Sum_probs=59.2
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC------C--CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHH
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------T--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~------~--~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~a 221 (268)
++|+-++|+|-....-++.+.++ + .+.|.-.+ . .||.+-++++++++++..+..+||.|++.-.+-
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~ 342 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAEREL 342 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHH
Confidence 79999999999999999998886 2 34555543 1 299999999999999999999999999999999
Q ss_pred hhc
Q 024375 222 VIK 224 (268)
Q Consensus 222 a~~ 224 (268)
-++
T Consensus 343 vk~ 345 (574)
T COG3882 343 VKR 345 (574)
T ss_pred HHh
Confidence 997
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=80.62 E-value=0.97 Score=46.34 Aligned_cols=64 Identities=14% Similarity=-0.029 Sum_probs=45.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.|-..+..+++ +.+++.++++||+.+|+.+-+. ++-..++|.=|-. ...-++.+.+++++...|
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~----~~~~~~~v~vG~~--------~s~A~~~l~~~~eV~~~L 720 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRA----LPETAITVKVGPG--------ESRARYRLPSQREVRELL 720 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHh----cccCceEEEECCC--------CCcceEeCCCHHHHHHHH
Confidence 78889999988 6788899999999999999886 2211233433431 123358888888876655
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=80.38 E-value=20 Score=33.24 Aligned_cols=121 Identities=15% Similarity=0.141 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHHhhhccc--cccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCC--CC
Q 024375 111 NREALIELSGKVRDEWMDTDF--TTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TP 180 (268)
Q Consensus 111 ~~~~~~~~~~~~r~~~~~~~~--~~~~~~~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~f 180 (268)
+.++.-....--|+.....+. +-.-+.-.++|.+.++++ ++|+.+.++++.....++++.+ +|-.- ..
T Consensus 148 ta~eAv~~a~lare~~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~avmPl 225 (326)
T PRK11840 148 TAEEAVRTLRLAREAGGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVAVMPL 225 (326)
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEEEeec
Confidence 445555555555554322111 111223468999999999 5799997888888888888877 56520 12
Q ss_pred ceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcC---cHhhHHHhhccCccCCCcEEEEecCCC
Q 024375 181 DRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYN 241 (268)
Q Consensus 181 ~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGD---s~~Di~aa~~~~~~agi~~i~v~wGy~ 241 (268)
..-||+..+ .+|+.++.+.+...++ ++||= +..|+..|.+ .|.+-+++..|.-
T Consensus 226 ~~pIGsg~gv~~p~~i~~~~e~~~vp----VivdAGIg~~sda~~Ame----lGadgVL~nSaIa 282 (326)
T PRK11840 226 GAPIGSGLGIQNPYTIRLIVEGATVP----VLVDAGVGTASDAAVAME----LGCDGVLMNTAIA 282 (326)
T ss_pred cccccCCCCCCCHHHHHHHHHcCCCc----EEEeCCCCCHHHHHHHHH----cCCCEEEEcceec
Confidence 445665544 7999999999986655 77774 5688888888 7888899998874
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 268 | |||
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 100.0 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.98 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.97 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.97 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.97 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.97 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.97 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.96 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.96 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.95 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.95 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.95 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.95 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.95 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.95 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.95 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.95 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.95 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.95 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.95 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.95 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.94 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.94 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.94 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.94 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.94 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.94 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.94 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.94 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.94 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.94 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.94 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.93 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.93 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.93 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.93 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.93 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.93 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.92 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.92 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.92 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.92 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.91 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.91 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.91 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.89 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.89 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.88 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.88 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.88 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.88 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.87 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.87 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.87 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.87 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.87 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.86 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.86 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.85 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.85 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.85 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.85 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.84 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.84 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.83 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.82 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.81 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.81 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.79 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.79 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.67 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.78 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.77 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.75 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.75 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.75 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.75 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.73 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.73 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.72 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.71 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.71 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.71 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.71 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.7 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.7 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.69 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.69 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.69 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.67 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.65 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.64 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.63 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.61 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.61 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.61 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.6 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.58 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.56 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.5 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.47 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.45 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.44 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.41 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.4 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.38 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.38 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.35 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.34 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.34 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.25 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.16 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.16 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.14 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.12 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.11 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.08 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.07 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.0 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.93 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.91 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.85 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.73 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.69 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.68 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.61 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.44 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.34 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.14 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.8 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.79 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 97.77 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.55 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.5 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.47 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.41 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.41 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 96.93 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.84 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.35 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.35 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.2 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.86 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.65 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 95.53 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 94.88 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 94.6 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 94.31 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 93.84 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 93.23 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 93.15 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 93.08 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 91.26 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 88.79 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 88.71 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.68 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 88.32 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 87.1 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 86.34 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 85.57 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 84.99 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 84.85 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 81.6 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 80.87 |
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-34 Score=242.89 Aligned_cols=203 Identities=15% Similarity=0.195 Sum_probs=157.2
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.++++++ ++... .+.++.++|.+....+. ..
T Consensus 4 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~~-~~----------- 58 (210)
T 2ah5_A 4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKELG------VPSPD-------AKTIRGFMGPPLESSFA-TC----------- 58 (210)
T ss_dssp CCEEEECSBTTTEECHHHHHHHHHHHHHHHT------CCCCC-------HHHHHHTSSSCHHHHHH-TT-----------
T ss_pred CCEEEEcCCCcCccCHHHHHHHHHHHHHHcC------CCCCC-------HHHHHHHcCccHHHHHH-HH-----------
Confidence 5899999999999999999999999999994 32110 12355666655432210 00
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEc
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVT 159 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvT 159 (268)
++.+..++....+++.|... ......+|||+.++|+ ++|++++|+|
T Consensus 59 ----------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~~~l~i~T 106 (210)
T 2ah5_A 59 ----------------------------LSKDQISEAVQIYRSYYKAK----GIYEAQLFPQIIDLLEELSSSYPLYITT 106 (210)
T ss_dssp ----------------------------SCGGGHHHHHHHHHHHHHHT----GGGSCEECTTHHHHHHHHHTTSCEEEEE
T ss_pred ----------------------------cCHHHHHHHHHHHHHHHHHh----ccCCCCCCCCHHHHHHHHHcCCeEEEEe
Confidence 01111223334445544332 1234579999999999 3399999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEecCC--CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEe
Q 024375 160 SNQSRFVETLLRELAGVTITPDRLYGLG--TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 237 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f~~i~g~~--~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~ 237 (268)
|+++..++..|++ +|+..||+.|++++ .||||++++.+++++|++|++|+|||||.+|+++|++ ||+++|+|.
T Consensus 107 ~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~----aG~~~i~v~ 181 (210)
T 2ah5_A 107 TKDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARE----TGIQKLAIT 181 (210)
T ss_dssp EEEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEEEEES
T ss_pred CCCHHHHHHHHHh-cCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHH----CCCcEEEEc
Confidence 9999999999996 99999999999866 3599999999999999999999999999999999998 899999999
Q ss_pred cCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 238 WGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 238 wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
||++..+++... .|++++.++.+|...|+
T Consensus 182 ~~~~~~~~l~~~--~a~~v~~~~~el~~~l~ 210 (210)
T 2ah5_A 182 WGFGEQADLLNY--QPDYIAHKPLEVLAYFQ 210 (210)
T ss_dssp SSSSCHHHHHTT--CCSEEESSTTHHHHHTC
T ss_pred CCCCCHHHHHhC--CCCEEECCHHHHHHHhC
Confidence 999887777643 58899999999988764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=238.18 Aligned_cols=203 Identities=17% Similarity=0.129 Sum_probs=149.2
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
|+|+|||||||+||.+.+..+++.++++++ ++.. .+..+.+.|....... ...+...
T Consensus 2 kAViFD~DGTL~ds~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~-------- 58 (216)
T 3kbb_A 2 EAVIFDMDGVLMDTEPLYFEAYRRVAESYG------KPYT--------EDLHRRIMGVPEREGL-PILMEAL-------- 58 (216)
T ss_dssp CEEEEESBTTTBCCGGGHHHHHHHHHHHTT------CCCC--------HHHHHHHTTSCHHHHH-HHHHHHT--------
T ss_pred eEEEECCCCcccCCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHHhccchhhhh-hhhhhcc--------
Confidence 799999999999999999999999999984 3311 1234555554433322 1111100
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvT 159 (268)
.. ....+.+ ...+.+.+... +.....++||+.++|+ ++|++++|+|
T Consensus 59 ----~~--------------------~~~~~~~---~~~~~~~~~~~----~~~~~~~~pg~~~~l~~L~~~g~~~~i~t 107 (216)
T 3kbb_A 59 ----EI--------------------KDSLENF---KKRVHEEKKRV----FSELLKENPGVREALEFVKSKRIKLALAT 107 (216)
T ss_dssp ----TC--------------------CSCHHHH---HHHHHHHHHHH----HHHHCCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred ----cc--------------------hhhHHHH---HHHHHHHHHHH----HHHhcccCccHHHHHHHHHHcCCCccccc
Confidence 00 0011111 11122222221 2233578999999999 7999999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE-
Q 024375 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY- 234 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i- 234 (268)
|+++..+...+++ +|+..||+.+++++ .||+|+++..+++++|++|++|+||||+.+|+++|++ +|+++|
T Consensus 108 n~~~~~~~~~l~~-~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~----aG~~~i~ 182 (216)
T 3kbb_A 108 STPQREALERLRR-LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKS----AGIERIY 182 (216)
T ss_dssp SSCHHHHHHHHHH-TTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH----TTCCCEE
T ss_pred CCcHHHHHHHHHh-cCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHH----cCCcEEE
Confidence 9999999999996 99999999999865 3599999999999999999999999999999999999 899998
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|.||+++.+++.++++ ..+.+|.++.+.|
T Consensus 183 ~v~~g~~~~~~l~~~~~---~~i~~~~eli~~l 212 (216)
T 3kbb_A 183 GVVHSLNDGKALLEAGA---VALVKPEEILNVL 212 (216)
T ss_dssp EECCSSSCCHHHHHTTC---SEEECGGGHHHHH
T ss_pred EecCCCCCHHHHHhCCC---cEECCHHHHHHHH
Confidence 69999999988887643 3444677665544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-33 Score=240.69 Aligned_cols=226 Identities=12% Similarity=0.119 Sum_probs=166.2
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCC-chhhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVD-SALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~-~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
|.++|+|||||||+||.+.+..+++.+++.++ ++ ... .+.++.++|.+....+ .+.+....
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g------~~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~~---- 64 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTG------HRHDFT-------VEDIKNFFGSGVVVAV-TRALAYEA---- 64 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTT------SCCCCC-------HHHHHHHCSSCHHHHH-HHHHHHHT----
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcC------CCCCCC-------HHHHHHhcCccHHHHH-HHHHHhcc----
Confidence 47999999999999999999999999999983 32 111 2346677887655443 23221000
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHH-hhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIME-EWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (268)
+...... ..+. ..+.. ..+++.+.+++....+++.|.+. +.....+|||+.++|+ ++|+++
T Consensus 65 -------~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~ 129 (240)
T 2hi0_A 65 -------GSSRESL-VAFG---TKDEQIPEAVTQTEVNRVLEVFKPYYADH----CQIKTGPFPGILDLMKNLRQKGVKL 129 (240)
T ss_dssp -------TCCHHHH-TTTT---STTCCCCTTCCHHHHHHHHHHHHHHHHHT----SSSSCEECTTHHHHHHHHHHTTCEE
T ss_pred -------ccccccc-cccc---ccccccCCCCCHHHHHHHHHHHHHHHHHh----hhhcCCcCCCHHHHHHHHHHCCCEE
Confidence 0000100 0000 00000 01234555556666666666543 2334679999999998 689999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi 231 (268)
+|+||++...++.+|++ +|+. +|+.+++++ .||||+++..+++++|++|++|+||||+.+|+++|++ ||+
T Consensus 130 ~i~t~~~~~~~~~~l~~-~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~----aG~ 203 (240)
T 2hi0_A 130 AVVSNKPNEAVQVLVEE-LFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARN----SEM 203 (240)
T ss_dssp EEEEEEEHHHHHHHHHH-HSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTC
T ss_pred EEEeCCCHHHHHHHHHH-cCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH----CCC
Confidence 99999999999999996 9998 999999764 3599999999999999999999999999999999998 899
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++|+|.||++..+++... .|++++.++.++...|
T Consensus 204 ~~v~v~~~~~~~~~~~~~--~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 204 DEIAVNWGFRSVPFLQKH--GATVIVDTAEKLEEAI 237 (240)
T ss_dssp EEEEESSSSSCHHHHHHT--TCCCEECSHHHHHHHH
T ss_pred eEEEECCCCCchhHHHhc--CCCEEECCHHHHHHHh
Confidence 999999999887766643 5789999999997655
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-31 Score=225.14 Aligned_cols=205 Identities=16% Similarity=0.197 Sum_probs=164.9
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+++.++++++ .+.. ..+.++.+.|.+....+ ..
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~-~~----------- 57 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFD------IQVE-------DLSSLNKFVGPPLKTSF-ME----------- 57 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTT------CCCS-------CGGGGGGGSSSCHHHHH-HH-----------
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhCcCHHHHH-HH-----------
Confidence 57999999999999999999999999999884 2211 12456666666543332 11
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.++++.+........+++.|... ......+|||+.++|+ ++|++++|
T Consensus 58 --------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i 107 (226)
T 3mc1_A 58 --------------------------YYNFDEETATVAIDYYRDYFKAK----GMFENKVYDGIEALLSSLKDYGFHLVV 107 (226)
T ss_dssp --------------------------HHCCCHHHHHHHHHHHHHHHTTT----GGGSCCBCTTHHHHHHHHHHHTCEEEE
T ss_pred --------------------------HhCCCHHHHHHHHHHHHHHHHHh----CcccCccCcCHHHHHHHHHHCCCeEEE
Confidence 11344455555555666665432 3345689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||.....++..+++ +|+..+|+.+++++ .+|||+++..+++++|++|++|+||||+.+|+.+|++ ||+++
T Consensus 108 ~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~----aG~~~ 182 (226)
T 3mc1_A 108 ATSKPTVFSKQILEH-FKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALK----NNLPS 182 (226)
T ss_dssp EEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHT----TTCCE
T ss_pred EeCCCHHHHHHHHHH-hCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHH----CCCCE
Confidence 999999999999996 99999999999865 2499999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||++..+++.+. .|++++.++.+|...|
T Consensus 183 i~v~~g~~~~~~~~~~--~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 183 IGVTYGFGSYEELKNA--GANYIVNSVDELHKKI 214 (226)
T ss_dssp EEESSSSSCHHHHHHH--TCSEEESSHHHHHHHH
T ss_pred EEEccCCCCHHHHHHc--CCCEEECCHHHHHHHH
Confidence 9999999988877544 5789999999998765
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-32 Score=235.35 Aligned_cols=211 Identities=15% Similarity=0.101 Sum_probs=149.0
Q ss_pred CC-cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~-~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
|+ |+|||||||||+||.+.+..+++.++++++ ++. +.+..+.+.|.+....+ .+.+.. .
T Consensus 3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g------~~~--------~~~~~~~~~g~~~~~~~-~~~~~~-~---- 62 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIG------ISI--------DAQFNESLKGISRDESL-RRILQH-G---- 62 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTT------CCC--------CTTGGGGGTTCCHHHHH-HHHHHH-T----
T ss_pred ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcC------CCC--------CHHHHHHHcCCCHHHHH-HHHHHH-h----
Confidence 54 899999999999999999999999999994 321 12345666776655543 233311 0
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
+...+ .......+........|...... .....++||+.++|+ ++|++++
T Consensus 63 -------~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~ll~~L~~~g~~i~ 115 (243)
T 4g9b_A 63 -------GKEGD------------------FNSQERAQLAYRKNLLYVHSLRE--LTVNAVLPGIRSLLADLRAQQISVG 115 (243)
T ss_dssp -------TCGGG------------------CCHHHHHHHHHHHHHHHHHHHHT--CCGGGBCTTHHHHHHHHHHTTCEEE
T ss_pred -------hcccc------------------hhHHHHHHHHHHHHHHHHHHHHh--cccccccccHHHHHHhhhcccccce
Confidence 10000 01111111111111111111111 123468999999999 7999999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|+||+.. +..+|++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+|||||.+||++|++ ||++
T Consensus 116 i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~----aG~~ 188 (243)
T 4g9b_A 116 LASVSLN--APTILAA-LELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINA----SGMR 188 (243)
T ss_dssp ECCCCTT--HHHHHHH-TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH----HTCE
T ss_pred ecccccc--hhhhhhh-hhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----cCCE
Confidence 9999865 4678995 99999999999865 3599999999999999999999999999999999999 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 233 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+|.||+...+.+. ....++.+.++.+++..|
T Consensus 189 ~I~V~~g~~~ad~~~--~~~~~l~~~~l~~~~~~l 221 (243)
T 4g9b_A 189 SVGIGAGLTGAQLLL--PSTESLTWPRLSAFWQNV 221 (243)
T ss_dssp EEEESTTCCSCSEEE--SSGGGCCHHHHHHHHHHH
T ss_pred EEEECCCCCcHHHhc--CChhhcCHHHHHHHHHHH
Confidence 999999998765433 233457777788776544
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=222.06 Aligned_cols=205 Identities=17% Similarity=0.178 Sum_probs=160.2
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||...+..+++.++++++.. .+ .+.++.+.|.+....+ ...+ ..
T Consensus 19 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~----~~----------~~~~~~~~g~~~~~~~-~~~~-~~------- 75 (237)
T 4ex6_A 19 DRGVILDLDGTLADTPAAIATITAEVLAAMGTA----VS----------RGAILSTVGRPLPASL-AGLL-GV------- 75 (237)
T ss_dssp CEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCC----CC----------HHHHHHHTTSCHHHHH-HHHH-TS-------
T ss_pred CCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCC----CC----------HHHHHHhcCccHHHHH-HHHh-CC-------
Confidence 589999999999999999999999999998411 11 1345556666655443 1222 10
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccc--cCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWI--GANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--~~~~lypGv~e~L~---~~g~~l~ 156 (268)
. .+.+.+......+++.|.+. +. ....+|||+.++|+ ++|++++
T Consensus 76 -----~----------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~ 124 (237)
T 4ex6_A 76 -----P----------------------VEDPRVAEATEEYGRRFGAH----VRAAGPRLLYPGVLEGLDRLSAAGFRLA 124 (237)
T ss_dssp -----C----------------------TTSHHHHHHHHHHHHHHHHH----HHHHGGGGBCTTHHHHHHHHHHTTEEEE
T ss_pred -----C----------------------CCHHHHHHHHHHHHHHHHHh----cccccCCccCCCHHHHHHHHHhCCCcEE
Confidence 0 01222233333444444332 22 34579999999999 6899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|+||.....++.++++ +|+..+|+.+++++ .+|||+++..+++++|++|++|+||||+.+|+.+|++ +|++
T Consensus 125 i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG~~ 199 (237)
T 4ex6_A 125 MATSKVEKAARAIAEL-TGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRA----AGMT 199 (237)
T ss_dssp EECSSCHHHHHHHHHH-HTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTCE
T ss_pred EEcCCChHHHHHHHHH-cCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHH----CCCe
Confidence 9999999999999996 99999999999876 2499999999999999999999999999999999998 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 233 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+|.||++..+++... .|++++.++.+|...|
T Consensus 200 ~i~v~~g~~~~~~~~~~--~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 200 VIGVSYGVSGPDELMRA--GADTVVDSFPAAVTAV 232 (237)
T ss_dssp EEEESSSSSCHHHHHHT--TCSEEESSHHHHHHHH
T ss_pred EEEEecCCCCHHHHHhc--CCCEEECCHHHHHHHH
Confidence 99999999888877764 5789999999998766
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-31 Score=226.56 Aligned_cols=199 Identities=17% Similarity=0.229 Sum_probs=155.6
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.++++++ ++.. ..+.++.++|.+....+ .+.+..
T Consensus 3 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~-~~~~~~-------- 60 (222)
T 2nyv_A 3 LRVILFDLDGTLIDSAKDIALALEKTLKELG------LEEY-------YPDNVTKYIGGGVRALL-EKVLKD-------- 60 (222)
T ss_dssp ECEEEECTBTTTEECHHHHHHHHHHHHHHTT------CGGG-------CCSCGGGGCSSCHHHHH-HHHHGG--------
T ss_pred CCEEEECCCCcCCCCHHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhCcCHHHHH-HHHhCh--------
Confidence 6899999999999999999999999999883 3311 12456777777665443 222210
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
... ++....+++.|... +.....+|||+.++|+ ++|++++|+
T Consensus 61 ------~~~-------------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i~ 105 (222)
T 2nyv_A 61 ------KFR-------------------------EEYVEVFRKHYLEN----PVVYTKPYPEIPYTLEALKSKGFKLAVV 105 (222)
T ss_dssp ------GCC-------------------------THHHHHHHHHHHHC----SCSSCEECTTHHHHHHHHHHTTCEEEEE
T ss_pred ------HHH-------------------------HHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEE
Confidence 000 01122334444332 2344689999999999 689999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||.+...++.++++ +|+..+|+.+++++ .||||+++..+++++|++|++|+||||+.+|+.+|++ +|+++|
T Consensus 106 s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~----aG~~~i 180 (222)
T 2nyv_A 106 SNKLEELSKKILDI-LNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKR----AGTKTA 180 (222)
T ss_dssp CSSCHHHHHHHHHH-TTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEEE
T ss_pred cCCCHHHHHHHHHH-cCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHH----CCCeEE
Confidence 99999999999996 99999999999865 3599999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|.||++..+. ..|++++.++.+|...|
T Consensus 181 ~v~~g~~~~~~-----~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 181 LALWGYVKLNS-----QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp EETTSSCSCCC-----CCCSEEESSTTHHHHHH
T ss_pred EEcCCCCCccc-----cCCCEEECCHHHHHHHH
Confidence 99999876543 56899999999997655
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=225.77 Aligned_cols=215 Identities=19% Similarity=0.186 Sum_probs=162.3
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+++.+++.++ ++... .+.++.++|.|....+ .+.+...
T Consensus 22 ~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------ 81 (243)
T 2hsz_A 22 QFKLIGFDLDGTLVNSLPDLALSINSALKDVN------LPQAS-------ENLVMTWIGNGADVLS-QRAVDWA------ 81 (243)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTT------CCCCC-------HHHHHHHCSSCHHHHH-HHHHHHH------
T ss_pred cCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcC------CCCCC-------HHHHHHHhCchHHHHH-HHHhhhh------
Confidence 46899999999999999999999999999983 32111 1345567787765543 2222110
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
. ... ..+.+.+.+.+....+.+.|... +.....+|||+.++|+ ++|++++|
T Consensus 82 -----------------~----~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i 135 (243)
T 2hsz_A 82 -----------------C----KQA-EKELTEDEFKYFKRQFGFYYGEN----LCNISRLYPNVKETLEALKAQGYILAV 135 (243)
T ss_dssp -----------------H----HHH-TCCCCHHHHHHHHHHHHHHHHHH----TTSSCEECTTHHHHHHHHHHTTCEEEE
T ss_pred -----------------h----ccc-cccCCHHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCEEEE
Confidence 0 000 01123344444444455554432 2334689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||.+...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++ +|+.+
T Consensus 136 ~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~----aG~~~ 210 (243)
T 2hsz_A 136 VTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS----AGCAV 210 (243)
T ss_dssp ECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred EECCcHHHHHHHHHH-cCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHH----CCCeE
Confidence 999999999999996 99999999999865 3599999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
++|.||++...++. ...|++++.++.+|...|+
T Consensus 211 i~v~~g~~~~~~~~--~~~ad~vi~~~~el~~~l~ 243 (243)
T 2hsz_A 211 VGLTYGYNYNIPIA--QSKPDWIFDDFADILKITQ 243 (243)
T ss_dssp EEESSSCSTTCCGG--GGCCSEEESSGGGGGGGTC
T ss_pred EEEcCCCCchhhhh--hCCCCEEECCHHHHHHHhC
Confidence 99999987544333 3468899999999988774
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-30 Score=216.87 Aligned_cols=209 Identities=16% Similarity=0.069 Sum_probs=162.2
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+|+...+..++..++++++ ++.. .+.++.++|.+....+ ...+...
T Consensus 5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------ 63 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAEN------IPLA--------MWRIHRKIGMSGGLML-KSLSRET------ 63 (233)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHHHHTT------CCCC--------HHHHHHHTTSCHHHHH-HHHHHC-------
T ss_pred cCcEEEEcCCCccccChHHHHHHHHHHHHHcC------CCCC--------HHHHHHHcCCcHHHHH-HHHHHhc------
Confidence 46899999999999999999999999999883 3311 1234555555543322 1111100
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+. .++.+.+.+....+++.|... .....+|||+.++|+ ++|++++|
T Consensus 64 ------~~--------------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~~i 112 (233)
T 3s6j_A 64 ------GM--------------------SITDEQAERLSEKHAQAYERL-----QHQIIALPGAVELLETLDKENLKWCI 112 (233)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHHHHHT-----GGGCEECTTHHHHHHHHHHTTCCEEE
T ss_pred ------CC--------------------CCCHHHHHHHHHHHHHHHHHh-----hccCccCCCHHHHHHHHHHCCCeEEE
Confidence 00 123444445555555555432 234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||.+...++..+++ +|+..+|+.+++++ .+|||+++..+++++|++|++|+||||+.+|+.+|++ +|+++
T Consensus 113 ~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~----aG~~~ 187 (233)
T 3s6j_A 113 ATSGGIDTATINLKA-LKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARR----CKATG 187 (233)
T ss_dssp ECSSCHHHHHHHHHT-TTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----TTCEE
T ss_pred EeCCchhhHHHHHHh-cchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHH----CCCEE
Confidence 999999999999995 99999999999865 3499999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
|+|.||++..+++... .|++++.++.+|...|+
T Consensus 188 i~v~~g~~~~~~l~~~--~ad~v~~~~~el~~~l~ 220 (233)
T 3s6j_A 188 VGLLSGGYDIGELERA--GALRVYEDPLDLLNHLD 220 (233)
T ss_dssp EEEGGGSCCHHHHHHT--TCSEEESSHHHHHHTGG
T ss_pred EEEeCCCCchHhHHhc--CCCEEECCHHHHHHHHH
Confidence 9999999988888764 47899999999987763
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-30 Score=219.76 Aligned_cols=204 Identities=19% Similarity=0.197 Sum_probs=165.0
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||-+.+..+++.++++++ .+ . ..+.++.+.|.+....+
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g------~~-~-------~~~~~~~~~g~~~~~~~-------------- 79 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFG------IK-E-------DLENLDQFIGPPLHDTF-------------- 79 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTT------CC-C-------CGGGGGGGSSSCHHHHH--------------
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcC------CC-C-------CHHHHHHHhCccHHHHH--------------
Confidence 56899999999999999999999999999983 32 1 12456666665443321
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.+.++++.+...+....+++.|... ......+|||+.++|+ ++|++++|
T Consensus 80 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i 131 (240)
T 3sd7_A 80 ------------------------KEYYKFEDKKAKEAVEKYREYFADK----GIFENKIYENMKEILEMLYKNGKILLV 131 (240)
T ss_dssp ------------------------HHTSCCCHHHHHHHHHHHHHHHHHT----GGGCCEECTTHHHHHHHHHHTTCEEEE
T ss_pred ------------------------HHHhCCCHHHHHHHHHHHHHHHHHh----cccccccCccHHHHHHHHHHCCCeEEE
Confidence 1112445555556666666665543 2344689999999998 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
+||.+...++..++. +|+..+|+.+++++ .+|||+++..+++++|++ |++|+||||+.+|+.+|++ +|++
T Consensus 132 ~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~----aG~~ 206 (240)
T 3sd7_A 132 ATSKPTVFAETILRY-FDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKK----IGID 206 (240)
T ss_dssp EEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHH----HTCE
T ss_pred EeCCcHHHHHHHHHH-cCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHH----CCCC
Confidence 999999999999996 99999999999765 249999999999999999 9999999999999999999 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 233 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+|.||++..+++... .|++++.++.+|...|
T Consensus 207 ~i~v~~g~~~~~~~~~~--~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 207 SIGVLYGYGSFEEISES--EPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEESSSSCCHHHHHHH--CCSEEESSSTTHHHHH
T ss_pred EEEEeCCCCCHHHHhhc--CCCEEECCHHHHHHHh
Confidence 99999999998877544 5789999999998765
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-30 Score=222.00 Aligned_cols=216 Identities=14% Similarity=0.064 Sum_probs=165.0
Q ss_pred CcEEEEecCcccccChhHH-HHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEET-ALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i-~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.++|+||+||||+||-..+ ..+++.++++++ ++. ..+.++.++|.+....+ ...+ .
T Consensus 14 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g------~~~--------~~~~~~~~~~~~~~~~~-~~~~-~------- 70 (277)
T 3iru_A 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQEG------IEV--------TQAEAREPMGTEKSEHI-RRML-G------- 70 (277)
T ss_dssp CCEEEEESBTTTBSTTCCHHHHHHHHHHHTTT------CCC--------CHHHHHTTTTSCHHHHH-HHHT-T-------
T ss_pred CcEEEEcCCCCcccCCcccHHHHHHHHHHHhC------CCC--------CHHHHHHHhcCchHHHH-HHhc-c-------
Confidence 5899999999999997755 788888888883 331 12456777777665543 1221 0
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhh--CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (268)
. ... ...+...+ .++.+.+.+....+++.|.+.+ .....+|||+.++|+ ++|+++
T Consensus 71 ------~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~ 130 (277)
T 3iru_A 71 ------N---SRI-------ANAWLSIKGQASNEEDIKRLYDLFAPIQTRIV----AQRSQLIPGWKEVFDKLIAQGIKV 130 (277)
T ss_dssp ------S---HHH-------HHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH----HHTCCBCTTHHHHHHHHHHTTCEE
T ss_pred ------c---hHH-------HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHh----hccCccCcCHHHHHHHHHHcCCeE
Confidence 0 111 11122233 2456667777777766665432 344689999999998 789999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCC-CceEecCC----CCCcHHHHHHHHhcCCCCC-CcEEEEcCcHhhHHHhhccCccC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTIT-PDRLYGLG----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~-f~~i~g~~----~~pkp~~l~~~~~~l~~~~-~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
+|+||++...++.+++. +|+..+ |+.+++++ .||||+++..+++++|++| ++|+||||+.+|+++|++ +
T Consensus 131 ~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~----a 205 (277)
T 3iru_A 131 GGNTGYGPGMMAPALIA-AKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLR----A 205 (277)
T ss_dssp EEECSSCHHHHHHHHHH-HHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHH----T
T ss_pred EEEeCCchHHHHHHHHh-cCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHH----C
Confidence 99999999999999996 998888 89999865 2599999999999999999 999999999999999999 8
Q ss_pred CCcEEEEecCCC-----------------------CHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 230 GWNLYLVDWGYN-----------------------TPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 230 gi~~i~v~wGy~-----------------------~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+++|+|.||++ ..+++... .|++++.++.+|...|
T Consensus 206 G~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 206 GMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNA--GAHYVIDSVADLETVI 264 (277)
T ss_dssp TCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHH--TCSEEESSGGGTHHHH
T ss_pred CCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhC--CCCEEecCHHHHHHHH
Confidence 999999999986 34455544 5889999999997765
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=224.07 Aligned_cols=201 Identities=15% Similarity=0.127 Sum_probs=143.3
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.|+|||||||||+||.+.+..+++.++++++ ++.. .+..+.+.|.+....+ .+.+..
T Consensus 25 MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~~~------- 82 (250)
T 4gib_A 25 MIEAFIFDLDGVITDTAYYHYMAWRKLAHKVG------IDID--------TKFNESLKGISRMESL-DRILEF------- 82 (250)
T ss_dssp CCCEEEECTBTTTBCCHHHHHHHHHHHHHTTT------CCCC--------TTGGGGTTTCCHHHHH-HHHHHH-------
T ss_pred hhheeeecCCCcccCCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHHhCcchHHHH-HHhhhh-------
Confidence 78999999999999999999999999999984 3211 1234455554433322 122211
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
....++++..........+.+.|...... .....+|||+.++|+ ++|+++++
T Consensus 83 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~ll~~Lk~~g~~i~i 137 (250)
T 4gib_A 83 -----------------------GNKKYSFSEEEKVRMAEEKNNYYVSLIDE--ITSNDILPGIESLLIDVKSNNIKIGL 137 (250)
T ss_dssp -----------------------TTCTTTSCHHHHHHHHHHHHHHHHHHHTT--CCGGGSCTTHHHHHHHHHHTTCEEEE
T ss_pred -----------------------hcCCCCCCHHHHHHHHHHHHHHHHHHHhh--ccccccchhHHHHHHHHHhccccccc
Confidence 00011122233333333333333332211 223468999999998 79999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+|++.. +..+|++ +|+..||+.|++++ .||+|+++..+++++|++|++|+|||||.+|+++|++ ||+++
T Consensus 138 ~~~~~~--~~~~L~~-~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~----aG~~~ 210 (250)
T 4gib_A 138 SSASKN--AINVLNH-LGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINS----ANMFS 210 (250)
T ss_dssp CCSCTT--HHHHHHH-HTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTCEE
T ss_pred ccccch--hhhHhhh-cccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHH----cCCEE
Confidence 888754 5678995 99999999999875 3599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
|+|.. .+++ ..|++++.++++|
T Consensus 211 i~v~~----~~~~----~~ad~vi~~l~eL 232 (250)
T 4gib_A 211 VGVGN----YENL----KKANLVVDSTNQL 232 (250)
T ss_dssp EEESC----TTTT----TTSSEEESSGGGC
T ss_pred EEECC----hhHh----ccCCEEECChHhC
Confidence 99842 2223 2578999999987
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=216.56 Aligned_cols=200 Identities=14% Similarity=0.127 Sum_probs=151.3
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||.+.+..+.+.++++++ .+.. .+.++.++|.+....+ +.+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~--------- 57 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYG------KPFS--------PAQAQKTFPMAAEQAM--TEL--------- 57 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTT------CCCC--------HHHHHHHTTSCHHHHH--HHT---------
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhC------CCCC--------HHHHHHHcCCcHHHHH--HHc---------
Confidence 46899999999999999999999999988883 2211 1234555554433221 111
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+++.+.+.+.+..+.+.+.. +.....++||+.++|+ ++ ++++|
T Consensus 58 ----------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l~~~-~~~~i 103 (209)
T 2hdo_A 58 ----------------------------GIAASEFDHFQAQYEDVMAS-----HYDQIELYPGITSLFEQLPSE-LRLGI 103 (209)
T ss_dssp ----------------------------TCCGGGHHHHHHHHHHHHTT-----CGGGCEECTTHHHHHHHSCTT-SEEEE
T ss_pred ----------------------------CCCHHHHHHHHHHHHHHHhh-----hcccCCcCCCHHHHHHHHHhc-CcEEE
Confidence 11111222222333333322 2234679999999999 56 99999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++ +|+.+
T Consensus 104 ~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~----aG~~~ 178 (209)
T 2hdo_A 104 VTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQA----ANVDF 178 (209)
T ss_dssp ECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred EeCCCHHHHHHHHHH-cChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHH----cCCeE
Confidence 999999999999995 99999999999764 3588999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
+++.||++..+++. . |++++.++.+|...|+
T Consensus 179 ~~~~~~~~~~~~~~---~-a~~~~~~~~el~~~l~ 209 (209)
T 2hdo_A 179 GLAVWGMDPNADHQ---K-VAHRFQKPLDILELFK 209 (209)
T ss_dssp EEEGGGCCTTGGGS---C-CSEEESSGGGGGGGC-
T ss_pred EEEcCCCCChhhhc---c-CCEEeCCHHHHHHhhC
Confidence 99999998655443 3 8999999999988774
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=212.06 Aligned_cols=207 Identities=11% Similarity=-0.002 Sum_probs=151.6
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHH-hCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARV-RWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~-~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
|.++|+|||||||+||-+.+..+++.++++ ++ .+. . +.++.+.|......+ ...+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g------~~~--------~-~~~~~~~g~~~~~~~-~~~~-------- 58 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYG------TEG--------S-TGSHDFSGKMDGAII-YEVL-------- 58 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHS------CCC--------C-C---CCTTCCHHHHH-HHHH--------
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhC------CCC--------c-cchhhhcCCChHHHH-HHHH--------
Confidence 479999999999999999999999999888 53 221 0 234555665543322 1222
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCC----HHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hC-
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSEN----REALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA- 151 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~- 151 (268)
+.+|+. .+.+......+.+.|.+... .....++||+.++|+ ++
T Consensus 59 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~ 109 (234)
T 2hcf_A 59 --------------------------SNVGLERAEIADKFDKAKETYIALFRERAR---REDITLLEGVRELLDALSSRS 109 (234)
T ss_dssp --------------------------HTTTCCHHHHHHHHHHHHHHHHHHHHHHCC---GGGEEECTTHHHHHHHHHTCT
T ss_pred --------------------------HHcCCCcccchhHHHHHHHHHHHHHHHHhc---cCCCCcCCCHHHHHHHHHhCC
Confidence 112222 11223333344444432211 133578999999999 57
Q ss_pred CCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-C--C--CcHHHHHHHHhcCC--CCCCcEEEEcCcHhhHHHhhc
Q 024375 152 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T--G--PKVNVLKQLQKKPE--HQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 152 g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~--~--pkp~~l~~~~~~l~--~~~~~~~~VGDs~~Di~aa~~ 224 (268)
|++++|+||++...+...+++ +|+..+|+.++.++ . + |+|+++..+++++| ++|++|+||||+.+|+.+|++
T Consensus 110 g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~ 188 (234)
T 2hcf_A 110 DVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARE 188 (234)
T ss_dssp TEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHT
T ss_pred CceEEEEcCCcHHHHHHHHHH-CCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHH
Confidence 899999999999999999995 99999999766543 2 2 56788999999999 899999999999999999998
Q ss_pred cCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 225 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 225 ~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+++++|.||+...+++.. ..|++++.++.+|...|
T Consensus 189 ----aG~~~i~v~~~~~~~~~~~~--~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 189 ----LDARSIAVATGNFTMEELAR--HKPGTLFKNFAETDEVL 225 (234)
T ss_dssp ----TTCEEEEECCSSSCHHHHHT--TCCSEEESCSCCHHHHH
T ss_pred ----CCCcEEEEcCCCCCHHHHHh--CCCCEEeCCHHhHHHHH
Confidence 89999999999988777654 35889999999987654
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-29 Score=213.30 Aligned_cols=204 Identities=12% Similarity=0.026 Sum_probs=157.2
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+|+.+.+..++..++++++ ++.. ....+...|......+ ...+.
T Consensus 24 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~~--------- 79 (243)
T 3qxg_A 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHG------LDLS--------REEAYMHEGRTGASTI-NIVFQ--------- 79 (243)
T ss_dssp CCEEEECSBTTTBCCHHHHHHHHHHHHHHTT------CCCC--------HHHHHHTTTSCHHHHH-HHHHH---------
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHHHhC------CCCC--------HHHHHHHhCCCHHHHH-HHHHH---------
Confidence 5899999999999999999999999999983 3311 1122333333222111 11110
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhh--CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
+.+ .++.+++.+....+.+.|... ....+|||+.++|+ ++|++++
T Consensus 80 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~ 129 (243)
T 3qxg_A 80 ------------------------RELGKEATQEEIESIYHEKSILFNSY------PEAERMPGAWELLQKVKSEGLTPM 129 (243)
T ss_dssp ------------------------HHHSSCCCHHHHHHHHHHHHHHHHTS------SCCCBCTTHHHHHHHHHHTTCEEE
T ss_pred ------------------------HHhCCCCCHHHHHHHHHHHHHHHHhc------ccCCCCCCHHHHHHHHHHcCCcEE
Confidence 111 124555555555555554332 24689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCC--ceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCC
Q 024375 157 IVTSNQSRFVETLLRELAGVTITP--DRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f--~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
|+||++...+...|+ . |+..+| +.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++ +|
T Consensus 130 i~t~~~~~~~~~~l~-~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG 203 (243)
T 3qxg_A 130 VVTGSGQLSLLERLE-H-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHK----AG 203 (243)
T ss_dssp EECCCCCHHHHTTHH-H-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHH----TT
T ss_pred EEeCCcHHHHHHHHH-H-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CC
Confidence 999999999999999 6 999999 8899865 2499999999999999999999999999999999999 89
Q ss_pred CcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++|+|.||+...+++... .|++++.++.+|...|
T Consensus 204 ~~~i~v~~~~~~~~~l~~~--~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 204 IFTIAVNTGPLDGQVLLDA--GADLLFPSMQTLCDSW 238 (243)
T ss_dssp CEEEEECCSSSCHHHHHHT--TCSEEESCHHHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHhc--CCCEEECCHHHHHHHH
Confidence 9999999999988877664 5789999999997765
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-29 Score=212.41 Aligned_cols=204 Identities=13% Similarity=0.032 Sum_probs=154.0
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..++..++++++ ++.. .+..+...|......+ ...+
T Consensus 23 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~---------- 77 (247)
T 3dv9_A 23 LKAVLFDMDGVLFDSMPNHAESWHKIMKRFG------FGLS--------REEAYMHEGRTGASTI-NIVS---------- 77 (247)
T ss_dssp CCEEEEESBTTTBCCHHHHHHHHHHHHHHTT------CCCC--------HHHHHHTTTSCHHHHH-HHHH----------
T ss_pred CCEEEECCCCccCcCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHHhCCChHHHH-HHHH----------
Confidence 5899999999999999999999999999984 3311 1122333333222211 1111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
.+.++ ++.+.+.+....+.+.|... ....+|||+.++|+ ++|++++
T Consensus 78 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~ 128 (247)
T 3dv9_A 78 -----------------------RRERGHDATEEEIKAIYQAKTEEFNKC------PKAERMPGALEVLTKIKSEGLTPM 128 (247)
T ss_dssp -----------------------HHHHSSCCCHHHHHHHHHHHHHHHTTS------CCCCBCTTHHHHHHHHHHTTCEEE
T ss_pred -----------------------HHhcCCCCCHHHHHHHHHHHHHHHHhc------ccCCCCCCHHHHHHHHHHcCCcEE
Confidence 01112 24555555555555554321 34689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCC--ceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCC
Q 024375 157 IVTSNQSRFVETLLRELAGVTITP--DRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f--~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
|+||.+...+...|+ + |+..+| +.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++ +|
T Consensus 129 i~t~~~~~~~~~~l~-~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG 202 (247)
T 3dv9_A 129 VVTGSGQTSLLDRLN-H-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVA----AG 202 (247)
T ss_dssp EECSCC---CHHHHH-H-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH----TT
T ss_pred EEcCCchHHHHHHHH-h-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHH----CC
Confidence 999999999999999 6 999999 8898765 3499999999999999999999999999999999999 89
Q ss_pred CcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++|+|.||+...+++.. ..|++++.++.+|...|
T Consensus 203 ~~~i~v~~~~~~~~~l~~--~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 203 IFTIAVNTGPLHDNVLLN--EGANLLFHSMPDFNKNW 237 (247)
T ss_dssp SEEEEECCSSSCHHHHHT--TTCSEEESSHHHHHHHH
T ss_pred CeEEEEcCCCCCHHHHHh--cCCCEEECCHHHHHHHH
Confidence 999999999998877765 35889999999997655
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=209.17 Aligned_cols=124 Identities=15% Similarity=0.113 Sum_probs=110.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.++|+ ++|++++|+||++...+...+++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i 171 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL 171 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 578999999999 68999999999999999999996 99999999998764 35999999999999999999999
Q ss_pred EEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 211 FVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 211 ~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||||+. +|+.+|++ +|+.+++|.||++..+++. ....|++++.++.+|...|
T Consensus 172 ~iGD~~~~Di~~a~~----aG~~~~~v~~g~~~~~~~~-~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 172 MVGDRLYSDIYGAKR----VGMKTVWFRYGKHSERELE-YRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp EEESCTTTTHHHHHH----TTCEEEEECCSCCCHHHHT-TGGGCSEEESSTTHHHHHH
T ss_pred EECCCchHhHHHHHH----CCCEEEEECCCCCCccccc-ccCCCCEEECCHHHHHHHH
Confidence 999998 99999998 8999999999998876652 1235889999999997655
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=204.81 Aligned_cols=204 Identities=13% Similarity=0.043 Sum_probs=151.0
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||...+..+++.++++++ .+. ..+.++.+.|.+..... +.+....
T Consensus 4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g------~~~--------~~~~~~~~~g~~~~~~~--~~~~~~~----- 62 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKG------ISI--------DHLPPSFFIGGNTKQVW--ENILRDE----- 62 (214)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTT------CCC--------TTSCHHHHTTSCGGGCH--HHHHGGG-----
T ss_pred cccEEEEcCCCCccccHHHHHHHHHHHHHHcC------CCC--------CHHHHHHHcCCCHHHHH--HHHHHhh-----
Confidence 68999999999999999999999999999984 221 11344555554443322 1111100
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+. ..+.+.+ ...+++.+..... .....++||+.++|+ ++|++++|
T Consensus 63 ------~~--------------------~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i 110 (214)
T 3e58_A 63 ------YD--------------------KWDVSTL---QEEYNTYKQNNPL---PYKELIFPDVLKVLNEVKSQGLEIGL 110 (214)
T ss_dssp ------GG--------------------GSCHHHH---HHHHHHHHHHSCC---CHHHHBCTTHHHHHHHHHHTTCEEEE
T ss_pred ------cC--------------------CCCHHHH---HHHHHHHHHHhhc---ccCCCcCchHHHHHHHHHHCCCCEEE
Confidence 00 0111222 2223333322211 112368999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||.+...++..+++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++ +|+++
T Consensus 111 ~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~----aG~~~ 185 (214)
T 3e58_A 111 ASSSVKADIFRALEE-NRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA----ADVEV 185 (214)
T ss_dssp EESSCHHHHHHHHHH-TTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHH----TTCEE
T ss_pred EeCCcHHHHHHHHHH-cCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHH----CCCEE
Confidence 999999999999996 99999999999865 3599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++.+|..... ...|++++.++.+|...|
T Consensus 186 ~~~~~~~~~~~-----~~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 186 WAIRDNEFGMD-----QSAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp EEECCSSSCCC-----CTTSSEEESSGGGGGGGC
T ss_pred EEECCCCccch-----hccHHHHHHHHHHHHhhC
Confidence 99999864432 257899999999998764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=211.23 Aligned_cols=123 Identities=13% Similarity=0.108 Sum_probs=106.6
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
...+|||+.++|+ +++++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+
T Consensus 119 ~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 197 (260)
T 2gfh_A 119 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197 (260)
T ss_dssp TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 4689999999999 56799999999999999999996 99999999988754 35999999999999999999999
Q ss_pred EEcCc-HhhHHHhhccCccCCC-cEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 211 FVEDR-LATLKNVIKEPELDGW-NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 211 ~VGDs-~~Di~aa~~~~~~agi-~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||||+ .+|+++|++ +|+ .+|+|.||.... ......|++++.++.+|...|
T Consensus 198 ~vGDs~~~Di~~A~~----aG~~~~i~v~~~~~~~---~~~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 198 MVGDTLETDIQGGLN----AGLKATVWINKSGRVP---LTSSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp EEESCTTTHHHHHHH----TTCSEEEEECTTCCCC---SSCCCCCSEEESSGGGHHHHH
T ss_pred EECCCchhhHHHHHH----CCCceEEEEcCCCCCc---CcccCCCCEEECCHHHHHHHH
Confidence 99995 999999998 899 799999875431 112457899999999997654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=211.43 Aligned_cols=201 Identities=12% Similarity=0.109 Sum_probs=149.6
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.|+|+|||||||+||.+.+..++..++++++ ++.. .+.++.+.|......+ +.+
T Consensus 30 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~---------- 83 (250)
T 3l5k_A 30 VTHLIFDMDGLLLDTERLYSVVFQEICNRYD------KKYS--------WDVKSLVMGKKALEAA--QII---------- 83 (250)
T ss_dssp CSEEEEETBTTTBCHHHHHHHHHHHHHHHTT------CCCC--------HHHHHHHTTCCHHHHH--HHH----------
T ss_pred CcEEEEcCCCCcCCCHHHHHHHHHHHHHHhC------CCCC--------HHHHHHhcCCCHHHHH--HHH----------
Confidence 5899999999999999999999999999984 2211 1234555555443322 111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCC--CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
.+.+++ +.+.+. ..+++.|.+. .....++||+.++|+ ++|++++
T Consensus 84 -----------------------~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~~ 132 (250)
T 3l5k_A 84 -----------------------IDVLQLPMSKEELV---EESQTKLKEV-----FPTAALMPGAEKLIIHLRKHGIPFA 132 (250)
T ss_dssp -----------------------HHHHTCSSCHHHHH---HHHHHHHHHH-----GGGCCBCTTHHHHHHHHHHTTCCEE
T ss_pred -----------------------HHHhCCCCCHHHHH---HHHHHHHHHH-----hccCCCCCCHHHHHHHHHhCCCcEE
Confidence 111111 122222 2233333222 234689999999998 7899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC--C----CCcHHHHHHHHhcCCCCC--CcEEEEcCcHhhHHHhhccCcc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG--T----GPKVNVLKQLQKKPEHQG--LRLHFVEDRLATLKNVIKEPEL 228 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~--~----~pkp~~l~~~~~~l~~~~--~~~~~VGDs~~Di~aa~~~~~~ 228 (268)
|+||.+...+...+.+++|+..+|+.+++++ . ||+|+++..+++++|++| ++|+||||+.+|+++|++
T Consensus 133 i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~---- 208 (250)
T 3l5k_A 133 LATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALA---- 208 (250)
T ss_dssp EECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHH----
T ss_pred EEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHH----
Confidence 9999998888887753368889999999765 2 499999999999999998 999999999999999999
Q ss_pred CCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 229 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 229 agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+++++|.+|.+..+ ....|++++.++.+|...|
T Consensus 209 aG~~~i~v~~~~~~~~----~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 209 AGMQVVMVPDGNLSRD----LTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp TTCEEEECCCTTSCGG----GSTTSSEECSCGGGCCGGG
T ss_pred cCCEEEEEcCCCCchh----hcccccEeecCHHHhhHHH
Confidence 8999999999987653 3557899999999995543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=203.71 Aligned_cols=216 Identities=13% Similarity=0.136 Sum_probs=156.9
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHh---CCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVR---WPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLP 77 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~---~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~ 77 (268)
|.|+|+||+||||+|+-+.+..+...+++.+ ++. +....+..+..+. ..+... .+
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~~~~~~~~~~~--~~~~~~-~~ 58 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPK-------------------LGPVPVEHLWEIR--SRLLDE-DP 58 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTT-------------------TCSCCHHHHHHHH--HHHHHH-CG
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCc-------------------chhhHHHHHHHHH--HHHHHh-Cc
Confidence 8899999999999999988887776666665 211 0111122222211 111110 00
Q ss_pred cccccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcE
Q 024375 78 SLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRI 155 (268)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l 155 (268)
.. ..... ..+......+++.+|++.+...+....+.+.|... .....+|||+.++|+ ++.+++
T Consensus 59 ~~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~ 123 (230)
T 3vay_A 59 SF-------KHRIS---ALRRRVLFHALEDAGYDSDEAQQLADESFEVFLHG-----RHQVQIFPEVQPTLEILAKTFTL 123 (230)
T ss_dssp GG-------GGCHH---HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH-----HTCCCBCTTHHHHHHHHHTTSEE
T ss_pred cc-------cccHH---HHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHHh-----hccCccCcCHHHHHHHHHhCCeE
Confidence 00 00111 11122334566677888888777777777766543 234689999999999 444999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDG 230 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~ag 230 (268)
+|+||.+.. |+. +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+. +|+.+|++ +|
T Consensus 124 ~i~t~~~~~-----l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~----aG 193 (230)
T 3vay_A 124 GVITNGNAD-----VRR-LGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQ----AG 193 (230)
T ss_dssp EEEESSCCC-----GGG-STTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHH----TT
T ss_pred EEEECCchh-----hhh-cCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHH----CC
Confidence 999999876 675 99999999999864 35999999999999999999999999998 99999998 89
Q ss_pred CcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++++|.||+...++ ...|++++.++.+|...|
T Consensus 194 ~~~~~v~~~~~~~~~----~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 194 MRAIWYNPQGKAWDA----DRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CEEEEECTTCCCCCS----SSCCSEEESSGGGHHHHH
T ss_pred CEEEEEcCCCCCCcc----cCCCCeeECCHHHHHHHH
Confidence 999999999986544 457999999999998765
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-28 Score=209.67 Aligned_cols=202 Identities=16% Similarity=0.113 Sum_probs=152.7
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+|+...+..+++.++++++ ++... .+.++.+.|.+....+ +.+.
T Consensus 28 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~--~~~~--------- 83 (259)
T 4eek_A 28 FDAVLFDLDGVLVESEGIIAQVWQSVLAERG------LHLDL-------TEIAMYFTGQRFDGVL--AYLA--------- 83 (259)
T ss_dssp CSEEEEESBTTTEECHHHHHHHHHHHHHHTT------CCCCH-------HHHHHHTTTCCHHHHH--HHHH---------
T ss_pred CCEEEECCCCCcccCHHHHHHHHHHHHHHhC------CCCCH-------HHHHHHHhCCCHHHHH--HHHH---------
Confidence 5899999999999999999999999999983 33111 1223444555544332 1111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
+.++ .+.+.+......+.+.+ ....++||+.++|+ ++|++++
T Consensus 84 ------------------------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~g~~~~ 130 (259)
T 4eek_A 84 ------------------------QQHDFVPPPDFLDVLETRFNAAM---------TGVTAIEGAAETLRALRAAGVPFA 130 (259)
T ss_dssp ------------------------HHHCCCCCTTHHHHHHHHHHHHH---------TTCEECTTHHHHHHHHHHHTCCEE
T ss_pred ------------------------HHcCCCCCHHHHHHHHHHHHHHh---------ccCCcCccHHHHHHHHHHCCCeEE
Confidence 1111 11122222222233322 34679999999998 6799999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCce-EecCC-----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCC
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDR-LYGLG-----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~-i~g~~-----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ag 230 (268)
|+||.+...++..+++ +|+..+|+. +++++ .||+|+++..+++++|++|++|+||||+.+|+++|++ +|
T Consensus 131 i~s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~----aG 205 (259)
T 4eek_A 131 IGSNSERGRLHLKLRV-AGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLA----AG 205 (259)
T ss_dssp EECSSCHHHHHHHHHH-TTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HT
T ss_pred EEeCCCHHHHHHHHHh-cChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----CC
Confidence 9999999999999996 999999998 88653 3499999999999999999999999999999999999 89
Q ss_pred CcEEEEecCCCC----HHHHHhcCCCCCeeecChhHHhhhc
Q 024375 231 WNLYLVDWGYNT----PKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 231 i~~i~v~wGy~~----~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++|+|.||... .+++... .|++++.++.+|...|
T Consensus 206 ~~~i~v~~g~~~~~~~~~~~~~~--~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 206 ATLWGLLVPGHPHPDGAAALSRL--GAARVLTSHAELRAAL 244 (259)
T ss_dssp CEEEEECCTTSCCSSCHHHHHHH--TCSEEECSHHHHHHHH
T ss_pred CEEEEEccCCCcccccHHHHHhc--CcchhhCCHHHHHHHH
Confidence 999999999766 6666654 4789999999997765
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-28 Score=204.03 Aligned_cols=217 Identities=13% Similarity=0.098 Sum_probs=149.7
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+||+||||+|+-+.+..+...+++.+... |.+......+......-++++|.+..... ..+
T Consensus 7 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------- 72 (234)
T 3ddh_A 7 LIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPY---GTSKEISAALFQTEMNNLQILGYGAKAFT--ISM--------- 72 (234)
T ss_dssp TCCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGG---SCHHHHHHHHHHHHHHTHHHHCSSHHHHH--HHH---------
T ss_pred cccEEEEeCCCCCccCcchHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhhhhhhcCCcchhH--HHH---------
Confidence 4799999999999999998888877666666211 21100000000000011234444433211 000
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHh--hCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCC-Cc
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEE--WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS-SR 154 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g-~~ 154 (268)
....... ..++.+.+.+....+++.+ .....+|||+.++|+ ++| ++
T Consensus 73 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~l~~~g~~~ 124 (234)
T 3ddh_A 73 --------------------VETALQISNGKIAADIIRQIVDLGKSLL--------KMPIELLPGVKETLKTLKETGKYK 124 (234)
T ss_dssp --------------------HHHHHHHTTTCCCHHHHHHHHHHHHHHT--------TCCCCBCTTHHHHHHHHHHHCCCE
T ss_pred --------------------HHHHHHHhcCCCCHHHHHHHHHHHHHHh--------hccCCcCccHHHHHHHHHhCCCeE
Confidence 0011111 1234555555544444432 234689999999998 688 99
Q ss_pred EEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcE
Q 024375 155 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNL 233 (268)
Q Consensus 155 l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~ 233 (268)
++|+||.+...+...++. +|+..+|+.+++.. +|||+++..+++++|++|++|+||||+. +|+.+|++ +|+++
T Consensus 125 ~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~-kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~----aG~~~ 198 (234)
T 3ddh_A 125 LVVATKGDLLDQENKLER-SGLSPYFDHIEVMS-DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLS----LGGYG 198 (234)
T ss_dssp EEEEEESCHHHHHHHHHH-HTCGGGCSEEEEES-CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHH----HTCEE
T ss_pred EEEEeCCchHHHHHHHHH-hCcHhhhheeeecC-CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHH----CCCeE
Confidence 999999999999999996 99999999999753 6999999999999999999999999997 99999999 89999
Q ss_pred EEE----ecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 234 YLV----DWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 234 i~v----~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
++| .||+...+. ...-|++++.++.+|...|.
T Consensus 199 v~v~~~~~~g~~~~~~---~~~~~d~v~~~l~el~~~l~ 234 (234)
T 3ddh_A 199 VHIPFEVMWKHEVTET---FAHERLKQVKRLDDLLSLLG 234 (234)
T ss_dssp EECCCCTTCCCC---C---CCCTTEEECSSGGGHHHHCC
T ss_pred EEecCCcccccCCccc---ccCCCceecccHHHHHHhcC
Confidence 999 677655432 22334999999999988764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=200.04 Aligned_cols=219 Identities=13% Similarity=0.086 Sum_probs=155.5
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCch--hhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSA--LEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~--~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
.++|+||+||||+|+...+..+++.++++++ ++.. ... +....+.+.+.... ..+..
T Consensus 5 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~------ 63 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFSRNARDTFEEVYQKYS------FDRYFDSFD------HYYTLYQRRNTELW---LEYGE------ 63 (240)
T ss_dssp CSEEEECCBTTTBCHHHHHHHHHHHHHHHTT------GGGTSSSHH------HHHHHHHHHHHHHH---HHHHT------
T ss_pred ceEEEEcCCCCCcCchhhHHHHHHHHHHHcC------CCcccCCHH------HHHHHHHHHHHHHH---HHHhc------
Confidence 6899999999999999999999999999984 3210 011 11122222111110 11110
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYI 157 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~I 157 (268)
......++. ......+++.++++.+ .....+.+.|... +.....+|||+.++|+ ++|++++|
T Consensus 64 ------~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~g~~~~i 127 (240)
T 3qnm_A 64 ------GKVTKEELN---RQRFFYPLQAVGVEDE---ALAERFSEDFFAI----IPTKSGLMPHAKEVLEYLAPQYNLYI 127 (240)
T ss_dssp ------TSSCHHHHH---HHHHHHHHHHTTCCCH---HHHHHHHHHHHHH----GGGCCCBSTTHHHHHHHHTTTSEEEE
T ss_pred ------CCCCHHHHH---HHHHHHHHHHcCCCcH---HHHHHHHHHHHHH----hhhcCCcCccHHHHHHHHHcCCeEEE
Confidence 011222211 1123344555566422 2223333333332 2234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCc
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWN 232 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~ 232 (268)
+||.+...++..++. +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+. +|+++|++ +|++
T Consensus 128 ~sn~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~----aG~~ 202 (240)
T 3qnm_A 128 LSNGFRELQSRKMRS-AGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHG----VGMH 202 (240)
T ss_dssp EECSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHH----TTCE
T ss_pred EeCCchHHHHHHHHH-cChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHH----cCCe
Confidence 999999999999996 99999999999765 35999999999999999999999999996 99999999 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 233 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++++.+|... .....|++++.++.++.+++
T Consensus 203 ~~~~~~~~~~-----~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 203 QAFYNVTERT-----VFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp EEEECCSCCC-----CCSSCCSEEESSTHHHHHHT
T ss_pred EEEEcCCCCC-----CcCCCCceEECCHHHHHHHH
Confidence 9999999861 23467999999999998765
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=205.83 Aligned_cols=216 Identities=12% Similarity=0.012 Sum_probs=158.3
Q ss_pred CcEEEEecCcccccChh-HHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~-~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.|+|+|||||||+||-. .+..+++.++++++ ++.. .+.++.+.|.+..... ...+ .
T Consensus 6 ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G------~~~~--------~~~~~~~~g~~~~~~~-~~~~-~------- 62 (267)
T 1swv_A 6 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRG------VAIT--------AEEARKPMGLLKIDHV-RALT-E------- 62 (267)
T ss_dssp CCEEEECSBTTTBSTTCCTTHHHHHHHHHTTT------CCCC--------HHHHHTTTTSCHHHHH-HHHH-H-------
T ss_pred ceEEEEecCCCEEeCCCccHHHHHHHHHHHcC------CCCC--------HHHHHHHhccchHHHH-HHhc-c-------
Confidence 58999999999999988 78888989998883 3311 1345666776544332 1211 1
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (268)
+ ... ...+...++ ++.+.+......+++.|... +.....+|||+.++|+ ++|+++
T Consensus 63 ------~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~ 122 (267)
T 1swv_A 63 ------M---PRI-------ASEWNRVFRQLPTEADIQEMYEEFEEILFAI----LPRYASPINGVKEVIASLRERGIKI 122 (267)
T ss_dssp ------S---HHH-------HHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH----GGGGCCBCTTHHHHHHHHHHTTCEE
T ss_pred ------c---HHH-------HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh----hccccccCccHHHHHHHHHHcCCeE
Confidence 0 000 011112222 34455555555555554332 2334678999999998 689999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCC-ceEecCC----CCCcHHHHHHHHhcCCCCC-CcEEEEcCcHhhHHHhhccCccC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f-~~i~g~~----~~pkp~~l~~~~~~l~~~~-~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
+|+||++...+..++++ +|+..+| +.+++.+ .+|||+.+..+++++|+++ ++|+||||+.+|+.+|++ |
T Consensus 123 ~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~----a 197 (267)
T 1swv_A 123 GSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRN----A 197 (267)
T ss_dssp EEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHH----T
T ss_pred EEEcCCCHHHHHHHHHH-cCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHH----C
Confidence 99999999999999996 8988886 8888765 3499999999999999999 999999999999999998 8
Q ss_pred CCcEEEEecCCCC-----------------------HHHHHhcCCCCCeeecChhHHhhhc
Q 024375 230 GWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 230 gi~~i~v~wGy~~-----------------------~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+++++|.||++. .+++... .|++++.++.+|...|
T Consensus 198 G~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ad~v~~~~~el~~~l 256 (267)
T 1swv_A 198 GMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVEN--GAHFTIETMQELESVM 256 (267)
T ss_dssp TSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHT--TCSEEESSGGGHHHHH
T ss_pred CCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhc--CCceeccCHHHHHHHH
Confidence 9999999999873 3444443 5889999999997655
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=200.79 Aligned_cols=216 Identities=15% Similarity=0.124 Sum_probs=151.1
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.++++++ ++... ...+.+.+.+... ...+..
T Consensus 7 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~--------~~~~~~~~~~~~~---~~~~~~-------- 61 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQAAEALALRLLFEDQN------IPLTN--------DMKAQYKTINQGL---WRAFEE-------- 61 (238)
T ss_dssp CCEEEECCBTTTBCHHHHHHHHHHHHHHHTT------CCCCH--------HHHHHHHHHHHHH---HHHHHT--------
T ss_pred CCEEEEcCcCcCcCCchhHHHHHHHHHHHcC------CCcch--------HHHHHHHHHHHHH---HHHHHh--------
Confidence 5899999999999999999999999999984 33210 1112222211111 011111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
......+.. ......+.+.+++... .......|++.+ .....+|||+.++|+ ++ ++++|+
T Consensus 62 ----~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~l~~~-~~~~i~ 124 (238)
T 3ed5_A 62 ----GKMTRDEVV---NTRFSALLKEYGYEAD-GALLEQKYRRFL--------EEGHQLIDGAFDLISNLQQQ-FDLYIV 124 (238)
T ss_dssp ----TSSCHHHHH---HHHHHHHHHHTTCCCC-HHHHHHHHHHHH--------TTCCCBCTTHHHHHHHHHTT-SEEEEE
T ss_pred ----ccCCHHHHH---HHHHHHHHHHcCCCCc-HHHHHHHHHHHH--------HhcCCCCccHHHHHHHHHhc-CeEEEE
Confidence 011122111 1112233444444311 111122222222 223689999999999 55 999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCC-CCCCcEEEEcCcH-hhHHHhhccCccCCCc
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPE-HQGLRLHFVEDRL-ATLKNVIKEPELDGWN 232 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~-~~~~~~~~VGDs~-~Di~aa~~~~~~agi~ 232 (268)
||++...++..+++ +|+..+|+.+++++ .||+|+++..+++++| ++|++|+||||+. +|+++|++ +|++
T Consensus 125 t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~----aG~~ 199 (238)
T 3ed5_A 125 TNGVSHTQYKRLRD-SGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQL----AGLD 199 (238)
T ss_dssp ECSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHH----TTCE
T ss_pred eCCCHHHHHHHHHH-cChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHH----CCCE
Confidence 99999999999996 99999999999764 3599999999999999 9999999999998 99999998 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 233 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
+|+|.+|..... ....|++++.++.+|...|+
T Consensus 200 ~i~~~~~~~~~~----~~~~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 200 TCWMNPDMKPNV----PEIIPTYEIRKLEELYHILN 231 (238)
T ss_dssp EEEECTTCCCCT----TCCCCSEEESSGGGHHHHHT
T ss_pred EEEECCCCCCCc----ccCCCCeEECCHHHHHHHHH
Confidence 999999965432 34578999999999987763
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=199.50 Aligned_cols=206 Identities=14% Similarity=0.081 Sum_probs=151.5
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+|+...+..++..++++++ .+... .+.++.++|.+..... ...+ .
T Consensus 6 ~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~-~~~~-~-------- 62 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSSRGIVTCFRSVLERHG------YTGIT-------DDMIKRTIGKTLEESF-SILT-G-------- 62 (225)
T ss_dssp CSEEEECCBTTTEECHHHHHHHHHHHHHHTT------CCCCC-------HHHHHTTTTSCHHHHH-HHHH-C--------
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHHHHHHHhC------CCCCC-------HHHHHHHhCCcHHHHH-HHHc-C--------
Confidence 6899999999999999999999999999884 22110 1234455665544332 1111 1
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
.. +..........+...|.. .+.....++||+.++|+ ++|++++|+
T Consensus 63 ------~~---------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~g~~~~i~ 111 (225)
T 3d6j_A 63 ------IT---------------------DADQLESFRQEYSKEADI----YMNANTILFPDTLPTLTHLKKQGIRIGII 111 (225)
T ss_dssp ------CC---------------------CHHHHHHHHHHHHHHHHH----HTGGGCEECTTHHHHHHHHHHHTCEEEEE
T ss_pred ------CC---------------------CHHHHHHHHHHHHHHHHH----hccccCccCcCHHHHHHHHHHCCCeEEEE
Confidence 00 111112222223333322 22334578999999998 689999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||.+...+...+++ +|+..+|+.+++.+ .+|+|+++..+++++|++++++++|||+.+|+.++++ +|++++
T Consensus 112 s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~----aG~~~~ 186 (225)
T 3d6j_A 112 STKYRFRILSFLRN-HMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA----AGVSFT 186 (225)
T ss_dssp CSSCHHHHHHHHHT-SSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEEE
T ss_pred ECCCHHHHHHHHHH-cCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----CCCeEE
Confidence 99999999999995 99999999998754 3488999999999999999999999999999999998 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
+|.||++..+++... .|++++.++.+|...|+
T Consensus 187 ~~~~~~~~~~~l~~~--~ad~v~~~~~el~~~l~ 218 (225)
T 3d6j_A 187 GVTSGMTTAQEFQAY--PYDRIISTLGQLISVPE 218 (225)
T ss_dssp EETTSSCCTTGGGGS--CCSEEESSGGGGC----
T ss_pred EECCCCCChHHHhhc--CCCEEECCHHHHHHhhh
Confidence 999999877666543 47899999999977653
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=202.43 Aligned_cols=201 Identities=16% Similarity=0.120 Sum_probs=140.9
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.++++++ ++.. .+.++.+.|.+....+ ...+...
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~-~~~~~~~------- 59 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQID------IPFD--------RDMNERLKGISREESL-ESILIFG------- 59 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHTT------CCCC--------HHHHHHTTTCCHHHHH-HHHHHHT-------
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHHcCCCHHHHH-HHHHHHh-------
Confidence 4899999999999999999999999999884 3311 1345566666544432 1111100
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
+. ...++.+.+......+.+.|.+.... .....+|||+.++|+ ++|++++|+
T Consensus 60 -----~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~ 114 (233)
T 3nas_A 60 -----GA------------------ETKYTNAEKQELMHRKNRDYQMLISK--LTPEDLLPGIGRLLCQLKNENIKIGLA 114 (233)
T ss_dssp -----TC------------------TTTSCHHHHHHHHHHHHHHHHHHHHT--CCGGGSCTTHHHHHHHHHHTTCEEEEC
T ss_pred -----CC------------------CCCCCHHHHHHHHHHHHHHHHHHHhh--cCcCCcCcCHHHHHHHHHHCCCcEEEE
Confidence 00 00123444444455555555433211 111348999999999 789999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||++. +..++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++ +|+.++
T Consensus 115 t~~~~--~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~----aG~~~~ 187 (233)
T 3nas_A 115 SSSRN--APKILRR-LAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS----AGMFAV 187 (233)
T ss_dssp CSCTT--HHHHHHH-TTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHH----TTCEEE
T ss_pred cCchh--HHHHHHH-cCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH----cCCEEE
Confidence 99866 8889996 99999999999876 2488999999999999999999999999999999999 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
++.+. +++. .|++++.++.++.
T Consensus 188 ~~~~~----~~~~----~ad~v~~s~~el~ 209 (233)
T 3nas_A 188 GVGQG----QPML----GADLVVRQTSDLT 209 (233)
T ss_dssp ECC---------------CSEECSSGGGCC
T ss_pred EECCc----cccc----cCCEEeCChHhCC
Confidence 88654 3333 5889999998873
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=203.23 Aligned_cols=192 Identities=12% Similarity=0.106 Sum_probs=143.9
Q ss_pred CcEEEEecCcccccChhHHHHHH-HHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSA-VKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~-~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.++|+|||||||+||.+.+..++ +.++++++ .+. ..++.+.|......+ ...+
T Consensus 25 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g------~~~----------~~~~~~~g~~~~~~~-~~~~--------- 78 (231)
T 3kzx_A 25 PTAVIFDWYNTLIDTSINIDRTTFYQVLDQMG------YKN----------IDLDSIPNSTIPKYL-ITLL--------- 78 (231)
T ss_dssp CSEEEECTBTTTEETTSSCCHHHHHHHHHHTT------CCC----------CCCTTSCTTTHHHHH-HHHH---------
T ss_pred CCEEEECCCCCCcCCchhHHHHHHHHHHHHcC------CCH----------HHHHHHhCccHHHHH-HHHh---------
Confidence 58999999999999999999999 99999983 221 244455555443322 1111
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+.. .......+++.+.. ........++||+.++|+ ++|++++|
T Consensus 79 ------~~~-------------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~g~~~~i 124 (231)
T 3kzx_A 79 ------GKR-------------------------WKEATILYENSLEK---SQKSDNFMLNDGAIELLDTLKENNITMAI 124 (231)
T ss_dssp ------GGG-------------------------HHHHHHHHHHHHHH---CCSCCCCEECTTHHHHHHHHHHTTCEEEE
T ss_pred ------Cch-------------------------HHHHHHHHHHHHhh---hcccccceECcCHHHHHHHHHHCCCeEEE
Confidence 000 01112233444330 122345689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCC-cEEEEcCcHhhHHHhhccCccCCCc
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL-RLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~-~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
+||.+...++..+++ +|+..+|+.+++++ .||+|+++..+++++|++|+ +++||||+.+|+++|++ +|+.
T Consensus 125 ~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~----aG~~ 199 (231)
T 3kzx_A 125 VSNKNGERLRSEIHH-KNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIE----AGCL 199 (231)
T ss_dssp EEEEEHHHHHHHHHH-TTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHH----TTCE
T ss_pred EECCCHHHHHHHHHH-CCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHH----CCCe
Confidence 999999999999996 99999999999865 24999999999999999999 99999999999999999 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 233 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|++..+.. ..|++.+.++.+|...|
T Consensus 200 ~v~~~~~~~---------~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 200 PIKYGSTNI---------IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp EEEECC--------------CCEEESSHHHHHHHH
T ss_pred EEEECCCCC---------CCCceeeCCHHHHHHHH
Confidence 998844421 35789999999997765
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=6e-27 Score=197.17 Aligned_cols=205 Identities=15% Similarity=0.097 Sum_probs=149.3
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+|+-..+..+...++++++ .+.. ..+.++.+.|....... ...+..
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~-~~~~~~------- 66 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLG------VDIS-------RRNELPDTLGLRIDMVV-DLWYAR------- 66 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTT------CCGG-------GGGGSCCCTTCCHHHHH-HHHHHH-------
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcC------CCCC-------hHHHHHHHhCCCHHHHH-HHHHHH-------
Confidence 36899999999999999999889888999883 3311 01345555665543322 122111
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.+++.....+....+++.|.+.+ .....++||+.++|+ ++|++++|
T Consensus 67 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~g~~~~i 115 (226)
T 1te2_A 67 ---------------------------QPWNGPSRQEVVERVIARAISLV----EETRPLLPGVREAVALCKEQGLLVGL 115 (226)
T ss_dssp ---------------------------SCCSSSCHHHHHHHHHHHHHHHH----HHHCCBCTTHHHHHHHHHHTTCEEEE
T ss_pred ---------------------------cCCCccCHHHHHHHHHHHHHHHH----hccCCcCccHHHHHHHHHHCCCcEEE
Confidence 01100001111122222222211 123578999999998 68999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||.+...++..+++ +|+..+|+.+++.+ .||+|+.+..+++++|++++++++|||+.+|+.+|++ +|+.+
T Consensus 116 ~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~----aG~~~ 190 (226)
T 1te2_A 116 ASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKA----ARMRS 190 (226)
T ss_dssp EESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH----TTCEE
T ss_pred EeCCcHHHHHHHHHh-cCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----cCCEE
Confidence 999999999999996 99999999998765 2488999999999999999999999999999999998 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
++|.||++..++.. ..|++++.++.+|..
T Consensus 191 ~~~~~~~~~~~~~~---~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 191 IVVPAPEAQNDPRF---VLANVKLSSLTELTA 219 (226)
T ss_dssp EECCCTTTTTCGGG---GGSSEECSCGGGCCH
T ss_pred EEEcCCCCcccccc---cccCeEECCHHHHhH
Confidence 99999987654433 357899999998854
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-27 Score=201.87 Aligned_cols=222 Identities=12% Similarity=0.047 Sum_probs=152.8
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.|+|+||+||||+|+.+.+..+++.++++++ ++... .+..+.+.+..... . .+..... .+
T Consensus 15 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-------~~~~~~~~~~~~~~-~-~~~~~~~-~~---- 74 (254)
T 3umg_A 15 VRAVLFDTFGTVVDWRTGIATAVADYAARHQ------LEVDA-------VAFADRWRARYQPS-M-DAILSGA-RE---- 74 (254)
T ss_dssp CCEEEECCBTTTBCHHHHHHHHHHHHHHHTT------CCCCH-------HHHHHHHHTTHHHH-H-HHHHTTS-SC----
T ss_pred ceEEEEeCCCceecCchHHHHHHHHHHHHhc------CCCCH-------HHHHHHHHHhHHHH-H-HHHHhcC-CC----
Confidence 5899999999999999999999999999984 33211 12233444432111 1 1222110 00
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEc
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVT 159 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvT 159 (268)
..... ..+......+.+.++++.+.+. ....+.+... .....+|||+.++|+ +++++++|+|
T Consensus 75 -----~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~i~t 138 (254)
T 3umg_A 75 -----FVTLD---ILHRENLDFVLRESGIDPTNHD---SGELDELARA-----WHVLTPWPDSVPGLTAIKAEYIIGPLS 138 (254)
T ss_dssp -----CCCHH---HHHHHHHHHHHHHTTCCGGGSC---HHHHHHHHGG-----GGSCCBCTTHHHHHHHHHHHSEEEECS
T ss_pred -----CCCHH---HHHHHHHHHHHHHhCCCcCcCC---HHHHHHHHHH-----HhhCcCCcCHHHHHHHHHhCCeEEEEe
Confidence 00111 1112222344445554210000 0011122111 134688999999998 3349999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEE
Q 024375 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
|.+...++.+++. +|+. |+.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++ +|+.+++
T Consensus 139 ~~~~~~~~~~l~~-~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~----aG~~~~~ 211 (254)
T 3umg_A 139 NGNTSLLLDMAKN-AGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHA----TGLATAF 211 (254)
T ss_dssp SSCHHHHHHHHHH-HTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH----TTCEEEE
T ss_pred CCCHHHHHHHHHh-CCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHH----CCCEEEE
Confidence 9999999999996 9986 88888754 4599999999999999999999999999999999998 8999999
Q ss_pred Ee----cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 236 VD----WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 236 v~----wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+. ||++..+++. ....|++++.++.+|...|
T Consensus 212 ~~~~~~~g~~~~~~~~-~~~~~d~~~~~~~el~~~l 246 (254)
T 3umg_A 212 ILRPVEHGPHQTDDLA-PTGSWDISATDITDLAAQL 246 (254)
T ss_dssp ECCTTTTCTTCCSCSS-CSSCCSEEESSHHHHHHHH
T ss_pred EecCCcCCCCcccccc-ccCCCceEECCHHHHHHHh
Confidence 99 9998776552 2457999999999997765
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=200.07 Aligned_cols=216 Identities=8% Similarity=0.022 Sum_probs=149.4
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.|+|+|||||||+||-+.+..+.+.++++++ .+... .....++.+ ..... ..+..
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-----~~~~~~~~~-----~~~~~-~~~~~------- 58 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISG------LHIKD-----VANAVIEVR-----NEIKK-MRAQA------- 58 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHT------CCHHH-----HHHHHHHHH-----HHHHH-HHHTT-------
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcC------CCCcH-----HHHHHHHHH-----HHHHH-Hhhhh-------
Confidence 46999999999999999999989989998883 33110 000011110 00000 00000
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.|.....+ ......+.+.++++.+........+.+.+ . . ..+|||+.++|+ ++|++++|
T Consensus 59 -----~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~-~~~~~~~~~~l~~l~~~g~~~~i 120 (235)
T 2om6_A 59 -----SEDPRKVL----TGSQEALAGKLKVDVELVKRATARAILNV----D----E-SLVLEGTKEALQFVKERGLKTAV 120 (235)
T ss_dssp -----CCCTTTHH----HHHHHHHHHHHTCCHHHHHHHHHHHHHHC----C----G-GGBCTTHHHHHHHHHHTTCEEEE
T ss_pred -----cCCCcchH----HHHHHHHHHHhCCCHHHHHHHHHHHHHhc----c----c-cCcCccHHHHHHHHHHCCCEEEE
Confidence 01111100 01122333444565544444444333332 1 1 246999999999 68999999
Q ss_pred EcCCc---hHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccC
Q 024375 158 VTSNQ---SRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELD 229 (268)
Q Consensus 158 vTnK~---~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~a 229 (268)
+||+. ...+...++. +|+..+|+.+++++ .||+|+++..+++++|++|++|++|||+. +|+++|++ +
T Consensus 121 ~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~----a 195 (235)
T 2om6_A 121 IGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARK----V 195 (235)
T ss_dssp EECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHH----T
T ss_pred EcCCcccchhHHHHHHHh-CCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHH----C
Confidence 99999 9999999996 99999999998754 45999999999999999999999999999 99999998 8
Q ss_pred CCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 230 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 230 gi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+.++++.|| +...++. ..|++++.++.+|...|
T Consensus 196 G~~~~~~~~~-~~~~~~~---~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 196 GMWAVWINQE-GDKVRKL---EERGFEIPSIANLKDVI 229 (235)
T ss_dssp TSEEEEECTT-CCSCEEE---ETTEEEESSGGGHHHHH
T ss_pred CCEEEEECCC-CCCcccC---CCCcchHhhHHHHHHHH
Confidence 9999999999 4433322 34789999999997665
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-27 Score=202.28 Aligned_cols=124 Identities=14% Similarity=0.170 Sum_probs=105.2
Q ss_pred cCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
....+|||+.++|+ ++|++++|+||++...+...++. +|+..+|+.+++. .+|+|+++..+++++|++|++|+|||
T Consensus 109 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~-~kp~~~~~~~~~~~l~~~~~~~i~iG 186 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQ-SGLSDLFPRIEVV-SEKDPQTYARVLSEFDLPAERFVMIG 186 (251)
T ss_dssp CCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHH-HSGGGTCCCEEEE-SCCSHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCcHHhCceeeee-CCCCHHHHHHHHHHhCcCchhEEEEC
Confidence 34679999999999 68999999999999999999996 9999999999874 36999999999999999999999999
Q ss_pred CcH-hhHHHhhccCccCCCcEEEEecCCCCHH---H-HHhcCCCCCe-eecChhHHhhhc
Q 024375 214 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPK---E-RAEAASMPRI-QLLQLSDFCTKL 267 (268)
Q Consensus 214 Ds~-~Di~aa~~~~~~agi~~i~v~wGy~~~~---e-l~~~~~~P~~-~~~~~~~~~~~~ 267 (268)
|+. +|+.+|++ +|+++++|.||+.... + +. ...|++ ++.++.+|...|
T Consensus 187 D~~~~Di~~a~~----aG~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 187 NSLRSDVEPVLA----IGGWGIYTPYAVTWAHEQDHGVA--ADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp SCCCCCCHHHHH----TTCEEEECCCC---------------CCTTEEECSSGGGHHHHH
T ss_pred CCchhhHHHHHH----CCCEEEEECCCCccccccccccc--cCCCCeeeeCCHHHHHHHH
Confidence 999 99999998 8999999999986422 1 22 347888 999999997665
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-27 Score=201.61 Aligned_cols=218 Identities=12% Similarity=0.029 Sum_probs=152.9
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+|+...+..++..++++++ ++... . +..+.+++... ..+ ...+.. ..+
T Consensus 21 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-~------~~~~~~~~~~~-~~~-~~~~~~-~~~--- 81 (254)
T 3umc_A 21 GMRAILFDVFGTLVDWRSSLIEQFQALERELG------GTLPC-V------ELTDRWRQQYK-PAM-DRVRNG-QAP--- 81 (254)
T ss_dssp SCCEEEECCBTTTEEHHHHHHHHHHHHHHHSS------SCCCH-H------HHHHHHHHHTH-HHH-HHHHTT-SSC---
T ss_pred CCcEEEEeCCCccEecCccHHHHHHHHHHHhc------CCCCH-H------HHHHHHHHHHH-HHH-HHHhcc-cCC---
Confidence 36899999999999999999999999999984 32111 0 12233333211 111 122211 000
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCC--CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIY 156 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~ 156 (268)
..... ..+......+.+.++. +.+. .+.+... .....+|||+.++|+ +++++++
T Consensus 82 ------~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~ 139 (254)
T 3umc_A 82 ------WQHLD---QLHRQSLEALAGEFGLALDEAL--------LQRITGF-----WHRLRPWPDTLAGMHALKADYWLA 139 (254)
T ss_dssp ------CCCHH---HHHHHHHHHHHHHTTCCCCHHH--------HHHHHGG-----GGSCEECTTHHHHHHHHTTTSEEE
T ss_pred ------cccHH---HHHHHHHHHHHHHhCCCCCHHH--------HHHHHHH-----HhcCCCCccHHHHHHHHHhcCeEE
Confidence 00111 1112223344445544 2221 1111111 234578999999999 5569999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|+||.+...+..+++. +|+. |+.+++++ .||||+++..+++++|++|++|+||||+.+|+++|++ +|+.
T Consensus 140 i~s~~~~~~~~~~l~~-~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~----aG~~ 212 (254)
T 3umc_A 140 ALSNGNTALMLDVARH-AGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARA----LGLK 212 (254)
T ss_dssp ECCSSCHHHHHHHHHH-HTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHH----TTCE
T ss_pred EEeCCCHHHHHHHHHH-cCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHH----CCCe
Confidence 9999999999999996 9985 89988765 3599999999999999999999999999999999998 8999
Q ss_pred EEEEe----cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 233 LYLVD----WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 233 ~i~v~----wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++++. ||++..+++. ....|++++.++.+|...|
T Consensus 213 ~~~~~~~~~~g~~~~~~l~-~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 213 TAFIARPLEYGPGQSQDLA-AEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp EEEECCTTTTCTTCCSSSS-CSSCCSEEESSHHHHHHHH
T ss_pred EEEEecCCccCCCCCcccc-cCCCCcEEECCHHHHHHHh
Confidence 99999 9998776651 2457999999999998765
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=203.21 Aligned_cols=121 Identities=17% Similarity=0.155 Sum_probs=107.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
...+|||+.++|+ ++ ++++|+||++...+...++. +|+..+|+.+++++ .||+|+++..+++++|++|++|
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 4689999999999 56 99999999999999999996 99999999999864 4699999999999999999999
Q ss_pred EEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 210 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 210 ~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+||||+. +|+.+|++ +|+++++|.||....+ ... .|++++.++.+|...|
T Consensus 176 ~~vGD~~~~Di~~a~~----aG~~~~~v~~~~~~~~-~~~---~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKN----LGMTSILLDRKGEKRE-FWD---KCDFIVSDLREVIKIV 226 (234)
T ss_dssp EEEESCTTTTHHHHHT----TTCEEEEECSSSTTGG-GGG---GCSEEESSTHHHHHHH
T ss_pred EEEcCCcHHHHHHHHH----cCCEEEEECCCCCccc-ccc---CCCEeeCCHHHHHHHH
Confidence 9999998 99999998 8999999999965543 332 6889999999997765
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=193.74 Aligned_cols=195 Identities=15% Similarity=0.144 Sum_probs=144.5
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhccccccccc-chhhHHHHHHHHHhcccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVE-TGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg-~G~~~~~~~~~l~~~~~~~~ 79 (268)
|.++|+|||||||+|+-+.+..+...++++++ ++.. ...++.+.| .+..... +.+.
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~~--~~~~------- 59 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFS------IPYD--------KEKVREFIFKYSVQDLL--VRVA------- 59 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHT------CCCC--------HHHHHHHHHHSCHHHHH--HHHH-------
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcC------CCCC--------HHHHHHHHccccHHHHH--HHhh-------
Confidence 47999999999999999999999988988883 2211 123344444 3222211 1110
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
..++++. .....+...+.+. ......++||+.++|+ ++|++++
T Consensus 60 --------------------------~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~ 105 (207)
T 2go7_A 60 --------------------------EDRNLDV----EVLNQVRAQSLAE----KNAQVVLMPGAREVLAWADESGIQQF 105 (207)
T ss_dssp --------------------------HHHTCCH----HHHHHHHHHHHTT----CGGGCEECTTHHHHHHHHHHTTCEEE
T ss_pred --------------------------chhhccH----HHHHHHHHHHHHh----ccccceeCcCHHHHHHHHHHCCCeEE
Confidence 0111111 1122233333222 2234578999999999 6899999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|+||....... .++. +|+..+|+.+++.+ .||+|+++..+++++|++|+++++|||+.+|+.+|++ +|++
T Consensus 106 i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~----aG~~ 179 (207)
T 2go7_A 106 IYTHKGNNAFT-ILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQN----SGIQ 179 (207)
T ss_dssp EECSSCTHHHH-HHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCE
T ss_pred EEeCCchHHHH-HHHH-cCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHH----CCCe
Confidence 99999999999 9995 99999999988754 3488999999999999999999999999999999998 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 233 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
++++.||+ . .|++++.++.+|...|+
T Consensus 180 ~i~~~~~~-~---------~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 180 SINFLEST-Y---------EGNHRIQALADISRIFE 205 (207)
T ss_dssp EEESSCCS-C---------TTEEECSSTTHHHHHTS
T ss_pred EEEEecCC-C---------CCCEEeCCHHHHHHHHh
Confidence 99999997 4 47899999999987764
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-27 Score=204.61 Aligned_cols=203 Identities=17% Similarity=0.142 Sum_probs=139.1
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchh-hHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGY-DTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~-~~~~~~~~l~~~~~~~~~ 80 (268)
.++|+|||||||+||.+.+..+++.+++++ |++.. .......+.++.++|... ...+ .+.. .
T Consensus 11 ~k~viFDlDGTL~ds~~~~~~~~~~~~~~~------g~~~~--~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~------- 73 (231)
T 2p11_A 11 DIVFLFDCDNTLLDNDHVLADLRAHMMREF------GAQNS--ARYWEIFETLRTELGYADYLGAL-QRYR-L------- 73 (231)
T ss_dssp SEEEEECCBTTTBCHHHHHHHHHHHHHHHH------CHHHH--HHHHHHHHHHHHHC-CCCHHHHH-HHHH-H-------
T ss_pred CeEEEEcCCCCCEecHHHHHHHHHHHHHHc------CCCcc--hHHHHHHHHHHHhcCchHHHHHH-HHHH-h-------
Confidence 479999999999999999999999999998 33311 001011233444444321 1110 0100 0
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
.+.. + .....+++.|... .....+|||+.++|+ ++| +++|
T Consensus 74 --------------------------~~~~--~---~~~~~~~~~~~~~-----~~~~~~~~g~~~~l~~l~~~g-~~~i 116 (231)
T 2p11_A 74 --------------------------EQPR--D---TRLLLMSSFLIDY-----PFASRVYPGALNALRHLGARG-PTVI 116 (231)
T ss_dssp --------------------------HCTT--C---TGGGGGHHHHHHC-----CGGGGBCTTHHHHHHHHHTTS-CEEE
T ss_pred --------------------------cccc--c---hHHHHHHHHHHHH-----HHhCCcCccHHHHHHHHHhCC-CEEE
Confidence 0000 0 0001122222221 223579999999999 678 9999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHh---hHHHhhccCccCCCcEE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA---TLKNVIKEPELDGWNLY 234 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~---Di~aa~~~~~~agi~~i 234 (268)
+||++...++..|++ +|+..+|+.+++. ..+||..+..+++ +++|++|+||||+.+ |+.+|++ ||+++|
T Consensus 117 ~Tn~~~~~~~~~l~~-~gl~~~f~~~~~~-~~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~----aG~~~i 188 (231)
T 2p11_A 117 LSDGDVVFQPRKIAR-SGLWDEVEGRVLI-YIHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWG----ARLTTV 188 (231)
T ss_dssp EEECCSSHHHHHHHH-TTHHHHTTTCEEE-ESSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHG----GGEEEE
T ss_pred EeCCCHHHHHHHHHH-cCcHHhcCeeEEe-cCChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHH----cCCeEE
Confidence 999999999999996 9999888876542 1367887877776 789999999999999 9999998 899999
Q ss_pred EEecCCC--CHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 235 LVDWGYN--TPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 235 ~v~wGy~--~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|.||+. ..+++...+ .|++++.++++|...|
T Consensus 189 ~v~~g~~~~~~~~l~~~~-~~~~~i~~~~el~~~l 222 (231)
T 2p11_A 189 FPRQGHYAFDPKEISSHP-PADVTVERIGDLVEMD 222 (231)
T ss_dssp EECCSSSSSCHHHHHHSC-CCSEEESSGGGGGGCG
T ss_pred EeCCCCCCCcchhccccC-CCceeecCHHHHHHHH
Confidence 9999974 455565431 3889999999997665
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=197.40 Aligned_cols=122 Identities=14% Similarity=0.177 Sum_probs=109.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.++|+ ++|++++|+||++...++.+|++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 172 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL 172 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 578999999998 78999999999999999999996 99999999999865 35999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||||+.+|+.+|++ +|+++++|.||....++ ....|++++.++.+|...|
T Consensus 173 ~iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~el~~~l 222 (232)
T 1zrn_A 173 FVASNAWDATGARY----FGFPTCWINRTGNVFEE---MGQTPDWEVTSLRAVVELF 222 (232)
T ss_dssp EEESCHHHHHHHHH----HTCCEEEECTTCCCCCS---SSCCCSEEESSHHHHHTTC
T ss_pred EEeCCHHHHHHHHH----cCCEEEEEcCCCCCccc---cCCCCCEEECCHHHHHHHH
Confidence 99999999999998 89999999999765432 2457899999999997765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=196.34 Aligned_cols=122 Identities=11% Similarity=0.119 Sum_probs=110.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.++|+ ++|++++|+||.+...+...+++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL 176 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence 578999999999 78999999999999999999995 99999999999865 35999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||||+.+|+.+|++ +|+.+++|.||....+++ ...|++++.++.+|...|
T Consensus 177 ~vGD~~~Di~~a~~----~G~~~~~v~~~~~~~~~~---~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 177 FVSSNGWDACGATW----HGFTTFWINRLGHPPEAL---DVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp EEESCHHHHHHHHH----HTCEEEEECTTCCCCCSS---SCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHHHHHHH----cCCEEEEEcCCCCCchhc---cCCCCEEECCHHHHHHHH
Confidence 99999999999998 899999999998765544 457999999999998765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-26 Score=190.23 Aligned_cols=198 Identities=17% Similarity=0.156 Sum_probs=143.1
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.|+|+|||||||+||-+.+..+...++++++ .+... ...++.+.|......+ ...+
T Consensus 1 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~-~~~~--------- 57 (221)
T 2wf7_A 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIG------INGVD-------RQFNEQLKGVSREDSL-QKIL--------- 57 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTT------CCCCS-------HHHHTTTTTCCHHHHH-HHHH---------
T ss_pred CCcEEEECCCCcccCChHHHHHHHHHHHHHcC------CCCCC-------HHHHHHhCCCCHHHHH-HHHH---------
Confidence 78999999999999999999999999998883 22000 1234445554433221 1111
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (268)
+.++ ++.+...+....+++.|...... .....++||+.++|+ ++|+++
T Consensus 58 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~ 110 (221)
T 2wf7_A 58 -------------------------DLADKKVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSNKIKI 110 (221)
T ss_dssp -------------------------HHTTCCCCHHHHHHHHHHHHHHHHHHGGG--CCGGGBCTTHHHHHHHHHHTTCEE
T ss_pred -------------------------HHhCCCCChHHHHHHHHHHHHHHHHHHhh--ccCCCCCCCHHHHHHHHHHCCCeE
Confidence 1111 23344444444444444432211 113468999999998 689999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi 231 (268)
+|+||+ ..+...+++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+++|++ +|+
T Consensus 111 ~i~t~~--~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~----aG~ 183 (221)
T 2wf7_A 111 ALASAS--KNGPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD----SGA 183 (221)
T ss_dssp EECCCC--TTHHHHHHH-TTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTC
T ss_pred EEEcCc--HHHHHHHHH-cChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHH----CCC
Confidence 999999 556788995 99999999998765 3488999999999999999999999999999999998 899
Q ss_pred cEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 232 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 232 ~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
.++++ +..++++ .|++++.++.++
T Consensus 184 ~~~~~----~~~~~~~----~a~~v~~~~~el 207 (221)
T 2wf7_A 184 LPIGV----GRPEDLG----DDIVIVPDTSHY 207 (221)
T ss_dssp EEEEE----SCHHHHC----SSSEEESSGGGC
T ss_pred EEEEE----CCHHHhc----cccchhcCHHhC
Confidence 88887 3344443 578999999886
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-26 Score=201.14 Aligned_cols=224 Identities=14% Similarity=0.170 Sum_probs=152.8
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
|+|+||+||||+|+...+..++..++++++ ++.. . +.++...+.....+. ..+.. -
T Consensus 2 k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~-~-------~~~~~~~~~~~~~~~--~~~~~-----~--- 57 (263)
T 3k1z_A 2 RLLTWDVKDTLLRLRHPLGEAYATKARAHG------LEVE-P-------SALEQGFRQAYRAQS--HSFPN-----Y--- 57 (263)
T ss_dssp CEEEECCBTTTEEESSCHHHHHHHHHHHTT------CCCC-H-------HHHHHHHHHHHHHHH--HHSTG-----G---
T ss_pred cEEEEcCCCceeCCCCCHHHHHHHHHHHhC------CCCC-H-------HHHHHHHHHHHHHhh--hhccc-----c---
Confidence 799999999999999888888988888884 3211 1 112221221111110 00000 0
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCC-CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
....|....+. |..+....+...|. +.+.+.+....+...|... ....+|||+.++|+ ++|++++|+
T Consensus 58 ~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~ 128 (263)
T 3k1z_A 58 GLSHGLTSRQW---WLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHP------CTWQVLDGAEDTLRECRTRGLRLAVI 128 (263)
T ss_dssp GGGGTCCHHHH---HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSG------GGEEECTTHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCHHHH---HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhcCc------ccceECcCHHHHHHHHHhCCCcEEEE
Confidence 00012222211 11222334444444 4444444444444333211 12479999999999 789999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNL 233 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~ 233 (268)
||.+.. +..+|++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+. +|+++|++ +|+.+
T Consensus 129 tn~~~~-~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~----aG~~~ 202 (263)
T 3k1z_A 129 SNFDRR-LEGILGG-LGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRA----VGMHS 202 (263)
T ss_dssp ESCCTT-HHHHHHH-TTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHT----TTCEE
T ss_pred eCCcHH-HHHHHHh-CCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHH----CCCEE
Confidence 998875 6899996 99999999999864 45999999999999999999999999997 99999998 89999
Q ss_pred EEEecCCCCHH-HHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPK-ERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~-el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+++.||..... ++.. ..|++++.++.+|...|
T Consensus 203 i~~~~~~~~~~~~~~~--~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 203 FLVVGPQALDPVVRDS--VPKEHILPSLAHLLPAL 235 (263)
T ss_dssp EEECCSSCCCHHHHHH--SCGGGEESSGGGHHHHH
T ss_pred EEEcCCCCCchhhccc--CCCceEeCCHHHHHHHH
Confidence 99999986543 3443 36889999999997765
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=205.42 Aligned_cols=121 Identities=12% Similarity=0.103 Sum_probs=104.2
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc---CCCCCCceEecCC--CCCcHHHHHHHHhcCCCCCC
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLG--TGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~---gl~~~f~~i~g~~--~~pkp~~l~~~~~~l~~~~~ 207 (268)
....+|||+.++|+ ++|++++|+||++...++.+|++ + |+..||+.|++.+ .||+|+++..+++++|++|+
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh-hcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCcc
Confidence 34689999999999 68999999999999999999983 5 5999999998653 46999999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|+||||+.+|+.+|++ +|+++|+|.|+.....+... ..|++++.++.+|
T Consensus 206 ~~l~VgDs~~di~aA~~----aG~~~i~v~~~~~~~~~~~~--~~~~~~i~~l~el 255 (261)
T 1yns_A 206 NILFLTDVTREASAAEE----ADVHVAVVVRPGNAGLTDDE--KTYYSLITSFSEL 255 (261)
T ss_dssp GEEEEESCHHHHHHHHH----TTCEEEEECCTTCCCCCHHH--HHHSCEESSGGGC
T ss_pred cEEEEcCCHHHHHHHHH----CCCEEEEEeCCCCCcccccc--cCCCEEECCHHHh
Confidence 99999999999999998 89999999997655432222 2478999999887
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=195.67 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=108.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 182 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC 182 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 579999999998 78999999999999999999996 99999999999764 35999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCC-CeeecChhHHhhhcC
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMP-RIQLLQLSDFCTKLK 268 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P-~~~~~~~~~~~~~~~ 268 (268)
||||+.+|+.+|++ +|+++++|.||+. .++ ....| ++++.++.+|...|+
T Consensus 183 ~iGD~~~Di~~a~~----aG~~~~~v~~~~~-~~~---~~~~~~~~~~~~~~el~~~l~ 233 (240)
T 2no4_A 183 FVSSNAWDLGGAGK----FGFNTVRINRQGN-PPE---YEFAPLKHQVNSLSELWPLLA 233 (240)
T ss_dssp EEESCHHHHHHHHH----HTCEEEEECTTCC-CCC---CTTSCCSEEESSGGGHHHHHC
T ss_pred EEeCCHHHHHHHHH----CCCEEEEECCCCC-CCc---ccCCCCceeeCCHHHHHHHHH
Confidence 99999999999998 8999999999976 222 23568 999999999977653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-26 Score=194.19 Aligned_cols=124 Identities=13% Similarity=0.181 Sum_probs=111.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
...++||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+++..+++++|++|++|
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 3579999999998 78999999999999999999996 99999999999865 3599999999999999999999
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
+||||+.+|+.+|++ +|+.+++|.||....++ ....|++++.++.+|...|+
T Consensus 173 ~~iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 173 LFVSCNSWDATGAKY----FGYPVCWINRSNGVFDQ---LGVVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp EEEESCHHHHHHHHH----HTCCEEEECTTSCCCCC---SSCCCSEEESSHHHHHHTCC
T ss_pred EEEeCCHHHHHHHHH----CCCEEEEEeCCCCcccc---ccCCCcEEeCCHHHHHHHHH
Confidence 999999999999999 89999999999665432 34579999999999988764
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.2e-27 Score=196.19 Aligned_cols=121 Identities=18% Similarity=0.150 Sum_probs=108.3
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC--ceEecCCC---CCcHHHHHHHHhcCCCCCC
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGT---GPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f--~~i~g~~~---~pkp~~l~~~~~~l~~~~~ 207 (268)
....++||+.++|+ ++|++++|+||.+...++..++. +|+..+| +.+++.+. ||+|+++..+++++|++|+
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 34579999999999 78999999999999999999996 9999999 88998763 4999999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+||||+.+|+++|++ +|+++|+|.+|.... ...|++++.++.+|...|
T Consensus 146 ~~i~iGD~~~Di~~a~~----aG~~~i~v~~~~~~~------~~~ad~v~~~~~el~~~~ 195 (205)
T 3m9l_A 146 RMVMVGDYRFDLDCGRA----AGTRTVLVNLPDNPW------PELTDWHARDCAQLRDLL 195 (205)
T ss_dssp GEEEEESSHHHHHHHHH----HTCEEEECSSSSCSC------GGGCSEECSSHHHHHHHH
T ss_pred HEEEECCCHHHHHHHHH----cCCEEEEEeCCCCcc------cccCCEEeCCHHHHHHHH
Confidence 99999999999999999 899999999998532 224889999999998765
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-25 Score=188.75 Aligned_cols=203 Identities=16% Similarity=0.111 Sum_probs=145.6
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+|+-..+..+.+.++++++ ++... .+..+.+.|......+ +.+
T Consensus 4 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~--~~~---------- 58 (229)
T 2fdr_A 4 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAG------YPISV-------EEMGERFAGMTWKNIL--LQV---------- 58 (229)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTT------CCCCH-------HHHHHHHTTCCHHHHH--HHH----------
T ss_pred ccEEEEcCCCCcCccHHHHHHHHHHHHHHhC------CCCCH-------HHHHHHHhCCCHHHHH--HHH----------
Confidence 5899999999999999998888888888883 32110 0122333343332221 111
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCC--CHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEc
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVT 159 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvT 159 (268)
.+.++. ..+.... +.+.|.+. +.....+|||+.++|+....+++|+|
T Consensus 59 -----------------------~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~~~i~s 107 (229)
T 2fdr_A 59 -----------------------ESEASIPLSASLLDK----SEKLLDMR----LERDVKIIDGVKFALSRLTTPRCICS 107 (229)
T ss_dssp -----------------------HHHHCCCCCTHHHHH----HHHHHHHH----HHHHCCBCTTHHHHHHHCCSCEEEEE
T ss_pred -----------------------HHHcCCCCCHHHHHH----HHHHHHHH----hhcCCccCcCHHHHHHHhCCCEEEEE
Confidence 111111 1111111 22222211 11235789999999993333999999
Q ss_pred CCchHHHHHHHHHhcCCCCCC-ceEecCC----C--CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 160 SNQSRFVETLLRELAGVTITP-DRLYGLG----T--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f-~~i~g~~----~--~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|.+...++..+++ +|+..+| +.+++.+ . +|||+.+..+++++|++|+++++|||+.+|+.+|++ +|+.
T Consensus 108 ~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~----aG~~ 182 (229)
T 2fdr_A 108 NSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA----AGMR 182 (229)
T ss_dssp SSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTCE
T ss_pred CCChhHHHHHHHh-CChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHH----CCCE
Confidence 9999999999996 9999999 8888753 5 799999999999999999999999999999999998 8999
Q ss_pred EEEEecCCCC----HHHHHhcCCCCCeeecChhHHhhhc
Q 024375 233 LYLVDWGYNT----PKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 233 ~i~v~wGy~~----~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|++.+|... .+++++. .|++++.++.+|...|
T Consensus 183 ~i~~~~~~~~~~~~~~~l~~~--~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 183 VIGFTGASHTYPSHADRLTDA--GAETVISRMQDLPAVI 219 (229)
T ss_dssp EEEECCSTTCCTTHHHHHHHH--TCSEEESCGGGHHHHH
T ss_pred EEEEecCCccchhhhHHHhhc--CCceeecCHHHHHHHH
Confidence 9999999864 3345554 3779999999997655
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=200.41 Aligned_cols=116 Identities=13% Similarity=0.170 Sum_probs=94.7
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhc--C---------CCCCCceEecC---CCCCcHHHHHHHHhcC
Q 024375 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA--G---------VTITPDRLYGL---GTGPKVNVLKQLQKKP 202 (268)
Q Consensus 137 ~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~--g---------l~~~f~~i~g~---~~~pkp~~l~~~~~~l 202 (268)
...+|||+.++|+. |++++|+||++...++.+|++ + | +..+|+.++.. ..||+|++++.+++++
T Consensus 123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~l 200 (253)
T 2g80_A 123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDI 200 (253)
T ss_dssp CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHc
Confidence 46899999999999 999999999999999999995 7 5 44444443321 1489999999999999
Q ss_pred CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEec-CCCCHHHHHhcCCCCCeeecChhHH
Q 024375 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW-GYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~w-Gy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
|++|++|+|||||.+|+++|++ ||+++|+|.| |+.. +. ...|+.++.++.+|
T Consensus 201 g~~p~~~l~vgDs~~di~aA~~----aG~~~i~v~~~~~~~---~~--~~~~~~~i~~l~eL 253 (253)
T 2g80_A 201 GAKASEVLFLSDNPLELDAAAG----VGIATGLASRPGNAP---VP--DGQKYQVYKNFETL 253 (253)
T ss_dssp TCCGGGEEEEESCHHHHHHHHT----TTCEEEEECCTTSCC---CC--SSCCSCEESCSTTC
T ss_pred CCCcccEEEEcCCHHHHHHHHH----cCCEEEEEcCCCCCC---cc--cccCCCccCChhhC
Confidence 9999999999999999999998 8999999999 4432 11 11378888888764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=195.56 Aligned_cols=126 Identities=13% Similarity=0.075 Sum_probs=108.1
Q ss_pred cCCCCCccHHHHHH---hCCC--cEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC--------CCCcHHHHHHHHhcC
Q 024375 136 GANRLYPGVSDALK---LASS--RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------TGPKVNVLKQLQKKP 202 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~--~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~--------~~pkp~~l~~~~~~l 202 (268)
....+|||+.++|+ ++|+ +++|+||.....++..++. +|+..+|+.+++++ .||||+++..+++++
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 34689999999999 6899 9999999999999999996 99999999998653 259999999999999
Q ss_pred CCCC-CcEEEEcCcHhhHHHhhccCccCCC-cEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 203 EHQG-LRLHFVEDRLATLKNVIKEPELDGW-NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 203 ~~~~-~~~~~VGDs~~Di~aa~~~~~~agi-~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
|++| ++|+||||+.+|+.+|++ +|+ .++++..+.... .....+.|++++.++.+|...|+
T Consensus 218 gi~~~~~~i~vGD~~~Di~~a~~----aG~~~~~~~~~~~~~~--~~~~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 218 GLARYENAYFIDDSGKNIETGIK----LGMKTCIHLVENEVNE--ILGQTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp TCCCGGGEEEEESCHHHHHHHHH----HTCSEEEEECSCCC------CCCCTTCEEESSGGGGGGTSG
T ss_pred CCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEEcCCcccc--ccccCCCCCEEeCCHHHHHHHhh
Confidence 9999 999999999999999999 899 678888887432 22334578899999999988763
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=193.36 Aligned_cols=214 Identities=12% Similarity=0.106 Sum_probs=140.1
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+||+||||+||.+.+..++..++++++ ++.. . ++++...+... ..+.. .
T Consensus 6 ~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g------~~~~-~-------~~~~~~~~~~~------~~~~~-~------ 58 (240)
T 3smv_A 6 FKALTFDCYGTLIDWETGIVNALQPLAKRTG------KTFT-S-------DELLEVFGRNE------SPQQT-E------ 58 (240)
T ss_dssp CSEEEECCBTTTBCHHHHHHHHTHHHHHHHT------CCCC-H-------HHHHHHHHHHH------GGGCC-S------
T ss_pred ceEEEEeCCCcCcCCchhHHHHHHHHHHHhC------CCCC-H-------HHHHHHHHHHH------HHHHh-h------
Confidence 5899999999999999999999999999884 2211 1 11111111000 00000 0
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEc
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVT 159 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvT 159 (268)
..+....... ......+.+.+++... .+ ....|... .....+|||+.++|+ ++|++++|+|
T Consensus 59 ---~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~----~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~~~~~i~t 121 (240)
T 3smv_A 59 ---TPGALYQDIL---RAVYDRIAKEWGLEPD--AA----EREEFGTS-----VKNWPAFPDTVEALQYLKKHYKLVILS 121 (240)
T ss_dssp ---SCCSCHHHHH---HHHHHHHHHHTTCCCC--HH----HHHHHHTG-----GGGCCBCTTHHHHHHHHHHHSEEEEEE
T ss_pred ---CCCCChhHHH---HHHHHHHHHHhCCCCC--HH----HHHHHHHH-----HhcCCCCCcHHHHHHHHHhCCeEEEEe
Confidence 0011111111 1112233344444311 01 12222222 134589999999999 4589999999
Q ss_pred CCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHH---HhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCC
Q 024375 160 SNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQL---QKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGW 231 (268)
Q Consensus 160 nK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~---~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi 231 (268)
|.+...+...++. +..+|+.+++++ .||+|+++..+ ++++|++|++|+||||+. +|+++|++ +|+
T Consensus 122 n~~~~~~~~~l~~---l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~----aG~ 194 (240)
T 3smv_A 122 NIDRNEFKLSNAK---LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPAND----AGL 194 (240)
T ss_dssp SSCHHHHHHHHTT---TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHH----HTC
T ss_pred CCChhHHHHHHHh---cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHH----cCC
Confidence 9999999999884 557899999864 46999998888 889999999999999996 99999999 899
Q ss_pred cEEEEe-----cCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 232 NLYLVD-----WGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 232 ~~i~v~-----wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.++++. |||+...+ ......|++++.++.+|...|
T Consensus 195 ~~~~~~~~~~~~g~g~~~~-~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 195 VSAWIYRRHGKEGYGATHV-PSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp EEEEECTTCC-------CC-CSSCCCCSEEESSHHHHHHHH
T ss_pred eEEEEcCCCcccCCCCCCC-CcCCCCCCEEeCCHHHHHHHH
Confidence 999998 77776532 122467999999999997665
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=189.74 Aligned_cols=118 Identities=12% Similarity=0.145 Sum_probs=104.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.+ |+ ++ ++++|+||++...++.+|++ +|+..+|+.+++++ .||+|+++..+++++| |++|+
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 578999999 88 57 99999999999999999996 99999999999764 3599999999999999 99999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||||+.+|+++|++ +|+++++|.||+...+.+ ...|++++.++.+|...|
T Consensus 148 ~vGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 148 LVSSNAFDVIGAKN----AGMRSIFVNRKNTIVDPI---GGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp EEESCHHHHHHHHH----TTCEEEEECSSSCCCCTT---SCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHhHHHHH----CCCEEEEECCCCCCcccc---CCCCCEEECCHHHHHHHH
Confidence 99999999999998 899999999987654322 346899999999997655
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=189.93 Aligned_cols=118 Identities=12% Similarity=-0.012 Sum_probs=99.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCC-CcE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG-LRL 209 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~-~~~ 209 (268)
..+|||+.++|+ ++|++++|+||+++..+.++ .+ .+|+.|+|++ .||+|+++..+++++++.+ ++|
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~----~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 108 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL----AA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGC 108 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH----HT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh----cC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccE
Confidence 478999999999 68999999999999887433 34 4789888865 3599999999999999975 899
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEEecCCCC-----------------------HHHHHhcCCCCCeeecChhHHhhh
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~-----------------------~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
+|||||.+||++|++ ||+++|+|.||++. .+++.. ..|++++.++.+|...
T Consensus 109 v~VGDs~~Di~aA~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~--~~~d~vi~~~~eL~~~ 182 (196)
T 2oda_A 109 VLISGDPRLLQSGLN----AGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYS--LGVHSVIDHLGELESC 182 (196)
T ss_dssp EEEESCHHHHHHHHH----HTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH--TTCSEEESSGGGHHHH
T ss_pred EEEeCCHHHHHHHHH----CCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHH--cCCCEEeCCHHHHHHH
Confidence 999999999999998 89999999999863 122332 4689999999999765
Q ss_pred c
Q 024375 267 L 267 (268)
Q Consensus 267 ~ 267 (268)
|
T Consensus 183 l 183 (196)
T 2oda_A 183 L 183 (196)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=194.64 Aligned_cols=124 Identities=16% Similarity=0.205 Sum_probs=107.3
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
..+|||+.++|+ + |++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+|
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 169 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 579999999999 6 999999999999999999996 99999999999865 359999999999999999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEec------------CCCCHHH--------HHhcCCCCCeeecChhHHhhhc
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDW------------GYNTPKE--------RAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~w------------Gy~~~~e--------l~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|||+.+|+.+|++ +|++++++.| ||.++.. .......|++++.++.+|...|
T Consensus 170 vGD~~~Di~~a~~----aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 170 VSSNGFDVGGAKN----FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp EESCHHHHHHHHH----HTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EeCChhhHHHHHH----CCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 9999999999998 8999999999 5522221 1122457999999999997655
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-26 Score=190.54 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=97.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+|||+.++|+ ++| +++|+||++...+..++++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRT-FGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHH-HTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHh-CCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 469999999999 678 9999999999999999996 99999999998754 46999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcC
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 250 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~ 250 (268)
||||+.+|+.+|++ +|+++++|.||+...+++..++
T Consensus 163 ~vgD~~~Di~~a~~----aG~~~~~~~~~~~~~~~l~~~g 198 (200)
T 3cnh_A 163 MVDDRLQNVQAARA----VGMHAVQCVDAAQLREELAALG 198 (200)
T ss_dssp EEESCHHHHHHHHH----TTCEEEECSCHHHHHHHHHHTT
T ss_pred EeCCCHHHHHHHHH----CCCEEEEECCchhhHHHHHHhc
Confidence 99999999999998 8999999999998887777654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-25 Score=193.40 Aligned_cols=119 Identities=10% Similarity=0.049 Sum_probs=103.1
Q ss_pred CCCCCccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCC----
Q 024375 137 ANRLYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEH---- 204 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~-g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~---- 204 (268)
...++||+.++|+ ++ |++++|+||++...++..|+. +|+. +|+.+++++ .+|+|+++..+++++|+
T Consensus 112 ~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~-~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 189 (275)
T 2qlt_A 112 HSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINE 189 (275)
T ss_dssp TCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHH-HTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCS
T ss_pred CCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHH-cCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCccc
Confidence 4578999999999 56 899999999999999999996 9987 478888654 34999999999999999
Q ss_pred ---CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 205 ---QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 205 ---~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
+|++|++|||+.+|+++|++ ||+.+++|.||++ .+++.. ..|++++.++++|.
T Consensus 190 ~~~~~~~~i~~GDs~nDi~~a~~----AG~~~i~v~~~~~-~~~~~~--~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 190 QDPSKSKVVVFEDAPAGIAAGKA----AGCKIVGIATTFD-LDFLKE--KGCDIIVKNHESIR 245 (275)
T ss_dssp SCGGGSCEEEEESSHHHHHHHHH----TTCEEEEESSSSC-HHHHTT--SSCSEEESSGGGEE
T ss_pred cCCCcceEEEEeCCHHHHHHHHH----cCCEEEEECCCCC-HHHHhh--CCCCEEECChHHcC
Confidence 99999999999999999998 8999999999975 444443 35789999998873
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-25 Score=185.28 Aligned_cols=187 Identities=14% Similarity=0.178 Sum_probs=133.1
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|.++|+|||||||+||-+.+. +.++++++ ++.. .+.++.+.|.+....+. .
T Consensus 4 m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g------~~~~--------~~~~~~~~~~~~~~~~~-----~------- 54 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNREES---IRRFKAIG------VADI--------EEMLDPYLQKGLFLDLE-----S------- 54 (211)
T ss_dssp CCSEEEECSBTTTEEECHHHH---HHHHHHTT------CTTH--------HHHTCC---CCHHHHHH-----H-------
T ss_pred cceEEEEeCCCeeEecchHHH---HHHHHHhC------CchH--------HHHHHHHhCchHHHHHH-----c-------
Confidence 679999999999999998765 56677773 3211 13456666766533221 1
Q ss_pred ccccccC-CcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcE
Q 024375 81 KSSVAEG-LTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRI 155 (268)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l 155 (268)
+ .+..+... .+.+.++ .+.+ .+.+.|... ...+|||+.++|+ ++|+++
T Consensus 55 ------g~~~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~~-------~~~~~~~~~~~l~~l~~g~~~ 107 (211)
T 2i6x_A 55 ------GRKSEEEFRT-------ELSRYIGKELTYQ-------QVYDALLGF-------LEEISAEKFDYIDSLRPDYRL 107 (211)
T ss_dssp ------SSSCHHHHHH-------HHHHHHTSCCCHH-------HHHHHHGGG-------EEEECHHHHHHHHHHTTTSEE
T ss_pred ------CCCCHHHHHH-------HHHHHhCCCCCHH-------HHHHHHHHh-------hcccChHHHHHHHHHHcCCeE
Confidence 1 12222211 1222222 2211 122222211 2368999999999 449999
Q ss_pred EEEcCCchHHHHHHHHHh------cCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhcc
Q 024375 156 YIVTSNQSRFVETLLREL------AGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~------~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~ 225 (268)
+|+||++...++.+++ . +|+..+|+.+++++ .||+|+++..+++++|++|++|+||||+.+|+.+|++
T Consensus 108 ~i~t~~~~~~~~~~~~-~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~- 185 (211)
T 2i6x_A 108 FLLSNTNPYVLDLAMS-PRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAER- 185 (211)
T ss_dssp EEEECCCHHHHHHHTS-TTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHH-
T ss_pred EEEeCCCHHHHHHHHh-hhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHH-
Confidence 9999999999999998 5 69999999998754 4699999999999999999999999999999999998
Q ss_pred CccCCCcEEEEecCCCCHHHHHh
Q 024375 226 PELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 226 ~~~agi~~i~v~wGy~~~~el~~ 248 (268)
+|++++++.||....+.+.+
T Consensus 186 ---aG~~~~~~~~~~~~~~~l~~ 205 (211)
T 2i6x_A 186 ---LGFHTYCPDNGENWIPAITR 205 (211)
T ss_dssp ---TTCEEECCCTTCCCHHHHHH
T ss_pred ---cCCEEEEECCHHHHHHHHHH
Confidence 89999999999887776654
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-26 Score=194.25 Aligned_cols=114 Identities=17% Similarity=0.081 Sum_probs=91.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
...+|||+.++|+ ++|++++|+||++. .+...|++ +|+..+|+.+++++ .||+|+++..+++++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 3579999999999 67999999999987 48899996 99999999999865 2488899999999999988
Q ss_pred EEEcCcHh-hHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 210 HFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 210 ~~VGDs~~-Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+||||+.+ |+.+|++ +|+++|+|.++. ...+ .++++.++.+|...|
T Consensus 168 ~~vgD~~~~Di~~a~~----aG~~~i~v~~~~-~~~~-------~~~~i~~l~el~~~l 214 (220)
T 2zg6_A 168 VHVGDIYELDYIGAKR----SYVDPILLDRYD-FYPD-------VRDRVKNLREALQKI 214 (220)
T ss_dssp EEEESSCCCCCCCSSS----CSEEEEEBCTTS-CCTT-------CCSCBSSHHHHHHHH
T ss_pred EEEcCCchHhHHHHHH----CCCeEEEECCCC-CCCC-------cceEECCHHHHHHHH
Confidence 99999999 9999998 899999998762 2111 156788999886654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-25 Score=184.54 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=105.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEe-----cCC----CCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLY-----GLG----TGP 190 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~-----g~~----~~p 190 (268)
.++|||+.++|+ ++|++++|+||++. +.+...|++ +| .+|+.++ +++ .||
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g--~~~~~~~~~~~~~~~~~~~~KP 102 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MG--GVVDAIFMCPHGPDDGCACRKP 102 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TT--CCCCEEEEECCCTTSCCSSSTT
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CC--CceeEEEEcCCCCCCCCCCCCC
Confidence 478999999999 78999999999997 778899995 88 3455544 222 359
Q ss_pred cHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 191 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 191 kp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+++..+++++|++|++|+||||+.+|+++|++ +|+++|+|.||++..+.+....+.|++++.++.+|...|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 103 LPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQ----AGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp SSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHH----HTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----CCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 9999999999999999999999999999999999 899999999999876665543467999999999997765
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.8e-25 Score=180.89 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=87.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.++||+.++|+ ++|++++|+||++. .+...+++ +|+..+|+.+++++ .+|+|+.+..+++++|++ +|++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHH-cCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 48999999999 68999999999875 68889996 99999999998764 349999999999999998 9999
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
|||+.+|+++|++ +|+.++++.||+...+
T Consensus 158 iGD~~~Di~~a~~----aG~~~~~~~~~~~~~~ 186 (190)
T 2fi1_A 158 IGDRPIDIEAGQA----AGLDTHLFTSIVNLRQ 186 (190)
T ss_dssp EESSHHHHHHHHH----TTCEEEECSCHHHHHH
T ss_pred EcCCHHHHHHHHH----cCCeEEEECCCCChhh
Confidence 9999999999998 8999999999865443
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=180.22 Aligned_cols=125 Identities=11% Similarity=0.122 Sum_probs=108.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhcCCCCCCceEecCCC--------CCcHHHHHHHHhcCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKPE 203 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~---~~~~~~L~~~~gl~~~f~~i~g~~~--------~pkp~~l~~~~~~l~ 203 (268)
..+|||+.++|+ ++|++++|+||++. ..+..+|++ +|+..+|+.|++++. ||+|+++..+++++|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 111 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQ 111 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcC
Confidence 579999999999 78999999999988 899999996 999999999998642 599999999999999
Q ss_pred CCCCcEEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhhc
Q 024375 204 HQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 267 (268)
Q Consensus 204 ~~~~~~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~~ 267 (268)
++|++|+||||+ .+|+.+|++ +|+++|+|.+|.............|++++. ++++|...|
T Consensus 112 ~~~~~~l~VGD~~~~Di~~A~~----aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 112 IDKTEAVMVGNTFESDIIGANR----AGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp CCGGGEEEEESBTTTTHHHHHH----TTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred CCcccEEEECCCcHHHHHHHHH----CCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 999999999999 799999999 899999999998643211112248999999 999998765
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=183.08 Aligned_cols=119 Identities=13% Similarity=0.260 Sum_probs=94.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCC--CCceEe---------cCCC-------CCcHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLY---------GLGT-------GPKVNVLK 196 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~--~f~~i~---------g~~~-------~pkp~~l~ 196 (268)
.++|||+.++|+ ++|++++|+||++...++.+|++ +|+.. +|+.++ |.+. ++||+++.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 163 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 163 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence 579999999999 78999999999999999999996 99974 776553 4331 37999999
Q ss_pred HHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 197 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 197 ~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
.+++++|+ ++|+||||+.+|+.+|++ ||+ +|+ ||++...+.... .|++++.++.++...|+
T Consensus 164 ~~~~~~~~--~~~~~vGDs~~Di~~a~~----ag~-~i~--~~~~~~~~~~~~--~~~~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 164 LLKEKFHF--KKIIMIGDGATDMEACPP----ADA-FIG--FGGNVIRQQVKD--NAKWYITDFVELLGELE 224 (225)
T ss_dssp HHHHHHCC--SCEEEEESSHHHHTTTTT----SSE-EEE--ECSSCCCHHHHH--HCSEEESCGGGGCC---
T ss_pred HHHHHcCC--CcEEEEeCcHHhHHHHHh----CCe-EEE--ecCccccHHHHh--cCCeeecCHHHHHHHHh
Confidence 99999988 789999999999999998 788 555 455433223222 48899999999977653
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-23 Score=176.89 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=90.0
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHH------HHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCC
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLL------RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L------~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~ 206 (268)
.++||+.++|+ ++.++++|+||.+...+..++ +. +|+..+|+.+++++ .||+|+++..+++++|++|
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 57899999999 333999999999999998666 64 88888999998764 4699999999999999999
Q ss_pred CcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHH
Q 024375 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 246 (268)
Q Consensus 207 ~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el 246 (268)
++|+||||+.+|+++|++ +|+.+|+|.+|....+.+
T Consensus 191 ~~~~~vGD~~~Di~~a~~----aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQE----LGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp GGEEEECSCHHHHHHHHH----TTCEEECCCTTCCGGGGG
T ss_pred HHeEEECCCHHHHHHHHH----cCCEEEEECCHHHHHHHh
Confidence 999999999999999998 899999999987654433
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-24 Score=179.09 Aligned_cols=106 Identities=14% Similarity=0.168 Sum_probs=91.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..++||+.++|+ ++|++++|+||++...+..++++.+|+..+|+.+++++ .||+|+++..+++++|++|++|+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 468999999999 68999999999998887777762167788899998754 46999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHH
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 247 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~ 247 (268)
||||+.+|+.+|++ +|++++++.||....+.++
T Consensus 170 ~vgD~~~Di~~a~~----aG~~~~~~~~~~~~~~~l~ 202 (206)
T 2b0c_A 170 FFDDNADNIEGANQ----LGITSILVKDKTTIPDYFA 202 (206)
T ss_dssp EEESCHHHHHHHHT----TTCEEEECCSTTHHHHHHH
T ss_pred EeCCCHHHHHHHHH----cCCeEEEecCCchHHHHHH
Confidence 99999999999998 8999999999875544443
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-23 Score=172.55 Aligned_cols=118 Identities=11% Similarity=0.114 Sum_probs=96.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC-ceEec-CCC------CCcHHHHHHHHhcCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYG-LGT------GPKVNVLKQLQKKPEHQ 205 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f-~~i~g-~~~------~pkp~~l~~~~~~l~~~ 205 (268)
...+|||+.++|+ ++ ++++|+||++...++.++++ +|+..+| +.++. .+. +|+|++...++++++..
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~ 144 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhc
Confidence 3579999999999 56 99999999999999999996 9999999 45554 332 29999999999999999
Q ss_pred CCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCee-ecChhHHhhhc
Q 024375 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQ-LLQLSDFCTKL 267 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~-~~~~~~~~~~~ 267 (268)
|++|+||||+.+|+.+|++ +|++++ ++ ...++... .|+++ +.++.++...|
T Consensus 145 ~~~~~~iGD~~~Di~~a~~----aG~~~~---~~--~~~~~~~~--~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 145 YYRVIAAGDSYNDTTMLSE----AHAGIL---FH--APENVIRE--FPQFPAVHTYEDLKREF 196 (206)
T ss_dssp TCEEEEEECSSTTHHHHHH----SSEEEE---ES--CCHHHHHH--CTTSCEECSHHHHHHHH
T ss_pred CCEEEEEeCChhhHHHHHh----cCccEE---EC--CcHHHHHH--HhhhccccchHHHHHHH
Confidence 9999999999999999998 788754 32 33455544 46675 89999987654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=171.34 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=102.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHhcCCCCCCceEe-cC------------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLY-GL------------ 186 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---------------~~~~~~~L~~~~gl~~~f~~i~-g~------------ 186 (268)
..+|||+.++|+ ++|++++|+||++ ...++.+|++ +|+. |+.++ +.
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--f~~~~~~~~~~~~~~~~~~~ 125 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD--LDGIYYCPHHPQGSVEEFRQ 125 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCBTTCSSGGGBS
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCc--eEEEEECCcCCCCcccccCc
Confidence 468999999999 7899999999999 5889999996 9997 66654 21
Q ss_pred C---CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE-EEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 187 G---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 187 ~---~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~-i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+ .||+|+++..++++++++|++|+||||+.+|+.+|++ +|+++ |+|.||+...+... ..|++++.++.+
T Consensus 126 ~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~----aG~~~~i~v~~g~~~~~~~~---~~~d~vi~~l~e 198 (211)
T 2gmw_A 126 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA----ANVGTKVLVRTGKPITPEAE---NAADWVLNSLAD 198 (211)
T ss_dssp CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH----TTCSEEEEESSSSCCCHHHH---HHCSEEESCGGG
T ss_pred cCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----CCCceEEEEecCCCcccccc---CCCCEEeCCHHH
Confidence 1 3599999999999999999999999999999999998 89999 99999997654332 258899999999
Q ss_pred Hhhhc
Q 024375 263 FCTKL 267 (268)
Q Consensus 263 ~~~~~ 267 (268)
|...|
T Consensus 199 l~~~l 203 (211)
T 2gmw_A 199 LPQAI 203 (211)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 97654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.7e-23 Score=171.24 Aligned_cols=102 Identities=21% Similarity=0.153 Sum_probs=92.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~-~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
...++||+.++|+ ++|++++|+||++ ...++.+++. +|+..+|+.+++.. +|||+.+..++++++++|++|+||
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~~i 143 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHREIYP-GSKITHFERLQQKTGIPFSQMIFF 143 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEEESS-SCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeEEEe-CchHHHHHHHHHHcCCChHHEEEE
Confidence 4579999999999 7899999999999 7999999996 99999999875533 589999999999999999999999
Q ss_pred cCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 213 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
||+.+|+++|++ +|+++|+|.||++..+
T Consensus 144 gD~~~Di~~a~~----aG~~~i~v~~g~~~~~ 171 (187)
T 2wm8_A 144 DDERRNIVDVSK----LGVTCIHIQNGMNLQT 171 (187)
T ss_dssp ESCHHHHHHHHT----TTCEEEECSSSCCHHH
T ss_pred eCCccChHHHHH----cCCEEEEECCCCChHH
Confidence 999999999998 8999999999997543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-24 Score=184.96 Aligned_cols=123 Identities=13% Similarity=0.119 Sum_probs=99.8
Q ss_pred CCCCCccHHHHHH---hCCCcEE---------------------------------EEcCCchHHHHHHHHHhcC-CCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIY---------------------------------IVTSNQSRFVETLLRELAG-VTIT 179 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~---------------------------------IvTnK~~~~~~~~L~~~~g-l~~~ 179 (268)
...++||+.++|+ ++|++++ |+||.+ .....+++. +| +..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~-~~~~~~~ 162 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPA-CGALCAG 162 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBC-HHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeec-chHHHHH
Confidence 3568899999998 7899999 999987 444444442 44 4455
Q ss_pred CceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCC
Q 024375 180 PDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 254 (268)
Q Consensus 180 f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~ 254 (268)
|+.+.+.+ .+|||.++..+++++|++|++|++|||+ .+|+++|++ ||+.+++|.||++..++++.....|+
T Consensus 163 ~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~----aG~~~~~v~~g~~~~~~~~~~~~~~~ 238 (250)
T 2c4n_A 163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSSLDDIDSMPFRPS 238 (250)
T ss_dssp HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH----TTCEEEEESSSSCCGGGGSSCSSCCS
T ss_pred HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHH----cCCeEEEECCCCCChhhhhhcCCCCC
Confidence 66666655 3599999999999999999999999999 699999998 89999999999988776654446799
Q ss_pred eeecChhHHhh
Q 024375 255 IQLLQLSDFCT 265 (268)
Q Consensus 255 ~~~~~~~~~~~ 265 (268)
+++.++.+|..
T Consensus 239 ~v~~~~~el~~ 249 (250)
T 2c4n_A 239 WIYPSVAEIDV 249 (250)
T ss_dssp EEESSGGGCCC
T ss_pred EEECCHHHhhc
Confidence 99999998753
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-24 Score=182.55 Aligned_cols=177 Identities=16% Similarity=0.159 Sum_probs=125.6
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.++|+|||||||+||.+.+..+++.+++ + ++.. +.++++.+++. ..+ +.+..
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g------~~~~-------~~~~~~~~~~~---~~~--~~~~~-------- 53 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--E------EPHV-------PLEQRRGFLAR---EQY--RALRP-------- 53 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--T------SCCC-------CGGGCCSSCHH---HHH--HHHCT--------
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--C------CCCC-------CHHHHHHhhHH---HHH--HHHhH--------
Confidence 4789999999999999999999988765 2 1111 12345555421 111 11100
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hC-CCcEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA-SSRIYI 157 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~-g~~l~I 157 (268)
+..+.+++.|.+. .+.....+|||+.++|+ ++ |++++|
T Consensus 54 -----------------------------------~~~~~~~~~~~~~---~~~~~~~~~~g~~e~L~~L~~~~g~~~~i 95 (193)
T 2i7d_A 54 -----------------------------------DLADKVASVYEAP---GFFLDLEPIPGALDAVREMNDLPDTQVFI 95 (193)
T ss_dssp -----------------------------------THHHHHHHHHTST---TTTTTCCBCTTHHHHHHHHHTSTTEEEEE
T ss_pred -----------------------------------HHHHHHHHHHHhc---CccccCccCcCHHHHHHHHHhCCCCeEEE
Confidence 0112344444332 12334689999999999 56 999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhh----HHHhh-ccCccCCCc
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLAT----LKNVI-KEPELDGWN 232 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~D----i~aa~-~~~~~agi~ 232 (268)
+||++...++..|++ +|+ |+.++|+ .++++++++|++|+||||+.+| +.+|+ + +|++
T Consensus 96 vT~~~~~~~~~~l~~-~gl---f~~i~~~----------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~----aG~~ 157 (193)
T 2i7d_A 96 CTSPLLKYHHCVGEK-YRW---VEQHLGP----------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEET----PSWE 157 (193)
T ss_dssp EECCCSSCTTTHHHH-HHH---HHHHHCH----------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSS----CSSE
T ss_pred EeCCChhhHHHHHHH-hCc---hhhhcCH----------HHHHHcCCCcccEEEECCchhhCcHHHhhcccc----cccc
Confidence 999999999999996 998 7888764 2788899999999999999999 99998 7 8999
Q ss_pred EEEEecCCCCHHHHHhcCCCCCe-eecCh-hHHhhhc
Q 024375 233 LYLVDWGYNTPKERAEAASMPRI-QLLQL-SDFCTKL 267 (268)
Q Consensus 233 ~i~v~wGy~~~~el~~~~~~P~~-~~~~~-~~~~~~~ 267 (268)
+|++.++++... ...|++ .+.++ +++...|
T Consensus 158 ~i~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 158 HILFTCCHNRHL-----VLPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp EEEECCGGGTTC-----CCCTTSCEECSTTSCHHHHH
T ss_pred eEEEEeccCccc-----ccccchHHHhhHHHHHHHHh
Confidence 999999876542 123556 58888 5554443
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-24 Score=180.86 Aligned_cols=107 Identities=16% Similarity=0.117 Sum_probs=89.6
Q ss_pred CCCCCccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHhcCCCC-CCceEecCCCCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 137 ANRLYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~-g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
...+|||+.++|+ ++ |++++|+||+++..++..|++ +|+.. ||+ ..++++++++|++|+|
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~f~--------------~~~~~~l~~~~~~~~~ 137 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWVEKYFG--------------PDFLEQIVLTRDKTVV 137 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHHHHHHC--------------GGGGGGEEECSCSTTS
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchHHHhch--------------HHHHHHhccCCccEEE
Confidence 4689999999999 67 999999999999999999996 99887 876 5578889999999999
Q ss_pred EcCcHhh----HHHhh-ccCccCCCcEEEEecCCCCHHHHHhcCCCCCe-eecCh-hHHhhhc
Q 024375 212 VEDRLAT----LKNVI-KEPELDGWNLYLVDWGYNTPKERAEAASMPRI-QLLQL-SDFCTKL 267 (268)
Q Consensus 212 VGDs~~D----i~aa~-~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~-~~~~~-~~~~~~~ 267 (268)
|||+..| +++|+ + ||+++|++.|+++... ...|.+ .+.++ +++..+|
T Consensus 138 vgDs~~dD~~~~~~a~~~----aG~~~i~~~~~~~~~~-----~~~~~~~~v~~~~~~l~~~l 191 (197)
T 1q92_A 138 SADLLIDDRPDITGAEPT----PSWEHVLFTACHNQHL-----QLQPPRRRLHSWADDWKAIL 191 (197)
T ss_dssp CCSEEEESCSCCCCSCSS----CSSEEEEECCTTTTTC-----CCCTTCEEECCTTSCHHHHH
T ss_pred ECcccccCCchhhhcccC----CCceEEEecCcccccc-----cccccchhhhhHHHHHHHHh
Confidence 9999999 99998 7 8999999999987532 224555 68888 4665544
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.9e-23 Score=192.08 Aligned_cols=106 Identities=18% Similarity=0.102 Sum_probs=90.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC------chHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSN------QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK------~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~ 204 (268)
..+|||+.++|+ ++|++++|+||. ........+. |+..+|+.|++++ .||+|++++.+++++|+
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~ 175 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC---ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 175 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH---HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh---hhhhheeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence 589999999998 789999999998 3333333322 6778999999864 46999999999999999
Q ss_pred CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcC
Q 024375 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 250 (268)
Q Consensus 205 ~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~ 250 (268)
+|++|+||||+.+|+++|++ +|+++|++.+|+...+++..+.
T Consensus 176 ~p~~~~~v~D~~~di~~a~~----aG~~~~~~~~~~~~~~~l~~~~ 217 (555)
T 3i28_A 176 SPSEVVFLDDIGANLKPARD----LGMVTILVQDTDTALKELEKVT 217 (555)
T ss_dssp CGGGEEEEESCHHHHHHHHH----HTCEEEECSSHHHHHHHHHHHH
T ss_pred ChhHEEEECCcHHHHHHHHH----cCCEEEEECCCccHHHHHHhhh
Confidence 99999999999999999999 8999999999987777776653
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-22 Score=180.67 Aligned_cols=112 Identities=17% Similarity=0.195 Sum_probs=91.6
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
....+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++. +| ..++++++.. ++|+||
T Consensus 160 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~---~K----~~~~~~l~~~-~~~~~v 230 (287)
T 3a1c_A 160 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAEVLPH---QK----SEEVKKLQAK-EVVAFV 230 (287)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCTT---CH----HHHHHHHTTT-CCEEEE
T ss_pred eccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeeecChH---HH----HHHHHHHhcC-CeEEEE
Confidence 45689999999999 78999999999999999999996 9999888877632 44 4566777777 999999
Q ss_pred cCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeee--cChhHHhhhc
Q 024375 213 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 267 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~--~~~~~~~~~~ 267 (268)
||+.+|+.+|++ ||+. |.||++... ....|++++ .++.++...|
T Consensus 231 GDs~~Di~~a~~----ag~~---v~~~~~~~~----~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 231 GDGINDAPALAQ----ADLG---IAVGSGSDV----AVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp ECTTTCHHHHHH----SSEE---EEECCCSCC----SSCCSSEEESSSCTHHHHHHH
T ss_pred ECCHHHHHHHHH----CCee---EEeCCCCHH----HHhhCCEEEeCCCHHHHHHHH
Confidence 999999999998 7764 667765421 234689999 8999987654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-22 Score=165.51 Aligned_cols=114 Identities=10% Similarity=0.014 Sum_probs=94.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC-----------C---CCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----------G---TGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~-----------~---~~pkp~~l~~~~~ 200 (268)
..++||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++. + .+|||+++..+++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~ 152 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR 152 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence 579999999999 78999999999999999999996 9999999988531 1 2499999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
++|++|++|+||||+.+|+.+|++ +|++++ | +..++++. .|++++.+. +|..
T Consensus 153 ~~g~~~~~~i~vGDs~~Di~~a~~----aG~~~~---~--~~~~~l~~---~ad~v~~~~-dl~~ 204 (217)
T 3m1y_A 153 LLNISKTNTLVVGDGANDLSMFKH----AHIKIA---F--NAKEVLKQ---HATHCINEP-DLAL 204 (217)
T ss_dssp HHTCCSTTEEEEECSGGGHHHHTT----CSEEEE---E--SCCHHHHT---TCSEEECSS-BGGG
T ss_pred HcCCCHhHEEEEeCCHHHHHHHHH----CCCeEE---E--CccHHHHH---hcceeeccc-CHHH
Confidence 999999999999999999999998 777653 3 34455553 478888754 4433
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-23 Score=183.51 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=100.9
Q ss_pred cCCCCCccHHHHHH--hCCCcEEEEcCCchHH--HHH-HHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCC
Q 024375 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRF--VET-LLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~l~IvTnK~~~~--~~~-~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~ 206 (268)
....+|||+.++|+ ++|+++ |+||++... ... +++. .++..+|+.+++.+ .||+|+++..+++++|++|
T Consensus 123 ~~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGA-GSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp CTTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECH-HHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCG
T ss_pred CCCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCC-cHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCH
Confidence 34579999999999 789997 999998743 222 2332 44556788888765 3699999999999999999
Q ss_pred CcEEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 207 LRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 207 ~~~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
++|+||||+ .+|+.+|++ +|+++|+|.||++..+++......|++++.++.++.
T Consensus 201 ~~~~~vGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQ----NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp GGEEEEESCTTTHHHHHHH----HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHEEEECCCcHHHHHHHHH----cCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 999999999 599999998 899999999999887666655558999999999874
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=158.32 Aligned_cols=103 Identities=15% Similarity=0.063 Sum_probs=79.8
Q ss_pred cCCCCCccHHHHHH--hCCCcEEEEcCC---ch--HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCc
Q 024375 136 GANRLYPGVSDALK--LASSRIYIVTSN---QS--RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 136 ~~~~lypGv~e~L~--~~g~~l~IvTnK---~~--~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~ 208 (268)
...++|||+.++|+ +++++++|+||+ ++ ......|+++++...+|+.|++++.. .+ ++
T Consensus 66 ~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-----------~l----~~ 130 (180)
T 3bwv_A 66 RNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-----------II----LA 130 (180)
T ss_dssp GSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-----------GB----CC
T ss_pred ccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-----------ee----cc
Confidence 35789999999999 557999999999 53 23355566447887888999987631 12 66
Q ss_pred EEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 209 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|||||.+++. ++ || ++|++.|+|+.. +.|++.+.++.+|...|
T Consensus 131 ~l~ieDs~~~i~--~a----aG-~~i~~~~~~~~~-------~~~~~~i~~~~el~~~l 175 (180)
T 3bwv_A 131 DYLIDDNPKQLE--IF----EG-KSIMFTASHNVY-------EHRFERVSGWRDVKNYF 175 (180)
T ss_dssp SEEEESCHHHHH--HC----SS-EEEEECCGGGTT-------CCSSEEECSHHHHHHHH
T ss_pred cEEecCCcchHH--Hh----CC-CeEEeCCCcccC-------CCCceecCCHHHHHHHH
Confidence 899999999985 33 79 999999998532 46889999999987654
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.4e-23 Score=177.41 Aligned_cols=123 Identities=10% Similarity=0.058 Sum_probs=102.8
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc---eEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~---~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
.+|||+.++|+ ++|+++ |+||++.......+.. +|+..+|+ .+++.+ .||+|+++..+++++|++|++|
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 199 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLA-LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA 199 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEE-ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcc-cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence 47899999998 689999 9999988777666774 88887776 555654 3599999999999999999999
Q ss_pred EEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 210 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 210 ~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+||||+. +|+.+|++ ||+++|+|.||.....+.......|++++.++.++...|
T Consensus 200 ~~iGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 200 VMIGDDCRDDVDGAQN----IGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp EEEESCTTTTHHHHHH----TTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred EEECCCcHHHHHHHHH----CCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 9999998 99999998 899999999996544433333467999999999997654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.3e-21 Score=158.67 Aligned_cols=118 Identities=13% Similarity=0.089 Sum_probs=95.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC-C-------------CCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-G-------------TGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~-~-------------~~pkp~~l~~~~~ 200 (268)
..++||+.++|+ ++|++++|+||++...++..++. +|+..+|+.++.. + ..+||+.+..+++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 468899999998 78999999999999999999995 9998766543311 1 1378999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhhhcC
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCTKLK 268 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~~~~ 268 (268)
++|+++++|+||||+.+|+.+|++ ||+.+ .++ . .++++ ..+++++.+ +++|...|+
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~----ag~~~---~~~-~-~~~~~---~~a~~v~~~~~~~~l~~~l~ 211 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKK----AGLKI---AFC-A-KPILK---EKADICIEKRDLREILKYIK 211 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----CSEEE---EES-C-CHHHH---TTCSEEECSSCGGGGGGGCC
T ss_pred HcCCCHHHEEEEecChhHHHHHHH----CCCEE---EEC-C-CHHHH---hhcceeecchhHHHHHHhhC
Confidence 999999999999999999999998 77642 344 2 34443 357899999 999987765
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-22 Score=171.88 Aligned_cols=117 Identities=11% Similarity=0.165 Sum_probs=93.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC------------CCCcHHHHH------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------TGPKVNVLK------ 196 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~------------~~pkp~~l~------ 196 (268)
.++|||+.++|+ ++|++++|+||++...++.+++ |+..+ +.|++.+ .||+|.++.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence 589999999999 6899999999999999999886 66555 8888754 235566433
Q ss_pred --HHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 197 --QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 197 --~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.++++++++|++|+||||+.+|+.+|++ +|++++ .||+ .+++...+ .|++++.++.+|...|
T Consensus 152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~----aG~~~~--~~~~--~~~~~~~~-~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKL----SDLCFA--RDYL--LNECREQN-LNHLPYQDFYEIRKEI 215 (236)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHHHT----CSEEEE--CHHH--HHHHHHTT-CCEECCSSHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEEeCChHHHHHHHh----CCeeee--chHH--HHHHHHCC-CCeeecCCHHHHHHHH
Confidence 7889999999999999999999999998 888875 4664 23444321 3789999999997654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-21 Score=162.14 Aligned_cols=122 Identities=9% Similarity=0.162 Sum_probs=95.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCC--CCCc--eEecCC--------CCCcHH-HHHHHHhc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPD--RLYGLG--------TGPKVN-VLKQLQKK 201 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~--~~f~--~i~g~~--------~~pkp~-~l~~~~~~ 201 (268)
..++||+.++|+ ++|++++|+||.+...++..+++ +|+. .+|. .+++.+ .+|+|. .+..+.+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 358999999999 79999999999999999999996 9995 3443 333332 235554 44445556
Q ss_pred CCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 202 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 202 l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+++++|+||||+.+|+.++ + +|+.+++|.||.++..+.... .|++++.++.+|...|
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~~-~----~G~~~~~v~~~~~~~~~~~~~--~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQLY-E----KGYATKFIAYMEHIEREKVIN--LSKYVARNVAELASLI 218 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHHH-H----HTSCSEEEEECSSCCCHHHHH--HCSEEESSHHHHHHHH
T ss_pred hCCCCCCEEEEECCHhHHHHH-h----CCCCcEEEeccCccccHHHHh--hcceeeCCHHHHHHhh
Confidence 699999999999999999998 4 699999999998775444332 4789999999997765
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-22 Score=176.11 Aligned_cols=126 Identities=17% Similarity=0.167 Sum_probs=102.7
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHH---HHHHhcCCCCCCceEecCCC-----CCcHHHHHHHHhcCCCCC
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGLGT-----GPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~---~L~~~~gl~~~f~~i~g~~~-----~pkp~~l~~~~~~l~~~~ 206 (268)
...+|||+.++|+ ++|+++ |+||+....... .++. .++..+|+.+++.+. +|||.++..+++++|++|
T Consensus 135 ~~~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~ 212 (271)
T 1vjr_A 135 KTLTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDA-GSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPK 212 (271)
T ss_dssp TTCCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECH-HHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCG
T ss_pred CCcCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccc-cHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCC
Confidence 3468999999988 789998 999987543221 2232 344445666666543 599999999999999999
Q ss_pred CcEEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 207 LRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 207 ~~~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
++|+||||+ .+|+++|++ ||+.+++|.||++..+++......|++++.++.+|...||
T Consensus 213 ~e~i~iGD~~~nDi~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 213 ERMAMVGDRLYTDVKLGKN----AGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp GGEEEEESCHHHHHHHHHH----HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred ceEEEECCCcHHHHHHHHH----cCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 999999999 599999998 8999999999999888887766689999999999988875
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-20 Score=172.66 Aligned_cols=125 Identities=15% Similarity=-0.001 Sum_probs=110.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc--eEecCC---------------CCCcHHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLG---------------TGPKVNVLK 196 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~--~i~g~~---------------~~pkp~~l~ 196 (268)
...+|||+.++|+ ++|++++|+||++...++.+|++ +|+..+|+ .|++++ .||+|+++.
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~-lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-cCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 4589999999999 78999999999999999999996 99999999 788743 469999999
Q ss_pred HHHhcCC--------------CCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC---HHHHHhcCCCCCeeecC
Q 024375 197 QLQKKPE--------------HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT---PKERAEAASMPRIQLLQ 259 (268)
Q Consensus 197 ~~~~~l~--------------~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~---~~el~~~~~~P~~~~~~ 259 (268)
.++++++ ++|++|+||||+.+|+++|++ ||+++|+|.||++. .+++.. ..|++++.+
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~----AG~~~I~V~~g~~~~~~~~~l~~--~~ad~vi~s 365 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK----IGATFIGTLTGLKGKDAAGELEA--HHADYVINH 365 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH----HTCEEEEESCBTTBGGGHHHHHH--TTCSEEESS
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHH----cCCEEEEECCCccccccHHHHhh--cCCCEEECC
Confidence 9999999 899999999999999999998 89999999999963 444543 358899999
Q ss_pred hhHHhhhcC
Q 024375 260 LSDFCTKLK 268 (268)
Q Consensus 260 ~~~~~~~~~ 268 (268)
+.+|...|+
T Consensus 366 l~eL~~~l~ 374 (384)
T 1qyi_A 366 LGELRGVLD 374 (384)
T ss_dssp GGGHHHHHS
T ss_pred HHHHHHHHH
Confidence 999987663
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-21 Score=171.80 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=88.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 215 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs 215 (268)
.++||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++.+ |...+....+.+ +++||||+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~~~~---k~~~~k~~~~~~-----~~~~vGD~ 214 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFAEVLPHE---KAEKVKEVQQKY-----VTAMVGDG 214 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCGGG---HHHHHHHHHTTS-----CEEEEECT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhHhcCHHH---HHHHHHHHHhcC-----CEEEEeCC
Confidence 68999999998 78999999999999999999996 99999999888765 455555555544 78999999
Q ss_pred HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 216 LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 216 ~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
.+|+.++++ || ++|.||++...... .+++.+...++.++...|
T Consensus 215 ~nDi~~~~~----Ag---~~va~~~~~~~~~~--~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 215 VNDAPALAQ----AD---VGIAIGAGTDVAVE--TADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp TTTHHHHHH----SS---EEEECSCCSSSCCC--SSSEECSSCCTHHHHHHH
T ss_pred chhHHHHHh----CC---ceEEecCCcHHHHh--hCCEEEeCCCHHHHHHHH
Confidence 999999998 77 58999987654333 233333348888886654
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=153.87 Aligned_cols=113 Identities=13% Similarity=0.013 Sum_probs=87.9
Q ss_pred CCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec
Q 024375 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g 185 (268)
+++.+++.+....+.+.+.. ..+|||+.++|+ ++|++++|+||.+...++.++++ +|++.+|...+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~ 140 (232)
T 3fvv_A 71 AHSPVELAAWHEEFMRDVIR---------PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPE 140 (232)
T ss_dssp TSCHHHHHHHHHHHHHHTTG---------GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEE
T ss_pred CCCHHHHHHHHHHHHHHhhh---------hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceE
Confidence 56666666555544433211 258999999998 79999999999999999999996 999765543221
Q ss_pred ------------CCC--CCcHHHHHHHHhcCC---CCCCcEEEEcCcHhhHHHhhccCccCCCcEEE
Q 024375 186 ------------LGT--GPKVNVLKQLQKKPE---HQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 186 ------------~~~--~pkp~~l~~~~~~l~---~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~ 235 (268)
... ++|++.+..++++++ ++|++|+|||||.+|+.++++ ||++++.
T Consensus 141 ~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~----ag~~~~~ 203 (232)
T 3fvv_A 141 YRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEA----VTRPIAA 203 (232)
T ss_dssp EETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHH----SSEEEEE
T ss_pred EECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHh----CCCeEEE
Confidence 111 278899999999999 999999999999999999998 7877643
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-21 Score=165.11 Aligned_cols=94 Identities=14% Similarity=0.049 Sum_probs=77.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe-cC------CCCCcHHHHHHHHhcCCCCCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-GL------GTGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~-g~------~~~pkp~~l~~~~~~l~~~~~~ 208 (268)
.++||+.++|+ ++|++++|+||++...++.+++. +..+|+.++ |. ..||+|+++..+++++++
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~---l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~---- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT---LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI---- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH---HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH---HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence 46899999998 78999999999988766666662 334566552 21 246899999999999998
Q ss_pred EEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 209 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
|+||||+.+|+++|++ +|+++|+|.||+++.
T Consensus 161 ~l~VGDs~~Di~aA~~----aG~~~i~v~~g~~~~ 191 (211)
T 2b82_A 161 RIFYGDSDNDITAARD----VGARGIRILRASNST 191 (211)
T ss_dssp EEEEESSHHHHHHHHH----TTCEEEECCCCTTCS
T ss_pred EEEEECCHHHHHHHHH----CCCeEEEEecCCCCc
Confidence 9999999999999998 899999999999764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=164.88 Aligned_cols=119 Identities=14% Similarity=0.124 Sum_probs=95.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecC-----------C---CCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-----------G---TGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~-----------~---~~pkp~~l~~~~~ 200 (268)
..++||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.+++. + .+|||+++..+++
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 479999999999 79999999999999999999996 9999999877531 1 1489999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++|++|++|+||||+.+|+.+|++ ||+ +|.|+ .... +.. .+...+...++.++...|
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~----AG~---~va~~-~~~~-~~~-~a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEH----AGT---GIAWK-AKPV-VRE-KIHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSE---EEEES-CCHH-HHH-HCCEEESSSCGGGGGGGT
T ss_pred HcCCCcceEEEEeCCHHHHHHHHH----CCC---eEEeC-CCHH-HHH-hcCeeeCCCCHHHHHHHH
Confidence 999999999999999999999998 775 55565 3333 333 234445555777776655
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-20 Score=166.16 Aligned_cols=125 Identities=16% Similarity=0.177 Sum_probs=103.0
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHH--HHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFV--ETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~--~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
...+|||+.++|+ ++|+++ |+||+..... ..++....++..+|+.++|.+ .||+|+++..++++ ++|++
T Consensus 128 ~~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~ 204 (263)
T 1zjj_A 128 PDLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEE 204 (263)
T ss_dssp TTCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCE
T ss_pred CCCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCccc
Confidence 4578999999998 789998 9999987554 233321134555678888865 36999999999998 89999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
++||||+. +||.+|++ +|+++++|.||++..+++......|++++.++.+|...|+
T Consensus 205 ~~~VGD~~~~Di~~A~~----aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 205 LWMVGDRLDTDIAFAKK----FGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp EEEEESCTTTHHHHHHH----TTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred EEEECCChHHHHHHHHH----cCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 99999995 99999998 8999999999999888777655689999999999987764
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-20 Score=168.93 Aligned_cols=127 Identities=13% Similarity=0.151 Sum_probs=103.4
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHH--H-HHHHHhcC-CCCCCceEecCC----CCCcHHHHHHHHhcCCC
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFV--E-TLLRELAG-VTITPDRLYGLG----TGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~--~-~~L~~~~g-l~~~f~~i~g~~----~~pkp~~l~~~~~~l~~ 204 (268)
....+||++.++|+ ++|+ ++|+||++.... . .++.. +| +..+|+.+++.+ .||+|+++..+++++|+
T Consensus 153 ~~~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi 230 (306)
T 2oyc_A 153 DEHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPG-TGSLAAAVETASGRQALVVGKPSPYMFECITENFSI 230 (306)
T ss_dssp CTTCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEEC-HHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCC-CcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCC
Confidence 34578999999998 5688 999999987654 2 23332 44 555677777765 35999999999999999
Q ss_pred CCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHh------cCCCCCeeecChhHHhhhcC
Q 024375 205 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE------AASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 205 ~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~------~~~~P~~~~~~~~~~~~~~~ 268 (268)
+|++|+||||+. +|+++|++ +|+++++|.||++..+++.. ....|++++.++.+|...|+
T Consensus 231 ~~~e~l~vGD~~~~Di~~a~~----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 231 DPARTLMVGDRLETDILFGHR----CGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp CGGGEEEEESCTTTHHHHHHH----HTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred ChHHEEEECCCchHHHHHHHH----CCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 999999999996 99999998 89999999999998877754 34579999999999988764
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.4e-21 Score=169.15 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=95.7
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
....++|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.++ |+....++++++..+++|+|
T Consensus 132 ~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~-------p~~k~~~~~~l~~~~~~~~~ 203 (263)
T 2yj3_A 132 NISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNLS-------PEDKVRIIEKLKQNGNKVLM 203 (263)
Confidence 344689999999999 68999999999999999999996 99999998876 44557788888999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeee--cChhHHhhhc
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 267 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~--~~~~~~~~~~ 267 (268)
|||+.+|+.++++ || ++|.||+++... ...|++++ .++.+|...|
T Consensus 204 VGD~~~D~~aa~~----Ag---v~va~g~~~~~~----~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 204 IGDGVNDAAALAL----AD---VSVAMGNGVDIS----KNVADIILVSNDIGTLLGLI 250 (263)
Confidence 9999999999998 66 578999764322 23578999 8999887654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-20 Score=161.00 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=85.8
Q ss_pred CCccHHHHHH---hC-CCcEEEEcCCchHHHHHHHHHhcCCCCCCc---eEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 140 LYPGVSDALK---LA-SSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 140 lypGv~e~L~---~~-g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~---~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
.||++.+.++ ++ |+++ ++||.........+.. .++..+|+ .+.+.+ .+|||+++..+++++|+++++
T Consensus 132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~ 209 (271)
T 2x4d_A 132 SYQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLM-LDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQ 209 (271)
T ss_dssp CHHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEE-ECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGG
T ss_pred CHHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcc-cChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcce
Confidence 4667777766 34 7777 7776654332222221 22222222 122333 359999999999999999999
Q ss_pred EEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 209 ~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|++|||+. +|+.+|++ ||+.+++|.||.....+.......|++++.++.++...|
T Consensus 210 ~i~iGD~~~nDi~~a~~----aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 210 AVMIGDDIVGDVGGAQR----CGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp EEEEESCTTTTHHHHHH----TTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHH----CCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 99999998 99999998 899999999995544333332456999999999997654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-19 Score=147.67 Aligned_cols=112 Identities=12% Similarity=0.136 Sum_probs=87.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-----CCcHHHHHHHHhcCCCCCCc
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----GPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-----~pkp~~l~~~~~~l~~~~~~ 208 (268)
...++||+.++|+ ++|++++|+||++...++.+ ++ +|+..+|+.+...+. +|.|..-..+++++ ++++
T Consensus 77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~ 152 (201)
T 4ap9_A 77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGF 152 (201)
T ss_dssp GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCc
Confidence 3589999999999 78999999999999999999 85 999877666654331 13443344566666 8899
Q ss_pred EEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 209 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 209 ~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+||||+.+|+.+|++ ||++ +++ +.+.. .+++++.++.+|...|
T Consensus 153 ~i~iGD~~~Di~~~~~----ag~~-v~~--~~~~~--------~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 153 ILAMGDGYADAKMFER----ADMG-IAV--GREIP--------GADLLVKDLKELVDFI 196 (201)
T ss_dssp EEEEECTTCCHHHHHH----CSEE-EEE--SSCCT--------TCSEEESSHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHh----CCce-EEE--CCCCc--------cccEEEccHHHHHHHH
Confidence 9999999999999999 7875 444 43332 5789999999987665
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=156.50 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=89.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe--------c---CC---CCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--------G---LG---TGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~--------g---~~---~~pkp~~l~~~~~ 200 (268)
.+++||+.++|+ ++|++++|+||.....++.++++ +|++.+|+..+ | .+ .+|||+++..+++
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 479999999999 78999999999999999999996 99988776422 1 11 2399999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHhhh
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTK 266 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~~~ 266 (268)
++|++|++|+||||+.+|+.+|++ ||+.+ .|+ .. ..+++. +++++. ++.++...
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~----aG~~v---a~~-~~-~~~~~~---ad~~i~~~~l~~ll~~ 389 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAA----AGLGI---AFN-AK-PALREV---ADASLSHPYLDTVLFL 389 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSEEE---EES-CC-HHHHHH---CSEEECSSCTTHHHHH
T ss_pred HcCcChhhEEEEECCHHHHHHHHH----CCCeE---EEC-CC-HHHHHh---CCEEEccCCHHHHHHH
Confidence 999999999999999999999998 77644 453 33 334432 345544 44555443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-19 Score=159.34 Aligned_cols=123 Identities=14% Similarity=0.134 Sum_probs=88.7
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHH---HHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~---~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
...|+++.+.+. ..+. ..++||+...... ..+.. .++..+|+.+++.+ .||||..+..+++.+|+++++
T Consensus 125 ~~~~~~~~~~~~~l~~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 202 (266)
T 3pdw_A 125 SITYEKFAVGCLAIRNGA-RFISTNGDIAIPTERGLLPGN-GSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSE 202 (266)
T ss_dssp TCCHHHHHHHHHHHHTTC-EEEESCCCCEEEETTEEEECH-HHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGG
T ss_pred CCCHHHHHHHHHHHHCCC-eEEEEcCCceeECCCceEecc-hHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhh
Confidence 457899988887 5555 6788987643210 00000 11223345555544 359999999999999999999
Q ss_pred EEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 209 LHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 209 ~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
++||||+ .+|+.+|++ +|+.+++|.||++..++++.....|++++.++.+|..+
T Consensus 203 ~~~iGD~~~~Di~~~~~----aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~ 257 (266)
T 3pdw_A 203 TLMVGDNYATDIMAGIN----AGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPY 257 (266)
T ss_dssp EEEEESCTTTHHHHHHH----HTCEEEEECCC------CCTTSCCCSEEESSGGGGHHH
T ss_pred EEEECCCcHHHHHHHHH----CCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHH
Confidence 9999999 799999998 89999999999998887776556799999999999775
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-18 Score=152.67 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=90.9
Q ss_pred CCCccHHHHHH---hC-CCcEEEEcCC---------------------chHHHHHHHHHhcCCCCCCceE----------
Q 024375 139 RLYPGVSDALK---LA-SSRIYIVTSN---------------------QSRFVETLLRELAGVTITPDRL---------- 183 (268)
Q Consensus 139 ~lypGv~e~L~---~~-g~~l~IvTnK---------------------~~~~~~~~L~~~~gl~~~f~~i---------- 183 (268)
.++|++.++|+ ++ |+++++.|++ ....+..+|++ +|+..+|..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEE-YGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHH-HTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHH-cCCCEEEEEccccccCCCCc
Confidence 57899999998 44 9999999988 77888999995 9988777654
Q ss_pred ecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 184 YGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 184 ~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
++.+ .++|++.+..+++++|+++++|+||||+.+|+.++++ || ++|.||.+..+ ++.. +++++.+
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~----ag---~~~~~~~~~~~-~~~~---a~~v~~~ 269 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQT----VG---NGYLLKNATQE-AKNL---HNLITDS 269 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTT----SS---EEEECTTCCHH-HHHH---CCCBCSS
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHh----CC---cEEEECCccHH-HHHh---CCEEcCC
Confidence 3322 2499999999999999999999999999999999998 66 67888887655 4432 4678877
Q ss_pred hhH
Q 024375 260 LSD 262 (268)
Q Consensus 260 ~~~ 262 (268)
+.+
T Consensus 270 ~~~ 272 (289)
T 3gyg_A 270 EYS 272 (289)
T ss_dssp CHH
T ss_pred CCc
Confidence 665
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.75 E-value=8.2e-20 Score=160.38 Aligned_cols=121 Identities=16% Similarity=0.192 Sum_probs=91.7
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHH---HHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~---~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~ 208 (268)
...|+++.+.+. .+|. ..|+||+...... .++.. .++..+|+.+++.+ .||+|+++..+++++|++|++
T Consensus 124 ~~~~~~~~~~~~~l~~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 201 (264)
T 3epr_A 124 NVTYDKLATATLAIQNGA-LFIGTNPDLNIPTERGLLPGA-GSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQ 201 (264)
T ss_dssp TCCHHHHHHHHHHHHTTC-EEEESCCCSEEEETTEEEECH-HHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGG
T ss_pred CCCHHHHHHHHHHHHCCC-eEEEEcCCccccCCCceecCc-cHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCccc
Confidence 346788888777 5665 4588887632110 00000 11222455555554 359999999999999999999
Q ss_pred EEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 209 LHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 209 ~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
++||||+ .+|+.+|++ +|+++|+|.||++..+++......|++++.++++|.
T Consensus 202 ~~~vGD~~~~Di~~a~~----aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 202 AVMVGDNYLTDIMAGIN----NDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp EEEEESCTTTHHHHHHH----HTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred EEEECCCcHHHHHHHHH----CCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 9999999 699999998 899999999999999888876668999999999874
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=140.31 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=86.2
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.|+++|++++|+||++...++.++++ +|+..+|+.+ ++||+.+..+++++|+++++|+||||+.+|+.+++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~-----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~ 127 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR-----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIR 127 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc-----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHH
Confidence 45555589999999999999999999996 9998887765 68999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC------hhHHhhh
Q 024375 224 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ------LSDFCTK 266 (268)
Q Consensus 224 ~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~------~~~~~~~ 266 (268)
+ ||+. +.+|.+... .+. .+++++.+ +.++...
T Consensus 128 ~----ag~~---~~~~~~~~~-~~~---~ad~v~~~~~~~G~~~~l~~~ 165 (189)
T 3mn1_A 128 R----VGLG---MAVANAASF-VRE---HAHGITRAQGGEGAAREFCEL 165 (189)
T ss_dssp H----SSEE---EECTTSCHH-HHH---TSSEECSSCTTTTHHHHHHHH
T ss_pred H----CCCe---EEeCCccHH-HHH---hCCEEecCCCCCcHHHHHHHH
Confidence 8 6754 456655443 333 35788888 4555443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-18 Score=148.16 Aligned_cols=120 Identities=25% Similarity=0.229 Sum_probs=102.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceE-ecC-----------C
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRL-YGL-----------G 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i-~g~-----------~ 187 (268)
..++||+.++|+ ++|++++|+||++. ..+...|++ +|+. |+.+ ++. +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--~~~~~~~~~~~~g~~~~~~~ 131 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVF--VDMVLACAYHEAGVGPLAIP 131 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCCTTCCSTTCCS
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCc--eeeEEEeecCCCCceeeccc
Confidence 578999999999 68999999999998 789999996 9985 5543 332 2
Q ss_pred ----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE-EEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 188 ----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 188 ----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~-i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
.||+|+++..++++++++|++++||||+.+|+.+|++ +|+++ ++|.||+...+. ....|++++.++.+
T Consensus 132 ~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~----aG~~~~i~v~~g~~~~~~---~~~~~~~~i~~l~e 204 (218)
T 2o2x_A 132 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR----AGLAQGWLVDGEAAVQPG---FAIRPLRDSSELGD 204 (218)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH----TTCSEEEEETCCCEEETT---EEEEEESSHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHH----CCCCEeEEEecCCCCccc---ccCCCCEecccHHH
Confidence 3599999999999999999999999999999999998 89999 999999875542 23468899999999
Q ss_pred Hhhhc
Q 024375 263 FCTKL 267 (268)
Q Consensus 263 ~~~~~ 267 (268)
|...|
T Consensus 205 l~~~l 209 (218)
T 2o2x_A 205 LLAAI 209 (218)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-18 Score=136.92 Aligned_cols=105 Identities=10% Similarity=0.044 Sum_probs=93.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
.+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.+++++ .||+|+++..++++++++|++++|
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 96 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVL 96 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 36899999998 78999999999999999999996 99999999999753 469999999999999999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
|||+.+|+++|++ +|+.++++.||....+.+.+
T Consensus 97 vgD~~~di~~a~~----~G~~~i~~~~~~~~~~~l~~ 129 (137)
T 2pr7_A 97 VDDSILNVRGAVE----AGLVGVYYQQFDRAVVEIVG 129 (137)
T ss_dssp EESCHHHHHHHHH----HTCEEEECSCHHHHHHHHHH
T ss_pred EcCCHHHHHHHHH----CCCEEEEeCChHHHHHHHHH
Confidence 9999999999998 89999999998765555544
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-18 Score=142.55 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=84.8
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.|+++|++++|+||++...++.++++ +|+. +|. + .+|||+.+..+++++++++++++||||+.+|+.+++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-~~~---~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~ 119 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARK-LKIP-VLH---G--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFA 119 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-EEE---S--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-eEe---C--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHH
Confidence 45555589999999999999999999996 9987 322 2 279999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC------hhHHhhhc
Q 024375 224 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ------LSDFCTKL 267 (268)
Q Consensus 224 ~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~------~~~~~~~~ 267 (268)
+ || +++.+|..... ++. .+++++.+ +.++...|
T Consensus 120 ~----ag---~~v~~~~~~~~-~~~---~ad~v~~~~~~~g~~~~l~~~l 158 (176)
T 3mmz_A 120 L----VG---WPVAVASAHDV-VRG---AARAVTTVPGGDGAIREIASWI 158 (176)
T ss_dssp H----SS---EEEECTTCCHH-HHH---HSSEECSSCTTTTHHHHHHHHH
T ss_pred H----CC---CeEECCChhHH-HHH---hCCEEecCCCCCcHHHHHHHHH
Confidence 8 66 45667765554 333 24688888 66765543
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-17 Score=135.50 Aligned_cols=99 Identities=12% Similarity=-0.015 Sum_probs=81.0
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+++..++++++++|++++||||+.+|+.+|+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~ 112 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV-----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLK 112 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc-----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 44555589999999999999999999996 9998776653 79999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 224 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 224 ~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
+ +|+.++ ++-+.. +.++ .+++++.+
T Consensus 113 ~----ag~~~~---~~~~~~-~~~~---~ad~v~~~ 137 (164)
T 3e8m_A 113 R----VGIAGV---PASAPF-YIRR---LSTIFLEK 137 (164)
T ss_dssp T----SSEEEC---CTTSCH-HHHT---TCSSCCCC
T ss_pred H----CCCeEE---cCChHH-HHHH---hCcEEecc
Confidence 8 776443 444433 3433 36788877
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.5e-18 Score=136.82 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=82.8
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhh
Q 024375 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 218 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~D 218 (268)
|+..++|+ ++|++++|+||++...++.++++ +|+..+|+. .+|||+++..++++++++|++++||||+.+|
T Consensus 39 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~D 112 (162)
T 2p9j_A 39 VLDGIGIKLLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG-----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVD 112 (162)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC-----C--CHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 45566666 68999999999999999999996 998876643 4699999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 219 LKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 219 i~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+.+|++ +|++++ +.+| . +++.. .+++++.++.+
T Consensus 113 i~~a~~----ag~~~~-~~~~--~-~~~~~---~a~~v~~~~~~ 145 (162)
T 2p9j_A 113 IEVMKK----VGFPVA-VRNA--V-EEVRK---VAVYITQRNGG 145 (162)
T ss_dssp HHHHHH----SSEEEE-CTTS--C-HHHHH---HCSEECSSCSS
T ss_pred HHHHHH----CCCeEE-ecCc--c-HHHHh---hCCEEecCCCC
Confidence 999998 788755 3333 3 33443 36788888654
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-18 Score=149.57 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=81.5
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||++++.+++++|+++++|+||||+.+|+.+++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~-----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~ 157 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ-----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMA 157 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC-----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc-----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHH
Confidence 45555589999999999999999999996 9998777654 79999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 224 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 224 ~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
+ ||+++ ..+-+.. +.+ ..+++++.++
T Consensus 158 ~----ag~~~---a~~~~~~-~~~---~~Ad~v~~~~ 183 (211)
T 3ij5_A 158 Q----VGLSV---AVADAHP-LLL---PKAHYVTRIK 183 (211)
T ss_dssp T----SSEEE---ECTTSCT-TTG---GGSSEECSSC
T ss_pred H----CCCEE---EeCCccH-HHH---hhCCEEEeCC
Confidence 8 77553 3343332 222 2367888876
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.5e-17 Score=155.01 Aligned_cols=97 Identities=21% Similarity=0.208 Sum_probs=82.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc---------h---HHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQ---------S---RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 199 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~---------~---~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~ 199 (268)
.+|||+.++|+ ++|++++|+||++ . ..++.+|++ +|+. |+.+++++ .||+|+++..++
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~--fd~i~~~~~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSTTSTTSSHHHHHHH
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCC--EEEEEECCCCCCCCCCHHHHHHHH
Confidence 38999999999 7999999999987 2 338899996 9984 89999865 359999999999
Q ss_pred hcCC----CCCCcEEEEcCcH-----------------hhHHHhhccCccCCCcEEEEecCCCC
Q 024375 200 KKPE----HQGLRLHFVEDRL-----------------ATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 200 ~~l~----~~~~~~~~VGDs~-----------------~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
++++ ++|++|+||||+. +|+.+|++ +|++++.....|..
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~----aGi~f~~pe~~f~~ 223 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN----VGLPFATPEEFFLK 223 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHH----HTCCEECHHHHHSC
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHH----cCCcccCcHHhhCC
Confidence 9997 9999999999997 89999998 89998765555543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-17 Score=147.42 Aligned_cols=118 Identities=13% Similarity=0.143 Sum_probs=90.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe--------c---CC---CCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--------G---LG---TGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~--------g---~~---~~pkp~~l~~~~~ 200 (268)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+..+ | .+ .+|||+++..+++
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 579999999999 78999999999999999999996 99988776532 1 12 1399999999999
Q ss_pred cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 201 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 201 ~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
++|+++++|+||||+.+|+.++++ ||+. |.| .+. +.+++ .++..+...++.++...
T Consensus 256 ~lgi~~~~~v~vGDs~nDi~~a~~----aG~~---va~-~~~-~~~~~-~a~~v~~~~~l~~v~~~ 311 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGANDLVMMAA----AGLG---VAY-HAK-PKVEA-KAQTAVRFAGLGGVVCI 311 (335)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHH----SSEE---EEE-SCC-HHHHT-TSSEEESSSCTHHHHHH
T ss_pred HcCCChhhEEEEeCCHHHHHHHHH----CCCe---EEe-CCC-HHHHh-hCCEEEecCCHHHHHHH
Confidence 999999999999999999999998 7764 445 233 33433 23433444455555443
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=139.75 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=68.9
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCc-HhhHHHhhccCccCCCcEEEEecCCCCHHHHH----hcCCCCCeeecChhHH
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERA----EAASMPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs-~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~----~~~~~P~~~~~~~~~~ 263 (268)
||+|.++..+++++|+++++++||||+ .+|+.+|++ +|+++++|.||++..+++. .....|++++.++.+|
T Consensus 187 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~----~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKA----IGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH----HTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred CCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHH----CCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 499999999999999999999999999 599999998 8999999999999887776 5556899999999999
Q ss_pred hhhcC
Q 024375 264 CTKLK 268 (268)
Q Consensus 264 ~~~~~ 268 (268)
...|+
T Consensus 263 ~~~l~ 267 (268)
T 3qgm_A 263 VEALE 267 (268)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 88774
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-17 Score=147.36 Aligned_cols=95 Identities=20% Similarity=0.149 Sum_probs=81.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHh--------cCCCCCCceEecCC---CCCcHHHHHHHHh
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLREL--------AGVTITPDRLYGLG---TGPKVNVLKQLQK 200 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~--------~gl~~~f~~i~g~~---~~pkp~~l~~~~~ 200 (268)
+.+|||+.++|+ ++|++++|+|||+... +...|+ + +|+ +|+.+++.+ .||+|+++..+++
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~-~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYR-MTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFW 263 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHH-HHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHH-hcccccccccCC--CchheeeccCCCCcHHHHHHHHHHH
Confidence 457999999999 7999999999999764 466777 5 788 588888654 3599999999999
Q ss_pred cCCCCCCc-EEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 201 KPEHQGLR-LHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 201 ~l~~~~~~-~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
+++.++.+ ++|||||.+|+++|++ ||+++|+|+||
T Consensus 264 ~~~~~~~~~~~~vgD~~~di~~a~~----aG~~~~~v~~G 299 (301)
T 1ltq_A 264 KHIAPHFDVKLAIDDRTQVVEMWRR----IGVECWQVASG 299 (301)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHH----TTCCEEECSCC
T ss_pred HHhccccceEEEeCCcHHHHHHHHH----cCCeEEEecCC
Confidence 99877655 7999999999999998 89999999999
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-17 Score=138.90 Aligned_cols=100 Identities=17% Similarity=0.190 Sum_probs=84.4
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhcCCCCCCceEe-c-----CC---C
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-G-----LG---T 188 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK---------------~~~~~~~~L~~~~gl~~~f~~i~-g-----~~---~ 188 (268)
....+|||+.++|+ ++|++++|+||+ +...++.+|++ +|+. |+.|+ + .+ .
T Consensus 39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~v~~s~~~~~~~~~~~ 115 (176)
T 2fpr_A 39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDCR 115 (176)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSSS
T ss_pred HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCC--eeEEEEcCCCCccccccc
Confidence 44689999999999 789999999999 78899999996 9987 88875 3 22 3
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
||+|+++..++++++++|++|+||||+..|+++|++ +|+++|+|.+|-..
T Consensus 116 KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~----aG~~~i~v~~~~~~ 165 (176)
T 2fpr_A 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN----MGINGLRYDRETLN 165 (176)
T ss_dssp TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHH----HTSEEEECBTTTBC
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH----cCCeEEEEcCCccc
Confidence 599999999999999999999999999999999998 89999999998543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-16 Score=140.09 Aligned_cols=108 Identities=16% Similarity=0.084 Sum_probs=81.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhcCCC--CCCceEecCCCCCcHHHHHHHHhcCCCCCCcE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVT--ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---~~~~~~~L~~~~gl~--~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
..++||+.++|+ ++|++++|+||++ ...+...|+. +|+. .+|+.+++.+...||++...+.+ .+ ...+
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~~v~~~~vi~~~~~~~K~~~~~~~~~-~~--~~~~ 175 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAPQATKEHILLQDPKEKGKEKRRELVS-QT--HDIV 175 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCSSCSTTTEEEECTTCCSSHHHHHHHH-HH--EEEE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCCcCCCceEEECCCCCCCcHHHHHHHH-hC--CCce
Confidence 578999999999 7999999999999 6778888996 9998 78898888764344444444432 23 2348
Q ss_pred EEEcCcHhhHHHhh-------c-----cCccCCCcEEEEecCCCCHHHHHhc
Q 024375 210 HFVEDRLATLKNVI-------K-----EPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 210 ~~VGDs~~Di~aa~-------~-----~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
+||||+.+|+.+|+ + ....+|+++|.+.|+.....+-.-+
T Consensus 176 l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~~~~~ 227 (258)
T 2i33_A 176 LFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWEGALY 227 (258)
T ss_dssp EEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHHHHHT
T ss_pred EEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhhhhhc
Confidence 99999999999994 1 1122799999999997666544333
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-18 Score=152.73 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=100.5
Q ss_pred CCccHHHHHHhCCCcEEEEcCCchHHH--H--HHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcC----CCCCC
Q 024375 140 LYPGVSDALKLASSRIYIVTSNQSRFV--E--TLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP----EHQGL 207 (268)
Q Consensus 140 lypGv~e~L~~~g~~l~IvTnK~~~~~--~--~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l----~~~~~ 207 (268)
.|+++.+.|+++|++ +|+||++.... . .+++. .|+..+|+.++|++ .||+|+++..+++++ |++|+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAI-GGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECH-HHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccC-ChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 677777777789999 99999987765 3 23453 67778899999876 369999999999999 99999
Q ss_pred cEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHH----hcCCCCCeeecChhHH
Q 024375 208 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA----EAASMPRIQLLQLSDF 263 (268)
Q Consensus 208 ~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~----~~~~~P~~~~~~~~~~ 263 (268)
+|+||||+. +||.+|++ +|+++|+|.||++..+++. .....|++++.++.+|
T Consensus 227 ~~~~VGD~~~~Di~~A~~----aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 227 EILMVGDTLHTDILGGNK----FGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp GEEEEESCTTTHHHHHHH----HTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred eEEEECCCcHHHHHHHHH----cCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 999999995 99999998 8999999999999887776 4456899999998875
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-16 Score=131.66 Aligned_cols=96 Identities=10% Similarity=0.016 Sum_probs=78.7
Q ss_pred HhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCcc
Q 024375 149 KLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 228 (268)
Q Consensus 149 ~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~ 228 (268)
+++|++++|+||++...+..++++ +|+..+|+. .+|||+.+.+++++++++|++++||||+.+|+.++++
T Consensus 48 ~~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~~-----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~---- 117 (180)
T 1k1e_A 48 MDADIQVAVLSGRDSPILRRRIAD-LGIKLFFLG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA---- 117 (180)
T ss_dssp HHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----
T ss_pred HHCCCeEEEEeCCCcHHHHHHHHH-cCCceeecC-----CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----
Confidence 378999999999999999999996 999866532 3699999999999999999999999999999999998
Q ss_pred CCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 229 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 229 agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
+|+.++ ++.+. ++++. .+++++.+..
T Consensus 118 ag~~~~---~~~~~-~~~~~---~ad~v~~~~~ 143 (180)
T 1k1e_A 118 CGTSFA---VADAP-IYVKN---AVDHVLSTHG 143 (180)
T ss_dssp SSEEEE---CTTSC-HHHHT---TSSEECSSCT
T ss_pred cCCeEE---eCCcc-HHHHh---hCCEEecCCC
Confidence 787654 34333 33433 4678888763
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=128.49 Aligned_cols=99 Identities=19% Similarity=0.144 Sum_probs=79.8
Q ss_pred HHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 145 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 145 ~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+.+..+++++++++++++||||+.+|+.++++
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~~-----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ 134 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQGQ-----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEK 134 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECSC-----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTT
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeCC-----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH
Confidence 3445589999999999999999999996 9998766543 799999999999999999999999999999999998
Q ss_pred cCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 225 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 225 ~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
+|+. +..|-... ++++ .+++++.+.
T Consensus 135 ----ag~~---va~~na~~-~~~~---~ad~v~~~~ 159 (195)
T 3n07_A 135 ----VALR---VCVADGHP-LLAQ---RANYVTHIK 159 (195)
T ss_dssp ----SSEE---EECTTSCH-HHHH---HCSEECSSC
T ss_pred ----CCCE---EEECChHH-HHHH---hCCEEEcCC
Confidence 6754 34453333 3443 256887764
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.61 E-value=5.4e-15 Score=127.44 Aligned_cols=94 Identities=10% Similarity=-0.065 Sum_probs=73.0
Q ss_pred EEEEc-CCchHHHHHHHHHhcCCCCCCceEecCC-------CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC
Q 024375 155 IYIVT-SNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 155 l~IvT-nK~~~~~~~~L~~~~gl~~~f~~i~g~~-------~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~ 226 (268)
++++| ++..+.++.++++ ++ .+|+.+.|.. .+||+..+..+++++|++++++++|||+.+|+.+++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~-- 187 (231)
T 1wr8_A 113 LVIMRETINVETVREIINE-LN--LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKV-- 187 (231)
T ss_dssp EEECTTTSCHHHHHHHHHH-TT--CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHH--
T ss_pred EEEECCCCCHHHHHHHHHh-cC--CcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH--
Confidence 57888 8889999999995 76 4677663321 2399999999999999999999999999999999998
Q ss_pred ccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 227 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 227 ~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+|+. ++ +|.+.. +++. .+++++.++.+
T Consensus 188 --ag~~-v~--~~~~~~-~~~~---~a~~v~~~~~e 214 (231)
T 1wr8_A 188 --VGYK-VA--VAQAPK-ILKE---NADYVTKKEYG 214 (231)
T ss_dssp --SSEE-EE--CTTSCH-HHHT---TCSEECSSCHH
T ss_pred --cCCe-EE--ecCCCH-HHHh---hCCEEecCCCc
Confidence 7765 44 454443 4543 47899888765
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-14 Score=127.95 Aligned_cols=108 Identities=15% Similarity=0.026 Sum_probs=73.6
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC--CCCCCceEecCC------C--CCcHHHHHHHHhcCCCCCC
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG------T--GPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g--l~~~f~~i~g~~------~--~pkp~~l~~~~~~l~~~~~ 207 (268)
++++.++++ ....++.+++++ .....+.+. +. +...+..+.+.. . .+|+..+..+++++|++++
T Consensus 138 ~~~~~~~~~~~~~~~~ki~~~~~~--~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 214 (279)
T 4dw8_A 138 IRETNDFLTDITLPVAKCLIVGDA--GKLIPVESE-LCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTRE 214 (279)
T ss_dssp EEECSCHHHHSCSCCSCEEEESCH--HHHHHHHHH-HHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGG
T ss_pred cccHHHHHHhhcCCceEEEEeCCH--HHHHHHHHH-HHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 334555554 567777777643 223333332 21 323456665432 1 2899999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
++++|||+.||+.+++. || ++|.||.+..+ +++. .++++.+..+
T Consensus 215 ~~i~~GD~~NDi~m~~~----ag---~~vam~na~~~-~k~~---A~~v~~~~~e 258 (279)
T 4dw8_A 215 EVIAIGDGYNDLSMIKF----AG---MGVAMGNAQEP-VKKA---ADYITLTNDE 258 (279)
T ss_dssp GEEEEECSGGGHHHHHH----SS---EEEECTTSCHH-HHHH---CSEECCCGGG
T ss_pred HEEEECCChhhHHHHHH----cC---cEEEcCCCcHH-HHHh---CCEEcCCCCC
Confidence 99999999999999998 66 78999987765 4443 4577776543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=133.84 Aligned_cols=99 Identities=8% Similarity=-0.011 Sum_probs=73.1
Q ss_pred hCCCcEEEE--cCCchHHHHHHHHHhcCCCCCCceEecCC-------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhH
Q 024375 150 LASSRIYIV--TSNQSRFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (268)
Q Consensus 150 ~~g~~l~Iv--TnK~~~~~~~~L~~~~gl~~~f~~i~g~~-------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di 219 (268)
+..+++.|+ +++.....+.+.+. ++ ..+..+.+.. .+ +|+..+..+++.+|++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~-~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPA-WN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHH-HT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHH-hc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 457889988 44445556666664 65 2345555443 12 799999999999999999999999999999
Q ss_pred HHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 220 KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 220 ~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
.+.+. || ++|.+|-+.++ +++. .+++..+..+
T Consensus 241 ~ml~~----ag---~~vam~na~~~-~k~~---A~~v~~s~~e 272 (283)
T 3dao_A 241 EMLQN----AG---ISYAVSNARQE-VIAA---AKHTCAPYWE 272 (283)
T ss_dssp HHHHH----SS---EEEEETTSCHH-HHHH---SSEEECCGGG
T ss_pred HHHHh----CC---CEEEcCCCCHH-HHHh---cCeECCCCCC
Confidence 99998 66 67777876654 4443 4688887765
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.5e-15 Score=131.26 Aligned_cols=97 Identities=6% Similarity=-0.090 Sum_probs=72.1
Q ss_pred CCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC---------C-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHH
Q 024375 151 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 220 (268)
Q Consensus 151 ~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~---------~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~ 220 (268)
.++...+++ ++......+++. ++.. |..+.+.. . .+|+..+..+++.+|++++++++|||+.||+.
T Consensus 155 ~~~~ki~~~-~~~~~~~~~~~~-l~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 155 QDIHKICLW-SNEKVFDEVKDI-LQDK--MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIV 230 (274)
T ss_dssp CCCCEEEEE-CCHHHHHHHHHH-HGGG--EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHH
T ss_pred cCeEEEEEE-cCHHHHHHHHHH-hhcc--eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHH
Confidence 344334444 777888888885 6542 45555432 1 28999999999999999999999999999999
Q ss_pred HhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 221 NVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 221 aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+++. || ++|.||.+..+ +++. +++++.+..+
T Consensus 231 m~~~----ag---~~vam~na~~~-~k~~---A~~v~~~~~e 261 (274)
T 3fzq_A 231 MFQA----SD---VTIAMKNSHQQ-LKDI---ATSICEDIFD 261 (274)
T ss_dssp HHHT----CS---EEEEETTSCHH-HHHH---CSEEECCGGG
T ss_pred HHHh----cC---ceEEecCccHH-HHHh---hhheeCCCch
Confidence 9998 66 78899988765 4433 4688877654
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-15 Score=132.83 Aligned_cols=97 Identities=12% Similarity=-0.016 Sum_probs=68.6
Q ss_pred CCcEEEEcCCchHHHHHHHHHhcC--CCC-CCceEecCC-------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHH
Q 024375 152 SSRIYIVTSNQSRFVETLLRELAG--VTI-TPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 220 (268)
Q Consensus 152 g~~l~IvTnK~~~~~~~~L~~~~g--l~~-~f~~i~g~~-------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~ 220 (268)
..++.+.++ . ...+.+++. +. +.. .+..+.+.. .+ +|+..+..+++++|++++++++|||+.||++
T Consensus 182 ~~ki~~~~~-~-~~~~~~~~~-l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~ 258 (304)
T 3l7y_A 182 FFKLTLQVK-E-EESAQIMKA-IADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIE 258 (304)
T ss_dssp EEEEEEECC-G-GGHHHHHHH-HHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred eEEEEEEcC-H-HHHHHHHHH-HHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHH
Confidence 345555553 3 333555553 32 333 456666543 12 7999999999999999999999999999999
Q ss_pred HhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 221 NVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 221 aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+++. || ++|.+|.+..+ +++. .++++.+..+
T Consensus 259 m~~~----ag---~~vam~na~~~-~k~~---Ad~v~~~~~e 289 (304)
T 3l7y_A 259 MLKL----AK---YSYAMANAPKN-VKAA---ANYQAKSNDE 289 (304)
T ss_dssp HHHH----CT---EEEECTTSCHH-HHHH---CSEECCCGGG
T ss_pred HHHh----cC---CeEEcCCcCHH-HHHh---ccEEcCCCCc
Confidence 9998 66 78888977665 4443 3588877655
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=8.9e-15 Score=129.24 Aligned_cols=112 Identities=12% Similarity=0.040 Sum_probs=76.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-------C-CCcHHHHHHHHhcCCCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------T-GPKVNVLKQLQKKPEHQG 206 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-------~-~pkp~~l~~~~~~l~~~~ 206 (268)
..+++++.++++ ....++.+.++ +. ....+++........+..+.+.. . .+|+..+..+++++|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~ki~~~~~-~~-~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~ 218 (290)
T 3dnp_A 141 VQFVESLSDLLMDEPVSAPVIEVYTE-HD-IQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSM 218 (290)
T ss_dssp EEECSCHHHHHHHSCCCCSEEEEECC-GG-GHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCG
T ss_pred ccccCCHHHHHhcCCCCceEEEEeCC-HH-HHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCH
Confidence 345788888887 46778855433 33 33444442111122345555432 1 289999999999999999
Q ss_pred CcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 207 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 207 ~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+++++|||+.+|+.+++. || ++|.+|-+..+ +++. .+++..+..+
T Consensus 219 ~~~i~~GD~~NDi~m~~~----ag---~~vam~na~~~-~k~~---Ad~v~~s~~e 263 (290)
T 3dnp_A 219 DDVVAIGHQYDDLPMIEL----AG---LGVAMGNAVPE-IKRK---ADWVTRSNDE 263 (290)
T ss_dssp GGEEEEECSGGGHHHHHH----SS---EEEECTTSCHH-HHHH---SSEECCCTTT
T ss_pred HHEEEECCchhhHHHHHh----cC---CEEEecCCcHH-HHHh---cCEECCCCCc
Confidence 999999999999999998 66 57888876654 4443 3577777655
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.3e-14 Score=124.10 Aligned_cols=93 Identities=13% Similarity=0.027 Sum_probs=58.2
Q ss_pred EEcCCchHHHHHHHHHhcC--CCCCCceEecCCC-------C-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccC
Q 024375 157 IVTSNQSRFVETLLRELAG--VTITPDRLYGLGT-------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~g--l~~~f~~i~g~~~-------~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~ 226 (268)
|++..+......+++. +. +...+..+.+... + +|+..++.+++.+|++++++++|||+.+|+++++.
T Consensus 155 i~~~~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~-- 231 (279)
T 3mpo_A 155 AMFVDYPQVIEQVKAN-MPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKY-- 231 (279)
T ss_dssp EEEECCHHHHHHHHHH-CCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHH--
T ss_pred EEEcCCHHHHHHHHHH-HHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHh--
Confidence 3334556666677764 43 1122444544331 1 59999999999999999999999999999999998
Q ss_pred ccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 227 ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 227 ~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
|| ++|.+|.+.++ +++. .+++..+..
T Consensus 232 --ag---~~vam~na~~~-~k~~---A~~v~~~~~ 257 (279)
T 3mpo_A 232 --AG---LGVAMGNAIDE-VKEA---AQAVTLTNA 257 (279)
T ss_dssp --ST---EECBC---CCH-HHHH---CSCBC----
T ss_pred --cC---ceeeccCCCHH-HHHh---cceeccCCC
Confidence 66 78888876654 4443 346665543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-14 Score=127.54 Aligned_cols=91 Identities=10% Similarity=-0.055 Sum_probs=63.8
Q ss_pred hCCCcEEEEcCCchHHHHHHHHH---hcCCCCCCceEecCC-------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhh
Q 024375 150 LASSRIYIVTSNQSRFVETLLRE---LAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLAT 218 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~---~~gl~~~f~~i~g~~-------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~D 218 (268)
..++...++++++......+.+. .++ ..+..+.+.. .+ +|+..+..+++.+|++++++++|||+.||
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~ND 237 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQAMNARWG--DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMND 237 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHHHHHHHG--GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred CCCceEEEEeCCCHHHHHHHHHHHHHHhc--CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhh
Confidence 35555667776555544444332 133 2234444432 12 79999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 219 LKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 219 i~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
+++.+. || ++|.+|.+..+-.+.+
T Consensus 238 i~ml~~----ag---~~vAm~Na~~~vk~~A 261 (285)
T 3pgv_A 238 AEMLSM----AG---KGCIMANAHQRLKDLH 261 (285)
T ss_dssp HHHHHH----SS---EEEECTTSCHHHHHHC
T ss_pred HHHHHh----cC---CEEEccCCCHHHHHhC
Confidence 999998 66 8899998776544443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.6e-14 Score=124.25 Aligned_cols=99 Identities=7% Similarity=-0.041 Sum_probs=74.3
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcC--CCCCCceEecCC-------C-CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhH
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLG-------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~g--l~~~f~~i~g~~-------~-~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di 219 (268)
+.+++++|+|++.. +..+++. ++ +..+|+.+.+.. . .+|+..+..+++.+|++++++++|||+.+|+
T Consensus 144 ~~~~ki~i~~~~~~--~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~ 220 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IPLVIDK-LHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDA 220 (271)
T ss_dssp SCEEEEEEECCGGG--HHHHHHH-HHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CceEEEEEEcCHHH--HHHHHHH-HHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence 46889999998754 5556553 44 555677777652 1 2999999999999999999999999999999
Q ss_pred HHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 220 KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 220 ~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
.+++. +|+ +|.+|.+.. +++.. +++++.+..+
T Consensus 221 ~m~~~----ag~---~va~~na~~-~~k~~---a~~v~~~~~~ 252 (271)
T 1rlm_A 221 EMLKM----ARY---SFAMGNAAE-NIKQI---ARYATDDNNH 252 (271)
T ss_dssp HHHHH----CSE---EEECTTCCH-HHHHH---CSEECCCGGG
T ss_pred HHHHH----cCC---eEEeCCccH-HHHHh---CCeeCcCCCC
Confidence 99998 675 455776654 45442 5688777654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.41 E-value=8.4e-14 Score=123.31 Aligned_cols=97 Identities=13% Similarity=0.156 Sum_probs=76.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHhcCCCCCC--ceEecCCCCCcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~----~~~~~~L~~~~gl~~~f--~~i~g~~~~pkp~~l~~~~~~l~~~~~ 207 (268)
..+++||+.++|+ ++|++++||||++. +.+...|++ +|+..++ ..+...+...|......+.+. |..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~-Gy~-- 174 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKDKSAKAARFAEIEKQ-GYE-- 174 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESSCSCCHHHHHHHHHT-TEE--
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCCCCChHHHHHHHHhc-CCC--
Confidence 3689999999999 79999999999976 599999996 9998777 444444444677766666654 332
Q ss_pred cEEEEcCcHhhHHH--------hhccCccCCCcEEEEecCCC
Q 024375 208 RLHFVEDRLATLKN--------VIKEPELDGWNLYLVDWGYN 241 (268)
Q Consensus 208 ~~~~VGDs~~Di~a--------a~~~~~~agi~~i~v~wGy~ 241 (268)
-++||||..+|+.+ +++ ++|..+++.||..
T Consensus 175 iv~~vGD~~~Dl~~~~~~~~~~~r~----a~v~~~~~~fG~~ 212 (262)
T 3ocu_A 175 IVLYVGDNLDDFGNTVYGKLNADRR----AFVDQNQGKFGKT 212 (262)
T ss_dssp EEEEEESSGGGGCSTTTTCCHHHHH----HHHHHTGGGBTTT
T ss_pred EEEEECCChHHhccccccCCHHHHH----HHHHHHHHHhCCC
Confidence 38999999999998 555 6788889999964
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.5e-13 Score=116.47 Aligned_cols=67 Identities=6% Similarity=-0.024 Sum_probs=55.9
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH--Hhhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD--FCTKL 267 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~--~~~~~ 267 (268)
+|+..+..+++++|++++++++|||+.+|+.+++. +|+ +|.||.... +++. .+++++.+..+ +...|
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~----ag~---~v~~~n~~~-~~~~---~a~~v~~~~~~dGv~~~l 255 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRH----AAI---GVAMGQAKE-DVKA---AADYVTAPIDEDGISKAM 255 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE---EEECTTSCH-HHHH---HSSEECCCGGGTHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----cCc---eEEecCccH-HHHh---hCCEEeccCchhhHHHHH
Confidence 99999999999999999999999999999999998 664 677886654 4543 36799999988 76544
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-12 Score=109.73 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=80.7
Q ss_pred HHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 145 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 145 ~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.+.|+++|++++|+||++...++.++++ +|+..+|+.+ +|||+.+..++++++++|++++||||+.+|+.++++
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ 128 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ-----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQ 128 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC-----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC-----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 4555689999999999999999999996 9998776654 799999999999999999999999999999999998
Q ss_pred cCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 225 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 225 ~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
+|+.+ ..+-+.. +... .+++++.+
T Consensus 129 ----ag~~~---~~~~~~~-~~~~---~ad~v~~~ 152 (191)
T 3n1u_A 129 ----VGLGV---AVSNAVP-QVLE---FADWRTER 152 (191)
T ss_dssp ----SSEEE---ECTTCCH-HHHH---HSSEECSS
T ss_pred ----CCCEE---EeCCccH-HHHH---hCCEEecC
Confidence 77664 3454443 3333 25688877
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-13 Score=120.08 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=74.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHhcCCCCCCc--eEecCCCCCcHHHHHHHHhcCCCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITPD--RLYGLGTGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~----~~~~~~L~~~~gl~~~f~--~i~g~~~~pkp~~l~~~~~~l~~~~~ 207 (268)
..++|||+.++|+ ++|++++|+||++. +.+...|++ +|+..+++ .+.+.+...|......+.+ .|. .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~L~~-~gy--~ 174 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKDKSNKSVRFKQVED-MGY--D 174 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESSCSSSHHHHHHHHT-TTC--E
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCCCCChHHHHHHHHh-cCC--C
Confidence 3689999999999 79999999999976 499999996 99987774 4544443355555555444 343 3
Q ss_pred cEEEEcCcHhhHHH--------hhccCccCCCcEEEEecCCC
Q 024375 208 RLHFVEDRLATLKN--------VIKEPELDGWNLYLVDWGYN 241 (268)
Q Consensus 208 ~~~~VGDs~~Di~a--------a~~~~~~agi~~i~v~wGy~ 241 (268)
-++||||+.+|+.+ +++ ++|..+++.||..
T Consensus 175 iv~~iGD~~~Dl~~~~~~~~~~~r~----a~v~~~~~~fG~~ 212 (260)
T 3pct_A 175 IVLFVGDNLNDFGDATYKKSNAERR----DFVAKNSKAFGKK 212 (260)
T ss_dssp EEEEEESSGGGGCGGGTTCCHHHHH----HHHHHTGGGBTTT
T ss_pred EEEEECCChHHcCcccccCCHHHHH----HHHHHHHHHhCCC
Confidence 38999999999998 565 7788899999964
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=8.1e-12 Score=108.88 Aligned_cols=62 Identities=10% Similarity=-0.001 Sum_probs=52.1
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+|+..+..+++.+|++++++++|||+.||+.+++. || ++|.+|.+.+ +++++ ++++..+..+
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~----ag---~~vam~na~~-~~k~~---Ad~v~~~~~e 255 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKA----AG---IGVAMGNASE-KVQSV---ADFVTDTVDN 255 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH----SS---EEEECTTSCH-HHHHT---CSEECCCTTT
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHh----CC---CeEEeCCCcH-HHHHh---cCEeeCCCCc
Confidence 89999999999999999999999999999999998 66 7788897665 45543 4688777543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-12 Score=107.77 Aligned_cols=100 Identities=15% Similarity=0.078 Sum_probs=81.1
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.|+++|++++|+||++...++.++++ +|+..+|+. .+|||+.+..+++++|++|++++||||+.+|+.+|+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~-----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~ 134 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG-----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVME 134 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS-----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 45555588999999999999999999996 998765542 379999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 224 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 224 ~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
+ +|+.++ +|.+.. ++.. .+++++.++
T Consensus 135 ~----ag~~~~---~~~~~~-~~~~---~ad~v~~~~ 160 (188)
T 2r8e_A 135 K----VGLSVA---VADAHP-LLIP---RADYVTRIA 160 (188)
T ss_dssp T----SSEEEE---CTTSCT-TTGG---GSSEECSSC
T ss_pred H----CCCEEE---ecCcCH-HHHh---cCCEEEeCC
Confidence 8 777653 454332 2332 367998886
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.34 E-value=3.3e-12 Score=111.01 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=50.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
.|...+..+++.+|++++++++|||+.||+.+++. ||+ +|.+|... +++++. .+++..+..+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~----ag~---~vam~na~-~~~k~~---A~~v~~~~~~ 244 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSF----VGT---GVAMGNAH-EEVKRV---ADFVTKPVDK 244 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHH----SSE---EEEETTCC-HHHHHT---CSEEECCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHh----CCc---EEEeCCCc-HHHHHh---CCEEeCCCCc
Confidence 79999999999999999999999999999999998 675 55568544 456553 5688877654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.2e-11 Score=106.98 Aligned_cols=61 Identities=18% Similarity=0.103 Sum_probs=50.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
+|+..+..+++.++++++++++|||+.+|+.+++. +|+ +|.||.... +++.. +++++.+..
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----ag~---~v~~~n~~~-~~~~~---a~~v~~~~~ 250 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEE----AGL---RVAMENAIE-KVKEA---SDIVTLTNN 250 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTT----CSE---EEECTTSCH-HHHHH---CSEECCCTT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHH----cCC---EEEecCCCH-HHHhh---CCEEEccCC
Confidence 89999999999999999999999999999999998 664 678897654 45543 568877643
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-10 Score=100.75 Aligned_cols=62 Identities=16% Similarity=0.025 Sum_probs=50.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+|...+..+++.+|++++++++|||+.+|+.+++. ||+ .++|.|+ . ++++.. +++++.+..+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~-~va~~~~--~-~~~~~~---a~~v~~~~~~ 277 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEA----AGK-GVAMGNA--R-EDIKSI---ADAVTLTNDE 277 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHH----SSE-EEECTTC--C-HHHHHH---CSEECCCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCc-EEEEcCC--C-HHHHhh---CceeecCCCc
Confidence 89999999999999999999999999999999998 787 5667554 3 345543 5688777544
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.9e-11 Score=100.18 Aligned_cols=96 Identities=7% Similarity=0.030 Sum_probs=73.2
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHH--HhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHH
Q 024375 144 VSDALKLASSRIYIVTSNQSRFVETLLR--ELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 221 (268)
Q Consensus 144 v~e~L~~~g~~l~IvTnK~~~~~~~~L~--~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~a 221 (268)
..+.|+++|++++|+||| ..++.+++ . +|+. .+.|. ++||+.+..++++++++|++++||||+.+|+.+
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~-lgi~----~~~g~--~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~ 114 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALK-LDCK----TEVSV--SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEEC 114 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTC-CCCC----EECSC--SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhC-CCcE----EEECC--CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHH
Confidence 456666899999999999 78889999 4 4553 23343 589999999999999999999999999999999
Q ss_pred hhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 222 VIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 222 a~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
+++ +|+++ ++ +-. .+++++. .++++.+
T Consensus 115 ~~~----ag~~~-a~--~na-~~~~k~~---Ad~v~~~ 141 (168)
T 3ewi_A 115 LKR----VGLSA-VP--ADA-CSGAQKA---VGYICKC 141 (168)
T ss_dssp HHH----SSEEE-EC--TTC-CHHHHTT---CSEECSS
T ss_pred HHH----CCCEE-Ee--CCh-hHHHHHh---CCEEeCC
Confidence 998 77664 34 322 3444443 3577665
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.3e-11 Score=107.61 Aligned_cols=70 Identities=17% Similarity=0.029 Sum_probs=51.8
Q ss_pred chHHHHHHHHHhcCCCCCCceEecCC-----C-CCcHHHHHHHHhcCCCCC--CcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 162 QSRFVETLLRELAGVTITPDRLYGLG-----T-GPKVNVLKQLQKKPEHQG--LRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~~i~g~~-----~-~pkp~~l~~~~~~l~~~~--~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
....+...++. .+ |..+.+.. . .+|+..+..+++++|+++ +++++|||+.+|+.+++. ||
T Consensus 147 ~~~~~~~~l~~-~~----~~~~~s~~~~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~----ag--- 214 (259)
T 3zx4_A 147 EVEAVLEALEA-VG----LEWTHGGRFYHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRA----VD--- 214 (259)
T ss_dssp THHHHHHHHHH-TT----CEEEECSSSEEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHT----SS---
T ss_pred HHHHHHHHHHH-CC----cEEEecCceEEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHh----CC---
Confidence 45556666664 44 44554432 1 478999999999999998 999999999999999998 66
Q ss_pred EEEecCCCCH
Q 024375 234 YLVDWGYNTP 243 (268)
Q Consensus 234 i~v~wGy~~~ 243 (268)
++|..|-...
T Consensus 215 ~~va~~na~~ 224 (259)
T 3zx4_A 215 LAVYVGRGDP 224 (259)
T ss_dssp EEEECSSSCC
T ss_pred CeEEeCChhh
Confidence 4555565443
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.12 E-value=4.8e-12 Score=106.03 Aligned_cols=95 Identities=7% Similarity=-0.057 Sum_probs=81.0
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
+.++||+.++|+ .+.++++|+||+++.+++.+++. +++..+|+.+++.+.. ...+.+.+.++.+|.++++|++|||
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~-ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdD 132 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDN 132 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECS
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHH-HCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeC
Confidence 578999999999 44599999999999999999996 9999999999986632 2225667788899999999999999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecC
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
+..++.++.+ +||++ ..|-
T Consensus 133 s~~~~~~~~~----ngi~i--~~~~ 151 (181)
T 2ght_A 133 SPASYVFHPD----NAVPV--ASWF 151 (181)
T ss_dssp CGGGGTTCTT----SBCCC--CCCS
T ss_pred CHHHhccCcC----CEeEe--cccc
Confidence 9999999887 78885 6664
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.11 E-value=7.1e-10 Score=95.41 Aligned_cols=61 Identities=7% Similarity=-0.162 Sum_probs=48.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
+|+..+..+++.++++++++++|||+.+|+.+++. +|+ +|..|.+.. ++++. +++++.+..
T Consensus 153 ~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~----ag~---~va~~n~~~-~~k~~---a~~v~~~~~ 213 (227)
T 1l6r_A 153 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL----PVR---KACPANATD-NIKAV---SDFVSDYSY 213 (227)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS----SSE---EEECTTSCH-HHHHH---CSEECSCCT
T ss_pred CHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHH----cCc---eEEecCchH-HHHHh---CCEEecCCC
Confidence 89999999999999999999999999999999998 665 344565554 45542 568877753
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.08 E-value=9.4e-11 Score=106.30 Aligned_cols=103 Identities=12% Similarity=0.147 Sum_probs=69.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC------------------------CCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT------------------------GPK 191 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~------------------------~pk 191 (268)
.++|++.++|+ + |++++|+|++...++...++. +++. +.+.+... ++.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 177 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASM-IGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSG 177 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH-TTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchh-hhhh---hhhcccccchhhhccccccceeEEecCHHHHhhhh
Confidence 67899999999 6 999999999998888888885 7652 33333210 011
Q ss_pred ---------------HHHHH------------HHHhcCCCCCCc----EEEEcCcHhhHHHhhccCccC----CCcEEEE
Q 024375 192 ---------------VNVLK------------QLQKKPEHQGLR----LHFVEDRLATLKNVIKEPELD----GWNLYLV 236 (268)
Q Consensus 192 ---------------p~~l~------------~~~~~l~~~~~~----~~~VGDs~~Di~aa~~~~~~a----gi~~i~v 236 (268)
|..+. .+++ ++++++ +++|||+.+|+.+++. | |+. |+|
T Consensus 178 ~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs~NDi~ml~~----A~~~~g~~-vam 250 (332)
T 1y8a_A 178 EELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDSISDYKMFEA----ARGLGGVA-IAF 250 (332)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECSGGGHHHHHH----HHHTTCEE-EEE
T ss_pred HHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCcHhHHHHHHH----HhhcCCeE-EEe
Confidence 12222 1122 567788 9999999999999998 6 764 445
Q ss_pred ecCCCCHHHHHhcCCCCCeeecCh
Q 024375 237 DWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 237 ~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
.+ .+++++ ..++++.+.
T Consensus 251 -na---~~~lk~---~Ad~v~~~~ 267 (332)
T 1y8a_A 251 -NG---NEYALK---HADVVIISP 267 (332)
T ss_dssp -SC---CHHHHT---TCSEEEECS
T ss_pred -cC---CHHHHh---hCcEEecCC
Confidence 43 344554 356888773
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=7.1e-12 Score=106.35 Aligned_cols=90 Identities=7% Similarity=-0.072 Sum_probs=78.8
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCC--CcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~--pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
+.++||+.++|+ .+.++++|+||+++.+++.+|+. +++..+|+.+++.+.. .| +++.+.++.+|.++++|++||
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~-ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~vivD 144 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADL-LDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIVD 144 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEEE
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEEE
Confidence 578999999999 44499999999999999999996 9999999999987632 33 667788899999999999999
Q ss_pred CcHhhHHHhhccCccCCCcE
Q 024375 214 DRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~ 233 (268)
|+..++.++.+ |||++
T Consensus 145 Ds~~~~~~~~~----ngi~i 160 (195)
T 2hhl_A 145 NSPASYIFHPE----NAVPV 160 (195)
T ss_dssp SCGGGGTTCGG----GEEEC
T ss_pred CCHHHhhhCcc----CccEE
Confidence 99999999988 77776
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.00 E-value=2.3e-10 Score=99.52 Aligned_cols=64 Identities=13% Similarity=-0.098 Sum_probs=50.8
Q ss_pred CCcHHHHHHHHhcCCC-CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 189 GPKVNVLKQLQKKPEH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~-~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
..|...+..+++.+++ +++++++|||+.||+.+.+. +|+ +|.+|.+..+++++. +++++.++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~----ag~---~va~gna~~~~~~~~---a~~v~~~~~~ 242 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV----VDK---VFIVGSLKHKKAQNV---SSIIDVLEVI 242 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT----SSE---EEEESSCCCTTEEEE---SSHHHHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHh----CCc---EEEeCCCCccccchh---ceEEeccccc
Confidence 3899999999999888 89999999999999999998 664 677787664555543 5677666543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.93 E-value=7.8e-10 Score=97.77 Aligned_cols=62 Identities=13% Similarity=0.005 Sum_probs=50.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
+|+..+..+++.+|++++++++|||+.+|+.+++. +|+ +|.+|.+.. +++.. +++++.+..+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~---~va~~n~~~-~~~~~---a~~v~~~~~~ 259 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEY----AGV---GVAVDNAIP-SVKEV---ANFVTKSNLE 259 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE---EEECTTSCH-HHHHH---CSEECCCTTT
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHH----CCc---EEEecCCcH-HHHhh---CCEEecCCCc
Confidence 89999999999999999999999999999999998 665 566676554 45543 5688877544
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.91 E-value=5.3e-09 Score=103.40 Aligned_cols=109 Identities=19% Similarity=0.210 Sum_probs=84.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
.++.|++.++|+ ++|++++++|+++...++.+.++ +|++.+|..+ ....|.+.++.+.++ ++++||||
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~~~~~~---~P~~K~~~v~~l~~~-----~~v~~vGD 526 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAEV---LPHQKSEEVKKLQAK-----EVVAFVGD 526 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSC---CTTCHHHHHHHHTTT-----CCEEEEEC
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEeC---CHHhHHHHHHHHhhC-----CeEEEEeC
Confidence 578999999999 79999999999999999999996 9986433222 223688888877654 78999999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeee--cChhHHhhh
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTK 266 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~--~~~~~~~~~ 266 (268)
+.||+.+.+. || +|+.+|-++.. +....|+++ .++.++...
T Consensus 527 g~ND~~al~~----A~---vgiamg~g~~~----a~~~AD~vl~~~~~~~i~~~ 569 (645)
T 3j08_A 527 GINDAPALAQ----AD---LGIAVGSGSDV----AVESGDIVLIRDDLRDVVAA 569 (645)
T ss_dssp SSSCHHHHHH----SS---EEEEECCCSCC----SSCCSSSEESSCCTTHHHHH
T ss_pred CHhHHHHHHh----CC---EEEEeCCCcHH----HHHhCCEEEecCCHHHHHHH
Confidence 9999999998 55 88999955432 233467888 556666544
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.85 E-value=2.1e-08 Score=89.73 Aligned_cols=61 Identities=11% Similarity=-0.008 Sum_probs=48.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec-Chh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL-QLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~-~~~ 261 (268)
+|+..+..+++.+|++++++++|||+.+|+.+++. +|+ +|.+|.+.. +++.. +++++. +..
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~---~va~~na~~-~~k~~---a~~v~~~~~~ 285 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSN----FKY---SFAVANATD-SAKSH---AKCVLPVSHR 285 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHS----CSE---EEECTTCCH-HHHHH---SSEECSSCTT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----cCC---eEEEcCCcH-HHHhh---CCEEEccCCC
Confidence 89999999999999999999999999999999998 675 455665554 45542 467776 543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.73 E-value=9.1e-08 Score=89.02 Aligned_cols=115 Identities=13% Similarity=0.149 Sum_probs=84.3
Q ss_pred hCCCHHHHHHHHHHHHHHhhhcccc------------------ccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHH
Q 024375 108 WSENREALIELSGKVRDEWMDTDFT------------------TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFV 166 (268)
Q Consensus 108 ~~~~~~~~~~~~~~~r~~~~~~~~~------------------~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~ 166 (268)
.|++.+++++.+..+.+.....-.. .+....++|||+.|+++ ++|++++|||.-...++
T Consensus 172 ~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v 251 (385)
T 4gxt_A 172 KNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIV 251 (385)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred cCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHH
Confidence 4899999999998888765532111 11122358999999999 89999999999999999
Q ss_pred HHHHHHhcCCCC--CCceEecCC-----C---------------C-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhh
Q 024375 167 ETLLRELAGVTI--TPDRLYGLG-----T---------------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 223 (268)
Q Consensus 167 ~~~L~~~~gl~~--~f~~i~g~~-----~---------------~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~ 223 (268)
+.+.++ +|+.. ..+.|+|.. . + .|++.|.+.++. ......++++|||.+|+.+-+
T Consensus 252 ~~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~ 329 (385)
T 4gxt_A 252 RAFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLK 329 (385)
T ss_dssp HHHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHH
T ss_pred HHHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHh
Confidence 999995 87642 235565521 0 1 377888887654 244456899999999999987
Q ss_pred c
Q 024375 224 K 224 (268)
Q Consensus 224 ~ 224 (268)
.
T Consensus 330 ~ 330 (385)
T 4gxt_A 330 E 330 (385)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.8e-08 Score=88.83 Aligned_cols=65 Identities=9% Similarity=-0.096 Sum_probs=41.2
Q ss_pred CcHHHHHHHHhcCC-CCCCc--EEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCC-eeecCh
Q 024375 190 PKVNVLKQLQKKPE-HQGLR--LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR-IQLLQL 260 (268)
Q Consensus 190 pkp~~l~~~~~~l~-~~~~~--~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~-~~~~~~ 260 (268)
+|+..+..+++.++ +++++ +++|||+.+|+.+.+. +|+ .|+|.++....++++.. +.++ +++.+.
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----ag~-~va~~n~~~~~~~~~~~-~~a~~~v~~~~ 257 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV----MDY-AVIVKGLNREGVHLHDE-DPARVWRTQRE 257 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHT----SSE-EEECCCCC---------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHh----CCc-eEEecCCCccchhhccc-cCCceeEccCC
Confidence 89999999999999 99999 9999999999999998 676 37777776544455432 1245 555543
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.68 E-value=2.1e-08 Score=89.27 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=69.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-----C-------------CCcHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T-------------GPKVNVLK 196 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-----~-------------~pkp~~l~ 196 (268)
.++-||+.++++ ++|+++.|+|+-....++.++++ +|+......|++.. . ..++.+..
T Consensus 140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 578899999999 79999999999999999999996 99875433343311 0 13444443
Q ss_pred HHHh--cCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCC
Q 024375 197 QLQK--KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 240 (268)
Q Consensus 197 ~~~~--~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy 240 (268)
+... .+.-..++++||||+.||+-+++.. .-.-+++..||
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l----~~advgiaiGf 260 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGV----ANVEHILKIGY 260 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTTC----SCCSEEEEEEE
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhCc----cccCeEEEEEe
Confidence 3222 2333456899999999999987742 12237788887
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-08 Score=93.54 Aligned_cols=58 Identities=21% Similarity=0.233 Sum_probs=49.1
Q ss_pred CCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 205 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 205 ~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++++++||||+. +||.+|++ +|+++|+|.||++..++ ......|++++.++.++...|
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~----aG~~ti~V~~G~~~~~~-~~~~~~pd~vi~~l~el~~~i 347 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQN----YGWNSCLVKTGVYNEGD-DLKECKPTLIVNDVFDAVTKT 347 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHH----HTCEEEECSSSSCCTTC-CCTTCCCSEECSSHHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHHHH----cCCEEEEEccCCCCccc-ccccCCCCEEECCHHHHHHHH
Confidence 568999999999 59999999 89999999999987654 223568999999999996543
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-07 Score=87.84 Aligned_cols=80 Identities=11% Similarity=0.113 Sum_probs=63.3
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCc-eEecCCCCCcHHHHHHHHhcC-CCCCCcEEE
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPD-RLYGLGTGPKVNVLKQLQKKP-EHQGLRLHF 211 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~-~i~g~~~~pkp~~l~~~~~~l-~~~~~~~~~ 211 (268)
.+.+-||+.++|+ .+++.|+|.|+....+++.+++. ++... ||. .+++.+..+. ...+-++.+ |.+++++++
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~-LDp~~~~f~~ri~sr~~~g~--~~~KdL~~L~~~dl~~vii 149 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS--LAQKSLRRLFPCDTSMVVV 149 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HCTTSCSSSSCEECTTTSSC--SSCCCGGGTCSSCCTTEEE
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHH-hccCCceeeeEEEEecCCCC--cceecHHHhcCCCCceEEE
Confidence 3678899999999 89999999999999999999996 99887 787 7876543211 122335555 889999999
Q ss_pred EcCcHhhH
Q 024375 212 VEDRLATL 219 (268)
Q Consensus 212 VGDs~~Di 219 (268)
|.|++.-.
T Consensus 150 iDd~~~~~ 157 (372)
T 3ef0_A 150 IDDRGDVW 157 (372)
T ss_dssp EESCSGGG
T ss_pred EeCCHHHc
Confidence 99998543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=2.5e-06 Score=77.65 Aligned_cols=112 Identities=11% Similarity=0.120 Sum_probs=76.8
Q ss_pred CCCHHHHHHHHHHHHHHhhhcccc---------ccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc--
Q 024375 109 SENREALIELSGKVRDEWMDTDFT---------TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA-- 174 (268)
Q Consensus 109 ~~~~~~~~~~~~~~r~~~~~~~~~---------~~~~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~-- 174 (268)
|++.+++++.++++.+.-...... +......+||++.++++ ++|++++|||..++.+++.+.+. .
T Consensus 104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~-~~~ 182 (327)
T 4as2_A 104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAAD-PRY 182 (327)
T ss_dssp TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC-GGG
T ss_pred CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh-ccc
Confidence 889999888888777653321000 01112368999999999 79999999999999999999873 3
Q ss_pred CCCCCCceEecCCC------------------------------------------C-CcHHHHHHHHhcCCCCCCcEEE
Q 024375 175 GVTITPDRLYGLGT------------------------------------------G-PKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 175 gl~~~f~~i~g~~~------------------------------------------~-pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
|....-+.|+|... + -|+..|...++. | ...++.
T Consensus 183 ~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-g--~~Pi~a 259 (327)
T 4as2_A 183 GYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR-W--KRPILV 259 (327)
T ss_dssp SCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS-S--CCCSEE
T ss_pred ccCCCHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhh-C--CCCeEE
Confidence 22334477777420 1 267777776643 2 234699
Q ss_pred EcCc-HhhHHHhhc
Q 024375 212 VEDR-LATLKNVIK 224 (268)
Q Consensus 212 VGDs-~~Di~aa~~ 224 (268)
+||| ..|..+=..
T Consensus 260 ~Gns~dgD~~ML~~ 273 (327)
T 4as2_A 260 AGDTPDSDGYMLFN 273 (327)
T ss_dssp EESCHHHHHHHHHH
T ss_pred ecCCCCCCHHHHhc
Confidence 9999 589877643
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=5.6e-07 Score=86.59 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=75.1
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcC-------------CCCCCceEecCCCCCcHHH----------
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------------VTITPDRLYGLGTGPKVNV---------- 194 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~g-------------l~~~f~~i~g~~~~pkp~~---------- 194 (268)
=|.+..+|+ +.| ++.++||.+..+++.+++..+| |..|||.||....||..-.
T Consensus 248 dp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd~ 326 (555)
T 2jc9_A 248 DGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDT 326 (555)
T ss_dssp CTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEET
T ss_pred ChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEeec
Confidence 478888888 789 9999999999999999996337 4578999776443433211
Q ss_pred ------------------------HHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEec
Q 024375 195 ------------------------LKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 195 ------------------------l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~w 238 (268)
+..+++.+|..+++++||||.. .||..++.. +|+++++|--
T Consensus 327 ~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~---~GWrTiLViP 392 (555)
T 2jc9_A 327 KTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKR---QGWRTFLVIP 392 (555)
T ss_dssp TTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHH---HCCEEEEECT
T ss_pred CCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhh---cCeEEEEEEe
Confidence 4778888899999999999997 689999731 8999999954
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.8e-06 Score=83.25 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=83.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC-CCCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~-~~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
.++.|++.++++ ++|+++.++|+.+...++.+.++ +|++ .++..- ...|.+.++.+.++ ++++|||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~----~~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 603 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-----EVVAFVG 603 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCc----EEEccCCHHHHHHHHHHHhcC-----CeEEEEE
Confidence 478899999999 79999999999999999999996 9986 344332 23688888877654 7899999
Q ss_pred CcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeee--cChhHHhhh
Q 024375 214 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTK 266 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~--~~~~~~~~~ 266 (268)
|+.||+.+-+. || +|+..|-++.. +....|+++ .++..+...
T Consensus 604 Dg~ND~~al~~----A~---vgiamg~g~~~----a~~~AD~vl~~~~~~~i~~~ 647 (723)
T 3j09_A 604 DGINDAPALAQ----AD---LGIAVGSGSDV----AVESGDIVLIRDDLRDVVAA 647 (723)
T ss_dssp CSSTTHHHHHH----SS---EEEECCCCSCC----SSCCSSEECSSCCTTHHHHH
T ss_pred CChhhHHHHhh----CC---EEEEeCCCcHH----HHHhCCEEEeCCCHHHHHHH
Confidence 99999999998 55 88888854432 233457888 556665443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00012 Score=75.60 Aligned_cols=113 Identities=15% Similarity=0.154 Sum_probs=79.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCc----e-----------------------EecCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R-----------------------LYGLG 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~----~-----------------------i~g~~ 187 (268)
.++.||+.++++ ++|+++.++|+.....+..+.++ .|+....+ . +++.-
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 467899999999 89999999999999999999996 99975432 1 22211
Q ss_pred -CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHh
Q 024375 188 -TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFC 264 (268)
Q Consensus 188 -~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~ 264 (268)
...|..+++.+.++ .+.++||||+.||+.+-++ |+ +|+.-|-++ +..+++ .|+++.+ ...+.
T Consensus 681 ~P~~K~~~v~~l~~~----g~~v~~~GDG~ND~~alk~----Ad---vgiamg~g~-~~ak~a---Ad~vl~~~~~~~i~ 745 (995)
T 3ar4_A 681 EPSHKSKIVEYLQSY----DEITAMTGDGVNDAPALKK----AE---IGIAMGSGT-AVAKTA---SEMVLADDNFSTIV 745 (995)
T ss_dssp CSSHHHHHHHHHHTT----TCCEEEEECSGGGHHHHHH----ST---EEEEETTSC-HHHHHT---CSEEETTCCHHHHH
T ss_pred CHHHHHHHHHHHHHC----CCEEEEEcCCchhHHHHHH----CC---eEEEeCCCC-HHHHHh---CCEEECCCCHHHHH
Confidence 12456666666544 3679999999999999998 55 455557333 333332 4688844 66665
Q ss_pred hh
Q 024375 265 TK 266 (268)
Q Consensus 265 ~~ 266 (268)
..
T Consensus 746 ~~ 747 (995)
T 3ar4_A 746 AA 747 (995)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.8e-05 Score=77.86 Aligned_cols=107 Identities=16% Similarity=0.230 Sum_probs=78.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC-CCcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~-~pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
.++-|++.+.|+ ++|+++.++|+.+...++.+.++ +|++.+ +..-. ..|.+.++.+.++ .+.++|||
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~v----~a~~~P~~K~~~v~~l~~~----g~~V~~vG 623 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKKV----VAEIMPEDKSRIVSELKDK----GLIVAMAG 623 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCCE----ECSCCHHHHHHHHHHHHHH----SCCEEEEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCEE----EEecCHHHHHHHHHHHHhc----CCEEEEEE
Confidence 367799999999 78999999999999999999996 998653 32221 1455666665543 46799999
Q ss_pred CcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeec--ChhHHh
Q 024375 214 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFC 264 (268)
Q Consensus 214 Ds~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~--~~~~~~ 264 (268)
|+.||+.+-+. |+ +|+..|-++....+. -|+++. ++..+.
T Consensus 624 DG~ND~paL~~----Ad---vGIAmg~g~d~a~~~----AD~vl~~~~~~~i~ 665 (736)
T 3rfu_A 624 DGVNDAPALAK----AD---IGIAMGTGTDVAIES----AGVTLLHGDLRGIA 665 (736)
T ss_dssp CSSTTHHHHHH----SS---EEEEESSSCSHHHHH----CSEEECSCCSTTHH
T ss_pred CChHhHHHHHh----CC---EEEEeCCccHHHHHh----CCEEEccCCHHHHH
Confidence 99999999998 55 778888665443333 357774 344443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=97.77 E-value=5.1e-05 Score=66.21 Aligned_cols=66 Identities=17% Similarity=0.308 Sum_probs=43.9
Q ss_pred hCCCcEEEEcC---CchHHHHHHHHHhcCCC-CCCceEecCCCCCcHHHHHHHHhcCCCCCCcEE-EEcCcHhhHHHhhc
Q 024375 150 LASSRIYIVTS---NQSRFVETLLRELAGVT-ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH-FVEDRLATLKNVIK 224 (268)
Q Consensus 150 ~~g~~l~IvTn---K~~~~~~~~L~~~~gl~-~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~-~VGDs~~Di~aa~~ 224 (268)
++|++++++|| ++...+...++. +|+. ..++.|+++. ......+++ +.+. ++. .+|.. ......++
T Consensus 44 ~~g~~~~~~Tn~~~r~~~~~~~~l~~-lg~~~~~~~~ii~~~-----~~~~~~l~~-~~~~-~v~~~lg~~-~l~~~l~~ 114 (284)
T 2hx1_A 44 AQGQDYYIVTNDASRSPEQLADSYHK-LGLFSITADKIISSG-----MITKEYIDL-KVDG-GIVAYLGTA-NSANYLVS 114 (284)
T ss_dssp HTTCEEEEEECCCSSCHHHHHHHHHH-TTCTTCCGGGEEEHH-----HHHHHHHHH-HCCS-EEEEEESCH-HHHHTTCB
T ss_pred HCCCEEEEEeCCCCcCHHHHHHHHHH-CCcCCCCHhhEEcHH-----HHHHHHHHh-hcCC-cEEEEecCH-HHHHHHHH
Confidence 58999999998 778888888996 9998 7777777632 223333322 1222 666 78876 44555554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00012 Score=62.81 Aligned_cols=65 Identities=12% Similarity=-0.064 Sum_probs=50.2
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc----CCCCCeeecChhH
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLSD 262 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~----~~~P~~~~~~~~~ 262 (268)
+|+..+..+++.+|++++++++|||+.+|+.+.+. +|+ +|.+|.+.. ++++. ...+++++.+..+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~----~g~---~va~~na~~-~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET----SAR---GVIVRNAQP-ELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS----SSE---EEECTTCCH-HHHHHHHHHCCTTEEECSSCHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhc----cCc---EEEEcCCcH-HHHHHHhcccccceeecCCcch
Confidence 89999999999999999999999999999999997 664 566676544 56553 1134577766543
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00016 Score=57.95 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=25.7
Q ss_pred ccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhcCCC
Q 024375 142 PGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVT 177 (268)
Q Consensus 142 pGv~e~L~---~~g~~l~IvTnK~---~~~~~~~L~~~~gl~ 177 (268)
|++.++|+ ++|++++|+|+.+ ...+...++. +|+.
T Consensus 27 ~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~-~gi~ 67 (142)
T 2obb_A 27 PFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE 67 (142)
T ss_dssp TTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH-cCCC
Confidence 56666666 6899999999997 4455566664 6774
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.47 E-value=1.7e-05 Score=67.36 Aligned_cols=91 Identities=11% Similarity=-0.023 Sum_probs=70.2
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCC-CCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~-~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
..-||+.++|+ .+++.++|.|+..+.+++.+++. ++.. .+|+.++..+.. ..+....+.++.+|.++++||+|.|
T Consensus 59 ~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~-LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDD 137 (204)
T 3qle_A 59 AKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEK-LDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDT 137 (204)
T ss_dssp EECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-TSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEES
T ss_pred EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEEC
Confidence 45699999999 89999999999999999999996 9887 488876654421 1122244557778999999999999
Q ss_pred cHhhHHHhhccCccCCCcEE
Q 024375 215 RLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i 234 (268)
+..-+..... +||++.
T Consensus 138 sp~~~~~~p~----N~I~I~ 153 (204)
T 3qle_A 138 DPNSYKLQPE----NAIPME 153 (204)
T ss_dssp CTTTTTTCGG----GEEECC
T ss_pred CHHHHhhCcc----CceEee
Confidence 9998865554 455553
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00029 Score=66.77 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=73.2
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc--------CCCCCCceEecCCCCCc------------------
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTGPK------------------ 191 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~--------gl~~~f~~i~g~~~~pk------------------ 191 (268)
=|.+...|+ +.|.++.++||.+-.+++.++...+ .|..+||.||....||.
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 267 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 267 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCE
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCcc
Confidence 377888887 7999999999999999999998544 46679999997543221
Q ss_pred --------H-----HHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEec
Q 024375 192 --------V-----NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 192 --------p-----~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~w 238 (268)
+ --+..+.+.+|....+++||||.. .||..++.. .|.+|++|--
T Consensus 268 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~---~gWrT~~Ii~ 325 (470)
T 4g63_A 268 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKD---CNWRTALVVE 325 (470)
T ss_dssp EECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHS---CCCEEEEECT
T ss_pred cccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhc---cCCeEEEEhH
Confidence 0 013445556678878999999997 699988874 8999999943
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00077 Score=61.66 Aligned_cols=81 Identities=20% Similarity=0.145 Sum_probs=50.2
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCc----hHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQ----SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~----~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
++||+.+.|+ ++|+++.++||.+ +..++++-+. +|+....+.|+++..- ....++ ....++.|
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~-lgi~~~~~~i~ts~~~-----~~~~~~----~~~~v~vi 99 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSK-LDVDVSPLQIIQSHTP-----YKSLVN----KYSRILAV 99 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHH-HTSCCCGGGEECTTGG-----GGGGTT----TCSEEEEE
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHh-cCCCCChhhEeehHHH-----HHHHHh----cCCEEEEE
Confidence 3466666665 6899999999975 4455555555 8998777888875420 111111 22457777
Q ss_pred cCcHhhHHHhhccCccCCCcEEE
Q 024375 213 EDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~ 235 (268)
|-. .-.+..++ +|+..+.
T Consensus 100 G~~-~l~~~l~~----~G~~~v~ 117 (352)
T 3kc2_A 100 GTP-SVRGVAEG----YGFQDVV 117 (352)
T ss_dssp SST-THHHHHHH----HTCSEEE
T ss_pred CCH-HHHHHHHh----CCCeEec
Confidence 754 44455555 6777765
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0046 Score=64.06 Aligned_cols=111 Identities=14% Similarity=0.199 Sum_probs=75.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC------------------------c---------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------D--------- 181 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f------------------------~--------- 181 (268)
.++-|++.++++ ++|+++.++|+.....+..+.++ .|+...- .
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence 357799999999 79999999999999999999996 9986320 1
Q ss_pred ----------------eEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCC-CCH
Q 024375 182 ----------------RLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY-NTP 243 (268)
Q Consensus 182 ----------------~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy-~~~ 243 (268)
.+++.-.. .|-.++..+.+ .| +.++||||+.||+.+=+. |+ +||.-|- ++.
T Consensus 677 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g---~~V~~iGDG~ND~paLk~----Ad---vGIAmg~~gtd 745 (1028)
T 2zxe_A 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQR-QG---AIVAVTGDGVNDSPALKK----AD---IGVAMGISGSD 745 (1028)
T ss_dssp TCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHH-TT---CCEEEEECSGGGHHHHHH----SS---EEEEESSSCCH
T ss_pred hCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHh-CC---CEEEEEcCCcchHHHHHh----CC---ceEEeCCccCH
Confidence 12221111 34445555443 33 568999999999999998 55 6666674 544
Q ss_pred HHHHhcCCCCCeeecC--hhHHh
Q 024375 244 KERAEAASMPRIQLLQ--LSDFC 264 (268)
Q Consensus 244 ~el~~~~~~P~~~~~~--~~~~~ 264 (268)
. .+++ .|+++.+ .+.+.
T Consensus 746 ~-ak~a---AD~Vl~~~~~~~I~ 764 (1028)
T 2zxe_A 746 V-SKQA---ADMILLDDNFASIV 764 (1028)
T ss_dssp H-HHHH---CSEEETTCCTHHHH
T ss_pred H-HHHh---cCEEecCCCHHHHH
Confidence 3 3332 3577754 44443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0053 Score=62.83 Aligned_cols=105 Identities=13% Similarity=0.091 Sum_probs=74.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC---c----------------------eEecCC-CC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---D----------------------RLYGLG-TG 189 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f---~----------------------~i~g~~-~~ 189 (268)
+|-|++.++++ ++|+++.++|+-....+..+-++ .|+.... + .|++.- ..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 67799999998 79999999999999999999996 9996311 0 122211 12
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
.|..++..+.++ | +.+.|+||+.||.-+=++ |+ +|+.-|-++. ..+++ -|+++.+
T Consensus 614 ~K~~iV~~Lq~~-g---~~Vam~GDGvNDapaLk~----Ad---vGIAmg~gtd-~ak~a---ADiVl~~ 668 (920)
T 1mhs_A 614 HKYNVVEILQQR-G---YLVAMTGDGVNDAPSLKK----AD---TGIAVEGSSD-AARSA---ADIVFLA 668 (920)
T ss_dssp HHHHHHHHHHTT-T---CCCEECCCCGGGHHHHHH----SS---EEEEETTSCH-HHHHS---SSEEESS
T ss_pred HHHHHHHHHHhC-C---CeEEEEcCCcccHHHHHh----CC---cCcccccccH-HHHHh---cCeEEcC
Confidence 466777776554 3 578999999999999988 44 6666674443 33332 3577643
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0011 Score=57.26 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=27.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCc----HhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDR----LATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs----~~Di~aa~~ 224 (268)
.|...+..+++ ++++++.|||+ .||+.+-+.
T Consensus 187 ~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~ 221 (246)
T 3f9r_A 187 DKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTD 221 (246)
T ss_dssp SGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTC
T ss_pred CHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhC
Confidence 78888888877 88999999996 999999886
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.016 Score=59.95 Aligned_cols=107 Identities=16% Similarity=0.192 Sum_probs=70.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC------------------------ceEe-cCC--
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------------------------DRLY-GLG-- 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f------------------------~~i~-g~~-- 187 (268)
.++-|++.++++ ++|+++.++|+.+...+..+.++ .|+...- ..++ |.+
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 367899999998 79999999999999999999996 9984210 0111 111
Q ss_pred ----------------------CC-CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 188 ----------------------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 188 ----------------------~~-pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
.. .|.+++.. +++.| +.++|+||+.||+.+=+. || +||.-|-+..+
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~-lq~~g---~~V~a~GDG~ND~~mLk~----A~---vGIAMg~ng~d 750 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVES-CQRLG---AIVAVTGDGVNDSPALKK----AD---IGVAMGIAGSD 750 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHH-HHHcC---CEEEEECCcHHhHHHHHH----CC---eeEEeCCccCH
Confidence 00 12233333 33333 458999999999999998 55 67777743334
Q ss_pred HHHhcCCCCCeeecC
Q 024375 245 ERAEAASMPRIQLLQ 259 (268)
Q Consensus 245 el~~~~~~P~~~~~~ 259 (268)
..+++ -|+++.+
T Consensus 751 ~aK~a---AD~Vl~~ 762 (1034)
T 3ixz_A 751 AAKNA---ADMILLD 762 (1034)
T ss_pred HHHHh---cCEEecc
Confidence 44443 2466654
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0014 Score=50.76 Aligned_cols=16 Identities=19% Similarity=0.414 Sum_probs=14.2
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
|+|+||+||||+|+-.
T Consensus 2 k~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANT 17 (126)
T ss_dssp CEEEECSTTTTBCCCC
T ss_pred CEEEEecCCCCCCCCC
Confidence 7899999999998754
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0029 Score=53.94 Aligned_cols=32 Identities=13% Similarity=0.051 Sum_probs=26.9
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcC----cHhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGD----s~~Di~aa~~ 224 (268)
.|...+..+ +|+++++++.||| +.||+.+-+.
T Consensus 188 ~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~ 223 (246)
T 2amy_A 188 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTD 223 (246)
T ss_dssp SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHC
T ss_pred chHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHh
Confidence 677777777 8999999999999 9999999986
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.0037 Score=53.98 Aligned_cols=49 Identities=12% Similarity=-0.049 Sum_probs=37.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcC----cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGD----s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
.|...+..+ +|+++++++.||| +.||+.+-+. +|...++| |- ..+++++
T Consensus 197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~----~~~~g~av--~N-A~~~~k~ 249 (262)
T 2fue_A 197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFAD----PRTVGHSV--VS-PQDTVQR 249 (262)
T ss_dssp STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHS----TTSEEEEC--SS-HHHHHHH
T ss_pred CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhc----CccCcEEe--cC-CCHHHHH
Confidence 788888888 8999999999999 9999999997 56545555 42 3344543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.01 Score=60.55 Aligned_cols=106 Identities=13% Similarity=0.153 Sum_probs=71.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCC---CceE-----------------------ecCCC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT---PDRL-----------------------YGLGT 188 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~---f~~i-----------------------~g~~~ 188 (268)
-+|-|++.++++ ++|+++.++|+-....+..+-++ .|+..- -..+ ++.-.
T Consensus 487 Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~ 565 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVF 565 (885)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCC
T ss_pred cccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEEC
Confidence 367799999999 79999999999999999999996 998531 0111 11111
Q ss_pred -CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 189 -GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 189 -~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
..|.++++.+.++ | +.+.|+||+.||.-+=++ |+ +|+.-| +..+..+++ .|+++.+
T Consensus 566 P~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaLk~----Ad---vGIAmg-~gtd~ak~a---ADivl~~ 622 (885)
T 3b8c_A 566 PEHKYEIVKKLQER-K---HIVGMTGDGVNDAPALKK----AD---IGIAVA-DATDAARGA---SDIVLTE 622 (885)
T ss_dssp HHHHHHHHHHHHHT-T---CCCCBCCCSSTTHHHHHH----SS---SCCCCS-SSHHHHGGG---CSSCCSS
T ss_pred HHHHHHHHHHHHHC-C---CeEEEEcCCchhHHHHHh----CC---EeEEeC-CccHHHHHh---cceeecc
Confidence 1355667666653 3 568999999999999888 44 344445 233333332 3566654
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=94.88 E-value=0.017 Score=49.22 Aligned_cols=28 Identities=14% Similarity=-0.014 Sum_probs=20.1
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
.+|+||+||||+++-..+ .....+++++
T Consensus 4 ~li~~DlDGTLl~~~~~~-~~~~~~l~~~ 31 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQAL-EHLQEYLGDR 31 (244)
T ss_dssp EEEEECTBTTTBSCHHHH-HHHHHHHHTT
T ss_pred eEEEEeCCCCCcCCHHHH-HHHHHHHHHh
Confidence 489999999999987543 4455555543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=94.60 E-value=0.012 Score=48.02 Aligned_cols=16 Identities=44% Similarity=0.630 Sum_probs=14.1
Q ss_pred CcEEEEecCcccccCh
Q 024375 2 EDLYALDFDGVICDSC 17 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (268)
.++|+||+||||+|+.
T Consensus 26 ik~vifD~DGTL~~~~ 41 (188)
T 2r8e_A 26 IRLLILDVDGVLSDGL 41 (188)
T ss_dssp CSEEEECCCCCCBCSE
T ss_pred CCEEEEeCCCCcCCCC
Confidence 4799999999999964
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=94.31 E-value=0.035 Score=41.71 Aligned_cols=29 Identities=17% Similarity=0.000 Sum_probs=20.6
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAGVTITP 180 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f 180 (268)
+.|++ +|..+......+.+.+ ++|+..+|
T Consensus 109 ~~G~~-~i~~~~~~~~~~~l~~-~~~~~~~f 137 (137)
T 2pr7_A 109 EAGLV-GVYYQQFDRAVVEIVG-LFGLEGEF 137 (137)
T ss_dssp HHTCE-EEECSCHHHHHHHHHH-HHTCCSCC
T ss_pred HCCCE-EEEeCChHHHHHHHHH-HhCCccCC
Confidence 67884 6666667777777777 48888775
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=93.84 E-value=0.019 Score=48.84 Aligned_cols=30 Identities=7% Similarity=0.024 Sum_probs=28.3
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.|...+..+++.+| +++|||+.||+.+=+.
T Consensus 160 ~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~ 189 (239)
T 1u02_A 160 NKGSAIRSVRGERP-----AIIAGDDATDEAAFEA 189 (239)
T ss_dssp CHHHHHHHHHTTSC-----EEEEESSHHHHHHHHT
T ss_pred CHHHHHHHHHhhCC-----eEEEeCCCccHHHHHH
Confidence 79999999999998 8999999999999987
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.23 E-value=0.031 Score=45.96 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=14.0
Q ss_pred CcEEEEecCcccccCh
Q 024375 2 EDLYALDFDGVICDSC 17 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~ 17 (268)
.++|+||+||||+|+.
T Consensus 19 ik~vifD~DGtL~~~~ 34 (191)
T 3n1u_A 19 IKCLICDVDGVLSDGL 34 (191)
T ss_dssp CSEEEECSTTTTBCSC
T ss_pred CCEEEEeCCCCCCCCc
Confidence 3799999999999974
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=93.15 E-value=0.037 Score=44.90 Aligned_cols=15 Identities=20% Similarity=0.441 Sum_probs=13.7
Q ss_pred CcEEEEecCcccccC
Q 024375 2 EDLYALDFDGVICDS 16 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS 16 (268)
.|+|+||+||||.|+
T Consensus 9 ikliv~D~DGtL~d~ 23 (168)
T 3ewi_A 9 IKLLVCNIDGCLTNG 23 (168)
T ss_dssp CCEEEEECCCCCSCS
T ss_pred CcEEEEeCccceECC
Confidence 489999999999996
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.08 E-value=0.096 Score=49.18 Aligned_cols=78 Identities=10% Similarity=0.107 Sum_probs=58.6
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCC-CCce-EecCCCCCcHHHHHHHHhcC-CCCCCcEEEE
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDR-LYGLGTGPKVNVLKQLQKKP-EHQGLRLHFV 212 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~-~f~~-i~g~~~~pkp~~l~~~~~~l-~~~~~~~~~V 212 (268)
+.+-||+.++|+ .+.+.|+|.|+..+.+|..+++. ++... ||.. +++.+.... ...+=|.++ |.+.+.+|+|
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~-LDp~~~~f~~Rl~sRd~cg~--~~~KdL~~ll~rdl~~vvII 158 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS--LAQKSLRRLFPCDTSMVVVI 158 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-HCTTSTTTTTCEECTTTSSC--SSCCCGGGTCSSCCTTEEEE
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hccCCccccceEEEecCCCC--ceeeehHHhcCCCcceEEEE
Confidence 567799999999 89999999999999999999996 88876 6764 775442110 011113433 7788999999
Q ss_pred cCcHhh
Q 024375 213 EDRLAT 218 (268)
Q Consensus 213 GDs~~D 218 (268)
.|++.=
T Consensus 159 Dd~p~~ 164 (442)
T 3ef1_A 159 DDRGDV 164 (442)
T ss_dssp ESCSGG
T ss_pred ECCHHH
Confidence 999753
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=91.26 E-value=0.028 Score=50.67 Aligned_cols=89 Identities=17% Similarity=0.168 Sum_probs=60.2
Q ss_pred CCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC--c--eEecCCC---------CC-cHHHHHHHHhcC-
Q 024375 140 LYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITP--D--RLYGLGT---------GP-KVNVLKQLQKKP- 202 (268)
Q Consensus 140 lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f--~--~i~g~~~---------~p-kp~~l~~~~~~l- 202 (268)
.=||+.++|+ .+.+.++|.|+....++..+++. ++....+ . .+..... +. .-.-+..+..++
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~-Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL-LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHH-TTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 3499999999 88999999999999999999996 8876543 2 1222211 10 011122222212
Q ss_pred CCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
|.+++++|+|.|++.-...... +||++
T Consensus 244 ~rdl~~tIiIDdsp~~~~~~p~----NgI~I 270 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLMNPK----SGLKI 270 (320)
T ss_dssp TCCGGGEEEEESCGGGGTTSGG----GEEEC
T ss_pred CCChhHEEEEeCChHHhccCcC----ceEEe
Confidence 6788999999999998876655 45554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=88.79 E-value=0.31 Score=41.57 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=23.2
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
.++|+||+||||+++-..+......+++++
T Consensus 13 ~kli~~DlDGTLl~~~~~is~~~~~al~~l 42 (262)
T 2fue_A 13 RVLCLFDVDGTLTPARQKIDPEVAAFLQKL 42 (262)
T ss_dssp CEEEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred eEEEEEeCccCCCCCCCcCCHHHHHHHHHH
Confidence 479999999999998765555555666666
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=88.71 E-value=0.25 Score=40.83 Aligned_cols=16 Identities=31% Similarity=0.175 Sum_probs=14.1
Q ss_pred CCcEEEEecCcccccC
Q 024375 1 MEDLYALDFDGVICDS 16 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS 16 (268)
|.++++||+||||+++
T Consensus 30 ~~k~i~~D~DGtl~~~ 45 (218)
T 2o2x_A 30 HLPALFLDRDGTINVD 45 (218)
T ss_dssp SCCCEEECSBTTTBCC
T ss_pred cCCEEEEeCCCCcCCC
Confidence 3578999999999997
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.68 E-value=0.11 Score=43.06 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=13.8
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
++++||||||||+|.
T Consensus 29 ~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 29 KCVVIDLDETLVHSS 43 (195)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEEccccceEccc
Confidence 689999999999985
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=88.32 E-value=1.9 Score=37.32 Aligned_cols=79 Identities=13% Similarity=0.176 Sum_probs=59.0
Q ss_pred CCCcEEEEcCCch-HHHHHHHHHhcCCCCCC--ceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCc
Q 024375 151 ASSRIYIVTSNQS-RFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 151 ~g~~l~IvTnK~~-~~~~~~L~~~~gl~~~f--~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~ 227 (268)
.+.-=.+||+-.- +.+-++| .+|+..+| +-|+.+..-.|...++.+.++.| +.-.-+.|||+.---+||+.
T Consensus 175 ~~~vNVLVTs~qLVPaLaK~L--LygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~--- 248 (274)
T 3geb_A 175 PNCVNVLVTTTQLIPALAKVL--LYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKK--- 248 (274)
T ss_dssp TTEEEEEEESSCHHHHHHHHH--HTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHH---
T ss_pred CceeEEEEecCchHHHHHHHH--HhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHH---
Confidence 3444455665554 4444555 38998877 46777654579999999999996 55678999999999999998
Q ss_pred cCCCcEEEE
Q 024375 228 LDGWNLYLV 236 (268)
Q Consensus 228 ~agi~~i~v 236 (268)
.++|++=+
T Consensus 249 -~n~PFwrI 256 (274)
T 3geb_A 249 -HNMPFWRI 256 (274)
T ss_dssp -TTCCEEEC
T ss_pred -cCCCeEEe
Confidence 78999766
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=87.10 E-value=0.57 Score=39.40 Aligned_cols=13 Identities=38% Similarity=0.736 Sum_probs=12.4
Q ss_pred cEEEEecCccccc
Q 024375 3 DLYALDFDGVICD 15 (268)
Q Consensus 3 ~~vlFDlDGTLvD 15 (268)
++|+|||||||++
T Consensus 2 kli~~DlDGTLl~ 14 (239)
T 1u02_A 2 SLIFLDYDGTLVP 14 (239)
T ss_dssp CEEEEECBTTTBC
T ss_pred eEEEEecCCCCcC
Confidence 7899999999998
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=86.34 E-value=1.4 Score=37.23 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=49.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~---~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
.++|++.+.|+ ++|++++++||.+..... ..|+. +|+...++.++++. ......+++. ....++..|
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~-lg~~~~~~~i~~~~-----~~~~~~l~~~-~~~~~v~vi 89 (263)
T 1zjj_A 17 RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLK-MGIDVSSSIIITSG-----LATRLYMSKH-LDPGKIFVI 89 (263)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHT-TTCCCCGGGEEEHH-----HHHHHHHHHH-SCCCCEEEE
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEEecH-----HHHHHHHHHh-CCCCEEEEE
Confidence 45699999998 789999999998754433 34443 68765556666532 2233333332 223578888
Q ss_pred cCcHhhHHHhhc
Q 024375 213 EDRLATLKNVIK 224 (268)
Q Consensus 213 GDs~~Di~aa~~ 224 (268)
|.. ......++
T Consensus 90 G~~-~l~~~l~~ 100 (263)
T 1zjj_A 90 GGE-GLVKEMQA 100 (263)
T ss_dssp SCH-HHHHHHHH
T ss_pred cCH-HHHHHHHH
Confidence 885 44555555
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=85.57 E-value=2.1 Score=37.22 Aligned_cols=95 Identities=18% Similarity=0.248 Sum_probs=70.1
Q ss_pred CCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC--ceEecCCCC-CcHHHHHHHHhcCCCCCCc
Q 024375 138 NRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTG-PKVNVLKQLQKKPEHQGLR 208 (268)
Q Consensus 138 ~~lypGv~e~L~------~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f--~~i~g~~~~-pkp~~l~~~~~~l~~~~~~ 208 (268)
-.++|.+.++++ +.|+++..+++..-..++++.+ .|-.... ..-+|+..+ .+++.+..+.+..+++
T Consensus 115 ~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~--~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP--- 189 (265)
T 1wv2_A 115 KTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAE--IGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVP--- 189 (265)
T ss_dssp TTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHH--SCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC---
T ss_pred cccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--hCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC---
Confidence 357899999998 5799988677777777777766 6753210 011233323 6899999998877776
Q ss_pred EEEEc---CcHhhHHHhhccCccCCCcEEEEecCCCC
Q 024375 209 LHFVE---DRLATLKNVIKEPELDGWNLYLVDWGYNT 242 (268)
Q Consensus 209 ~~~VG---Ds~~Di~aa~~~~~~agi~~i~v~wGy~~ 242 (268)
|+++ -++.|+..|.+ .|+..|.|..+...
T Consensus 190 -VI~eGGI~TPsDAa~Ame----LGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 190 -VLVDAGVGTASDAAIAME----LGCEAVLMNTAIAH 221 (265)
T ss_dssp -BEEESCCCSHHHHHHHHH----HTCSEEEESHHHHT
T ss_pred -EEEeCCCCCHHHHHHHHH----cCCCEEEEChHHhC
Confidence 7777 68889999998 78999999988754
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=84.99 E-value=0.24 Score=40.37 Aligned_cols=15 Identities=13% Similarity=0.226 Sum_probs=13.7
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
+++++||||||++|.
T Consensus 16 ~~LVLDLD~TLvhs~ 30 (181)
T 2ght_A 16 ICVVINLDETLVHSS 30 (181)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEECCCCCeECCc
Confidence 689999999999985
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=84.85 E-value=0.34 Score=38.90 Aligned_cols=16 Identities=19% Similarity=0.264 Sum_probs=14.0
Q ss_pred cEEEEecCcccccChh
Q 024375 3 DLYALDFDGVICDSCE 18 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~ 18 (268)
++++||+||||+++..
T Consensus 15 k~~~~D~Dgtl~~~~~ 30 (176)
T 2fpr_A 15 KYLFIDRDGTLISEPP 30 (176)
T ss_dssp EEEEECSBTTTBCCC-
T ss_pred cEEEEeCCCCeEcCCC
Confidence 7999999999999865
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=80.87 E-value=0.33 Score=40.81 Aligned_cols=30 Identities=13% Similarity=0.133 Sum_probs=23.4
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
.++|+||+||||+++-..+......+++++
T Consensus 6 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l 35 (246)
T 2amy_A 6 PALCLFDVDGTLTAPRQKITKEMDDFLQKL 35 (246)
T ss_dssp SEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred ceEEEEECCCCcCCCCcccCHHHHHHHHHH
Confidence 389999999999998765656666666666
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 268 | |||
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.98 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.97 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.95 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.95 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.94 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.92 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.89 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.89 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.86 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.84 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.83 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.81 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.81 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.8 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.8 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.77 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.73 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.73 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.7 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.69 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.68 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.67 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.42 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.98 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.97 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.8 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.56 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.49 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.44 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.42 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.3 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.28 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.22 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.2 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.13 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.12 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.92 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.91 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.81 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.67 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.28 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.22 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.1 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.8 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 95.99 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.65 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.57 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.26 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 91.96 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 89.9 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 86.8 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 86.6 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 86.38 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 83.8 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 83.69 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 81.17 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 81.06 |
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=3e-35 Score=247.16 Aligned_cols=202 Identities=16% Similarity=0.214 Sum_probs=162.4
Q ss_pred cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccccc
Q 024375 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~~ 82 (268)
++|+||+||||+||.+.+..+++.++++++ ++.. ..+.++.++|.+....+. +.+.
T Consensus 5 k~VifD~DGTL~ds~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~~~~~~~~~~-~~~~---------- 60 (210)
T d2ah5a1 5 TAIFFDLDGTLVDSSIGIHNAFTYTFKELG------VPSP-------DAKTIRGFMGPPLESSFA-TCLS---------- 60 (210)
T ss_dssp CEEEECSBTTTEECHHHHHHHHHHHHHHHT------CCCC-------CHHHHHHTSSSCHHHHHH-TTSC----------
T ss_pred CEEEEeCCCccccCHHHHHHHHHHHHHHCC------CCCC-------CHHHHHHhhhcchhhhcc-cccc----------
Confidence 799999999999999999999999999993 3321 124678888887655431 1110
Q ss_pred ccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEcC
Q 024375 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvTn 160 (268)
.+........++..+.. .+.....+|||+.++|+ +.+++++|+||
T Consensus 61 -----------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~~~~~i~t~ 107 (210)
T d2ah5a1 61 -----------------------------KDQISEAVQIYRSYYKA----KGIYEAQLFPQIIDLLEELSSSYPLYITTT 107 (210)
T ss_dssp -----------------------------GGGHHHHHHHHHHHHHH----TGGGSCEECTTHHHHHHHHHTTSCEEEEEE
T ss_pred -----------------------------chhhHHHHHHHHHHHHh----hhhhcccchhHHHHHHhhhhcccchhhccc
Confidence 01111222333333332 23445789999999999 67789999999
Q ss_pred CchHHHHHHHHHhcCCCCCCceEecCCC--CCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEec
Q 024375 161 NQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 161 K~~~~~~~~L~~~~gl~~~f~~i~g~~~--~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~w 238 (268)
++...++.+|++ +|++.+|+.|++.+. +|||+++..++++++++|++++|||||.+|+.+|++ +|+++|+|.|
T Consensus 108 ~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~----aGi~~i~v~~ 182 (210)
T d2ah5a1 108 KDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARE----TGIQKLAITW 182 (210)
T ss_dssp EEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEEEEESS
T ss_pred ccchhhhHHHHh-hcccccccccccccccccccccccchhhhhhhcccccceeecCCHHHHHHHHH----cCCeEEEEcC
Confidence 999999999996 999999999997653 499999999999999999999999999999999999 8999999999
Q ss_pred CCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 239 GYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 239 Gy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
|++..+++.++ .|++++.+++||.+.|.
T Consensus 183 g~~~~~~l~~~--~pd~vi~~l~el~~~le 210 (210)
T d2ah5a1 183 GFGEQADLLNY--QPDYIAHKPLEVLAYFQ 210 (210)
T ss_dssp SSSCHHHHHTT--CCSEEESSTTHHHHHTC
T ss_pred CCCCHHHHHhC--CCCEEECCHHHHHHHhC
Confidence 99999888764 58999999999988774
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=1.6e-34 Score=243.03 Aligned_cols=199 Identities=14% Similarity=0.133 Sum_probs=152.4
Q ss_pred CC-cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~-~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
|. |+|+|||||||+||.+.+..+++.++++++ .+... ++.+..++...+..+ ..
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g------~~~~~--------~~~~~~~~~~~~~~~-----~~------ 55 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYG------KPFSP--------AQAQKTFPMAAEQAM-----TE------ 55 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTT------CCCCH--------HHHHHHTTSCHHHHH-----HH------
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcC------CCCCH--------HHHHHHhcchhhhhh-----hc------
Confidence 75 999999999999999999999999999984 33211 122333333322221 11
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYI 157 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~I 157 (268)
.+.+....++....+++.+.+. ...+++|||+.++|+ +++++++|
T Consensus 56 ----------------------------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~L~~l~~~~~~~i 102 (207)
T d2hdoa1 56 ----------------------------LGIAASEFDHFQAQYEDVMASH-----YDQIELYPGITSLFEQLPSELRLGI 102 (207)
T ss_dssp ----------------------------TTCCGGGHHHHHHHHHHHHTTC-----GGGCEECTTHHHHHHHSCTTSEEEE
T ss_pred ----------------------------cccchhhHHHHHHHhhhhhccc-----ccccccccchhhhhhhhcccccccc
Confidence 0111112222233344443332 345789999999999 67899999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||++...+..+|++ +|+..+|+.+++++ .||+|+++..+++++|++|++|+|||||.+|+.+|++ +|+++
T Consensus 103 vT~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~----aG~~~ 177 (207)
T d2hdoa1 103 VTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQA----ANVDF 177 (207)
T ss_dssp ECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred ccccccccccccccc-ccccccccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHH----cCCeE
Confidence 999999999999995 99999999999865 3599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
|+|.||+.+..+.. .+++.+++++||.+.
T Consensus 178 i~v~~g~~~~~~~~----~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 178 GLAVWGMDPNADHQ----KVAHRFQKPLDILEL 206 (207)
T ss_dssp EEEGGGCCTTGGGS----CCSEEESSGGGGGGG
T ss_pred EEEecCCCChhHhh----hcCcEeCCHHHHHhh
Confidence 99999998876554 468999999998653
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=4e-34 Score=241.18 Aligned_cols=214 Identities=19% Similarity=0.186 Sum_probs=160.3
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
+|+|+|||||||+||.+.+..+++.++++++ ++... .+.++.+++........ +.+...
T Consensus 4 ~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~------- 62 (224)
T d2hsza1 4 FKLIGFDLDGTLVNSLPDLALSINSALKDVN------LPQAS-------ENLVMTWIGNGADVLSQ-RAVDWA------- 62 (224)
T ss_dssp CSEEEECSBTTTEECHHHHHHHHHHHHHHTT------CCCCC-------HHHHHHHCSSCHHHHHH-HHHHHH-------
T ss_pred CCEEEEeCCCCcccCHHHHHHHHHHHHHHCC------CCCCc-------HHHHHHHhhhhhhhhhh-hhhhhh-------
Confidence 3899999999999999999999999999994 33221 23566666666544321 222100
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
...+ ...+...............+ .........+|||+.++|. ++|++++|+
T Consensus 63 ------------~~~~---------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~ 117 (224)
T d2hsza1 63 ------------CKQA---------EKELTEDEFKYFKRQFGFYY----GENLCNISRLYPNVKETLEALKAQGYILAVV 117 (224)
T ss_dssp ------------HHHH---------TCCCCHHHHHHHHHHHHHHH----HHHTTSSCEECTTHHHHHHHHHHTTCEEEEE
T ss_pred ------------hhhh---------hhhhhHHHHHHHHHHHHHHH----HHhhccccchHHHHHHHHHHHhccCCccccc
Confidence 0000 00112222111111111111 1223445689999999999 799999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||.+...++.+|++ +|+..+|+.+++++ .||+|+++..++++++++|++|+||||+.+|+.+|++ +|+++|
T Consensus 118 tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~----aG~~~i 192 (224)
T d2hsza1 118 TNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS----AGCAVV 192 (224)
T ss_dssp CSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEEE
T ss_pred ccccHHHHHHHHHh-cCchhhccccccccccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHH----cCCeEE
Confidence 99999999999996 99999999999875 2499999999999999999999999999999999999 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
+|.|||++..++.+. .|++++.++++|..++.
T Consensus 193 ~v~~g~~~~~~l~~~--~~d~~v~~l~dL~~iie 224 (224)
T d2hsza1 193 GLTYGYNYNIPIAQS--KPDWIFDDFADILKITQ 224 (224)
T ss_dssp EESSSCSTTCCGGGG--CCSEEESSGGGGGGGTC
T ss_pred EEeCCCCCcchhhhc--CCCEEECCHHHHHHhhC
Confidence 999999988777654 68899999999988763
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.98 E-value=9.4e-32 Score=228.94 Aligned_cols=206 Identities=12% Similarity=-0.007 Sum_probs=147.3
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVR-WPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~-~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.|+|+||+||||+||.+....+++.++.++ +.... . .-..+.+.-..... ...+
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~-~~~~--------- 56 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS---T------------GSHDFSGKMDGAII-YEVL--------- 56 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC---C---------------CCTTCCHHHHH-HHHH---------
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCcc---H------------HHHHHhcCchHHHH-HHHH---------
Confidence 479999999999999999999999988887 32211 0 00111121111111 1111
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHH----HHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCC-
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREAL----IELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS- 152 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g- 152 (268)
+..++..... ++..+.|...|.+... .....+|||+.++|+ ++|
T Consensus 57 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~L~~L~~~g~ 108 (228)
T d2hcfa1 57 -------------------------SNVGLERAEIADKFDKAKETYIALFRERAR---REDITLLEGVRELLDALSSRSD 108 (228)
T ss_dssp -------------------------HTTTCCHHHHHHHHHHHHHHHHHHHHHHCC---GGGEEECTTHHHHHHHHHTCTT
T ss_pred -------------------------HHhCCChHHHHHHHHHHHHHHHHHHHHHhh---ccCceecCchHHHHhhhhcccc
Confidence 1112222222 2223333333333221 123479999999999 566
Q ss_pred CcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCC----CCcHHHHHHHHhcC---CCCCCcEEEEcCcHhhHHHhhcc
Q 024375 153 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 153 ~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~----~pkp~~l~~~~~~l---~~~~~~~~~VGDs~~Di~aa~~~ 225 (268)
++++|+||+++..+...|++ +||..||+.+++++. +|+|++....+..+ +++|++|+||||+.+|+.+|++
T Consensus 109 ~~~~v~t~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~- 186 (228)
T d2hcfa1 109 VLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARE- 186 (228)
T ss_dssp EEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHT-
T ss_pred ccccccCCCcchhhhhhhhh-hcccccccccccccccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHH-
Confidence 89999999999999999996 999999999998762 37788766555544 7899999999999999999998
Q ss_pred CccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 226 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 226 ~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+++|+|.||+.+.+++..+ .|++++.++++|.+.|
T Consensus 187 ---aG~~~i~v~~g~~~~~~l~~~--~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 187 ---LDARSIAVATGNFTMEELARH--KPGTLFKNFAETDEVL 223 (228)
T ss_dssp ---TTCEEEEECCSSSCHHHHHTT--CCSEEESCSCCHHHHH
T ss_pred ---cCCEEEEEcCCCCCHHHHhhC--CCCEEECCHHHHHHHH
Confidence 899999999999999988765 6899999999998766
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=1.8e-32 Score=229.65 Aligned_cols=193 Identities=17% Similarity=0.173 Sum_probs=144.9
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccc-cchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVV-ETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~v-g~G~~~~~~~~~l~~~~~~~~~ 80 (268)
+++++|||||||+||.+.+..+++.++++++ ++... ++++.++ +.+....+ .+.+
T Consensus 1 ~~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g------~~~~~--------~~~~~~~~~~~~~~~~-~~~~--------- 56 (204)
T d2go7a1 1 KTAFIWDLDGTLLDSYEAILSGIEETFAQFS------IPYDK--------EKVREFIFKYSVQDLL-VRVA--------- 56 (204)
T ss_dssp CCEEEECTBTTTEECHHHHHHHHHHHHHHHT------CCCCH--------HHHHHHHHHSCHHHHH-HHHH---------
T ss_pred CEEEEEcCCCcCccCHHHHHHHHHHHHHHcC------CCCCH--------HHHHHhhccccccccc-cccc---------
Confidence 4689999999999999999999999999993 33211 2233333 33333222 1221
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
...+...+. +..+...+.. .+.....+||||.++|+ ++|++++|
T Consensus 57 -------------------------~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~pgv~~~L~~L~~~g~~~~v 103 (204)
T d2go7a1 57 -------------------------EDRNLDVEV----LNQVRAQSLA----EKNAQVVLMPGAREVLAWADESGIQQFI 103 (204)
T ss_dssp -------------------------HHHTCCHHH----HHHHHHHHHT----TCGGGCEECTTHHHHHHHHHHTTCEEEE
T ss_pred -------------------------chhhhhHHH----HHHHHHHHHH----hhcccCcccchHHhhhhcccccccchhh
Confidence 111222222 2222333322 23445789999999999 79999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||+++. +..+|++ +|+..||+.|+|++ .||+|+++..++++++++|++|+||||+.+|+++|++ +|+++
T Consensus 104 ~Sn~~~~-~~~~l~~-~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~----~G~~~ 177 (204)
T d2go7a1 104 YTHKGNN-AFTILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQN----SGIQS 177 (204)
T ss_dssp ECSSCTH-HHHHHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred hcccchh-hhhhhhh-cccccccccccccccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHH----cCCeE
Confidence 9999875 5678996 99999999999875 3599999999999999999999999999999999999 89999
Q ss_pred EEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 234 YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 234 i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
|+|.||.. .+++.+.++.++.+++
T Consensus 178 i~v~~~~~----------~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 178 INFLESTY----------EGNHRIQALADISRIF 201 (204)
T ss_dssp EESSCCSC----------TTEEECSSTTHHHHHT
T ss_pred EEEcCCCC----------CcCeecCCHHHHHHHh
Confidence 99999853 4678899999998775
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.97 E-value=1.7e-32 Score=237.61 Aligned_cols=218 Identities=13% Similarity=0.031 Sum_probs=155.2
Q ss_pred CcEEEEecCcccccChhHH-HHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 2 EDLYALDFDGVICDSCEET-ALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i-~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
.|+|+|||||||+|+-... ..+++.++++++ ++. +.++++.++|..-...+ +.+...
T Consensus 2 IkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g------~~~--------~~~~~~~~~g~~~~~~~--~~~~~~------ 59 (257)
T d1swva_ 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRG------VAI--------TAEEARKPMGLLKIDHV--RALTEM------ 59 (257)
T ss_dssp CCEEEECSBTTTBSTTCCTTHHHHHHHHHTTT------CCC--------CHHHHHTTTTSCHHHHH--HHHHHS------
T ss_pred cEEEEEcCCCCeEeCcchHHHHHHHHHHHHcC------CCC--------CHHHHHHHhCCcHHHHH--HHHhhh------
Confidence 3799999999999986543 667788888883 331 12456666664332222 222110
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhC--CCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l 155 (268)
..+.. .+.+.++ .+..+.......+.+.|... +.....+|||+.++|+ ++|+++
T Consensus 60 ----------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~Lk~~g~~i 118 (257)
T d1swva_ 60 ----------PRIAS-------EWNRVFRQLPTEADIQEMYEEFEEILFAI----LPRYASPINGVKEVIASLRERGIKI 118 (257)
T ss_dssp ----------HHHHH-------HHHHHHSSCCCHHHHHHHHHHHHHHHHHH----GGGGCCBCTTHHHHHHHHHHTTCEE
T ss_pred ----------hhhhH-------HHHHHhcccCCHHHHHHHHHHHHHHHHHH----hhccCccCCcHHHHHHHHHhcccce
Confidence 00001 1111111 13444455555555555443 2344689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhcCCCCCC-ceEecCC----CCCcHHHHHHHHhcCCCC-CCcEEEEcCcHhhHHHhhccCccC
Q 024375 156 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 156 ~IvTnK~~~~~~~~L~~~~gl~~~f-~~i~g~~----~~pkp~~l~~~~~~l~~~-~~~~~~VGDs~~Di~aa~~~~~~a 229 (268)
+|+||.++..++.+|++ +|+..+| +.+++++ .||+|+++..+++++++. +++|+||||+.+||.+|++ |
T Consensus 119 ~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~----a 193 (257)
T d1swva_ 119 GSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRN----A 193 (257)
T ss_dssp EEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHH----T
T ss_pred eecCCCchhhHHHHHHH-HhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHH----C
Confidence 99999999999999996 9999877 7877765 259999999999999996 5899999999999999999 8
Q ss_pred CCcEEEEecCCC----CHHHHHhc-----------------CCCCCeeecChhHHhhhc
Q 024375 230 GWNLYLVDWGYN----TPKERAEA-----------------ASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 230 gi~~i~v~wGy~----~~~el~~~-----------------~~~P~~~~~~~~~~~~~~ 267 (268)
|+.+|+|.||++ +.+++... .+.|+|+++++.||...|
T Consensus 194 G~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii 252 (257)
T d1swva_ 194 GMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM 252 (257)
T ss_dssp TSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHH
Confidence 999999999985 23332221 234899999999998876
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3e-31 Score=223.73 Aligned_cols=202 Identities=15% Similarity=0.098 Sum_probs=151.7
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
.+++||||||||+||.+....+.+.++++++ ++.. ..++++.+.|......+. ......
T Consensus 3 i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~------- 61 (218)
T d1te2a_ 3 ILAAIFDMDGLLIDSEPLWDRAELDVMASLG------VDIS-------RRNELPDTLGLRIDMVVD-LWYARQ------- 61 (218)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTT------CCGG-------GGGGSCCCTTCCHHHHHH-HHHHHS-------
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcC------CCCC-------HHHHHHHHhCCCccchhh-hhhhcc-------
Confidence 4799999999999999988899999999994 3311 124677888877655431 222110
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~Iv 158 (268)
... .....+..+.+.+.+.+. ......+|||+.++|+ ++|++++|+
T Consensus 62 -----~~~----------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~~~l~~L~~~g~~~~i~ 110 (218)
T d1te2a_ 62 -----PWN----------------------GPSRQEVVERVIARAISL----VEETRPLLPGVREAVALCKEQGLLVGLA 110 (218)
T ss_dssp -----CCS----------------------SSCHHHHHHHHHHHHHHH----HHHHCCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred -----ccc----------------------chhHHHHHHHHHHHHHHh----hhccccccchHHHHHHHhhhcccccccc
Confidence 000 000011111122222211 1223578999999999 799999999
Q ss_pred cCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 159 TnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
||.++..++.++++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+..|+.+|++ +|+++|
T Consensus 111 T~~~~~~~~~~l~~-~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~----~G~~~i 185 (218)
T d1te2a_ 111 SASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKA----ARMRSI 185 (218)
T ss_dssp ESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHH----TTCEEE
T ss_pred cccccccccccccc-ccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHH----cCCEEE
Confidence 99999999999996 99999999999976 2489999999999999999999999999999999999 899999
Q ss_pred EEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 235 LVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 235 ~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|.+++...+.. ...|++++.++.||
T Consensus 186 ~v~~~~~~~~~~---~~~a~~~i~~l~el 211 (218)
T d1te2a_ 186 VVPAPEAQNDPR---FVLANVKLSSLTEL 211 (218)
T ss_dssp ECCCTTTTTCGG---GGGSSEECSCGGGC
T ss_pred EECCCCCccchh---hcCCCEEECChhhC
Confidence 999988665432 23578999999988
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.96 E-value=3.5e-30 Score=217.72 Aligned_cols=205 Identities=14% Similarity=0.086 Sum_probs=148.9
Q ss_pred CcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccccc
Q 024375 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (268)
Q Consensus 2 ~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~~ 81 (268)
+|+|||||||||+||.+....+++.++++++ ++.. .+ +....+.|..+...+ .+.+...
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g------~~~~-~~------~~~~~~~g~~~~~~~-~~~~~~~------- 60 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAG------YPIS-VE------EMGERFAGMTWKNIL-LQVESEA------- 60 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTT------CCCC-HH------HHHHHHTTCCHHHHH-HHHHHHH-------
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcC------CCCC-HH------HHHHHHhhhcccccc-ccccccc-------
Confidence 5899999999999999999999999999993 3311 11 122334444443332 1222110
Q ss_pred cccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHHhCCCcEEEEcCC
Q 024375 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSN 161 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~~~g~~l~IvTnK 161 (268)
+.. .+.+. ++.+...|... +.....++||+.++|++.+.+.+|+||.
T Consensus 61 -----~~~--------------------~~~~~----~~~~~~~~~~~----~~~~~~~~~g~~~~L~~l~~~~~i~t~~ 107 (222)
T d2fdra1 61 -----SIP--------------------LSASL----LDKSEKLLDMR----LERDVKIIDGVKFALSRLTTPRCICSNS 107 (222)
T ss_dssp -----CCC--------------------CCTHH----HHHHHHHHHHH----HHHHCCBCTTHHHHHHHCCSCEEEEESS
T ss_pred -----ccc--------------------ccccc----hhHHHHHHHHH----hhhccchhhhHHHHhhhccccceeeeec
Confidence 110 01111 11222222221 1234689999999999777788999999
Q ss_pred chHHHHHHHHHhcCCCCCCceEec-CC------CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEE
Q 024375 162 QSRFVETLLRELAGVTITPDRLYG-LG------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 162 ~~~~~~~~L~~~~gl~~~f~~i~g-~~------~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i 234 (268)
....++..|++ +|+..+|+.++. .+ .||+|+++..++++++++|++|+||||+..|+.+|++ +|+++|
T Consensus 108 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~----aG~~~i 182 (222)
T d2fdra1 108 SSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA----AGMRVI 182 (222)
T ss_dssp CHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHH----TTCEEE
T ss_pred chhhhhhhhcc-cccccccceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHH----cCCEEE
Confidence 99999999996 999999986553 22 3588999999999999999999999999999999999 899999
Q ss_pred EEecCCCCH----HHHHhcCCCCCeeecChhHHhhhc
Q 024375 235 LVDWGYNTP----KERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 235 ~v~wGy~~~----~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
+|+||+.+. +++.. +.|++++.++++|.+.|
T Consensus 183 ~v~~~~~~~~~~~~~l~~--~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 183 GFTGASHTYPSHADRLTD--AGAETVISRMQDLPAVI 217 (222)
T ss_dssp EECCSTTCCTTHHHHHHH--HTCSEEESCGGGHHHHH
T ss_pred EEccCCCCCcchHHHHHh--CCCCEEECCHHHHHHHH
Confidence 999998653 33444 35889999999998765
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.96 E-value=3.4e-30 Score=217.67 Aligned_cols=185 Identities=17% Similarity=0.151 Sum_probs=136.7
Q ss_pred CCcEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhccccccc
Q 024375 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (268)
Q Consensus 1 m~~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~~ 80 (268)
|+|+|+||+||||+||.+.+..+++.++++++ ++... .+..+.+.|.+..... ...+ ...
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~~~~~~~~~-~~~~-~~~----- 60 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIG------INGVD-------RQFNEQLKGVSREDSL-QKIL-DLA----- 60 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTT------CCCCC-------HHHHTTTTTCCHHHHH-HHHH-TTS-----
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcC------CCCCh-------HHHHHHHhhccchhhh-hhcc-ccc-----
Confidence 99999999999999999999999999999983 33211 1233444555544432 1222 100
Q ss_pred ccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 024375 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~I 157 (268)
+. .++.+.+.+....+.+.|.+.... .....+|||+.++|+ ++|++++|
T Consensus 61 ------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~l~~~~~~i~i 112 (221)
T d1o08a_ 61 ------DK--------------------KVSAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSNKIKIAL 112 (221)
T ss_dssp ------SS--------------------CCCHHHHHHHHHHHHHHHHHHTTT--CCGGGBCTTHHHHHHHHHHTTCEEEE
T ss_pred ------cc--------------------cchhhhhhhHHHHHHhhccccccc--cccccccCCceeccccccccccceEE
Confidence 00 123333444444444444443221 223579999999999 79999999
Q ss_pred EcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE
Q 024375 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~ 233 (268)
+||... ....++. +|+..+|+.+++++ .||+|++++.+++++|++|++|+||||+.+|+++|++ +|+++
T Consensus 113 ~s~~~~--~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~----aG~~~ 185 (221)
T d1o08a_ 113 ASASKN--GPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD----SGALP 185 (221)
T ss_dssp CCSCTT--HHHHHHH-TTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHH----HTCEE
T ss_pred Eeecch--hhHHHHh-hccccccccccccccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHH----cCCEE
Confidence 999754 5788995 99999999999865 2499999999999999999999999999999999999 89999
Q ss_pred EEEecCC
Q 024375 234 YLVDWGY 240 (268)
Q Consensus 234 i~v~wGy 240 (268)
|+|.||+
T Consensus 186 i~v~~~~ 192 (221)
T d1o08a_ 186 IGVGRPE 192 (221)
T ss_dssp EEESCHH
T ss_pred EEECChh
Confidence 9998875
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=3.4e-28 Score=207.17 Aligned_cols=122 Identities=16% Similarity=0.177 Sum_probs=108.9
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
..+|||+.++|+ ++|++++|+||.+.......|++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~ 177 (230)
T d1x42a1 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177 (230)
T ss_dssp CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CcccccHHHHHHHhhccCceeeeeccccccchhhhcc-cccccccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence 578999999999 78899999999999999999995 99999999999874 469999999999999999999999
Q ss_pred EcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 212 VEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 212 VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
|||+. +|+++|++ +|+++|++.++....+. ...|++++.++++|.+.|+
T Consensus 178 vgD~~~~Di~~A~~----~G~~~v~v~~~~~~~~~----~~~~d~~i~~l~el~~~l~ 227 (230)
T d1x42a1 178 VGDNPVKDCGGSKN----LGMTSILLDRKGEKREF----WDKCDFIVSDLREVIKIVD 227 (230)
T ss_dssp EESCTTTTHHHHHT----TTCEEEEECTTSCCGGG----GGGSSEEESSTTHHHHHHH
T ss_pred eecCcHhHHHHHHH----cCCEEEEECCCCCCccc----ccCCCEEECCHHHHHHHHH
Confidence 99985 79999998 89999999998765432 2368999999999987763
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=3.7e-29 Score=207.64 Aligned_cols=174 Identities=14% Similarity=0.176 Sum_probs=128.3
Q ss_pred CC-cEEEEecCcccccChhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhcccccccccchhhHHHHHHHHHhcccccc
Q 024375 1 ME-DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSL 79 (268)
Q Consensus 1 m~-~~vlFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~vg~G~~~~~~~~~l~~~~~~~~ 79 (268)
|+ ++|+|||||||+||.+.+..+++.++++++ ++.. .+.++..+|.+....+ ..+
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g------~~~~--------~~~~~~~~~~~~~~~~--~~~-------- 56 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYG------ITQD--------HDSVYQALKVSTPFAI--ETF-------- 56 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTT------CCCC--------HHHHHHHHHHCHHHHH--HHH--------
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcC------CCcc--------HHHHHhhhhccchhhh--hhh--------
Confidence 64 999999999999999999999999999883 3321 1234444444432221 111
Q ss_pred cccccccCCcHHHHHhhhhhhhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 024375 80 RKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (268)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~---~~g~~l~ 156 (268)
.+..+ ...+.|++.+... .....+||||.++|+ ++|++++
T Consensus 57 ------------------~~~~~--------------~~~~~~~~~~~~~-----~~~~~~~~gv~~~l~~l~~~g~~~~ 99 (187)
T d2fi1a1 57 ------------------APNLE--------------NFLEKYKENEARE-----LEHPILFEGVSDLLEDISNQGGRHF 99 (187)
T ss_dssp ------------------CTTCT--------------THHHHHHHHHHHH-----TTSCCBCTTHHHHHHHHHHTTCEEE
T ss_pred ------------------hHHHH--------------HHHHHHHHHHHHH-----hhcCcccchhHHHHHHHHhhhcccc
Confidence 00000 1112233333222 234689999999998 7999999
Q ss_pred EEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCc
Q 024375 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 157 IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~ 232 (268)
|+||++.... ..|++ +++..+|+.|+|++ .||+|+++..+++++++ ++|+||||+..|+++|++ +|++
T Consensus 100 i~Sn~~~~~~-~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~----aG~~ 171 (187)
T d2fi1a1 100 LVSHRNDQVL-EILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQA----AGLD 171 (187)
T ss_dssp EECSSCTHHH-HHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHH----TTCE
T ss_pred ccccCccchh-hhhhh-hccccccccccccccccccCCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHH----cCCE
Confidence 9999988665 57885 99999999999875 35889999999999886 469999999999999999 8999
Q ss_pred EEEEecCCCCH
Q 024375 233 LYLVDWGYNTP 243 (268)
Q Consensus 233 ~i~v~wGy~~~ 243 (268)
||+|++|+...
T Consensus 172 ~i~v~~~~~~~ 182 (187)
T d2fi1a1 172 THLFTSIVNLR 182 (187)
T ss_dssp EEECSCHHHHH
T ss_pred EEEECCCCChH
Confidence 99999876543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=3.6e-26 Score=195.76 Aligned_cols=125 Identities=13% Similarity=0.079 Sum_probs=107.1
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 137 ~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
...+|||+.++|+ ++|++++|+||.+.......+++ +|+..||+.+++++ .||+|+++..+++++|++|++|+
T Consensus 107 ~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l 185 (247)
T d2gfha1 107 HMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 185 (247)
T ss_dssp TCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCccCccHHHHHHHhhcccceEEeecccchhhhhhhhh-ccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcc
Confidence 3579999999999 78999999999999999999996 99999999999764 35999999999999999999999
Q ss_pred EEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 211 FVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 211 ~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
||||+. +|+.+|++ +|++++.+.-+.+... ......|++++.++.+|.++|+
T Consensus 186 ~iGD~~~~Di~~A~~----~G~~~~~~~~~~~~~~--~~~~~~p~~~i~~l~eL~~ll~ 238 (247)
T d2gfha1 186 MVGDTLETDIQGGLN----AGLKATVWINKSGRVP--LTSSPMPHYMVSSVLELPALLQ 238 (247)
T ss_dssp EEESCTTTHHHHHHH----TTCSEEEEECTTCCCC--SSCCCCCSEEESSGGGHHHHHH
T ss_pred eeccChHhHHHHHHH----cCCeEEEEECCCCCCc--ccccCCCCEEECCHHHHHHHHH
Confidence 999996 79999999 8998766554444332 2235679999999999988763
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.93 E-value=2.5e-26 Score=195.75 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=108.1
Q ss_pred CCCCCccHHHHHH-hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEE
Q 024375 137 ANRLYPGVSDALK-LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHF 211 (268)
Q Consensus 137 ~~~lypGv~e~L~-~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~ 211 (268)
...+||++.++|+ -++++++|+||.+...+...+++ +|+..+|+.|++++ .||+|+++..+++++|++|++|+|
T Consensus 91 ~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~ 169 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (245)
T ss_dssp SCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred ccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-cccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence 3579999999999 68999999999999999999996 99999999999865 369999999999999999999999
Q ss_pred EcCcHhhHHHhhccCccCCCcEEEEecCC------------CCHHH--------HHhcCCCCCeeecChhHHhhhcC
Q 024375 212 VEDRLATLKNVIKEPELDGWNLYLVDWGY------------NTPKE--------RAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 212 VGDs~~Di~aa~~~~~~agi~~i~v~wGy------------~~~~e--------l~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
|||+.+||.+|++ +|+++|+|..+- ..+.. .......||+++.++.+|..+++
T Consensus 170 VgD~~~di~~A~~----aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~ 242 (245)
T d1qq5a_ 170 VSSNGFDVGGAKN----FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVR 242 (245)
T ss_dssp EESCHHHHHHHHH----HTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHH
T ss_pred EeCCHHHHHHHHH----cCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHH
Confidence 9999999999999 899999997431 11100 01224579999999999988763
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.93 E-value=4.9e-26 Score=191.15 Aligned_cols=122 Identities=14% Similarity=0.170 Sum_probs=109.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~ 209 (268)
...+||++.++|+ ++|++++|+||......+..+++ +++..+|+.+++++ .||+|+++..+++++|++|++|
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~ 169 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 169 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceE
Confidence 4578999999999 79999999999999999999995 99999999999875 3599999999999999999999
Q ss_pred EEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 210 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 210 ~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
+||||+..|+++|++ +|+.+|+|.++....++ ....|++++.++.+|.++
T Consensus 170 l~VgD~~~Di~~A~~----aG~~~v~v~r~~~~~~~---~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 170 LFVASNAWDATGARY----FGFPTCWINRTGNVFEE---MGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp EEEESCHHHHHHHHH----HTCCEEEECTTCCCCCS---SSCCCSEEESSHHHHHTT
T ss_pred EEEecChHhHHHHHH----cCCEEEEEcCCCCCccc---ccCCCCEEECCHHHHHhh
Confidence 999999999999999 89999999877655443 345799999999999765
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.92 E-value=3.5e-26 Score=186.84 Aligned_cols=105 Identities=16% Similarity=0.134 Sum_probs=92.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch-HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 212 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~-~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~V 212 (268)
..++||||.++|+ ++|++++|+||+++ ..++.+++. +++..+|..+.+. .+|+|+++..+++++|++|++|+||
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~~~-~kp~~~~~~~~~~~~~~~~~~~l~i 121 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQREIY-PGSKVTHFERLHHKTGVPFSQMVFF 121 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEEES-SSCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeeecc-cCCChHHHHHHHHHhCCChHHEEEE
Confidence 4589999999999 89999999998776 567778885 9999999888654 4699999999999999999999999
Q ss_pred cCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHh
Q 024375 213 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 248 (268)
Q Consensus 213 GDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~ 248 (268)
||+.+|+++|++ +|++||+|.||| +.+++++
T Consensus 122 gD~~~di~aA~~----aG~~~i~v~~G~-~~~~~~~ 152 (164)
T d1u7pa_ 122 DDENRNIIDVGR----LGVTCIHIRDGM-SLQTLTQ 152 (164)
T ss_dssp ESCHHHHHHHHT----TTCEEEECSSCC-CHHHHHH
T ss_pred cCCHHHHHHHHH----cCCEEEEECCCC-ChHHHHH
Confidence 999999999999 899999999999 4555543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=8.7e-25 Score=184.86 Aligned_cols=121 Identities=12% Similarity=0.092 Sum_probs=100.5
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec-CC----CCCcHHHHHHHHhcCCCCCC
Q 024375 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-LG----TGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 136 ~~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g-~~----~~pkp~~l~~~~~~l~~~~~ 207 (268)
....+|||+.++|+ ++|++++|+||.+....+..++. .|+..+|+.... .+ .||+|++++.+++++|++|+
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~ 202 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN 202 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcC
Confidence 34689999999999 79999999999999999999995 999888775432 22 36999999999999999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
+|+||||+.+|+.+|++ +|+++|+|.++.......... .|+.++.+++||
T Consensus 203 ~~l~vgD~~~dv~aA~~----aG~~ti~v~r~g~~~~~~~~~--~~~~~i~sl~EL 252 (253)
T d1zs9a1 203 NILFLTDVTREASAAEE----ADVHVAVVVRPGNAGLTDDEK--TYYSLITSFSEL 252 (253)
T ss_dssp GEEEEESCHHHHHHHHH----TTCEEEEECCTTCCCCCHHHH--HHSCEESSGGGC
T ss_pred cEEEEeCCHHHHHHHHH----cCCEEEEEeCCCCCCCchhhc--CCCcEECChHHh
Confidence 99999999999999999 899999999865443222222 345788888875
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=3.2e-25 Score=186.06 Aligned_cols=110 Identities=16% Similarity=0.068 Sum_probs=96.8
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCC
Q 024375 135 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPE 203 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~~g~~l~IvTnK----~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~ 203 (268)
.....+|||+.++|. ++|++++|+||. ........+.. +|+..|||.+++++ .||+|++++.++++++
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence 344689999999999 799999999974 45566677774 89999999999875 3699999999999999
Q ss_pred CCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhc
Q 024375 204 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 249 (268)
Q Consensus 204 ~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~ 249 (268)
++|++|+||||+..|+.+|++ +|+++|+|.+|....++++++
T Consensus 172 v~p~~~l~IgD~~~Di~~A~~----aG~~ti~V~~~~~~~~el~~~ 213 (222)
T d1cr6a1 172 AKPNEVVFLDDFGSNLKPARD----MGMVTILVHNTASALRELEKV 213 (222)
T ss_dssp SCTTSEEEEESSSTTTHHHHH----HTCEEEECCSSSHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHH----cCCEEEEECCcchHHHHHHHh
Confidence 999999999999999999999 899999999998878888765
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=5.4e-24 Score=177.18 Aligned_cols=109 Identities=17% Similarity=0.039 Sum_probs=92.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchH----HHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSR----FVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ 205 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~----~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~ 205 (268)
...++||+.++|. ++|++++|+||.... ........ .++..+|+.|++++ .||+|+++..+++++|++
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 175 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 175 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence 3578999999999 799999999986544 33444443 67888999999864 469999999999999999
Q ss_pred CCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcC
Q 024375 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAA 250 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~ 250 (268)
|++|+||||+..|+++|++ +|+++|+|.+|....+++++..
T Consensus 176 p~e~l~VgD~~~Di~~A~~----~G~~ti~v~~~~~~~~~l~~~~ 216 (225)
T d1zd3a1 176 PSEVVFLDDIGANLKPARD----LGMVTILVQDTDTALKELEKVT 216 (225)
T ss_dssp GGGEEEEESCHHHHHHHHH----TTCEEEECSSHHHHHHHHHHHH
T ss_pred ccceeEEecCHHHHHHHHH----cCCEEEEECCcchhHHHHHHcc
Confidence 9999999999999999999 8999999999877777777663
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=1.2e-21 Score=162.27 Aligned_cols=122 Identities=18% Similarity=0.202 Sum_probs=96.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecC-------------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------- 186 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~------------- 186 (268)
.++||||.++|+ ++|++++|+||++. ......+.. .|+.. ....++.
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~cp~~p~~~~~~~~~~ 103 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVDL-DGIYYCPHHPQGSVEEFRQV 103 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCCC-SEEEEECCBTTCSSGGGBSC
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhh-hcccc-cceeeccccccccccccccc
Confidence 468999999999 79999999999984 233344453 55532 2223321
Q ss_pred --CCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcE-EEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 187 --GTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 187 --~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~-i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
..||+|.++..+++++++++++++|||||.+||++|++ ||+++ ++|.+|++..++.+. .|++++.++.|+
T Consensus 104 ~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~----Ag~~~~~lv~~g~~~~~~~~~---~ad~v~~~l~dl 176 (182)
T d2gmwa1 104 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVA----ANVGTKVLVRTGKPITPEAEN---AADWVLNSLADL 176 (182)
T ss_dssp CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHH----TTCSEEEEESSSSCCCHHHHH---HCSEEESCGGGH
T ss_pred ccccCCccccccchhhhcccccccccccCCCHHHHHHHHH----hCCCcEEEECCCCCCCccccc---CCCEEECCHHHH
Confidence 13699999999999999999999999999999999998 89965 889999877665544 378999999999
Q ss_pred hhhcC
Q 024375 264 CTKLK 268 (268)
Q Consensus 264 ~~~~~ 268 (268)
.++||
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88774
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=2e-20 Score=156.05 Aligned_cols=117 Identities=13% Similarity=0.171 Sum_probs=93.3
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHH-----------HHhcCCCCCCceEecCC---CCCcHHHHHHHHhcC
Q 024375 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLL-----------RELAGVTITPDRLYGLG---TGPKVNVLKQLQKKP 202 (268)
Q Consensus 137 ~~~lypGv~e~L~~~g~~l~IvTnK~~~~~~~~L-----------~~~~gl~~~f~~i~g~~---~~pkp~~l~~~~~~l 202 (268)
...+|+++.+++. ++.++++.|++.......+. +. .|+..||+.|++++ .||+|+++..+++++
T Consensus 95 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~l 172 (225)
T d2g80a1 95 KAPVYADAIDFIK-RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-LDLNSYIDGYFDINTSGKKTETQSYANILRDI 172 (225)
T ss_dssp CBCCCHHHHHHHH-HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCC-BCCGGGCCEEECHHHHCCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHh-hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHh-cCCccccceeeeccccCCCCChhHhHHHHHhc
Confidence 4578999999886 55678999999887665553 43 68888999999865 469999999999999
Q ss_pred CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
|++|++|+||||+..|+.+|++ +|+++|+|....... .....|..++.+++||
T Consensus 173 g~~p~e~l~VgD~~~Dv~~A~~----aG~~ti~v~r~g~~~----~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 173 GAKASEVLFLSDNPLELDAAAG----VGIATGLASRPGNAP----VPDGQKYQVYKNFETL 225 (225)
T ss_dssp TCCGGGEEEEESCHHHHHHHHT----TTCEEEEECCTTSCC----CCSSCCSCEESCSTTC
T ss_pred ccCchhceeecCCHHHHHHHHH----cCCEEEEEeCCCCCC----CcccCCCCccCChhhC
Confidence 9999999999999999999998 899999998643221 1233456677777764
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.6e-22 Score=164.13 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=86.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEE
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 210 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~ 210 (268)
..+++|+.+++. .+|++++|+||.+...+...+..+.|+..+|+.+++++ .||+|++++.+++++|++|++|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l 162 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence 468999999988 79999999999988887777775237888999999764 46999999999999999999999
Q ss_pred EEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 211 FVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 211 ~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
|||||.+|+++|++ +|+++|+|+-.
T Consensus 163 ~vgDs~~di~~A~~----aG~~ti~v~~~ 187 (197)
T d2b0ca1 163 FFDDNADNIEGANQ----LGITSILVKDK 187 (197)
T ss_dssp EEESCHHHHHHHHT----TTCEEEECCST
T ss_pred EEeCCHHHHHHHHH----cCCEEEEECCC
Confidence 99999999999998 89999998643
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.81 E-value=2e-21 Score=163.90 Aligned_cols=120 Identities=8% Similarity=0.087 Sum_probs=90.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCce---EecCC--------------CCCcHHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR---LYGLG--------------TGPKVNVLKQ 197 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~---i~g~~--------------~~pkp~~l~~ 197 (268)
.+++||+.++|+ ++|++++|+||+.+..++.+|++ +|+..+|.. .+..+ .++||+.+..
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 152 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS 152 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHH
Confidence 579999999999 79999999999999999999995 988766521 11111 1378889999
Q ss_pred HHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 198 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 198 ~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
++++++.++++++|||||.+|+.+|++ ||+.+ ++ |+. .+.+... ..|...+++..++...|
T Consensus 153 ~~~~~~~~~~~~i~iGDs~~Dl~~a~~----A~~~~-a~--~~~-~~~~~~~-~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 153 VIHELSEPNQYIIMIGDSVTDVEAAKL----SDLCF-AR--DYL-LNECREQ-NLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp HHHHHCCTTCEEEEEECCGGGHHHHHT----CSEEE-EC--HHH-HHHHHHT-TCCEECCSSHHHHHHHH
T ss_pred HHHHhcCCCceEEEEeCchhhHHHHHH----CCEEE-Ee--cch-HHHHHHc-CCCeeecCCHHHHHHHH
Confidence 999999999999999999999999998 67533 33 332 2334332 34666778888875443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=7.5e-22 Score=170.69 Aligned_cols=111 Identities=13% Similarity=0.111 Sum_probs=85.2
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhc
Q 024375 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIK 224 (268)
Q Consensus 150 ~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~ 224 (268)
.++....++|++....-...+.. ..+..+|+.+.+.+ .||+|+++..+++++|++|++|+||||++ +||.+|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~ 212 (250)
T d2c4na1 134 VANGARFIATNPDTHGRGFYPAC-GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ 212 (250)
T ss_dssp HHTTCEEEESCCCSBSSTTCBCH-HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHH
T ss_pred HhccccccccccccccCceeecC-cchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHH
Confidence 34556788898764321111110 11122344444544 36999999999999999999999999996 49999999
Q ss_pred cCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhh
Q 024375 225 EPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 265 (268)
Q Consensus 225 ~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~ 265 (268)
||+++|+|.||+++.++++..+..||+++.++.+|..
T Consensus 213 ----aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~~ 249 (250)
T d2c4na1 213 ----AGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEIDV 249 (250)
T ss_dssp ----TTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCCC
T ss_pred ----CCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhCc
Confidence 8999999999999999998888899999999999864
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.80 E-value=9.6e-20 Score=157.50 Aligned_cols=71 Identities=18% Similarity=0.291 Sum_probs=67.4
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcHh-hHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHH
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~~-Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~ 263 (268)
||+|+++..+++++|++|++|+||||+.. ||++|++ +|+++|+|+||+.+++++......||+++.++.||
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~----aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIK----NDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHH----TTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHH----CCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 79999999999999999999999999976 9999999 89999999999999988888888999999999987
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1.4e-20 Score=153.65 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=77.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHhcCCCC---CCceEecCC----CCCcH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTI---TPDRLYGLG----TGPKV 192 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---------------~~~~~~~L~~~~gl~~---~f~~i~g~~----~~pkp 192 (268)
..+||||.++|+ ++|++++|+||++ .......|+. .|+.. ||+..++.+ .||+|
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~i~~~~~~~~~~~~~~KP~p 107 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQFDEVLICPHLPADECDCRKPKV 107 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHH-TTCCEEEEEEECCCGGGCCSSSTTSS
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccc-cccccceeeecccccccccccccccc
Confidence 578999999999 7999999999986 2345566774 77642 333323322 36999
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH
Q 024375 193 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 244 (268)
Q Consensus 193 ~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~ 244 (268)
+++++++++++++|++|+||||+..|+++|++ ||++++++.-+..+-.
T Consensus 108 ~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~----aG~~~i~i~~~~~~~~ 155 (161)
T d2fpwa1 108 KLVERYLAEQAMDRANSYVIGDRATDIQLAEN----MGINGLRYDRETLNWP 155 (161)
T ss_dssp GGGGGGC----CCGGGCEEEESSHHHHHHHHH----HTSEEEECBTTTBCHH
T ss_pred HHHHHHHHhcCCChhcEEEECCCHHHHHHHHH----cCCeEEEECCCCCCHH
Confidence 99999999999999999999999999999999 8999999977665443
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.77 E-value=3.9e-19 Score=153.66 Aligned_cols=76 Identities=24% Similarity=0.283 Sum_probs=72.0
Q ss_pred CCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhc
Q 024375 189 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 267 (268)
Q Consensus 189 ~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~ 267 (268)
||+|.++..+++++|++|++++||||+. +||.+|++ +|+++|+|.||+.+.+++...+..||+++.+++||...|
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~----aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKN----AGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHH----HTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHH----CCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 6999999999999999999999999995 69999999 899999999999999999888889999999999999887
Q ss_pred C
Q 024375 268 K 268 (268)
Q Consensus 268 ~ 268 (268)
+
T Consensus 261 ~ 261 (261)
T d1vjra_ 261 Q 261 (261)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.73 E-value=2.8e-18 Score=157.48 Aligned_cols=122 Identities=16% Similarity=0.004 Sum_probs=102.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCce--EecC-C--------------CCCcHHHHHHH
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR--LYGL-G--------------TGPKVNVLKQL 198 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~--i~g~-~--------------~~pkp~~l~~~ 198 (268)
+|+|||.++|+ ++|++++|+||++...++.++++ +||..||+. +++. + .||+|+++..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 47789999999 79999999999999999999996 999999864 3321 1 24899999888
Q ss_pred HhcC--------------CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHH---HHHhcCCCCCeeecChh
Q 024375 199 QKKP--------------EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK---ERAEAASMPRIQLLQLS 261 (268)
Q Consensus 199 ~~~l--------------~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~---el~~~~~~P~~~~~~~~ 261 (268)
+..+ +..+++|+||||+.+|+.+|++ ||+++|||.||+++.+ ++++. .+|++++++.
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~----Ag~~~Igv~~G~~g~~~~~el~~~--~AD~ii~~~~ 367 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK----IGATFIGTLTGLKGKDAAGELEAH--HADYVINHLG 367 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH----HTCEEEEESCBTTBGGGHHHHHHT--TCSEEESSGG
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHH----CCCCEEEEecCCCCcccHHHHHhC--CCCEEECCHH
Confidence 7544 5678899999999999999999 8999999999998754 44444 5779999999
Q ss_pred HHhhhc
Q 024375 262 DFCTKL 267 (268)
Q Consensus 262 ~~~~~~ 267 (268)
+|..+|
T Consensus 368 el~~il 373 (380)
T d1qyia_ 368 ELRGVL 373 (380)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 998876
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.73 E-value=1.1e-18 Score=150.46 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=67.6
Q ss_pred CCCcHHHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHh
Q 024375 188 TGPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 264 (268)
Q Consensus 188 ~~pkp~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~ 264 (268)
.||+|+++.++++++|++|++|+||||+. +||++|++ ||+++|+|.||+...+++......||+++.+++||.
T Consensus 179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~----aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQ----NGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHH----HTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred cccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHH----CCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 36999999999999999999999999996 59999998 899999999999988888888889999999999873
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.6e-17 Score=139.29 Aligned_cols=113 Identities=13% Similarity=0.261 Sum_probs=80.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCC------ceE-----ecCCCC-------CcHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP------DRL-----YGLGTG-------PKVNVLK 196 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f------~~i-----~g~~~~-------pkp~~l~ 196 (268)
..++||+.++|+ ++|++++|||++....++.+++. +|++.+. ... .|.... .|.+.+.
T Consensus 81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~ 159 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 159 (217)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHH
Confidence 578999999999 79999999999999999999996 9997431 111 111111 2556777
Q ss_pred HHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH-HHHHhcCCCCCeeecChhHH
Q 024375 197 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP-KERAEAASMPRIQLLQLSDF 263 (268)
Q Consensus 197 ~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~-~el~~~~~~P~~~~~~~~~~ 263 (268)
.+.+. .++++|+|||||.+|+.+++. ||+ +|.||.... ...++ .+++.+.++.+|
T Consensus 160 ~~~~~--~~~~~~~~vGDs~~Di~~~~~----ag~---~va~~~~~~~~~~~~---~ad~~i~~f~el 215 (217)
T d1nnla_ 160 LLKEK--FHFKKIIMIGDGATDMEACPP----ADA---FIGFGGNVIRQQVKD---NAKWYITDFVEL 215 (217)
T ss_dssp HHHHH--HCCSCEEEEESSHHHHTTTTT----SSE---EEEECSSCCCHHHHH---HCSEEESCGGGG
T ss_pred HHHhc--cCccccEEEEeCHhhHHHHHh----CCc---eEEECCCHHHHHHHH---hCCCEeCCHHHh
Confidence 76554 557899999999999999998 775 456665432 22222 356788777665
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.69 E-value=1e-16 Score=131.53 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=94.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC--------------CCCcHHHHHHHH
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------------TGPKVNVLKQLQ 199 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~--------------~~pkp~~l~~~~ 199 (268)
...+++|+.++++ .+|..++++|++....+....++ ++...++......+ .++++..+..++
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence 3578999999999 79999999999999999999996 88877665544322 126788999999
Q ss_pred hcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhhhcC
Q 024375 200 KKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCTKLK 268 (268)
Q Consensus 200 ~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~~~~ 268 (268)
+.+++.++++++||||.+|+.+++. ||++ |.++ ..+++++. .++++.+ +.++...||
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~----ag~~---va~n--a~~~lk~~---Ad~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKK----AGLK---IAFC--AKPILKEK---ADICIEKRDLREILKYIK 210 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHH----CSEE---EEES--CCHHHHTT---CSEEECSSCGGGGGGGCC
T ss_pred HHhcccccceEEecCCcChHHHHHH----CCCC---EEEC--CCHHHHHh---CCEEEcCCCHHHHHHHhC
Confidence 9999999999999999999999998 7754 3333 34456543 4699985 468887775
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.68 E-value=1.8e-17 Score=140.38 Aligned_cols=99 Identities=24% Similarity=0.210 Sum_probs=80.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhcCCCCCCceEecCC------------
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG------------ 187 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~---------------~~~~~~L~~~~gl~~~f~~i~g~~------------ 187 (268)
.++||||.|+|+ ++|++++||||++. ......|+. .|+ +++.+++..
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~-~g~--~~~~~~~~~~~~~~~~~~~~~ 123 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGV--FVDMVLACAYHEAGVGPLAIP 123 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTC--CCSEEEEECCCTTCCSTTCCS
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhh-ccc--ccceEEEeccccccccccccc
Confidence 479999999999 79999999999762 233444553 554 334443221
Q ss_pred ----CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCH
Q 024375 188 ----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 243 (268)
Q Consensus 188 ----~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~ 243 (268)
.||+|.++.++++++++++++|+||||+.+|+++|++ |||++++|.+|++..
T Consensus 124 ~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~----AGi~~i~v~~g~~~~ 179 (209)
T d2o2xa1 124 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKR----AGLAQGWLVDGEAAV 179 (209)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHH----TTCSEEEEETCCCEE
T ss_pred ccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHH----CCCcEEEEeCCCCcc
Confidence 2699999999999999999999999999999999999 899999999998754
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.67 E-value=1.9e-17 Score=131.10 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=70.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHH---HHHHHHhcC------CCCCCceEecCCC---CCcHHHHHHHHhcC
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFV---ETLLRELAG------VTITPDRLYGLGT---GPKVNVLKQLQKKP 202 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~---~~~L~~~~g------l~~~f~~i~g~~~---~pkp~~l~~~~~~l 202 (268)
..+||||.++|+ ++|++++|+||++.... ..-|+. ++ ...+++....... .|++......+.++
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM-TRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH-HHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHH-HhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHh
Confidence 478999999999 79999999999985432 222321 11 1234555554332 26677777777766
Q ss_pred CCCCCc-EEEEcCcHhhHHHhhccCccCCCcEEEEecC
Q 024375 203 EHQGLR-LHFVEDRLATLKNVIKEPELDGWNLYLVDWG 239 (268)
Q Consensus 203 ~~~~~~-~~~VGDs~~Di~aa~~~~~~agi~~i~v~wG 239 (268)
...+.+ ++||||+..|+++|++ +|++|++|+||
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~----~Gi~~~~V~~G 147 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRR----IGVECWQVASG 147 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHH----TTCCEEECSCC
T ss_pred ccCCCceEEEEcCCHHHHHHHHH----CCCcEEEeCCC
Confidence 665555 5678999999999999 89999999999
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.42 E-value=1.8e-12 Score=105.39 Aligned_cols=117 Identities=10% Similarity=0.070 Sum_probs=87.3
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEe--cCC------CCCcHHHHHHHHhcCCCCCC
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY--GLG------TGPKVNVLKQLQKKPEHQGL 207 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~--g~~------~~pkp~~l~~~~~~l~~~~~ 207 (268)
...+|+....+. ..+.+.+++|............. +++..++.... ... ..+++......++.++.+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 146 (206)
T d1rkua_ 68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 146 (206)
T ss_dssp CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeecccccccccccchhhHHHHHHHhccccc
Confidence 467889888888 78999999999999999999995 88765543222 111 12666777888888999999
Q ss_pred cEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCee-ecChhHHhhh
Q 024375 208 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQ-LLQLSDFCTK 266 (268)
Q Consensus 208 ~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~-~~~~~~~~~~ 266 (268)
++++|||+.||+.+.+. || +||..+. .+++.+. .|+++ ..+.+++.+.
T Consensus 147 eviaiGDg~NDi~Ml~~----Ag---~gIAmna--~~~v~~~--~~~~~~~~~~~d~~~~ 195 (206)
T d1rkua_ 147 RVIAAGDSYNDTTMLSE----AH---AGILFHA--PENVIRE--FPQFPAVHTYEDLKRE 195 (206)
T ss_dssp EEEEEECSSTTHHHHHH----SS---EEEEESC--CHHHHHH--CTTSCEECSHHHHHHH
T ss_pred ceEEecCCccCHHHHHh----CC---ccEEECC--CHHHHHh--CCCceeecCHHHHHHH
Confidence 99999999999999998 55 5566653 3444432 36675 5778888654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.98 E-value=4.1e-10 Score=92.76 Aligned_cols=96 Identities=11% Similarity=-0.012 Sum_probs=65.5
Q ss_pred CCCcEEEEcC-CchHHHHHHHHHhcCCCCCCceEecCC-------CCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHh
Q 024375 151 ASSRIYIVTS-NQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 222 (268)
Q Consensus 151 ~g~~l~IvTn-K~~~~~~~~L~~~~gl~~~f~~i~g~~-------~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa 222 (268)
+...+.+... ...+.++.++++ ++.... ...+.. ..+|+..+..++++++++++++++|||+.||+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml 184 (230)
T d1wr8a_ 108 RRAGLVIMRETINVETVREIINE-LNLNLV--AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAF 184 (230)
T ss_dssp CSSCEEECTTTSCHHHHHHHHHH-TTCSCE--EEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHH
T ss_pred ceeeEEEecccccHHHHHHHHHH-hccceE--EeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHH
Confidence 3344444443 345667888885 765422 222221 12899999999999999999999999999999999
Q ss_pred hccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 223 IKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 223 ~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
+. || ++|..|..++ ++++. .++++.+.
T Consensus 185 ~~----ag---~~vav~na~~-~~k~~---A~~v~~~~ 211 (230)
T d1wr8a_ 185 KV----VG---YKVAVAQAPK-ILKEN---ADYVTKKE 211 (230)
T ss_dssp HH----SS---EEEECTTSCH-HHHTT---CSEECSSC
T ss_pred HH----CC---eEEEECCCCH-HHHHh---CCEEECCC
Confidence 98 66 4566675553 45443 45777664
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.97 E-value=1.6e-09 Score=90.04 Aligned_cols=60 Identities=7% Similarity=-0.156 Sum_probs=47.8
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
.|...+..+++++|++++++++|||+.+|+.+.+. +| ++|..|-..+ ++++. +++++.++
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~----a~---~~vav~na~~-~~k~~---ad~v~~~~ 210 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL----PV---RKACPANATD-NIKAV---SDFVSDYS 210 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS----SS---EEEECTTSCH-HHHHH---CSEECSCC
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHHHHH----CC---eEEEECCCcH-HHHHh---CCEEECCC
Confidence 78899999999999999999999999999999998 55 3444554443 45553 56888776
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.80 E-value=1.2e-08 Score=86.79 Aligned_cols=61 Identities=18% Similarity=0.112 Sum_probs=46.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
.|...+..+++.++++++++++|||+.||+.+-+. +|. +|.=|-+. +++++. .++++.+..
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~----~~~---sva~~na~-~~~k~~---A~~i~~~~~ 250 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEE----AGL---RVAMENAI-EKVKEA---SDIVTLTNN 250 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTT----CSE---EEECTTSC-HHHHHH---CSEECCCTT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHh----CCc---EEEeCCCC-HHHHHh---CCEEcCCCC
Confidence 78999999999999999999999999999999997 553 34445334 455554 256665544
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.56 E-value=5.2e-08 Score=81.11 Aligned_cols=90 Identities=11% Similarity=0.010 Sum_probs=64.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhcCCC--CCCceEecCCC--C-CcHHHHHHHHhcCCCC
Q 024375 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVT--ITPDRLYGLGT--G-PKVNVLKQLQKKPEHQ 205 (268)
Q Consensus 137 ~~~lypGv~e~L~---~~g~~l~IvTnK~~---~~~~~~L~~~~gl~--~~f~~i~g~~~--~-pkp~~l~~~~~~l~~~ 205 (268)
...+.||+.++|+ ++|++++.|||... +.+.+.|++.+|+. .....++..+. | ++...| +++++
T Consensus 84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~I----k~y~I- 158 (209)
T d2b82a1 84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWL----QDKNI- 158 (209)
T ss_dssp GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHH----HHTTE-
T ss_pred ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHH----HHcCe-
Confidence 3567899999999 89999999999764 34445553237874 33345555432 3 555544 34666
Q ss_pred CCcEEEEcCcHhhHHHhhccCccCCCcEEEEec
Q 024375 206 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 206 ~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~w 238 (268)
.+|+||...|+.+|++ ||+++|-|.=
T Consensus 159 ---~l~~GD~l~Df~aA~e----agi~~iRi~r 184 (209)
T d2b82a1 159 ---RIFYGDSDNDITAARD----VGARGIRILR 184 (209)
T ss_dssp ---EEEEESSHHHHHHHHH----TTCEEEECCC
T ss_pred ---EEEecCCHHHHhHHHH----cCCCceEeec
Confidence 4999999999999999 8899888743
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.49 E-value=8.1e-08 Score=79.27 Aligned_cols=94 Identities=24% Similarity=0.283 Sum_probs=71.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHhcCCCCCCceEecCC----CCCcHHHHHHHHh
Q 024375 140 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQK 200 (268)
Q Consensus 140 lypGv~e~L~---~~g~~l~IvTnK~~------------~~~~~~L~~~~gl~~~f~~i~g~~----~~pkp~~l~~~~~ 200 (268)
+||+|.+.|+ ++|+.++|+||-+. ...+.+++. ++.. +...++.. .||+|-|+..+++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~-l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHH-cCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 5899999999 79999999999642 124556674 7654 34444432 4599999999999
Q ss_pred cCC----CCCCcEEEEcCc-----------------HhhHHHhhccCccCCCcEEEEecCCCCHHHHH
Q 024375 201 KPE----HQGLRLHFVEDR-----------------LATLKNVIKEPELDGWNLYLVDWGYNTPKERA 247 (268)
Q Consensus 201 ~l~----~~~~~~~~VGDs-----------------~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~ 247 (268)
+++ ++.++++||||. ..|++.|++ +|+++. +++++-
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N----~gikF~-------~pee~F 184 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN----VGLPFA-------TPEEFF 184 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHH----HTCCEE-------CHHHHT
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHH----CCCccc-------CHHHHh
Confidence 875 778899999995 499999998 788864 566653
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.44 E-value=3.2e-07 Score=80.14 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=62.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCC------------CC------CcHHHHH
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------------TG------PKVNVLK 196 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~------------~~------pkp~~l~ 196 (268)
..+-||+.++++ ++|++++|+|+--..+++.+|++ +|+...--.|++.. .+ .|-+.+.
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~-lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHH-TTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-cCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence 578899999999 89999999999999999999996 88753211344311 01 2334444
Q ss_pred HHHhc--CCCCCCcEEEEcCcHhhHHHhhc
Q 024375 197 QLQKK--PEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 197 ~~~~~--l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
+.... ......++++||||.+|+.+|+.
T Consensus 213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g 242 (291)
T d2bdua1 213 KNTDYFSQLKDNSNIILLGDSQGDLRMADG 242 (291)
T ss_dssp TTHHHHHHTTTCCEEEEEESSSGGGGTTTT
T ss_pred hhHHHHhccCCcCcEEEEeCCHhHHHHHhC
Confidence 43332 22356789999999999999885
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.42 E-value=4.4e-07 Score=76.83 Aligned_cols=61 Identities=16% Similarity=0.011 Sum_probs=46.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
.|...+..+++.+|++++++++|||+.||+.+-+. +|. .|+|..| . +++++. .+++..+..
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~----a~~-svam~na--~-~~~k~~---A~~v~~~~~ 273 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEA----AGK-GVAMGNA--R-EDIKSI---ADAVTLTND 273 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHH----SSE-EEECTTC--C-HHHHHH---CSEECCCGG
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHh----CCe-EEEeCCC--C-HHHHHh---CCEEcCCCC
Confidence 78999999999999999999999999999999998 553 3466544 3 445543 347766543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.30 E-value=7.5e-06 Score=68.53 Aligned_cols=59 Identities=14% Similarity=0.062 Sum_probs=45.2
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 259 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~ 259 (268)
.|...+..+++.++++++++++|||+.||+.+-+. +|.. |+|..+ . +++++. .++++.+
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~----a~~~-va~~na--~-~~~k~~---a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSN----FKYS-FAVANA--T-DSAKSH---AKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHS----CSEE-EECTTC--C-HHHHHH---SSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHh----CCcE-EEeCCC--C-HHHHHh---CCEEECC
Confidence 78999999999999999999999999999999997 6643 445433 3 455543 2466654
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.28 E-value=3.8e-07 Score=76.78 Aligned_cols=61 Identities=13% Similarity=-0.024 Sum_probs=45.9
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
.|...++.+++.++++++++++|||+.+|+.+-+. +| +++.=| +..+++++. .+++..+..
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~----~~---~~~am~-na~~~lk~~---a~~i~~~~~ 257 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEY----AG---VGVAVD-NAIPSVKEV---ANFVTKSNL 257 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SS---EEEECT-TSCHHHHHH---CSEECCCTT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHh----CC---cEEEeC-CCCHHHHHh---CCEEcCCCC
Confidence 68899999999999999999999999999999998 55 333334 334566654 246665544
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=1e-06 Score=71.51 Aligned_cols=109 Identities=16% Similarity=0.122 Sum_probs=70.3
Q ss_pred ccCCCCCccHHHHHH---h-CCCcEEEEcCCchH------HHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCC
Q 024375 135 IGANRLYPGVSDALK---L-ASSRIYIVTSNQSR------FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 204 (268)
Q Consensus 135 ~~~~~lypGv~e~L~---~-~g~~l~IvTnK~~~------~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~ 204 (268)
....+|+||+.|+|. + .+..+.|+|+.+.. ....=|++|+|-..+...+++.+ | ..+..
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-K----------~~~~~ 138 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-K----------TVVSA 138 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-S----------TTSCC
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-c----------ceecC
Confidence 345689999999998 4 35578899987633 22334676555433334444433 2 11222
Q ss_pred CCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhh
Q 024375 205 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 266 (268)
Q Consensus 205 ~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~ 266 (268)
+ ++|.|++..+.++.+ +|+.+|...+.|+... ..+.+-..+.+++|++..
T Consensus 139 d----~lIDD~p~n~~~~~~----~g~~~il~~~~~N~~~----~~~~~~~Rv~~W~e~~~~ 188 (195)
T d1q92a_ 139 D----LLIDDRPDITGAEPT----PSWEHVLFTACHNQHL----QLQPPRRRLHSWADDWKA 188 (195)
T ss_dssp S----EEEESCSCCCCSCSS----CSSEEEEECCTTTTTC----CCCTTCEEECCTTSCHHH
T ss_pred e----EEecCcHHHHHHHhc----CCCeEEEECCCcccCC----CCCCCceeeCCHHHHHHH
Confidence 2 999999999988876 8999999999986531 112334667788776543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.20 E-value=9.2e-06 Score=67.98 Aligned_cols=61 Identities=13% Similarity=0.061 Sum_probs=46.0
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 261 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~ 261 (268)
.|-..+..+++.+|++++++++|||+.+|+.+-+. +| .+|.=|-+. +++++. .+++..+..
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~----ag---~~vam~Na~-~~lk~~---A~~v~~~~~ 250 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKM----AR---YSFAMGNAA-ENIKQI---ARYATDDNN 250 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----CS---EEEECTTCC-HHHHHH---CSEECCCGG
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHh----CC---eEEEeCCCC-HHHHHh---CCEEcCCCC
Confidence 68899999999999999999999999999999987 44 333334333 456554 247776644
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.13 E-value=1.4e-06 Score=71.50 Aligned_cols=35 Identities=14% Similarity=-0.071 Sum_probs=31.8
Q ss_pred CcHHHHHHHHhcCC-CCCCcEEEEcCcHhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPE-HQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~-~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.|...+..+++.++ ..+++++.|||+.||+.+-+.
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~ 214 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV 214 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT
T ss_pred ccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHc
Confidence 78888999999884 888999999999999999997
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.12 E-value=1.5e-06 Score=73.04 Aligned_cols=60 Identities=8% Similarity=-0.042 Sum_probs=45.8
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecCh
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQL 260 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~ 260 (268)
.|...++.+++++|++++++++|||+.||+.+-+. +|. +|+| |-+. +++++.. +++..+.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~----a~~-svav--~na~-~~lk~~A---~~vt~~~ 245 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRH----AAI-GVAM--GQAK-EDVKAAA---DYVTAPI 245 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH----SSE-EEEC--TTSC-HHHHHHS---SEECCCG
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHh----CCe-EEEe--CCCC-HHHHHhC---CEEeCCC
Confidence 78899999999999999999999999999999987 565 3555 3334 4455432 4666653
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.92 E-value=5.9e-05 Score=62.06 Aligned_cols=35 Identities=14% Similarity=-0.015 Sum_probs=33.4
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
.|...+..+++.+|++++++++|||+.+|+.+-+.
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~ 196 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET 196 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhh
Confidence 68899999999999999999999999999999987
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=97.91 E-value=1.2e-05 Score=65.04 Aligned_cols=42 Identities=7% Similarity=-0.105 Sum_probs=31.8
Q ss_pred CcHHHHHHH---HhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEE
Q 024375 190 PKVNVLKQL---QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 190 pkp~~l~~~---~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v 236 (268)
.|...+..+ ++++|+++++++.|||+.||+.+-+. +|. .|+|
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~----a~~-~vaV 228 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV----MDY-AVIV 228 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHT----SSE-EEEC
T ss_pred hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHh----CCe-EEEE
Confidence 555555444 45679999999999999999999998 664 3444
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.81 E-value=5e-05 Score=58.40 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=72.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCC-CcHHHHHHHHhcCCCCCCcEEEEcC
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 214 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~-pkp~~l~~~~~~l~~~~~~~~~VGD 214 (268)
++-|++.++++ +.|+++.|+|.-....+..+-++ +|++ .+++.-.. .|.+.+....+ ...+.||||
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI~----~v~~~~~p~~k~~~v~~~q~-----~~~v~~vGD 90 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQA-----KEVVAFVGD 90 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCHHHHHHHHHHHTT-----TSCEEEEEC
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhhh----hhccccchhHHHHHHHHHHc-----CCEEEEEeC
Confidence 57789999988 89999999999999999999996 9984 45543321 44555544322 246899999
Q ss_pred cHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhhhc
Q 024375 215 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCTKL 267 (268)
Q Consensus 215 s~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~~~ 267 (268)
..+|..+-+. |+ +++..|-++. ..++ .-|+++.+ +.++...+
T Consensus 91 g~nD~~aL~~----Ad---vgia~~~~~~-~~~~---aADivl~~~~l~~i~~aI 134 (135)
T d2b8ea1 91 GINDAPALAQ----AD---LGIAVGSGSD-VAVE---SGDIVLIRDDLRDVVAAI 134 (135)
T ss_dssp SSSSHHHHHH----SS---EEEEECCC------------SEEESSCCTHHHHHHH
T ss_pred CCCcHHHHHh----CC---eeeecCccCH-HHHH---hCCEEEECCCHHHHHHHh
Confidence 9999998887 54 5666664432 1222 23577755 55554443
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.67 E-value=3.4e-05 Score=62.00 Aligned_cols=74 Identities=14% Similarity=0.178 Sum_probs=61.3
Q ss_pred HHHHHhCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhc
Q 024375 145 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 224 (268)
Q Consensus 145 ~e~L~~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~ 224 (268)
...|...|+.++++|......+....+. +++.. ...+ ..+|...+..+++++++++++++||||..+|+.+-+.
T Consensus 41 i~~l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~---~~~~--~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~ 114 (177)
T d1k1ea_ 41 IKMLMDADIQVAVLSGRDSPILRRRIAD-LGIKL---FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA 114 (177)
T ss_dssp HHHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCE---EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHhhhcEEEEEecCCchhHHHHHHhh-hcccc---cccc--cccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhh
Confidence 3444579999999999999999999996 77642 2222 2368888999999999999999999999999999988
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.28 E-value=0.00024 Score=64.83 Aligned_cols=95 Identities=18% Similarity=0.216 Sum_probs=72.4
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhc--------CCCCCCceEecCCCCC-------------------
Q 024375 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA--------GVTITPDRLYGLGTGP------------------- 190 (268)
Q Consensus 141 ypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~--------gl~~~f~~i~g~~~~p------------------- 190 (268)
=|.+..+|. +.|.++.++||.+-.+++.+++..+ .|..+||.||....||
T Consensus 187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l 266 (458)
T d2bdea1 187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTM 266 (458)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCCE
T ss_pred ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCcc
Confidence 377888887 7899999999999999999999545 5667999998643110
Q ss_pred -------cH-----HHHHHHHhcCCCCCCcEEEEcCcH-hhHHHhhccCccCCCcEEEEec
Q 024375 191 -------KV-----NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 238 (268)
Q Consensus 191 -------kp-----~~l~~~~~~l~~~~~~~~~VGDs~-~Di~aa~~~~~~agi~~i~v~w 238 (268)
++ --+..+.+-+|....+++||||+. .||..++.. .|.+|++|--
T Consensus 267 ~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~---~gWrT~~Ii~ 324 (458)
T d2bdea1 267 TNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKD---CNWRTALVVE 324 (458)
T ss_dssp EECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHH---HCSEEEEECT
T ss_pred ccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhh---cCCceEEehH
Confidence 01 023455556678778999999997 588888763 7999999953
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.22 E-value=0.00032 Score=53.00 Aligned_cols=46 Identities=20% Similarity=0.126 Sum_probs=35.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---------------hHHHHHHHHHhcCCCCCCceEec
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---------------~~~~~~~L~~~~gl~~~f~~i~g 185 (268)
+.|.+++.+.|. ++|.++.|.|+.+ ...+..-|++ +|+ .|=..+.|
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~-~gI-~Yd~Li~g 86 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-HQV-PYDEILVG 86 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-TTC-CCSEEEEC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHH-cCC-CceEEEEC
Confidence 367888888888 7999999999985 3457777886 898 45445556
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.10 E-value=0.0027 Score=50.04 Aligned_cols=112 Identities=12% Similarity=0.122 Sum_probs=73.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceE-----ecCC-------------------CCCc
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL-----YGLG-------------------TGPK 191 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i-----~g~~-------------------~~pk 191 (268)
+|-|++.++++ +.|+++.++|.-....+..+-++ .|+...-..+ .|.+ ..-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 67799999998 89999999999999999999996 9985332221 1111 0012
Q ss_pred HH---HHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecC--hhHHhh
Q 024375 192 VN---VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 265 (268)
Q Consensus 192 p~---~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~--~~~~~~ 265 (268)
|+ .+-+.+++.| ..+.||||+.+|..+=+. |+ +|+.-|-++....+. -++++.+ +..+..
T Consensus 99 p~~K~~lv~~l~~~g---~~Va~vGDG~nD~~AL~~----Ad---vGIa~~~gt~~a~~a----Adivl~~~~l~~v~~ 163 (168)
T d1wpga2 99 PSHKSKIVEYLQSYD---EITAMTGDGVNDAPALKK----AE---IGIAMGSGTAVAKTA----SEMVLADDNFSTIVA 163 (168)
T ss_dssp HHHHHHHHHHHHHTT---CCEEEEECSGGGHHHHHH----SS---EEEEETTSCHHHHHT----CSEEETTCCTHHHHH
T ss_pred hhHHHHHHHHHHhcc---cceeEEecCCCCHHHHHh----CC---EEEEeccccHHHHHh----CCEEEccCCHHHHHH
Confidence 22 2333344444 568999999999998887 44 666667544322222 2477766 555443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.80 E-value=0.00017 Score=58.01 Aligned_cols=40 Identities=15% Similarity=0.037 Sum_probs=28.7
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcC----cHhhHHHhhccCccCCCcEEEE
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGD----s~~Di~aa~~~~~~agi~~i~v 236 (268)
.|...+++++ +.++++++.||| +.||+++-++ +|...++|
T Consensus 185 sKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~----~g~~~~~v 228 (243)
T d2amya1 185 DKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTD----PRTMGYSV 228 (243)
T ss_dssp SGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHC----TTEEEEEC
T ss_pred CHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHc----cCCcEEEe
Confidence 6666666654 578899999999 6699999987 66544544
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.99 E-value=0.001 Score=53.03 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=32.5
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcH----hhHHHhhccCccCCCcEEEE
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRL----ATLKNVIKEPELDGWNLYLV 236 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~----~Di~aa~~~~~~agi~~i~v 236 (268)
.|...+..+++ .+.++++.|||+. ||+++=+. ||...++|
T Consensus 185 sKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~----a~~~~~av 228 (244)
T d2fuea1 185 DKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFAD----PRTVGHSV 228 (244)
T ss_dssp STTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHS----TTSEEEEC
T ss_pred cHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHc----CCCcEEEc
Confidence 77888888775 4788999999985 99999987 66656666
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.65 E-value=0.0016 Score=51.70 Aligned_cols=61 Identities=8% Similarity=0.071 Sum_probs=42.1
Q ss_pred CcHHHHHHHHhcCCCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhHHhhhcC
Q 024375 190 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 268 (268)
Q Consensus 190 pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~~~~~~~ 268 (268)
.|-..++.++++ +++++|||+.||+.+=+. +|. .++|.=|-. ...-++.+.+++++...||
T Consensus 159 ~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~----~~~-~~av~~g~~--------~~~A~~~~~~~~ev~~~l~ 219 (229)
T d1u02a_ 159 NKGSAIRSVRGE-----RPAIIAGDDATDEAAFEA----NDD-ALTIKVGEG--------ETHAKFHVADYIEMRKILK 219 (229)
T ss_dssp CHHHHHHHHHTT-----SCEEEEESSHHHHHHHHT----TTT-SEEEEESSS--------CCCCSEEESSHHHHHHHHH
T ss_pred CHHHHHHHHhcc-----ccceeecCCCChHHHHhc----cCC-eEEEEeCCC--------CccCeEEcCCHHHHHHHHH
Confidence 688888888754 578999999999998776 322 345544421 1233588888888766653
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.57 E-value=0.086 Score=43.78 Aligned_cols=134 Identities=9% Similarity=0.140 Sum_probs=87.1
Q ss_pred hhHHHHHhhCCCHHHHHHHHHHHHHHhhhccccccccCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCC
Q 024375 100 IKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT 177 (268)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~ 177 (268)
+.-.|+..+|++.+++.+.-+ . ...+-||+.++|+ ++-.+-+|||+.-+.+++++.+ +.|+
T Consensus 57 LIvPFl~a~Gvt~edL~~fSE----~-----------~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~-~~gf- 119 (308)
T d1y8aa1 57 LLTPFLAAAGVKNRDVERIAE----L-----------SAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTAS-MIGV- 119 (308)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH----H-----------HCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHH-HTTC-
T ss_pred hHHHHHHHhCCCHHHHHHHhh----h-----------ceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHh-hcCC-
Confidence 344677888998887543321 1 2467899999999 7789999999999999999999 4887
Q ss_pred CCCceEecCCC----C--C-------------------------------------------------cHHHHHHHHhcC
Q 024375 178 ITPDRLYGLGT----G--P-------------------------------------------------KVNVLKQLQKKP 202 (268)
Q Consensus 178 ~~f~~i~g~~~----~--p-------------------------------------------------kp~~l~~~~~~l 202 (268)
++. +++.+. - | |..++...++..
T Consensus 120 -p~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~ 197 (308)
T d1y8aa1 120 -RGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESK 197 (308)
T ss_dssp -CSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHH
T ss_pred -Cce-eecccccccccCCChHHHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccc
Confidence 333 443220 0 1 122344445555
Q ss_pred CCCCCcEEEEcCcHhhHHHhhccCccCCCcEEEEecCCCCHHHHHhcCCCCCeeecChhH
Q 024375 203 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 262 (268)
Q Consensus 203 ~~~~~~~~~VGDs~~Di~aa~~~~~~agi~~i~v~wGy~~~~el~~~~~~P~~~~~~~~~ 262 (268)
++.+. +|||||.+|+++-+.+.. -.-++|++- |+.-.++.+ +..+-++..
T Consensus 198 ~~~~~--~~VGDSITDve~Lr~~r~---~gGlaIsFN-GN~Yal~eA----~VaiiS~~~ 247 (308)
T d1y8aa1 198 GIDFP--VVVGDSISDYKMFEAARG---LGGVAIAFN-GNEYALKHA----DVVIISPTA 247 (308)
T ss_dssp TCSSC--EEEECSGGGHHHHHHHHH---TTCEEEEES-CCHHHHTTC----SEEEECSST
T ss_pred cCCcc--eeccCccccHHHHHHHhc---CCCeeEEec-Ccccccccc----ceEEeccch
Confidence 56554 999999999988776432 223667665 444456544 355545443
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.26 E-value=0.0054 Score=48.64 Aligned_cols=82 Identities=9% Similarity=-0.055 Sum_probs=60.5
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEecCCCC--CcHHHHHHHHhcCCCCCCcEEEEc
Q 024375 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 213 (268)
Q Consensus 138 ~~lypGv~e~L~--~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g~~~~--pkp~~l~~~~~~l~~~~~~~~~VG 213 (268)
+.+=||+.++|+ .+.+.++|-|+-.+++|+.+++. +.....|......+.. .+.. ..+-++.+|-+.+++++|.
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~-ldp~~~~~~~~~r~~c~~~~~~-~~KdL~~l~~~l~~vvivD 131 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGN-YVKDLSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCSSCCEEEEECGGGSEEETTE-EECCGGGSCSCGGGEEEEC
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHH-hccCCceeEEEEeeeeeecCCc-ccccHhhcCCCHHHeEEEc
Confidence 345699999999 78899999999999999999996 8777666655544321 1110 1123556777888999999
Q ss_pred CcHhhHHH
Q 024375 214 DRLATLKN 221 (268)
Q Consensus 214 Ds~~Di~a 221 (268)
|+..-...
T Consensus 132 d~~~~~~~ 139 (181)
T d1ta0a_ 132 NSPASYVF 139 (181)
T ss_dssp SCGGGGTT
T ss_pred CChhhhhc
Confidence 99886654
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=91.96 E-value=0.025 Score=41.90 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=31.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhcCCCCCCceE
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRL 183 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~---~~~~L~~~~gl~~~f~~i 183 (268)
.|+|++.+.|+ ++|.++.|.|+.+... +..-|++ .|+. |+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~-~~i~--yd~i 68 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGLE--FYAA 68 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC--CSEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHH-cCCC--ceeh
Confidence 46788888888 7999999999998765 4455664 6663 4555
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=89.90 E-value=0.26 Score=38.02 Aligned_cols=13 Identities=38% Similarity=0.736 Sum_probs=11.8
Q ss_pred cEEEEecCccccc
Q 024375 3 DLYALDFDGVICD 15 (268)
Q Consensus 3 ~~vlFDlDGTLvD 15 (268)
.+|+||+||||++
T Consensus 1 ~Li~~DlDGTL~~ 13 (229)
T d1u02a_ 1 SLIFLDYDGTLVP 13 (229)
T ss_dssp CEEEEECBTTTBC
T ss_pred CEEEEEecCCCCC
Confidence 4799999999997
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=86.80 E-value=0.12 Score=40.34 Aligned_cols=70 Identities=14% Similarity=0.151 Sum_probs=37.1
Q ss_pred CccHHHHHHhCCCcEEEEcCCch-HHHHHHHHHhcCCCCCCceEecCCCCCcHHHHHHHHhcCCCCCCcEEEEcCcHhhH
Q 024375 141 YPGVSDALKLASSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 219 (268)
Q Consensus 141 ypGv~e~L~~~g~~l~IvTnK~~-~~~~~~L~~~~gl~~~f~~i~g~~~~pkp~~l~~~~~~l~~~~~~~~~VGDs~~Di 219 (268)
.+-+....++.++.......++. ...+.++++ +|+..---..+|.+ -++-+++ +..++. +-++|+...+
T Consensus 59 ~~~v~~~~~~l~~~~~~~~~~~K~~~l~~~~~~-~~i~~~~v~~vGDd-~nDl~~l----~~~g~s----iap~nA~~~v 128 (177)
T d1k1ea_ 59 SPILRRRIADLGIKLFFLGKLEKETACFDLMKQ-AGVTAEQTAYIGDD-SVDLPAF----AACGTS----FAVADAPIYV 128 (177)
T ss_dssp CHHHHHHHHHHTCCEEEESCSCHHHHHHHHHHH-HTCCGGGEEEEECS-GGGHHHH----HHSSEE----EECTTSCHHH
T ss_pred hhHHHHHHhhhcccccccccccHHHHHHHHHHH-hcCCcceeEEecCC-ccHHHHH----hhCCeE----EEcCCccHHH
Confidence 34444444445555444443333 445677775 88875433334543 2444444 334544 7788887666
Q ss_pred H
Q 024375 220 K 220 (268)
Q Consensus 220 ~ 220 (268)
.
T Consensus 129 k 129 (177)
T d1k1ea_ 129 K 129 (177)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=86.60 E-value=0.38 Score=38.49 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=39.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhcCCCCCCceEec
Q 024375 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 139 ~lypGv~e~L~---~~g~~l~IvTnK~~~~~~~~L~~~~gl~~~f~~i~g 185 (268)
.+-|.+.++|+ ++|++++|+|+++...+..+++. +++...+..+++
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~-l~l~~~~~~~i~ 69 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCIT 69 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHH-TTCCSTTCEEEE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-hcCcCCCcEEEE
Confidence 45688888888 79999999999999999999996 999887777664
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=86.38 E-value=0.1 Score=41.74 Aligned_cols=14 Identities=36% Similarity=0.297 Sum_probs=12.3
Q ss_pred cEEEEecCcccccC
Q 024375 3 DLYALDFDGVICDS 16 (268)
Q Consensus 3 ~~vlFDlDGTLvDS 16 (268)
++|+||+||||+..
T Consensus 24 ~Aif~DrDGtl~~~ 37 (209)
T d2o2xa1 24 PALFLDRDGTINVD 37 (209)
T ss_dssp CCEEECSBTTTBCC
T ss_pred CEEEEeCCCCeECC
Confidence 68999999999874
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.80 E-value=0.34 Score=37.36 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=21.6
Q ss_pred EEEEecCcccccChhHHHHHHHHHHHHh
Q 024375 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (268)
Q Consensus 4 ~vlFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (268)
+++||+||||+|+-..+-.....+++++
T Consensus 3 i~lFDlDGTLl~~~~~is~~~~~~i~~l 30 (244)
T d2fuea1 3 LCLFDVDGTLTPARQKIDPEVAAFLQKL 30 (244)
T ss_dssp EEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred EEEEccccCccCCCCcCCHHHHHHHHHH
Confidence 4568999999998876666666667666
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=83.69 E-value=0.4 Score=41.46 Aligned_cols=24 Identities=25% Similarity=0.257 Sum_probs=19.4
Q ss_pred cEEEEecCcccccChhHHHHHHHH
Q 024375 3 DLYALDFDGVICDSCEETALSAVK 26 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~~~i~~s~~~ 26 (268)
+.|+||.||+|+|.-.-+=.|...
T Consensus 2 ~~i~fd~dGVll~~~~~~D~s~lt 25 (380)
T d1qyia_ 2 KKILFDVDGVFLSEERCFDVSALT 25 (380)
T ss_dssp CEEEECSBTTTBCSHHHHHHHHHH
T ss_pred ceEEEeCCcEEEcceeecchHhhh
Confidence 789999999999998866555433
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.17 E-value=0.2 Score=38.99 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=13.4
Q ss_pred cEEEEecCcccccCh
Q 024375 3 DLYALDFDGVICDSC 17 (268)
Q Consensus 3 ~~vlFDlDGTLvDS~ 17 (268)
.++++|||+||+.|.
T Consensus 16 ~~LVLDLDeTLihs~ 30 (181)
T d1ta0a_ 16 ICVVIDLDETLVHSS 30 (181)
T ss_dssp CEEEECCBTTTEEEE
T ss_pred eEEEEeCCCCEEccc
Confidence 589999999999984
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=81.06 E-value=0.9 Score=36.20 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=35.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhcCCCCCCceEec
Q 024375 138 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYG 185 (268)
Q Consensus 138 ~~lypGv~e~L~---~~g~~l~IvTnK~---~~~~~~~L~~~~gl~~~f~~i~g 185 (268)
..++|++.+.|+ ++|+++.++||.+ ++...+.|++ +|++...+.|+.
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~-~G~~~~~~~i~~ 70 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYT 70 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHH-TTCCCCGGGEEE
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhh-ccccccceeEec
Confidence 467899999988 8999999999865 4445555665 888766566654
|