Citrus Sinensis ID: 024414

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MVRIISMASSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKVL
Secondary Structure (PSIPRED)
cEEEEEcccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccEEEccccHHHcccHHcccccEEEEEEEEEEccHHHHHHHHHHccccEEEEEEccccccEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEccHHHHHHHHHHcccEEEcccccccccccEEEEEEcccccEEEEEEcccccccHHHHHHccccHHHHHHHHHHHHccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccHHcccccccccccccccccccEEEEccccccccccccccccccccccccccccHHHcccccccccccccHHHHHHHccHccccEEEHEEEcccHHHHHHHHHHHHcHHHHEccccccccEEEEEEEcccccccEEEEEEEEcccccccccccEEEEEEEcHHHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccHHEEEEEcccHHHHHHHHHHHHccHEEEcccccccccc
Coil and Loop (DISEMBL)
MVRIISMassirpslstfrfssssrfglplssftpsrnlvfsplasavpqsqlfglraakplrgdvnstgvassagnaaqASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMkllrkrdipeekytnaflgygpedsHFVIELTynygvdkydigtgfghfgiavDDVAKTVELIKAkggkvtrepgpvkggntviafiedpdgykfellergptpeplcQVMLRVGDLDRSINFYEQAFGMELlrkrdnpeykvl
Flexible Loop (DISEMBL)
mvriismassirpslstfrfssssrFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEwvkkdkrrMLHVVyrvgdldrtikFYTECLgmkllrkrdipeEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKakggkvtrepgpvkggntvIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAfgmellrkrdnpeykvl
Low Complexity Region (SEG)
MVRIISMASSIrpslstfrfssssrfglplssfTPSRNLVFSPLASAVPQSQLFGLRAAKPLRGDVNSTGVassagnaaqastsaahesaLEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKVL
Disordered region (IsUnstruct)
**************************************LVF*************************************************LEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELL***********
Disordered Region (DISOPRED)
********SSI**************************NLVFSPLASAVPQSQLF***********************************ALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRD****KVL
Disordered Region (DISEMBL)
MVRIISMASSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAAKPLRGDVNS*********************ALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKVL
Disordered Region (DISPRO)
*V*******SI**********SSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGL*******************************ESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVRIISMASSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	268	2.2.26 [Sep-21-2011]
Q8W593	350	Probable lactoylglutathio	yes	no	0.944	0.722	0.797	1e-114
Q948T6	291	Lactoylglutathione lyase	no	no	0.705	0.649	0.736	3e-81
Q39366	282	Putative lactoylglutathio	N/A	no	0.667	0.634	0.728	9e-81
P0AC83	135	Lactoylglutathione lyase	yes	no	0.466	0.925	0.632	2e-42
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.466	0.925	0.632	2e-42
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.466	0.925	0.632	2e-42
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.462	0.918	0.612	2e-41
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.462	0.918	0.612	2e-41
P44638	135	Lactoylglutathione lyase	yes	no	0.492	0.977	0.606	6e-41
Q55595	131	Probable lactoylglutathio	N/A	no	0.458	0.938	0.585	2e-39

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  412 bits (1058), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/267 (79%), Positives = 223/267 (83%), Gaps = 14/267 (5%)

Query: 1   MVRIISMA-SSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRII MA SSIRPSL+ F  S S RF + L S   SR L        VPQSQLFGL + 
Sbjct: 1   MVRIIPMAASSIRPSLACF--SDSPRFPISLLSRNLSRTL-------HVPQSQLFGLTSH 51

Query: 60  KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYT 119
           K LR  VN  GVA S G AAQA+T    +  L WVK DKRRMLHVVYRVGD+DRTIKFYT
Sbjct: 52  KLLRRSVNCLGVAES-GKAAQATT---QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYT 107

Query: 120 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD 179
           ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG GFGHFGIAVDD
Sbjct: 108 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDD 167

Query: 180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 239
           VAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG
Sbjct: 168 VAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 227

Query: 240 DLDRSINFYEQAFGMELLRKRDNPEYK 266
           DLDR+I FYE+AFGMELLR RDNPEYK
Sbjct: 228 DLDRAIKFYEKAFGMELLRTRDNPEYK 254

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  301 bits (772), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 140/190 (73%), Positives = 161/190 (84%), Gaps = 1/190 (0%)

Query: 78  AAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 137
           A+ +    + E  LEW KKDK+R+LH VYRVGDLDRTIK YTEC GMKLLRKRD+PEEKY
Sbjct: 2   ASGSEAEKSPEVVLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKY 61

Query: 138 TNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAK-GGKVTR 196
           TNAFLG+GPED++F +ELTYNYGVDKYDIG GFGHF IA +DV K  E IK+    K+TR
Sbjct: 62  TNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITR 121

Query: 197 EPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 256
           EPGPVKGG+TVIAF +DPDGY FEL++RGPTPEPLCQVMLRVGDLDRSI FYE+A GM+L
Sbjct: 122 EPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKL 181

Query: 257 LRKRDNPEYK 266
           LRK+D P+YK
Sbjct: 182 LRKKDVPDYK 191

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  300 bits (767), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 134/184 (72%), Positives = 158/184 (85%)

Query: 85  AAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY 144
           A +   +EW KKDKRR LHVVYRVGDLDRTI+FYTEC GMK+LRKRD+PEEKY+NAFLG+
Sbjct: 2   AENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGF 61

Query: 145 GPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGG 204
           GPE S+FV+ELTYNYGV  YDIGTGFGHF I+  DV+K VE ++AKGG VTREPGPVKGG
Sbjct: 62  GPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGG 121

Query: 205 NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE 264
            +VIAF++DPDGY FEL++RGPTPEPLCQVMLRVGDLDR++ F E+A GM LLR+ + PE
Sbjct: 122 GSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPE 181

Query: 265 YKVL 268
           Y  +
Sbjct: 182 YNTI 185

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 220 ELLER 224
           EL+E 
Sbjct: 122 ELIEE 126

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 220 ELLER 224
           EL+E 
Sbjct: 122 ELIEE 126

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 97/125 (77%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 220 ELLER 224
           EL+E 
Sbjct: 122 ELIEE 126

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 95/124 (76%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GV+ YD+G  +GH  ++VD+ A+  E I+  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 220 ELLE 223
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/124 (61%), Positives = 95/124 (76%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GV+ YD+G  +GH  ++VD+ A+  E I+  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 220 ELLE 223
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  167 bits (424), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 80/132 (60%), Positives = 97/132 (73%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           ++LH + RVGDLDR+IKFY + LGM+LLR  + PE KYT AFLGY   +S   IELTYN+
Sbjct: 2   QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GVDKY+ GT +GH  I VDD+  T E ++A GG VTRE GPVKGG+TVIAF+EDPDGYK 
Sbjct: 62  GVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKI 121

Query: 220 ELLERGPTPEPL 231
           E +E   T   L
Sbjct: 122 EFIENKSTKSGL 133

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q55595|LGUL_SYNY3 Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gloA PE=3 SV=1

 Score =  162 bits (411), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 96/123 (78%)

Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 160
           +LH + RVGDLD++++FY + LGM LLRK+D P  ++T AF+GYG E  + VIELT+N+G
Sbjct: 3   LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWG 62

Query: 161 VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 220
            DKYD+G GFGH  + V+D+  T + I+ KGGKV REPGP+K G TVIAF+EDPDGYK E
Sbjct: 63  TDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIE 122

Query: 221 LLE 223
           L++
Sbjct: 123 LIQ 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
359484559	362	PREDICTED: probable lactoylglutathione l	0.992	0.734	0.819	1e-125
225445150	355	PREDICTED: probable lactoylglutathione l	0.966	0.729	0.815	1e-123
449443163	362	PREDICTED: probable lactoylglutathione l	0.988	0.732	0.794	1e-115
449530241	354	PREDICTED: probable lactoylglutathione l	0.988	0.748	0.794	1e-115
297841409	353	hypothetical protein ARALYDRAFT_475823 [	0.955	0.725	0.805	1e-114
255546389	369	lactoylglutathione lyase, putative [Rici	0.955	0.693	0.779	1e-114
224119744	355	predicted protein [Populus trichocarpa]	0.951	0.718	0.787	1e-113
15220397	350	putative lactoylglutathione lyase, chlor	0.944	0.722	0.797	1e-112
21537360	350	glyoxalase I, putative [Arabidopsis thal	0.944	0.722	0.794	1e-112
9828630	357	F1N21.10 [Arabidopsis thaliana]	0.944	0.708	0.777	1e-110

>gi|359484559|ref|XP_003633121.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 2 [Vitis vinifera] gi|297738782|emb|CBI28027.3| unnamed protein product [Vitis vinifera]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/266 (81%), Positives = 237/266 (89%)

Query: 1   MVRIISMASSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAAK 60
           MVRII MA+S RPSLS+F FS+SSR G PLS+F  SR +    + SA+PQSQ+FGL A+K
Sbjct: 1   MVRIIPMATSFRPSLSSFGFSTSSRLGFPLSTFNISRTVTSLHVGSAIPQSQIFGLNASK 60

Query: 61  PLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTE 120
            LRG   +    ++ GN A ASTSAA E+ LEWVKKDKRRMLHVVYRVGDLDRTIKFYTE
Sbjct: 61  LLRGGEGNAMGFNATGNIAHASTSAAQENVLEWVKKDKRRMLHVVYRVGDLDRTIKFYTE 120

Query: 121 CLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV 180
           CLGMKLLR+RDIPEE+YTNAFLGYGPEDSHFVIELTYNYGVDKYDIG GFGHFGIAV+DV
Sbjct: 121 CLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVEDV 180

Query: 181 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGD 240
            KTV+LIKAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGD
Sbjct: 181 TKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGD 240

Query: 241 LDRSINFYEQAFGMELLRKRDNPEYK 266
           LDRSINFYE+AFGMELLRKRDNPEYK
Sbjct: 241 LDRSINFYEKAFGMELLRKRDNPEYK 266

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445150|ref|XP_002284023.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 1 [Vitis vinifera]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 217/266 (81%), Positives = 235/266 (88%), Gaps = 7/266 (2%)

Query: 1   MVRIISMASSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAAK 60
           MVRII MA+S RPSLS+F FS+SSR G PLS+F  SR L       ++PQSQ+FGL A+K
Sbjct: 1   MVRIIPMATSFRPSLSSFGFSTSSRLGFPLSTFNISRTL-------SIPQSQIFGLNASK 53

Query: 61  PLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTE 120
            LRG   +    ++ GN A ASTSAA E+ LEWVKKDKRRMLHVVYRVGDLDRTIKFYTE
Sbjct: 54  LLRGGEGNAMGFNATGNIAHASTSAAQENVLEWVKKDKRRMLHVVYRVGDLDRTIKFYTE 113

Query: 121 CLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV 180
           CLGMKLLR+RDIPEE+YTNAFLGYGPEDSHFVIELTYNYGVDKYDIG GFGHFGIAV+DV
Sbjct: 114 CLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVEDV 173

Query: 181 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGD 240
            KTV+LIKAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGD
Sbjct: 174 TKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGD 233

Query: 241 LDRSINFYEQAFGMELLRKRDNPEYK 266
           LDRSINFYE+AFGMELLRKRDNPEYK
Sbjct: 234 LDRSINFYEKAFGMELLRKRDNPEYK 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443163|ref|XP_004139350.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/267 (79%), Positives = 237/267 (88%), Gaps = 2/267 (0%)

Query: 1   MVRIISMAS-SIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRI  MAS S+RPSLS FRF+  SR GL LSSF  +R +    L SAVPQSQ FGL+A 
Sbjct: 1   MVRITPMASFSVRPSLSAFRFAGFSRSGLSLSSFNTTRRIALLQLGSAVPQSQYFGLKAF 60

Query: 60  KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYT 119
             LRG+ ++ G+ + AGNAAQASTS++ E+ L+WVK+DKRRMLHVVYRVGDLD+TIKFYT
Sbjct: 61  DMLRGEGSNIGM-TVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVYRVGDLDKTIKFYT 119

Query: 120 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD 179
           ECLGMKLLRKRDIPEEKYTNAFLG+GPEDSHFVIELTYNYGVDKYDIGT FGHFGIAV+D
Sbjct: 120 ECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVED 179

Query: 180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 239
           V KTVELIKAKGGKVTRE GPVKGG TVIAF+EDPDGYKFEL+ERGPTPEPLCQVMLRVG
Sbjct: 180 VYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYKFELIERGPTPEPLCQVMLRVG 239

Query: 240 DLDRSINFYEQAFGMELLRKRDNPEYK 266
           DLDRSI+FY++A+GMELLRKRDNP+YK
Sbjct: 240 DLDRSIDFYKKAYGMELLRKRDNPDYK 266

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530241|ref|XP_004172104.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/267 (79%), Positives = 237/267 (88%), Gaps = 2/267 (0%)

Query: 1   MVRIISMAS-SIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRI  MAS S+RPSLS FRF+  SR GL LSSF  +R +    L SAVPQSQ FGL+A 
Sbjct: 1   MVRITPMASFSVRPSLSAFRFAGFSRSGLSLSSFNTTRRIALLQLGSAVPQSQYFGLKAF 60

Query: 60  KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYT 119
             LRG+ ++ G+ + AGNAAQASTS++ E+ L+WVK+DKRRMLHVVYRVGDLD+TIKFYT
Sbjct: 61  DMLRGEGSNIGM-TVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVYRVGDLDKTIKFYT 119

Query: 120 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD 179
           ECLGMKLLRKRDIPEEKYTNAFLG+GPEDSHFVIELTYNYGVDKYDIGT FGHFGIAV+D
Sbjct: 120 ECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVED 179

Query: 180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 239
           V KTVELIKAKGGKVTRE GPVKGG TVIAF+EDPDGYKFEL+ERGPTPEPLCQVMLRVG
Sbjct: 180 VYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYKFELIERGPTPEPLCQVMLRVG 239

Query: 240 DLDRSINFYEQAFGMELLRKRDNPEYK 266
           DLDRSI+FY++A+GMELLRKRDNP+YK
Sbjct: 240 DLDRSIDFYKKAYGMELLRKRDNPDYK 266

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841409|ref|XP_002888586.1| hypothetical protein ARALYDRAFT_475823 [Arabidopsis lyrata subsp. lyrata] gi|297334427|gb|EFH64845.1| hypothetical protein ARALYDRAFT_475823 [Arabidopsis lyrata subsp. lyrata]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/267 (80%), Positives = 223/267 (83%), Gaps = 11/267 (4%)

Query: 1   MVRIISMA-SSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRII MA SSIRPSL+    SSS RF + L S   SR L        VPQSQLFGL + 
Sbjct: 1   MVRIIPMAASSIRPSLTCL--SSSPRFPISLFSRNLSRTL-------HVPQSQLFGLNSH 51

Query: 60  KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYT 119
           K LR  VN  GVA S G  AQAST+ A +  L WVK DKRRMLHVVYRVGDLDRTIKFYT
Sbjct: 52  KLLRRSVNCLGVAES-GKPAQASTATAQDDLLTWVKNDKRRMLHVVYRVGDLDRTIKFYT 110

Query: 120 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD 179
           ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG GFGHFGIAVDD
Sbjct: 111 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDD 170

Query: 180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 239
           VAKTVEL+KAKGGKV REPGPVKGG TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG
Sbjct: 171 VAKTVELVKAKGGKVAREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 230

Query: 240 DLDRSINFYEQAFGMELLRKRDNPEYK 266
           DLDR+I FYE+AFGMELLR RDNPEYK
Sbjct: 231 DLDRAIKFYEKAFGMELLRTRDNPEYK 257

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546389|ref|XP_002514254.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223546710|gb|EEF48208.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/277 (77%), Positives = 235/277 (84%), Gaps = 21/277 (7%)

Query: 7   MASSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLV------------FSPLASAVPQSQLF 54
           MASSIRPSLS+FR  +S+    PLSS + S +              F+ L SAVPQS  F
Sbjct: 1   MASSIRPSLSSFRLCNSTG---PLSSSSSSSSSSVSVFPCSSSSRRFTYLGSAVPQSHFF 57

Query: 55  GLRA-AKPLRGDVNST----GVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVG 109
           GL+A +KP RG+++++    GVA++ GN AQAST A+ ESALEW K DKRRMLHVVYRVG
Sbjct: 58  GLKATSKPWRGEISTSSSGLGVAAT-GNMAQASTFASQESALEWAKSDKRRMLHVVYRVG 116

Query: 110 DLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG 169
           DLDRTIKFYTECLGMKLLRKRDIPEE+YTNAFLGYGPEDSHFVIELTYNYGVDKYDIGT 
Sbjct: 117 DLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTA 176

Query: 170 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE 229
           FGHFGIAV+DVAKTVELIKAKGGKVTREP PVKGG TVIAFIEDPDGYKFELLERGPTPE
Sbjct: 177 FGHFGIAVEDVAKTVELIKAKGGKVTREPAPVKGGKTVIAFIEDPDGYKFELLERGPTPE 236

Query: 230 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           PLCQVMLRVGDLDRSINFYE+AFGMELLRKRDNPEYK
Sbjct: 237 PLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYK 273

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119744|ref|XP_002331150.1| predicted protein [Populus trichocarpa] gi|222873233|gb|EEF10364.1| predicted protein [Populus trichocarpa]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/268 (78%), Positives = 229/268 (85%), Gaps = 13/268 (4%)

Query: 1   MVRIISM-ASSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRII M +SSIRPS  ++   SS  F    ++  PSR   F+ LA+AVPQS  FGL+A+
Sbjct: 1   MVRIIPMVSSSIRPS--SYLTCSSFMF---CNACAPSRR--FAYLATAVPQSHFFGLKAS 53

Query: 60  -KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFY 118
            K  RG+  +     + GN AQAST+A  ES LEWVKKDKRRMLHVVYRVGDLDRTIKFY
Sbjct: 54  SKIWRGESRTI----ATGNMAQASTAATQESLLEWVKKDKRRMLHVVYRVGDLDRTIKFY 109

Query: 119 TECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD 178
           TECLGMKLLRKRDIPEE+YTNAFLGYGPEDSHFVIELTYNYGVD YDIG GFGHFGIAV+
Sbjct: 110 TECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDSYDIGAGFGHFGIAVE 169

Query: 179 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRV 238
           DVAKTVELIKAKGGKV REPGPVKGG+TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRV
Sbjct: 170 DVAKTVELIKAKGGKVNREPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRV 229

Query: 239 GDLDRSINFYEQAFGMELLRKRDNPEYK 266
           GDLDRSINFYE+AFGM+LLRKRDNPEYK
Sbjct: 230 GDLDRSINFYEKAFGMKLLRKRDNPEYK 257

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220397|ref|NP_176896.1| putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana] gi|75162595|sp|Q8W593.1|LGUC_ARATH RecName: Full=Probable lactoylglutathione lyase, chloroplast; AltName: Full=Glyoxalase I; Flags: Precursor gi|16930396|gb|AAL31884.1|AF419551_1 At1g67280/F1N21_10 [Arabidopsis thaliana] gi|19310505|gb|AAL84986.1| At1g67280/F1N21_10 [Arabidopsis thaliana] gi|332196500|gb|AEE34621.1| putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/267 (79%), Positives = 223/267 (83%), Gaps = 14/267 (5%)

Query: 1   MVRIISMA-SSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRII MA SSIRPSL+ F  S S RF + L S   SR L        VPQSQLFGL + 
Sbjct: 1   MVRIIPMAASSIRPSLACF--SDSPRFPISLLSRNLSRTL-------HVPQSQLFGLTSH 51

Query: 60  KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYT 119
           K LR  VN  GVA S G AAQA+T    +  L WVK DKRRMLHVVYRVGD+DRTIKFYT
Sbjct: 52  KLLRRSVNCLGVAES-GKAAQATT---QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYT 107

Query: 120 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD 179
           ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG GFGHFGIAVDD
Sbjct: 108 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDD 167

Query: 180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 239
           VAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG
Sbjct: 168 VAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 227

Query: 240 DLDRSINFYEQAFGMELLRKRDNPEYK 266
           DLDR+I FYE+AFGMELLR RDNPEYK
Sbjct: 228 DLDRAIKFYEKAFGMELLRTRDNPEYK 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537360|gb|AAM61701.1| glyoxalase I, putative [Arabidopsis thaliana]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/267 (79%), Positives = 223/267 (83%), Gaps = 14/267 (5%)

Query: 1   MVRIISMA-SSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRII MA SSIRPSL+ F  S S RF + L S   SR L        VPQSQLFGL + 
Sbjct: 1   MVRIIPMAASSIRPSLACF--SDSPRFPISLLSRNLSRTL-------HVPQSQLFGLTSH 51

Query: 60  KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYT 119
           K LR  VN  GVA S G AAQ++T    +  L WVK DKRRMLHVVYRVGD+DRTIKFYT
Sbjct: 52  KLLRRSVNCLGVAES-GKAAQSTT---QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYT 107

Query: 120 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD 179
           ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG GFGHFGIAVDD
Sbjct: 108 ECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDD 167

Query: 180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 239
           VAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG
Sbjct: 168 VAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVG 227

Query: 240 DLDRSINFYEQAFGMELLRKRDNPEYK 266
           DLDR+I FYE+AFGMELLR RDNPEYK
Sbjct: 228 DLDRAIKFYEKAFGMELLRTRDNPEYK 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9828630|gb|AAG00253.1|AC002130_18 F1N21.10 [Arabidopsis thaliana]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/274 (77%), Positives = 223/274 (81%), Gaps = 21/274 (7%)

Query: 1   MVRIISMA-SSIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQSQLFGLRAA 59
           MVRII MA SSIRPSL+ F  S S RF + L S   SR L        VPQSQLFGL + 
Sbjct: 1   MVRIIPMAASSIRPSLACF--SDSPRFPISLLSRNLSRTL-------HVPQSQLFGLTSH 51

Query: 60  KPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIK--- 116
           K LR  VN  GVA S G AAQA+T    +  L WVK DKRRMLHVVYRVGD+DRTIK   
Sbjct: 52  KLLRRSVNCLGVAES-GKAAQATT---QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKYFT 107

Query: 117 ----FYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH 172
               FYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG GFGH
Sbjct: 108 LAFLFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGH 167

Query: 173 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLC 232
           FGIAVDDVAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFELLERGPTPEPLC
Sbjct: 168 FGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLC 227

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           QVMLRVGDLDR+I FYE+AFGMELLR RDNPEYK
Sbjct: 228 QVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 261

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.802	0.614	0.826	2.3e-94
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.462	0.918	0.637	1.6e-40
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.462	0.911	0.604	1.9e-37
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.462	0.898	0.604	4.9e-37
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.462	0.898	0.604	4.9e-37
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.462	0.911	0.6	4.9e-37
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.597	0.536	0.346	1.3e-22
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.597	0.536	0.318	6.3e-21
UNIPROTKB|Q9HC38	313	GLOD4 "Glyoxalase domain-conta	0.458	0.392	0.358	7.6e-21
MGI|MGI:1914451	298	Glod4 "glyoxalase domain conta	0.593	0.533	0.340	4.4e-20

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 181/219 (82%), Positives = 187/219 (85%)

Query:    48 VPQSQLFGLRAAKPLRGDVNSTGVXXXXXXXXXXXXXXXXXXXLEWVKKDKRRMLHVVYR 107
             VPQSQLFGL + K LR  VN  GV                   L WVK DKRRMLHVVYR
Sbjct:    40 VPQSQLFGLTSHKLLRRSVNCLGVAESGKAAQATTQDDL----LTWVKNDKRRMLHVVYR 95

Query:   108 VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG 167
             VGD+DRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG
Sbjct:    96 VGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG 155

Query:   168 TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT 227
              GFGHFGIAVDDVAKTVEL+KAKGGKV+REPGPVKGG TVIAFIEDPDGYKFELLERGPT
Sbjct:   156 AGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIEDPDGYKFELLERGPT 215

Query:   228 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
             PEPLCQVMLRVGDLDR+I FYE+AFGMELLR RDNPEYK
Sbjct:   216 PEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 254

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 79/124 (63%), Positives = 97/124 (78%)

Query:   100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
             R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:   160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
             GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   220 ELLE 223
             EL+E
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 75/124 (60%), Positives = 96/124 (77%)

Query:   100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
             R+LH + RVG+L+++++FY + LGMKLLRK +  E KYT AF+GY  ED + VIELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:   160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
             GV+KY++GT FGH  I VDDV +TVE I+  GGKV RE  PV GG TVIAF+EDPD YK 
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   220 ELLE 223
             EL++
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 75/124 (60%), Positives = 92/124 (74%)

Query:   100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
             R+LH + RVGDLD++I+FYT+ +GM LLRK +  E KYT AFLGYG E    VIELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
             GV  Y+ G  +GH  I VDD+  T + IKA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   220 ELLE 223
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 75/124 (60%), Positives = 92/124 (74%)

Query:   100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
             R+LH + RVGDLD++I+FYT+ +GM LLRK +  E KYT AFLGYG E    VIELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
             GV  Y+ G  +GH  I VDD+  T + IKA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   220 ELLE 223
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 75/125 (60%), Positives = 93/125 (74%)

Query:   100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS-HFVIELTYN 158
             ++LH + RVG+L+R+I FYT+ LGMKLLR  + PE KY+ AF+GYG E +   VIELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:   159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
             +G +KYD+GTGFGH  I  DD+    E I A GGKVTR PGPV GG T IAF+EDPDGYK
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   219 FELLE 223
              E ++
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 63/182 (34%), Positives = 99/182 (54%)

Query:    99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPE 147
             +R LH V++VGD  +T  FY + LGMK+LR  +  E            K++   +G+GPE
Sbjct:     4 KRALHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPE 63

Query:   148 DSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 207
             D HFV ELTYNYGV +Y +G  F   G+ +   A+ V    AK     R   P+      
Sbjct:    64 DDHFVAELTYNYGVGEYRLGNDF--LGLTLQS-AQAVS--NAK-----RLNWPLTQVGDC 113

Query:   208 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
             +   E P GY+F L+++  P  +P+ +V L V DL RS++++    GM+++ K ++ +  
Sbjct:   114 LYMTEAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKVIEKNEDKKIA 173

Query:   267 VL 268
             V+
Sbjct:   174 VM 175

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 58/182 (31%), Positives = 95/182 (52%)

Query:    99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPE 147
             RR LH V++VG+  +T+ F+ + LGM++LR  +  E            K++   +G+GPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:   148 DSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 207
             D HFV ELTYNYG+  Y +G  F    +A          ++    KV       +G    
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLASSQAVSNARRLEWPLSKVA------EG---- 113

Query:   208 IAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
             +   E P GYKF L +R P+  +P+ +V L V DL +S+N++    GM++  + +  ++ 
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKWA 173

Query:   267 VL 268
             +L
Sbjct:   174 LL 175

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|Q9HC38 GLOD4 "Glyoxalase domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 188 (71.2 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
 Identities = 48/134 (35%), Positives = 71/134 (52%)

Query:   136 KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVT 195
             K++   +G+GPED HFV ELTYNYGV  Y +G  F   GI +   A +  +  A+  K+ 
Sbjct:    67 KWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDF--MGITL---ASSQAVSNAR--KLE 119

Query:   196 REPGPVKGGNTVIAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRSINFYEQAFGM 254
                  V  G   +   E P GYKF L  R  P  +P+ +V L V DL +S+N++    GM
Sbjct:   120 WPLTEVAEG---VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGM 176

Query:   255 ELLRKRDNPEYKVL 268
             ++  K +  +  +L
Sbjct:   177 KIYEKDEEKQRALL 190

GO:0005739 "mitochondrion" evidence=IEA

MGI|MGI:1914451 Glod4 "glyoxalase domain containing 4" [Mus musculus (taxid:10090)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 62/182 (34%), Positives = 98/182 (53%)

Query:    99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPE 147
             RR LH V++V +  +T+ F+ + LGM++LR  +  E            K++   +G+GPE
Sbjct:     4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:   148 DSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 207
             D HFV ELTYNYG+  Y +G  F   GI +   A +  +  A+  K+      V  G   
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDF--MGITL---ASSQAVSNAR--KLEWPLSKVAEG--- 113

Query:   208 IAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
             I   E P GYKF L +R P+  +P+ +V L V DL +S+N++    GM++  ++D  + +
Sbjct:   114 IFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIY-EQDEEKQR 172

Query:   267 VL 268
              L
Sbjct:   173 AL 174

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.7977	0.9440	0.7228	yes	no
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.7282	0.6679	0.6347	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.824
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh2_kg.2__953__AT1G67280.1	annotation not avaliable (353 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	scaffold_301249.1	annotation not avaliable (258 aa)						•	•		0.418

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	268
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	1e-147
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-91
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	5e-63
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-52
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	3e-48
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-32
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	1e-29
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	2e-24
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	4e-21
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	3e-20
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-15
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	8e-15
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	1e-12
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	4e-12
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	2e-10
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	1e-09
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-09
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	1e-09
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	6e-09
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-08
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	1e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	6e-08
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	1e-07
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-07
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	2e-07
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	5e-07
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	1e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	2e-06
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	2e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	3e-06
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	4e-06
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	5e-06
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	5e-06
cd07267	113	cd07267, THT_Oxygenase_N, N-terminal domain of 2,4	8e-06
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	9e-06
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	1e-05
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	1e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	2e-05
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	2e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-04
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	2e-04
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	2e-04
cd08342	136	cd08342, HPPD_N_like, N-terminal domain of 4-hydro	2e-04
cd07237	154	cd07237, BphC1-RGP6_C_like, C-terminal domain of 2	2e-04
cd07266	121	cd07266, HPCD_N_class_II, N-terminal domain of 3,4	4e-04
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	5e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	0.001
TIGR03211	303	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase	0.001
cd08360	134	cd08360, MhqB_like_C, C-terminal domain of Burkhol	0.001
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	0.003

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  413 bits (1063), Expect = e-147
 Identities = 168/190 (88%), Positives = 181/190 (95%)

Query: 77  NAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK 136
            +A AST+A  E  LEW KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK
Sbjct: 1   ASAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK 60

Query: 137 YTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTR 196
           YTNAFLGYGPEDS+FV+ELTYNYGVDKYDIGTGFGHFGIAV+DVAKTVEL+KAKGGKVTR
Sbjct: 61  YTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTR 120

Query: 197 EPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 256
           EPGPVKGG +VIAF++DPDGYKFEL++RGPTPEPLCQVMLRVGDLDRSI FYE+AFGM+L
Sbjct: 121 EPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKL 180

Query: 257 LRKRDNPEYK 266
           LRKRDNPEYK
Sbjct: 181 LRKRDNPEYK 190

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  266 bits (681), Expect = 2e-91
 Identities = 90/149 (60%), Positives = 108/149 (72%)

Query: 85  AAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY 144
           A     +   K  KRR+LH + RVGDLD+++ FYTE LGMKLLRKRD PE K++ AFLGY
Sbjct: 2   AESGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 145 GPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGG 204
           G E S  VIELT+N+G +KYD+G GFGH  I VDDV K  E ++A GG V REPGPVKGG
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGG 121

Query: 205 NTVIAFIEDPDGYKFELLERGPTPEPLCQ 233
            TVIAF+EDPDGYK EL++R  T + L  
Sbjct: 122 TTVIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  193 bits (493), Expect = 5e-63
 Identities = 64/123 (52%), Positives = 82/123 (66%), Gaps = 3/123 (2%)

Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 160
            LH + RV DL++++ FYT+ LGMKLLR++D PE K+T  FLGY  EDS  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 161 VD-KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
            +  YD G GFGH   AVDDV    E ++  G +VT+ PG        IAFI+DPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKG--IAFIKDPDGYWI 118

Query: 220 ELL 222
           EL+
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  167 bits (423), Expect = 1e-52
 Identities = 76/117 (64%), Positives = 91/117 (77%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 166
           RVGDL R+I FYT  LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+GVDKY++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 223
           GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK EL+E
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  161 bits (408), Expect = 3e-48
 Identities = 71/119 (59%), Positives = 82/119 (68%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
            +  V+ RVGDLDR+IKFY +  GMKLLRKRD PE KYT A +GYGPED   V+ELTYNY
Sbjct: 154 PLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNY 213

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
           GV +Y  G  +    I  DDV KT E IK  GGK+TREPGP+ G NT I    DPDG+K
Sbjct: 214 GVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWK 272

Length = 286

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  114 bits (288), Expect = 2e-32
 Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+ HV  RVGDL++++ FYT+ LG KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 160 GVDKYDIGT---GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
                  G           +VDDV    + +KA G ++ REPG    G     +  DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYS-YFRDPDG 115

Query: 217 YKFEL 221
              EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  108 bits (271), Expect = 1e-29
 Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 21/137 (15%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPE 147
           RR LH V++VG+ ++TIKFY E LGMK+LR  +  E            K++   +GYGPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 148 DSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 207
           D HFV+ELTYNYG+  Y++G  F    I        V   K     VT      +  + V
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQA---VSNAKKHNWPVT------EVEDGV 111

Query: 208 IAFIEDPDGYKFELLER 224
              ++ P GYKF L+++
Sbjct: 112 YE-VKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 94.0 bits (234), Expect = 2e-24
 Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           HV   V DL+  + FY + LG ++L +     E    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 163 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
               G G  H    VDDV   VE +KA G ++   P     G  V A+  DPDG   EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRV-AYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 87.6 bits (217), Expect = 4e-21
 Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 31/152 (20%)

Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY-----GPEDS------ 149
           M   ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY      P D       
Sbjct: 28  MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVW 87

Query: 150 ----HFVIELTYNYGVDK------YDIG----TGFGHFGIAVDDVAKTVELIKAKGGKVT 195
                  IELT+N+G +       Y  G     GFGH GI VDDV K  E  +  G +  
Sbjct: 88  TFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFV 147

Query: 196 REP--GPVKGGNTVIAFIEDPDGYKFELLERG 225
           ++P  G +KG    +AFI+DPDGY  E+ +  
Sbjct: 148 KKPDDGKMKG----LAFIKDPDGYWIEIFDLK 175

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 86.2 bits (213), Expect = 3e-20
 Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 55/244 (22%)

Query: 10  SIRPSLSTFRFSSSSRFGLPLSSFTPSRNLVFSPLASAVPQS--QLFGLR-AAKPLRGDV 66
           SI  ++S  R S       P SS +          ++  P+   +L     A++P     
Sbjct: 3   SIATAIS--RLSPLILIVKPYSSGSSFITC--FCNSTRKPKRFDRLRVFSMASEPKESPA 58

Query: 67  NSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKL 126
           N+ G+++S   A +                    M   +YR+ D   ++ FY+  LGM L
Sbjct: 59  NNPGLSTSPDEATKGYI-----------------MQQTMYRIKDPKASLDFYSRVLGMSL 101

Query: 127 LRKRDIPEEKYTNAFLGY-----GPED----------SHFVIELTYNYGVDK------YD 165
           L++ D PE K++  F+GY      P D              IELT+N+G +       Y 
Sbjct: 102 LKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDPDFKGYH 161

Query: 166 IGT----GFGHFGIAVDDVAKTVELIKAKGGKVTREP--GPVKGGNTVIAFIEDPDGYKF 219
            G     GFGH GI VDDV K  E  +  G +  ++P  G +KG    IAFI+DPDGY  
Sbjct: 162 NGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKG----IAFIKDPDGYWI 217

Query: 220 ELLE 223
           E+ +
Sbjct: 218 EIFD 221

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 71.3 bits (174), Expect = 2e-15
 Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 19/141 (13%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYG-----------PE 147
             + HV   V DL+ +I FYT+ LG++L++      +      L +              
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 148 DSHFVIELTYNYGV-DKYDIGT-GFGHFGIAVDDVA---KTVELIKAKGGKVTREPGPVK 202
                    +   V      G  G GH    VDD A     +  +   G ++        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 203 GGNTVIAFIEDPDGYKFELLE 223
           G   V  +  DPDG   EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 68.6 bits (168), Expect = 8e-15
 Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 8/115 (6%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 166
            V DL+    FY E LG ++       + +Y    LG       F+  +      +    
Sbjct: 2   PVSDLEAARAFYEELLGFEVEE----EDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
           G G  H    VDD+   V  +KA GG +   P     G     ++ DPDG   EL
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGR-EFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score = 63.7 bits (155), Expect = 1e-12
 Identities = 23/36 (63%), Positives = 28/36 (77%)

Query: 231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           L   MLRVGDLD+S++FY +  GM+LLRKRD PE K
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMK 53

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 61.4 bits (150), Expect = 4e-12
 Identities = 18/34 (52%), Positives = 25/34 (73%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
             MLRV DL++S++FY    GM+LLR++D PE K
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGK 36

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 57.1 bits (139), Expect = 2e-10
 Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 17/132 (12%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLL-RKRDIPEEKYTNAFLGYGPEDSHFVIEL------ 155
           H+   V DL+  +KFY + LG+    R+    E+    AFLG G  +    IEL      
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLG--NVQ--IELIEPLDD 58

Query: 156 --TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIED 213
                  ++K   G G  H    VDD+   +  +KA+G ++ +E   +  G   +AF+  
Sbjct: 59  DSPIAKFLEKR--GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHP 116

Query: 214 PDGYKF--ELLE 223
            D      EL+E
Sbjct: 117 KDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 29/120 (24%), Positives = 36/120 (30%), Gaps = 17/120 (14%)

Query: 108 VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG 167
             D +R   FY    G             Y     G G              G+ K    
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA-----------VGGLMKAPEP 55

Query: 168 TGFGHFG----IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 223
                 G     AVDDV      ++A GGKV   P  +  G    A   DP+G  F L +
Sbjct: 56  AAGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLWQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS-HFVIELTYNYGV 161
           HV  RV DL+ +  FYT+ LG++   +   P   +  A+L  G     H +IE       
Sbjct: 3   HVALRVPDLEASRAFYTDVLGLEEGPR---PPFLFPGAWLYAGDGPQLH-LIEED---PP 55

Query: 162 DKYDIGTG-FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA-FIEDPDGYKF 219
           D    G G   H    VDD+      +KA G   T    P  G   V   F+ DPDG + 
Sbjct: 56  DALPEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG---VRQLFVRDPDGNRI 112

Query: 220 EL 221
           EL
Sbjct: 113 EL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 11/128 (8%)

Query: 99  RRMLHVVY---RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIEL 155
                +V+    V DL+R   FY +  G       D+ E +Y   F   G      ++  
Sbjct: 5   GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYA-VFPADGAGAGGGLMA- 62

Query: 156 TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
                      G G      AVDD+  T+E + A GGKV R      GG   IA   DP+
Sbjct: 63  -----RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPE 116

Query: 216 GYKFELLE 223
           G +F L  
Sbjct: 117 GNRFGLWS 124

Length = 127

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           H+   V DLD    F+ + LG+          +    AF   G +     +EL      +
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 163 KYDI--GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 210
            +    G G  H    VDD+   V  ++A+G +V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 52.3 bits (125), Expect = 1e-08
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 235 MLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           MLRVGDL RSI+FY    GM+LLR  +NPEYK
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYK 32

Length = 129

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 13/127 (10%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMK--LLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 160
           HV   V DL+R+  FY   LG+      K       +     G      + V++      
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGT-----YLVLQQADGES 58

Query: 161 VDKYDI-GTGFGHFGIAVDDVAKT---VELIKAKGGKVTREPGPVK--GGNTVIAFIEDP 214
             ++D    G  H                 +  +G ++   P      G      F EDP
Sbjct: 59  AGRHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDP 118

Query: 215 DGYKFEL 221
           DG + EL
Sbjct: 119 DGIRLEL 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 49.9 bits (120), Expect = 6e-08
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 19/130 (14%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED-------SHFVIEL 155
           HV     D   T+ FYT+ LG++L++K    ++  T   L +G          + F    
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTY-HLFFGDGLGSPGTLLTFFEWPD 62

Query: 156 TYNYGVDKYDIGTG-FGHFGIAVDDVAKTVELIK---AKGGKVTREPGPVKGGNTVIAFI 211
               G      G G   H   +V   A      +   A G  V+      + G   + F 
Sbjct: 63  AGPKG----RRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGV--VDRFGERSLYF- 115

Query: 212 EDPDGYKFEL 221
           EDPDG + EL
Sbjct: 116 EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 33/126 (26%), Positives = 43/126 (34%), Gaps = 16/126 (12%)

Query: 103 HVVYRVGDLDRTIKFYTEC---LGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           HV   V DL+R   FY      LG+K +        +     +GYG         +T  +
Sbjct: 3   HVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTKPF 55

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKA---KGGKVTREPG--PVKGGNTVIAFIEDP 214
             +    G G  H   A            A    GG     PG  P  G     A++ DP
Sbjct: 56  DGEPATAGNGT-HVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDP 114

Query: 215 DGYKFE 220
           DG K E
Sbjct: 115 DGNKIE 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
            V LRVGDL++S++FY    G +L+ + D+ E  +
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPL 38

Length = 120

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 22/129 (17%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             +  V   V DL     FY E  G+ ++       E     +L       H ++ L  +
Sbjct: 2   TALRGVGLGVPDLAAAAAFYREVWGLSVV------AEDDGIVYLR-ATGSEHHILRLRRS 54

Query: 159 YGVDKYDIGTGFGHFGIA----VDDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIE 212
              D+  +      F +A    VD +A+ V    A+GG V  EPG     GG     F  
Sbjct: 55  ---DRNRLDV--VSFSVASRADVDALARQVA---ARGGTVLSEPGATDDPGGGYGFRFF- 105

Query: 213 DPDGYKFEL 221
           DPDG   E 
Sbjct: 106 DPDGRLIEF 114

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 19/130 (14%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY-----GPEDSHFV-IELT 156
            V   V D D+ + FYTE LG ++  + D+P         G+      P  S    + L 
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVPMGG------GFRWVTVAPPGSPETSLVLA 52

Query: 157 YNYGVDKYDIGT---GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIED 213
                     G    G     +  DD+  T E +KA+G + T EP  +  G   +A   D
Sbjct: 53  PPANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYG--TVAVFRD 110

Query: 214 PDGYKFELLE 223
           PDG  F L++
Sbjct: 111 PDGNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 41/172 (23%), Positives = 61/172 (35%), Gaps = 34/172 (19%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R  HV  RV DLD++ +FY + LG +               +L    E  H  + LT   
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP 57

Query: 160 GVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
                       + G  V   +D+ K  +  +  G  V        GG      +EDP G
Sbjct: 58  -------SAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVR---DGGQPEALRVEDPFG 107

Query: 217 YKFEL---------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 253
           Y  E                  RG +P  L    + V D+ R++ FY++  G
Sbjct: 108 YPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELG 159

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+ HV   V DL+   KFY + LG ++    ++PE+     F+  G      +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 160 GVDKY--DIGTGFGHFGIAVDDVAKTVELIKAKGGK-VTREPGPVKGGNTVIAFI--EDP 214
            + K+    G G  H  I VDD+   +E +K KG + +  EP     G  V AF+  +  
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPV-AFLHPKST 119

Query: 215 DGYKFELLE 223
            G   EL +
Sbjct: 120 GGVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY---TNAFLGYGPEDSHFVIELTYNY 159
           H+   V DL+++I FY + LG +L+      +E Y      ++    EDS    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
                        F I  ++  +  E +KA G ++  E   V+G    I F  DPDG+  
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 220 EL 221
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 36/139 (25%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           HVV  V DL+  ++FY + LG  +  +  +        FL   P D H  I L       
Sbjct: 4   HVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGL----VFLSRDP-DEHHQIALITGRPAA 58

Query: 163 KYDIGTGFGHFGIAVDDVAKTVEL---IKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
                 G  H    VD +    +L   ++A G        PV  GN    +  DPDG + 
Sbjct: 59  PPPGPAGLNHIAFEVDSLDDLRDLYERLRAAGIT---PVWPVDHGNAWSIYFRDPDGNRL 115

Query: 220 EL-LERGPTPEPLCQVMLR 237
           EL ++           ML 
Sbjct: 116 ELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 9/129 (6%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY- 157
           + + HV     D  R+ +FY E LG+ L+R+   PE K     L    E   + IEL   
Sbjct: 2   KGIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGE---YQIELFSF 58

Query: 158 -NYGVD-KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-GNTVIAFIEDP 214
            N      Y    G  H   AV+D+   V  +KA G +V  EP  V         F  DP
Sbjct: 59  PNPPPRPSYPEACGLRHLAFAVEDIEAAVAELKAHGVEV--EPIRVDEFTGKRFTFFYDP 116

Query: 215 DGYKFELLE 223
           DG   EL E
Sbjct: 117 DGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.5 bits (106), Expect = 5e-06
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+  V  RV DL+R++ FY + LG+++L + D      + A LG G +    V+E   + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 160 GVDKYDIGTGFGHFGIAVDDVA 181
                   TG  HF I +   A
Sbjct: 56  PPAPPG-TTGLYHFAILLPSRA 76

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 44.1 bits (105), Expect = 5e-06
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 164
           V  V D+++++ FY + LG ++  +   PE  Y  A +      +   +           
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRD--GAQLHLSEHDGDEWVPL 56

Query: 165 DIGTGFGHFGIAVDDVAKTVELIKAKG-GKVTREPGPVKGGNTVIAFIEDPDGY 217
             G       I VDDV      +KAKG   +   P     G    A ++DPDG 
Sbjct: 57  GRGGN---VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGN 106

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|176688 cd07267, THT_Oxygenase_N, N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

 Score = 43.7 bits (104), Expect = 8e-06
 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 17/124 (13%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             + HV +   DLD+  +F T+  G+++  + D  +E Y   + GYG +   FV      
Sbjct: 2   TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--DELY---YRGYGTD--PFV------ 47

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
           Y   K +    F          A   +     G  V  +     GG  V   + DPDG+ 
Sbjct: 48  YVARKGE-KARFVGAAFEAASRADLEKAAALPGASVIDDLEAPGGGKRVT--LTDPDGFP 104

Query: 219 FELL 222
            EL+
Sbjct: 105 VELV 108

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity. Length = 113

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.7 bits (104), Expect = 9e-06
 Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 26/126 (20%)

Query: 108 VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY--D 165
           V DL R+  FY    G K         +    AF   G      V+ L   +  ++   D
Sbjct: 6   VADLARSRAFYRA-GGWK---TSADSNDGV--AFFQLG----GLVLAL---FPREELAKD 52

Query: 166 IG-----TGFGHFGIA-----VDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
            G      GF    +A      D+V   +    A G  + + P  V  G     +  DPD
Sbjct: 53  AGVPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGG-YSGYFADPD 111

Query: 216 GYKFEL 221
           G+ +E+
Sbjct: 112 GHLWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDN 262
            V LRV DL+RS+ FY+   G+E+L + D+
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 26/128 (20%)

Query: 102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS--HFVIELTYNY 159
            HV   V DL+ +I FY++  G++  + RD     Y      +  ED   +FV+      
Sbjct: 3   FHVALNVDDLEASIAFYSKLFGVEPTKVRDD----YAK----FLLEDPRLNFVLN----- 49

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF-------IE 212
                  G G  H G+ VD      E+ +AK           K  +T   +       + 
Sbjct: 50  -ERPGAPGGGLNHLGVQVDSAE---EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVT 105

Query: 213 DPDGYKFE 220
           DPDG  +E
Sbjct: 106 DPDGNAWE 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRD 131
           +R+ HVV  V D++ T+ FYT  LGM+++R  +
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           H+   V DL+R++ FY + LG KL  + D        A+L  G  D    + +  N G  
Sbjct: 4   HITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAG--DLWLCLSVDANVGPA 55

Query: 163 KYDIGTGFGH--FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 220
           K      + H  F ++ +D A   E ++  G K  +E      G++   +  DPDG+K E
Sbjct: 56  K-----DYTHYAFSVSEEDFASLKEKLRQAGVKEWKE--NTSEGDSF--YFLDPDGHKLE 106

Query: 221 L 221
           L
Sbjct: 107 L 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 40.9 bits (95), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
            V L V DL+ SI+FY    G+ L++   N   
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEAD 37

Length = 138

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 108 VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSH--FVIELTYNYGVD-KY 164
           V DL+    FY + LG++L+ K D        AF   G       F    T   G +   
Sbjct: 8   VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRGMLLLFDPGATSTPGGEIPP 62

Query: 165 DIGTGFGHFGIAV--DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 222
             G+G GHF  A+  +++A+    ++AKG  +  E    +GG ++  +  DPDG   EL 
Sbjct: 63  HGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSL--YFRDPDGNLLELA 120

Query: 223 ER 224
             
Sbjct: 121 TP 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 40/184 (21%), Positives = 61/184 (33%), Gaps = 34/184 (18%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVI--ELTYNYG 160
            V + VGD  +   +Y    G + + K     EK ++          +FV+    + +  
Sbjct: 5   FVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHV---LRQGQINFVLTAPYSSDSP 61

Query: 161 VDKYDI--GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIE------ 212
              +    G G       VDD A   E    +G +  + P  +  G   +A I+      
Sbjct: 62  AADFAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVV 121

Query: 213 ----DPDGYK-------FELLERGPTPEPLCQVMLRV----------GDLDRSINFYEQA 251
               D  GYK       FE L      EP   V L            G ++    FYE+ 
Sbjct: 122 HTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEFYEKI 181

Query: 252 FGME 255
           FG  
Sbjct: 182 FGFR 185

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|176690 cd08342, HPPD_N_like, N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 9/127 (7%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           HV + VG+  +   +++  LG + +      E+K +         D +FV+    N    
Sbjct: 3   HVEFYVGNAKQLASWFSTKLGFEPVAYH-GSEDKASYL---LRQGDINFVLNSPLNSFAP 58

Query: 163 KYDI----GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
             D     G G       VDD A   E   A+G K  +EP   + G   IA I+      
Sbjct: 59  VADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEP-VEEPGELKIAAIKGYGDSL 117

Query: 219 FELLERG 225
             L++R 
Sbjct: 118 HTLVDRK 124

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_N_like domain represents the N-terminal domain. Length = 136

>gnl|CDD|176661 cd07237, BphC1-RGP6_C_like, C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 14/103 (13%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKL---LRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           HVV    D D    FY + LG +L   +     P       FL       H +       
Sbjct: 12  HVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRH-HSL------- 63

Query: 160 GVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPG 199
            + +        H  + V   DDV +  + ++A+G  +    G
Sbjct: 64  ALAEGPGPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLG 106

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in this subfamily. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, they belong to a different subfamily of the ED_TypeI_classII_C (C-terminal domain of type I, class II extradiol dioxygenases) family. Length = 154

>gnl|CDD|211354 cd07266, HPCD_N_class_II, N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 20/127 (15%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+ HV  RV DLDR+ +FY + LG+ +       EE     +L    E  H  + LT   
Sbjct: 4   RLGHVELRVTDLDRSREFYVDLLGLVVT------EEDDGAIYLRGLEEFIHHSLVLT--- 54

Query: 160 GVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTR-EPGPVKG-GNTVIAFIEDP 214
              K       GH G  V   +D+ K     +  G      E G   G G  +   ++DP
Sbjct: 55  ---KAP-EPAVGHLGFRVRSEEDLDKAEAFFQELGLPTRWVEAGEEPGQGRALR--VQDP 108

Query: 215 DGYKFEL 221
            G+  E 
Sbjct: 109 LGFPLEF 115

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a different superfamily. Length = 121

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPE 264
            V L V DL+ ++ FYE   G E+L +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGA 32

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           HVV R  D+  T  FYT+ LG ++  +   P      A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFRVSDRVGDPGVLAA-AWL-RCDDEHHDL-------ALF 52

Query: 163 KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGY 217
               G G  H    V   DD+ +  + + A G  +  E GP +   GN +  +  DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 218 KFEL 221
           + EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|234146 TIGR03211, catechol_2_3, catechol 2,3 dioxygenase

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 20/127 (15%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL-GYGPEDSHFVIELTYN 158
           R+ HV  RV DL+ ++K YT+ LG+      +         +L  +   D + VI LT  
Sbjct: 4   RLGHVELRVLDLEESLKHYTDVLGL------EETGRDGQRVYLKAWDEWDHYSVI-LTEA 56

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREP-GPVKGGNTVIAFIEDP 214
              D      G  H    V    D+ + V+ ++A G      P G + G    + F   P
Sbjct: 57  ---DT----AGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRF-TLP 108

Query: 215 DGYKFEL 221
            G+  EL
Sbjct: 109 SGHTMEL 115

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase [Energy metabolism, Other]. Length = 303

>gnl|CDD|176708 cd08360, MhqB_like_C, C-terminal domain of Burkholderia sp

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 15/127 (11%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLL-RKRDIPEEKYTNAFLGYGPEDSHFVIELTY 157
           RR+ HVV  V D++    FY + LG ++  R +         AFL       H  + L  
Sbjct: 2   RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKGR------GAFLRAAGGGDHHNLFL-- 53

Query: 158 NYGVDKYDIGTGFGHFGIAVDDVAKTVE---LIKAKGGKVTREPGPVKGGNTVIAFIEDP 214
              +       GF H    V D+ + +     +   G +    PG  + G+    +  DP
Sbjct: 54  ---IKTPAPMAGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDP 110

Query: 215 DGYKFEL 221
            G + E 
Sbjct: 111 WGGEVEY 117

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Length = 134

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRD 261
            V L V DL+ SI FY + FG+E  + RD
Sbjct: 4   HVALNVDDLEASIAFYSKLFGVEPTKVRD 32

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	268
PLN02300	286	lactoylglutathione lyase	99.97
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.93
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.87
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.86
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.86
PLN02367	233	lactoylglutathione lyase	99.86
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.86
PRK10291	129	glyoxalase I; Provisional	99.85
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.83
PLN03042	185	Lactoylglutathione lyase; Provisional	99.81
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.81
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.8
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.8
PRK11478	129	putative lyase; Provisional	99.8
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.78
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.77
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.77
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.77
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.76
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.76
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.76
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.75
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.75
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.74
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.73
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.73
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.72
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.72
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.72
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.72
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.72
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.71
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.71
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.71
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.7
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.7
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.7
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.7
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.7
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.7
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.7
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.7
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.7
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.7
PLN02300	286	lactoylglutathione lyase	99.69
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.69
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.69
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.69
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.69
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.68
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.68
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.68
PRK06724	128	hypothetical protein; Provisional	99.67
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.67
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.67
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.67
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.67
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.66
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.65
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.65
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.65
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.64
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.63
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.63
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.63
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.63
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.62
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.62
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.61
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.61
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.6
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.6
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.6
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.6
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.58
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.58
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.58
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.57
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.56
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.5
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.48
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.46
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.45
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.35
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.31
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.23
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.14
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.12
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.1
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.08
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.04
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.99
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.98
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.94
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.76
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.67
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.61
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.57
PRK10148	147	hypothetical protein; Provisional	98.5
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.47
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	98.2
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.17
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.68
PLN02367	233	lactoylglutathione lyase	97.59
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	97.57
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	97.41
PLN03042	185	Lactoylglutathione lyase; Provisional	97.39
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.29
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	97.28
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	97.28
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	97.26
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	97.11
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	97.08
PRK11478	129	putative lyase; Provisional	97.02
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	97.01
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	96.97
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	96.94
COG3324	127	Predicted enzyme related to lactoylglutathione lya	96.86
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	96.84
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	96.83
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	96.82
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	96.79
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	96.75
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	96.68
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	96.65
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	96.6
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	96.59
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	96.56
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	96.55
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	96.48
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	96.48
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	96.47
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	96.42
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	96.26
PF15067	236	FAM124: FAM124 family	96.21
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	96.19
PRK06724	128	hypothetical protein; Provisional	96.14
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	96.12
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	96.1
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	96.03
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	96.01
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	95.88
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	95.68
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	95.63
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	95.62
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	95.58
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	95.57
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	95.5
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	95.47
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	95.43
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	95.15
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	94.9
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	94.66
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.24
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	93.93
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	93.6
PRK04101	139	fosfomycin resistance protein FosB; Provisional	93.42
PRK10291	129	glyoxalase I; Provisional	93.3
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	93.03
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	92.99
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	92.61
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	92.38
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	92.02
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	91.74
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	91.26
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	90.78
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	89.59
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	88.91
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	88.76
PRK11700	187	hypothetical protein; Provisional	87.13
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	85.67
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	85.6
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	85.41
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	85.02
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	83.37
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	83.12
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	83.0
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	81.19

>PLN02300 lactoylglutathione lyase

Probab=99.97  E-value=1.5e-29  Score=226.48  Aligned_cols=186  Identities=90%  Similarity=1.473  Sum_probs=156.1

Q ss_pred             ccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC
Q 024414           81 ASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG  160 (268)
Q Consensus        81 ~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~  160 (268)
                      +++++.......|.++++.+|+||+|.|+|++++++||+++|||++..+...++..+..+++..++...++.+++.....
T Consensus         5 ~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~   84 (286)
T PLN02300          5 ASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYG   84 (286)
T ss_pred             cccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCC
Confidence            35566777788898889999999999999999999999999999998765544455566777666544566778766444


Q ss_pred             CCCCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCceeEEEEcCC
Q 024414          161 VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGD  240 (268)
Q Consensus       161 ~~~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~v~L~v~d  240 (268)
                      ......+.|+.|++|.|+|+++++++++++|+++..++...++|..+.+|++|||||.|||+++.+.+.+++|+.|.|.|
T Consensus        85 ~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d  164 (286)
T PLN02300         85 VDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGD  164 (286)
T ss_pred             CCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEeCC
Confidence            44444567889999999999999999999999998888777766667889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCeEeeeecCCCCC
Q 024414          241 LDRSINFYEQAFGMELLRKRDNPEYK  266 (268)
Q Consensus       241 ~~~s~~FY~~vlG~~~~~~~~~p~~~  266 (268)
                      ++++.+||+++|||++.+..+.|+.+
T Consensus       165 ~~~a~~Fy~~~lg~~~~~~~~~~~~~  190 (286)
T PLN02300        165 LDRSIKFYEKAFGMKLLRKRDNPEYK  190 (286)
T ss_pred             HHHHHHHHHhccCCEEEeeecccccc
Confidence            99999999999999998766666544

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.93  E-value=3e-25  Score=186.76  Aligned_cols=162  Identities=56%  Similarity=1.016  Sum_probs=148.3

Q ss_pred             ChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-----------CceeEEEEeeCCCCceEEEEEee
Q 024414           89 SALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPEDSHFVIELTY  157 (268)
Q Consensus        89 g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~  157 (268)
                      .+.+|.+++..++-|+++.|.|.++++.||+++|||++....+.++           +.+...++++|+++.++++|+++
T Consensus         6 d~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTY   85 (299)
T KOG2943|consen    6 DLLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTY   85 (299)
T ss_pred             hhhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEe
Confidence            4579999999999999999999999999999999999998877766           67788999999999999999999


Q ss_pred             ccCCCCCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCceeEEEE
Q 024414          158 NYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLR  237 (268)
Q Consensus       158 ~~~~~~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~v~L~  237 (268)
                      +++...+..|+++.||.+.++|+-..++.+...|.+.         ++...+++.||||+.|+++++.|.+.++++|+|+
T Consensus        86 NYgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~~---------~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~  156 (299)
T KOG2943|consen   86 NYGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGKG---------SGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLN  156 (299)
T ss_pred             ccCccceeccCCcccEEEeHHHHHHHHHHhcCcCCcc---------cceEEEEEECCCCcEEEEeccCCCCCCeEEEEEE
Confidence            9999999999999999999999888888888777532         2345688999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHHhcCCeEeee
Q 024414          238 VGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      |+|+++++.||+++|||++.++
T Consensus       157 VgdL~ks~kyw~~~lgM~ilek  178 (299)
T KOG2943|consen  157 VGDLQKSIKYWEKLLGMKILEK  178 (299)
T ss_pred             ehhHHHHHHHHHHHhCcchhhh
Confidence            9999999999999999999885

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.87  E-value=1.2e-20  Score=169.73  Aligned_cols=153  Identities=24%  Similarity=0.306  Sum_probs=114.4

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||+|.|+|++++++||+++|||++..+...      .+++..........+.+...       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            56899999999999999999999999998765321      23443322111223333321       134788999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---------------------CCCcee
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------------PEPLCQ  233 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---------------------~~~l~~  233 (268)
                      +   |+++++++|+++|+++...+.....+.++.+|++|||||.|||++....                     ..+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            8   7999999999999998765542223344789999999999999985431                     235889


Q ss_pred             EEEEcCCHHHHHHHHHHhcCCeEeeeecCC
Q 024414          234 VMLRVGDLDRSINFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       234 v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p  263 (268)
                      +.|.|.|++++.+||+++|||++......+
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~  178 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLG  178 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcC
Confidence            999999999999999999999986654444

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.86  E-value=2.3e-20  Score=167.18  Aligned_cols=151  Identities=25%  Similarity=0.379  Sum_probs=113.7

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+|+||.|.|+|++++++||+++|||++..+.+      ..+++..........+.+...       ...++.|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            46799999999999999999999999999876532      134443322211223333321       12467899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC---------------CCCCceeEEEEc
Q 024414          177 VD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRV  238 (268)
Q Consensus       177 V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~---------------~~~~l~~v~L~v  238 (268)
                      |+   |+++++++|+++|+++...+.  + +..+.+||+|||||.|||++...               .+.+++|+.|.|
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~--~-~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v  144 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRD--G-GQPEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV  144 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecC--C-CCceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEe
Confidence            97   789999999999999876433  2 23488999999999999997331               124689999999


Q ss_pred             CCHHHHHHHHHHhcCCeEeeeecCC
Q 024414          239 GDLDRSINFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       239 ~d~~~s~~FY~~vlG~~~~~~~~~p  263 (268)
                      .|++++.+||+++|||++......+
T Consensus       145 ~dl~~a~~Fy~~~lG~~~~~~~~~~  169 (294)
T TIGR02295       145 PDVQRALRFYKEELGFRVTEYTEDD  169 (294)
T ss_pred             CCHHHHHHHHHHhcCCEEEEEeccC
Confidence            9999999999999999987664443

The enzyme from Bacillus brevis contains manganese.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.86  E-value=2.1e-20  Score=151.54  Aligned_cols=138  Identities=64%  Similarity=1.086  Sum_probs=106.3

Q ss_pred             hhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEE
Q 024414           95 KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFG  174 (268)
Q Consensus        95 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  174 (268)
                      +..+++|+||.|.|.|++++++||+++|||++......++..+..+++..++......+++.......+...+.++.|++
T Consensus        12 ~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~   91 (150)
T TIGR00068        12 KTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIA   91 (150)
T ss_pred             ccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEE
Confidence            45688999999999999999999999999998766544444444566665543334556665433333333456888999


Q ss_pred             EEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCce
Q 024414          175 IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLC  232 (268)
Q Consensus       175 f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~  232 (268)
                      |.|+|+++++++|.++|+++..++...+++..+.+|++|||||.|||++..+....+|
T Consensus        92 f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  149 (150)
T TIGR00068        92 IGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGLG  149 (150)
T ss_pred             EecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhcc
Confidence            9999999999999999999887776566666678899999999999999887655544

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.86  E-value=3.6e-20  Score=159.24  Aligned_cols=129  Identities=40%  Similarity=0.696  Sum_probs=105.6

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCC---------------CceEEEEEeeccC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE---------------DSHFVIELTYNYG  160 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~lel~~~~~  160 (268)
                      .....+.|++|.|+|++++++||+++|||++..+.+.++.++..+|+.+++.               +....|||.++.+
T Consensus        71 t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g  150 (233)
T PLN02367         71 TKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWG  150 (233)
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCC
Confidence            4567899999999999999999999999999998888888888899865431               1134789988655


Q ss_pred             CCC------CCCC----CCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          161 VDK------YDIG----TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       161 ~~~------~~~g----~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ...      +..+    .|+.||||.|+|+++++++|+++|+++..+|....+  .+.+|++|||||.|||+|...
T Consensus       151 ~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        151 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence            432      3322    489999999999999999999999999877765432  467899999999999998765

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.86  E-value=3.4e-20  Score=165.78  Aligned_cols=150  Identities=23%  Similarity=0.322  Sum_probs=113.4

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||+|.|+|++++++||+++|||++.....  .   ...|+..+...  ..+.+....       ..++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~~--~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSRA--HRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCCc--eEEEEEECC-------cCCeeeEeeee
Confidence            4689999999999999999999999998764321  1   13455554322  233333221       13577999999


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcc--cCCCCeEEEEEECCCCCEEEEEEeCCC------------------CCCceeE
Q 024414          178 DD---VAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  234 (268)
Q Consensus       178 ~D---id~~~~~L~~~G~~i~~~p~~--~~~G~~~~~~~~DPdG~~iEl~e~~~~------------------~~~l~~v  234 (268)
                      +|   +++++++|+++|+++...+..  ...|..+.++|.|||||.|||+.....                  +.+++|+
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  146 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHI  146 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEE
Confidence            98   889999999999998765532  122446789999999999999963321                  2368999


Q ss_pred             EEEcCCHHHHHHHHHHhcCCeEeeeec
Q 024414          235 MLRVGDLDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       235 ~L~v~d~~~s~~FY~~vlG~~~~~~~~  261 (268)
                      .|.|.|++++.+||+++|||++..+..
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~  173 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVID  173 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEc
Confidence            999999999999999999999876643

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PRK10291 glyoxalase I; Provisional

Probab=99.85  E-value=8.8e-20  Score=143.88  Aligned_cols=126  Identities=61%  Similarity=1.065  Sum_probs=98.0

Q ss_pred             EEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHHH
Q 024414          106 YRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVE  185 (268)
Q Consensus       106 l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~~  185 (268)
                      |.|+|++++++||+++|||++......++..+..+++..++......+++...........+.++.|+||.|+|++++++
T Consensus         2 l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~~   81 (129)
T PRK10291          2 LRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACE   81 (129)
T ss_pred             EEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHHH
Confidence            78999999999999999999887665555566677776654433445666654443444456688999999999999999


Q ss_pred             HHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCc
Q 024414          186 LIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL  231 (268)
Q Consensus       186 ~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l  231 (268)
                      +|+++|+++..++...+++..+.+|++|||||.|||++....+..+
T Consensus        82 ~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~~~~  127 (129)
T PRK10291         82 KIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  127 (129)
T ss_pred             HHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccccccc
Confidence            9999999988766666566567788999999999999987655444

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.83  E-value=4.3e-19  Score=153.21  Aligned_cols=158  Identities=23%  Similarity=0.370  Sum_probs=124.4

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeecc-CCCCCCCCCCeeEEE
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY-GVDKYDIGTGFGHFG  174 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~-~~~~~~~g~g~~hi~  174 (268)
                      +..+.++.|.|.|+|++++..||+++||+++..+..      ..+.+..+..   ..+.+.+.. ...+..+..|+.|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCE---EEEEEEeCCCCCCCCccccceeeee
Confidence            345678899999999999999999999999988755      2455655542   345555533 333345778999999


Q ss_pred             EEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC------------------------
Q 024414          175 IAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------------  227 (268)
Q Consensus       175 f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~------------------------  227 (268)
                      |.+++   +.++..++...|..+.+.   .++.....+|+.||+||-||++.++|.                        
T Consensus        77 fLlP~r~~L~~~l~hl~~~~~~l~Ga---~DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~  153 (265)
T COG2514          77 FLLPTREDLARVLNHLAEEGIPLVGA---SDHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLE  153 (265)
T ss_pred             eecCCHHHHHHHHHHHHhcCCccccc---CcchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhh
Confidence            99995   778888999999887522   234456789999999999999988642                        


Q ss_pred             ------------CCCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCCCCC
Q 024414          228 ------------PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV  267 (268)
Q Consensus       228 ------------~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~~~~  267 (268)
                                  ...++||+|+|.|++++.+||+++|||+++.+  .|.+.|
T Consensus       154 ~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~--~~~A~F  203 (265)
T COG2514         154 EATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTAR--GPSALF  203 (265)
T ss_pred             hccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeec--CCcceE
Confidence                        12479999999999999999999999998887  666655

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.81  E-value=1.6e-18  Score=145.48  Aligned_cols=129  Identities=38%  Similarity=0.670  Sum_probs=100.5

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCC---------------ceEEEEEeeccC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPED---------------SHFVIELTYNYG  160 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~lel~~~~~  160 (268)
                      +...++.|++|.|+|++++++||+++|||++..+...++.++..+|+..++..               ....|+|.++..
T Consensus        23 ~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~  102 (185)
T PLN03042         23 TKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWG  102 (185)
T ss_pred             CCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCC
Confidence            46779999999999999999999999999998887766667777887643211               234688887543


Q ss_pred             CCC------CC----CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          161 VDK------YD----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       161 ~~~------~~----~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ...      +.    .+.|+.|++|.|+|+++++++|+++|+.+...+....  ..+.+|++||||+.|||++...
T Consensus       103 ~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        103 TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEECCC
Confidence            221      22    1248999999999999999999999999886654332  2467888999999999998654

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=2.2e-18  Score=137.80  Aligned_cols=123  Identities=26%  Similarity=0.333  Sum_probs=90.4

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-----------CceeEEEEeeCCCCceEEEEEeeccCCC----
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPEDSHFVIELTYNYGVD----  162 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~~~~~~----  162 (268)
                      +.+++||+|.|+|++++++||++ |||++.......+           .....+++....  ....+++.......    
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCc
Confidence            36899999999999999999998 9998865543211           123334454322  23456766532111    


Q ss_pred             ---CCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          163 ---KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       163 ---~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                         ....+.|+.|+||.|+|+++++++|+++|+++..++...++ +.+.+|++||||+.|||+|.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~-~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYEN-SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCC-CeEEEEEECCCCCEEEeeec
Confidence               11235688999999999999999999999999876655544 46889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.80  E-value=3.5e-18  Score=132.12  Aligned_cols=120  Identities=54%  Similarity=0.938  Sum_probs=90.3

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC-CCCCCCCCeeEEEEEECC
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-DKYDIGTGFGHFGIAVDD  179 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~f~V~D  179 (268)
                      |+||+|.|+|++++++||+++||+++......++.++..+++..........+++...... .....+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5899999999999999999999999887654443344556676543102234555543222 223344578899999999


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       180 id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      +++++++++++|+++..++...  +..+.+|++|||||+|||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            9999999999999998877655  3457899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.80  E-value=4e-18  Score=135.93  Aligned_cols=123  Identities=23%  Similarity=0.274  Sum_probs=93.3

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC------CCCCCCeeEEE
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK------YDIGTGFGHFG  174 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~g~g~~hi~  174 (268)
                      |+|+.|.|+|++++++||+++|||++......+  +....++..+    ...+++........      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            689999999999999999999999988764432  1223334322    24555554222111      12456889999


Q ss_pred             EEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCC
Q 024414          175 IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  230 (268)
Q Consensus       175 f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~  230 (268)
                      |.|+|+++++++|+++|+++..+|...++ +.+.++++||||+.|||+|+....++
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~-~~~~~~i~dp~G~~ie~~~~~~~~~~  129 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPG-ELKIAAIKGYGDSLHTLVDRKGYKGP  129 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCC-eEEEEEEeccCCcEEEEEecCCCCCc
Confidence            99999999999999999999988887554 57899999999999999998776443

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PRK11478 putative lyase; Provisional

Probab=99.80  E-value=3.6e-18  Score=133.95  Aligned_cols=123  Identities=22%  Similarity=0.271  Sum_probs=85.0

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC---CCCCCCCCCeeEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFG  174 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~~g~g~~hi~  174 (268)
                      +.+|+||+|.|+|++++++||+++|||++..+...+........+..+.   ...+++.....   ........|+.|++
T Consensus         4 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          4 LKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNG---QYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             cceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCC---CcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            5689999999999999999999999999864322111111111222221   23455554211   11112345788999


Q ss_pred             EEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          175 IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       175 f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      |.|+|+++++++|+++|+++........+| .+.+|++|||||.|||+|.
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQ-KRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCC-CEEEEEECCCCCEEEEEeC
Confidence            999999999999999999986443333333 5789999999999999973

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=2e-17  Score=130.73  Aligned_cols=115  Identities=45%  Similarity=0.890  Sum_probs=87.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-----------CceeEEEEeeCCCCceEEEEEeeccCCCCCCCC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG  167 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g  167 (268)
                      .++.|++|.|+|++++++||+++|||++..+...++           +.+..+++.+++......+++.++.+..++..+
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            368999999999999999999999999887665444           333345565544445678999987666556656


Q ss_pred             CCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          168 TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      .+  |++|.|++. ++.++|+++|+++...+.    +   .+++.||||+.|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            55  566666666 556999999998875433    2   6899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.6e-17  Score=128.58  Aligned_cols=121  Identities=29%  Similarity=0.399  Sum_probs=85.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC--C-CCCCCCCCeeEEEE
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG--V-DKYDIGTGFGHFGI  175 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~--~-~~~~~g~g~~hi~f  175 (268)
                      .+|+||+|.|.|++++++||+++|||+........+.......+... ..  ..+++.....  . .....+.|+.|++|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~--~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLN-GG--YQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecC-CC--cEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            57999999999999999999999999987653322221112222221 22  2344433211  1 11123458889999


Q ss_pred             EECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          176 AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       176 ~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      .|+|+++++++++++|+++..++....+| .+.+|++||+||.|||+|
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHLKAKGVEVEPIRVDEFTG-KRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCc-eEEEEEECCCCCEEEecC
Confidence            99999999999999999987655444443 578999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.3e-17  Score=129.38  Aligned_cols=119  Identities=25%  Similarity=0.406  Sum_probs=86.9

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC---CCCCCCeeEEEEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK---YDIGTGFGHFGIA  176 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~---~~~g~g~~hi~f~  176 (268)
                      +|+||+|.|+|++++++||+++|||+.......+..++...|+..++   ...+++........   .....|..|+||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47999999999999999999999999865544333344456666542   23466654222111   1234578899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          177 VD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       177 V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      |+   |+++++++|+++|+++..++...++| .+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g-~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDG-YYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCC-eEEEEEECCCCCEEEeC
Confidence            96   48999999999999998766555544 45577999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.77  E-value=2e-17  Score=136.17  Aligned_cols=127  Identities=29%  Similarity=0.334  Sum_probs=89.1

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEe----cC--------------CCCceeEEEEeeCCCCceEEEEEeecc
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKR----DI--------------PEEKYTNAFLGYGPEDSHFVIELTYNY  159 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~----~~--------------~~~~~~~~~l~~g~~~~~~~lel~~~~  159 (268)
                      .++++||+|.|+|+++|++||+++|||++..+.    ..              ....+..+++..++   ...+++.+..
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            468999999999999999999999999875321    10              01124456665443   2347777643


Q ss_pred             CCCCCC-----CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCC-ccc-CC-CCeEEEEEECCCCCEEEEEEeCCC
Q 024414          160 GVDKYD-----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP-GPV-KG-GNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       160 ~~~~~~-----~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p-~~~-~~-G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      ......     .+.|+.|+||.|+|+++++++|+++|+++..++ ... +. ...+.+|++|||||.|||+++..+
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            221111     246899999999999999999999998764332 211 11 124789999999999999988753

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=3.3e-17  Score=127.57  Aligned_cols=116  Identities=29%  Similarity=0.308  Sum_probs=85.0

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||++......     ..+++..........+.+...       ...++.|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEeccC-------CCCCeeEEEEEe
Confidence            57899999999999999999999999998754321     124444322222223433221       134678999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +   |+++++++|+++|+++...+.....+.++.+||+|||||.||+++..
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            7   79999999999999987655433334457899999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=5.2e-17  Score=130.93  Aligned_cols=118  Identities=17%  Similarity=0.247  Sum_probs=85.9

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCc-eeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK-YTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ..+|+||+|.|+|++++.+||+++|||++..+...+++. ....|+..+...+  .+.+...       .+.++.|+||.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~~h--~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNKPH--DIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCCcc--eEEEecC-------CCCCceEEEEE
Confidence            568999999999999999999999999986654322222 2245555443322  2333211       13578899999


Q ss_pred             ECCHHH---HHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          177 VDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       177 V~Did~---~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      |+|+++   +.++|+++|+++..+|.....+..+.+||.|||||.|||++.
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            999877   678999999998766654443345789999999999999864

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.76  E-value=1.9e-17  Score=134.97  Aligned_cols=122  Identities=23%  Similarity=0.346  Sum_probs=87.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC-CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      +|+||+|.|+|++++++||+++||+++......+ ..+...+|+..++...  .++... ..... ..++++.||||.|+
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~-~~l~~-~~~~g~~Hiaf~v~   76 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEE--YVDHHT-LALAQ-GPESGVHHAAFEVH   76 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCC--cccchH-HHHhc-CCCCceeEEEEEcC
Confidence            5899999999999999999999999987654332 2333566776543210  011100 00000 11468999999999


Q ss_pred             CHHHHH---HHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          179 DVAKTV---ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       179 Did~~~---~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      |++++.   ++|+++|+++..++.....|....+|++|||||.|||+...
T Consensus        77 die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          77 DFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             CHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999986   99999999988766655555556789999999999999665

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.75  E-value=7.6e-17  Score=128.15  Aligned_cols=119  Identities=24%  Similarity=0.309  Sum_probs=88.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      .+|+||+|.|+|++++++||+++||+++......     ...|+..+.......+.+.....     ...++.|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-----~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-----RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-----cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            4799999999999999999999999998755321     24566554322223455443211     1468999999999


Q ss_pred             CHHHHH---HHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          179 DVAKTV---ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       179 Did~~~---~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      |++++.   ++|+++|+++..++...+.+..+.+|++||+|+.|||......
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~  123 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDY  123 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccccc
Confidence            988776   5999999998766655555556779999999999999976543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.75  E-value=5.5e-17  Score=129.82  Aligned_cols=118  Identities=22%  Similarity=0.417  Sum_probs=87.8

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      |+.+|+||.|.|+|++++++||+++||+++..+..      ..+++..+.    ..+.+...........+.++.|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g----~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG----LWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC----eEEEeeccCCCCCccCCCCeeEEEEE
Confidence            67899999999999999999999999999875422      234554432    23444332221222234567899999


Q ss_pred             EC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          177 VD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       177 V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      ++  |+++++++++++|+++..++...++ +.+.+|++|||||.|||.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence            98  9999999999999998766555544 458899999999999998654

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.74  E-value=5.4e-17  Score=126.66  Aligned_cols=119  Identities=33%  Similarity=0.527  Sum_probs=85.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC------CCCCCCeeEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK------YDIGTGFGHF  173 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~g~g~~hi  173 (268)
                      +|+|++|.|+|++++++||+++|||+........+.+...+++..++    ..+++........      ...+.|+.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN----TKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC----EEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            58999999999999999999999999876543333344556665542    2455544211111      0124578899


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeC-CcccCCCCeEEEEE--ECCCCCEEEEEE
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLE  223 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~-p~~~~~G~~~~~~~--~DPdG~~iEl~e  223 (268)
                      ||.|+|+++++++|+++|+++..+ |...++| .+..++  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGG-KPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCC-CEEEEecccccCcEEEEecC
Confidence            999999999999999999998764 4444444 455666  699999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.73  E-value=1.2e-16  Score=130.37  Aligned_cols=123  Identities=21%  Similarity=0.340  Sum_probs=91.5

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC---CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP---EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHF  173 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  173 (268)
                      ...+|+||+|.|+|++++++||+++||+++.......   +.....+++..++..+.  +.+...      ..+.++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHS--LALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCC--EEEEcC------CCCceeEEE
Confidence            4568999999999999999999999999987643321   11334566666443332  333321      124689999


Q ss_pred             EEEECCHH---HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          174 GIAVDDVA---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       174 ~f~V~Did---~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      +|.|+|++   +++++|+++|+++..++...+.+..+.+|++||+|+.|||+.....
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~  134 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRT  134 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceE
Confidence            99998755   6899999999999877666655567889999999999999977643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.73  E-value=3.3e-17  Score=126.95  Aligned_cols=120  Identities=28%  Similarity=0.409  Sum_probs=85.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC--CCCceeEEEEeeCCCCceEEEEEeeccCCCCCCC---CCCeeEEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI--PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI---GTGFGHFG  174 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~---g~g~~hi~  174 (268)
                      +|+||+|.|+|++++++||+++|||+.......  ........++..+..  .+.+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG--HIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS--CEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc--ceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999987762  222233445544432  33343333222211111   01345666


Q ss_pred             EEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEE
Q 024414          175 IAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  221 (268)
Q Consensus       175 f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl  221 (268)
                      +.+.   |+++++++|++.|+++..++.....+....+|++||+||.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            6665   6889999999999999988877777766777899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.72  E-value=2.4e-16  Score=123.18  Aligned_cols=113  Identities=17%  Similarity=0.258  Sum_probs=83.8

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      |..+++|+.|.|+|++++++||+++|||+......    .  ..++..++   ...+.+....      ...+..|++|.
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~---~~~l~~~~~~------~~~~~~h~a~~   65 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPFG----P--FAVVKLDN---GVSLDFAQPD------GEIPPQHYAFL   65 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC----C--EEEEEcCC---CcEEEEecCC------CCCCcceEEEE
Confidence            56789999999999999999999999999875321    1  22333332   2345544321      12245699998


Q ss_pred             EC--CHHHHHHHHHHcCCeEeeCCccc------CCCCeEEEEEECCCCCEEEEEEe
Q 024414          177 VD--DVAKTVELIKAKGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       177 V~--Did~~~~~L~~~G~~i~~~p~~~------~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ++  |+++++++++++|+++..++...      ..++.+.+||+|||||.|||++.
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            87  69999999999999987665543      12346899999999999999987

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.2e-16  Score=120.89  Aligned_cols=117  Identities=25%  Similarity=0.306  Sum_probs=84.3

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCC--CCCCCCCeeEEEEEECCH
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD--KYDIGTGFGHFGIAVDDV  180 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~~~~g~g~~hi~f~V~Di  180 (268)
                      ||+|.|.|++++++||+++|||++..+..... +...+.+..... ..+.+.+.......  ......+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999987654222 222233332221 13455554432221  112345777999999999


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          181 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       181 d~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      ++++++++++|+++..++....  ..+.++++|||||.|||+|
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMP--YGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCC--CceEEEEECCCCCEEEEeC
Confidence            9999999999999988774433  3488999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.72  E-value=3.1e-16  Score=129.52  Aligned_cols=122  Identities=22%  Similarity=0.352  Sum_probs=88.6

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+|++|.|+|++++++||+++|||++......+.+.....|+......  ..+.+.....    ....++.|+||.|
T Consensus         4 i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~~~~----~~~~~~~hiaf~v   77 (166)
T cd09014           4 VRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKV--HDVAYTRDPA----GARGRLHHLAYAL   77 (166)
T ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCc--eeEEEecCCC----CCCCCceEEEEEC
Confidence            678999999999999999999999999987654333333334566554322  2333332111    1234688999999


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 DD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +|   +++++++|+++|+++..+|.....+..+.+|+.|||||.|||++..
T Consensus        78 ~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          78 DTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             CCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            86   5588899999999987666655544456799999999999999984

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.72  E-value=3.9e-16  Score=123.38  Aligned_cols=117  Identities=27%  Similarity=0.420  Sum_probs=89.1

Q ss_pred             eEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHH
Q 024414          102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA  181 (268)
Q Consensus       102 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did  181 (268)
                      +||+|.|+|++++++||+++||+++......+ +....+++..++...  .+.+....      ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHH--DLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcc--eEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            59999999999999999999999987654433 223456666654322  34443321      1467889999999864


Q ss_pred             ---HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          182 ---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       182 ---~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                         +++++++++|+++..++...+.+..+.++++|||||.|||++..+.
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence               7899999999999877766655556788999999999999987654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.72  E-value=3.9e-16  Score=119.73  Aligned_cols=114  Identities=25%  Similarity=0.237  Sum_probs=83.8

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCH
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV  180 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Di  180 (268)
                      +.||+|.|+|++++++||+++||+++..... +..  ..+++..++.   ..+.+.......  ....+..|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGGG---AVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCCc---cEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999875543 112  2344444431   122333221111  2234566999999999


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          181 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       181 d~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      ++++++|+++|+++..++...++ ..+.++++|||||.|+|+|
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            99999999999999888876664 4589999999999999985

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.71  E-value=2.4e-16  Score=122.25  Aligned_cols=115  Identities=26%  Similarity=0.362  Sum_probs=84.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+++|+.|.|+|++++++||+++|||++....+      ..+++..........+.+...       ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC-------CCCceeEEEEE
Confidence            46789999999999999999999999999875422      134454322222223333321       12468899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          177 VD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       177 V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      |.   |+++++++++++|+++...|.....+..+.+|+.|||||.||++..
T Consensus        68 v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          68 VRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            94   7999999999999998765444444445789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=4.3e-16  Score=120.43  Aligned_cols=118  Identities=29%  Similarity=0.458  Sum_probs=85.7

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC---CCCCCCCCeeEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV---DKYDIGTGFGHFG  174 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---~~~~~g~g~~hi~  174 (268)
                      +.+|+|+.|.|+|++++++||+++|||+.....+..  .  ...+..++    ..+++......   .....+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--G--RKALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--C--ceEEEeCC----EEEEEecCCCccCcCccCCCCCCceEE
Confidence            367999999999999999999999999987654321  1  23344432    23444432211   1222446788999


Q ss_pred             EEECC-HHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEE
Q 024414          175 IAVDD-VAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       175 f~V~D-id~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e  223 (268)
                      |.+++ +++++++++++|+++..++....+  +..+.+|++|||||.+|+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99975 999999999999998776654322  34578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.71  E-value=4.8e-16  Score=123.19  Aligned_cols=120  Identities=20%  Similarity=0.216  Sum_probs=84.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCc-eeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK-YTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      |+.+|+||+|.|+|++++++||+++||+++.......... ....++..++    ..+++.....    ....++.|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~----~~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGG----LWIAIMEGDS----LQERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCC----eEEEEecCCC----CCCCCceEEEE
Confidence            6789999999999999999999999999876543221100 0112222221    2344443211    12246789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          176 AVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       176 ~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      .|+  |+++++++|+++|+++..+ .+...+.++.+||+|||||.|||....
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecCC
Confidence            998  7999999999999987643 333344568999999999999998643

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.70  E-value=3.5e-16  Score=122.74  Aligned_cols=114  Identities=17%  Similarity=0.248  Sum_probs=84.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+|+||+|.|+|++++.+||+++|||++.....      ...|+..+...  ..+.+....        ++..|++|.
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~--~~i~l~~~~--------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARD--HTLVYIEGD--------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCcc--EEEEEEeCC--------CceEEEEEE
Confidence            46789999999999999999999999999864321      24566554322  234443211        345799999


Q ss_pred             ECC---HHHHHHHHHHcCCeEeeCCcccC--CCCeEEEEEECCCCCEEEEEEeCC
Q 024414          177 VDD---VAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       177 V~D---id~~~~~L~~~G~~i~~~p~~~~--~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |+|   +++++++++++|+++...+....  .+..+.+||+|||||.||++.+..
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~  121 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRPS  121 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEeee
Confidence            986   99999999999999876543221  233567899999999999987653

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.70  E-value=8.3e-16  Score=126.30  Aligned_cols=118  Identities=25%  Similarity=0.371  Sum_probs=82.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      .+|+||+|.|+|++++++||+++|||++......+.+.....++..+...+  .+.+...       .+.++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~--~i~l~~~-------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVH--DTALTGG-------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcc--eEEEecC-------CCCceeEEEEEcC
Confidence            579999999999999999999999999875443322333345554433222  2333221       2357889999998


Q ss_pred             C---HHHHHHHHHHcCCeE--eeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          179 D---VAKTVELIKAKGGKV--TREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       179 D---id~~~~~L~~~G~~i--~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      |   +++++++|+++|+..  ..++.....+..+.+|++|||||.||+++..
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            6   778889999999863  2333333323456799999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.70  E-value=6.1e-16  Score=126.74  Aligned_cols=118  Identities=19%  Similarity=0.215  Sum_probs=84.9

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC-CCCCCCeeEEEEEEC
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGIAVD  178 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f~V~  178 (268)
                      +|+||+|.|+|++++.+||+++|||++..+..   .  ...+...+. ..+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            58999999999999999999999999876543   1  223333221 1223566655322211 223357889999999


Q ss_pred             C---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          179 D---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       179 D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |   +++++++|+++|+.+.. +..  .+..+.+|++|||||.|||++..+
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~--~~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVD--RFYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-ccc--cccEEEEEEECCCCcEEEEEECCC
Confidence            8   89999999999997642 222  234578999999999999998764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1e-15  Score=119.18  Aligned_cols=118  Identities=25%  Similarity=0.420  Sum_probs=86.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC-CCCCCCCCeeEEEEEE
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-DKYDIGTGFGHFGIAV  177 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~f~V  177 (268)
                      ++|+||+|.|+|++++.+||+++|||++....+      ..+++..+.  ....+.+...... .......++.|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            479999999999999999999999999986622      134554433  2334555443222 1223445788999999


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          178 DD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       178 ~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      ++   +++++++++++|+++..+ ...  +..+.+|+.|||||.+||....+.
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~~--~~~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SDH--LVSEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-ccc--cceeEEEEECCCCCEEEEEEecCc
Confidence            74   899999999999987543 222  334789999999999999987663

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=4.1e-16  Score=121.14  Aligned_cols=113  Identities=19%  Similarity=0.229  Sum_probs=80.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEee----ccCCCCCCCCCCeeEEEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY----NYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~----~~~~~~~~~g~g~~hi~f  175 (268)
                      ++.|+.|.|+|++++++||+++||+++....+  .    .+.+..+     +.+.+..    .........+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTFEGG-----FALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEEecc-----ceeccchhhhccCCcccccccCCceEEEE
Confidence            68999999999999999999999999864322  1    1112111     1121111    000111122344569999


Q ss_pred             EECCHHHHHHHHHHcCC-eEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          176 AVDDVAKTVELIKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       176 ~V~Did~~~~~L~~~G~-~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      .|+|+++++++|+++|+ ++..++...++| .+.++++|||||.|||.++
T Consensus        71 ~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKLKRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHHHhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEecc
Confidence            99999999999999986 687787877765 5889999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.70  E-value=3.8e-16  Score=123.82  Aligned_cols=115  Identities=21%  Similarity=0.362  Sum_probs=82.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC-
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-  179 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D-  179 (268)
                      |+||+|.|+|++++++||+++||+++....+      ..+++..+.    ..+.+......+......++.|++|.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGG----TWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCc----eEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999865321      123444432    23444332221111223477899999984 


Q ss_pred             -HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          180 -VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       180 -id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                       +++++++++++|+++..++....+ ..+.+|++|||||.|||.+...
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~~  117 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGTL  117 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCcH
Confidence             999999999999998655443333 3578999999999999997653

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.70  E-value=8.1e-16  Score=119.64  Aligned_cols=114  Identities=21%  Similarity=0.314  Sum_probs=83.2

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      .+.+|+||+|.|+|++++.+||+++||+++..+.+      ..+++...+......+.+...       ...++.|++|.
T Consensus         3 ~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~   69 (121)
T cd09013           3 DIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWR   69 (121)
T ss_pred             CccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEEE
Confidence            36799999999999999999999999999876532      135554433212233444321       12478899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          177 VD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       177 V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      |+   |+++++++++++|+++...+...  +.+..+|++|||||.+|++...
T Consensus        70 v~~~~~v~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          70 ASSPEALERRVAALEASGLGIGWIEGDP--GHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             cCCHHHHHHHHHHHHHcCCccccccCCC--CCcceEEEECCCCCEEEEEEec
Confidence            97   58899999999999874332222  2346789999999999998654

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.70  E-value=6.7e-16  Score=119.67  Aligned_cols=120  Identities=23%  Similarity=0.306  Sum_probs=83.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC-ceeEEEEeeCCCCceEEEEEeeccCCCC--CCCCCCeeEEEEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-KYTNAFLGYGPEDSHFVIELTYNYGVDK--YDIGTGFGHFGIA  176 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~--~~~g~g~~hi~f~  176 (268)
                      +|+||+|.|.|++++++||+++|||++.......+. .....++..........+++........  .....++.|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            579999999999999999999999998876543221 1122333322111223466654322211  1233467899999


Q ss_pred             EC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          177 VD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       177 V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      |+   |+++++++++++|+++...+. .  ++.+.+|++||+||.|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVD-H--FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEe-e--cceEEEEEECCCCCEEEeC
Confidence            98   479999999999998865332 2  3468899999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.5e-16  Score=118.32  Aligned_cols=113  Identities=28%  Similarity=0.354  Sum_probs=82.0

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC-CCCCCCeeEEEEEECC
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGIAVDD  179 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f~V~D  179 (268)
                      |+|++|.|+|++++++||+++||++........   ....++..++.   ..+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            689999999999999999999999977543322   12345555432   2344443222211 1234567899999999


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEE
Q 024414          180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  221 (268)
Q Consensus       180 id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl  221 (268)
                      +++++++++++|+++..++.. .. +.+.+++.||+|+.|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~-~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GD-GVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CC-CccEEEEECCCCCEEeC
Confidence            999999999999998776544 23 35779999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.3e-15  Score=119.23  Aligned_cols=117  Identities=22%  Similarity=0.361  Sum_probs=86.1

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhc---CCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC---CCCCCCeeEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECL---GMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK---YDIGTGFGHF  173 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~---~~~g~g~~hi  173 (268)
                      +|+||+|.|+|++++.+||+++|   ||++.....  .   ...|... .  ....+.+........   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~---~~~~~~~-~--~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D---GRSWRAG-D--GGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c---CceEEec-C--CceEEEEEecccCCCcccccCCcCeeEE
Confidence            58999999999999999999999   999876542  1   1233322 1  234566665333221   1244678899


Q ss_pred             EEEECC---HHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEe
Q 024414          174 GIAVDD---VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       174 ~f~V~D---id~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +|.|+|   +++++++++++|+.+...+...  ..+..+.+|++|||||.+||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999974   8999999999999988776542  23456889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.69  E-value=9.6e-16  Score=137.25  Aligned_cols=149  Identities=50%  Similarity=0.767  Sum_probs=112.0

Q ss_pred             CCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCce
Q 024414           58 AAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY  137 (268)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~  137 (268)
                      ...+.+++||.+++... .                   .+..++.|+.|.|+|++++.+||+++|||++......++.+|
T Consensus       132 ~~~~~DPdG~~iEl~~~-~-------------------~~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~  191 (286)
T PLN02300        132 IAFVKDPDGYKFELIQR-G-------------------PTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKY  191 (286)
T ss_pred             EEEEECCCCCEEEEEeC-C-------------------CCCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccce
Confidence            34567788888876532 0                   112356788899999999999999999999986555445556


Q ss_pred             eEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCC
Q 024414          138 TNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY  217 (268)
Q Consensus       138 ~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~  217 (268)
                      ..+++.+++......+++........+..+++.+|++|.|+|+++++++++++|+++..+|...++.+.+.++++||||+
T Consensus       192 ~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~  271 (286)
T PLN02300        192 TIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGW  271 (286)
T ss_pred             EEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCC
Confidence            66766554332333466655444334455688999999999999999999999999999888887644578899999999


Q ss_pred             EEEEEEeCC
Q 024414          218 KFELLERGP  226 (268)
Q Consensus       218 ~iEl~e~~~  226 (268)
                      .++|++...
T Consensus       272 ~i~~~~~~~  280 (286)
T PLN02300        272 KTVFVDNID  280 (286)
T ss_pred             EEEEEccch
Confidence            999998754

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.69  E-value=6.5e-16  Score=120.22  Aligned_cols=119  Identities=33%  Similarity=0.547  Sum_probs=86.1

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC-CCceeEEEEeeCCCCceEEEEEeeccCCCC------CCCCCCeeEE
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYNYGVDK------YDIGTGFGHF  173 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~g~g~~hi  173 (268)
                      |+||+|.|+|++++.+||+++|||+........ ++....+++..+    ...+++..+.....      ...+.|..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            589999999999999999999999987655432 233445666543    24566654322111      1245788999


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCC--CCEEEEEE
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLE  223 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPd--G~~iEl~e  223 (268)
                      +|.|+|+++++++++++|+++..++.....++....++.|||  |+.|||+|
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999999887764444444444444555  99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=8.8e-16  Score=119.41  Aligned_cols=117  Identities=20%  Similarity=0.273  Sum_probs=80.2

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeec------cC--CCCCCCCCCeeE
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN------YG--VDKYDIGTGFGH  172 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~------~~--~~~~~~g~g~~h  172 (268)
                      +.|+.|.|+|++++++||+++|||+.......  ..+  ..+..+  ...+.+.....      ..  ........+..|
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHES--GDY--GELETG--ETTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCC--CcE--EEecCC--cEEEEEEcccccccccccCccCCccccCCCcEE
Confidence            46999999999999999999999998653221  111  112111  11111211110      00  011111223458


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          173 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ++|.|+|+++++++++++|+++..++...++| .+.++++|||||.||++++
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence            99999999999999999999998888777776 4778999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.69  E-value=1.3e-15  Score=123.04  Aligned_cols=114  Identities=22%  Similarity=0.410  Sum_probs=85.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      .+|+||.|.|+|++++++||+++|||++.....  +   ...|+..+....  .+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~--~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHH--SIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcc--eEEEccC-------CCCceEEEEEECC
Confidence            589999999999999999999999999865432  1   245666554332  3333321       1247889999999


Q ss_pred             CHHHHH---HHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          179 DVAKTV---ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       179 Did~~~---~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |++++.   ++|+++|+++..++.....+..+.+||+||+||.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            977775   899999999876655444444567899999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.5e-15  Score=118.01  Aligned_cols=116  Identities=21%  Similarity=0.231  Sum_probs=83.5

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC--CCCCCCeeEEEEEECCHHH
Q 024414          105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK--YDIGTGFGHFGIAVDDVAK  182 (268)
Q Consensus       105 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~--~~~g~g~~hi~f~V~Did~  182 (268)
                      .|.|+|++++++||+++||+++......+++....+.+..++  ..+.+..........  .....+..|++|.|+|+++
T Consensus         4 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~   81 (122)
T cd08355           4 TLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD--GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDA   81 (122)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC--EEEEEecCCCcccccccccCCCceEEEEEEECCHHH
Confidence            489999999999999999999987654333333334455442  223332222111110  1233456799999999999


Q ss_pred             HHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          183 TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       183 ~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      ++++++++|+++..++...++| .+.++++|||||.|+|.+
T Consensus        82 ~~~~l~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          82 HYERARAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEec
Confidence            9999999999999888887776 578999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.2e-15  Score=117.92  Aligned_cols=111  Identities=21%  Similarity=0.230  Sum_probs=80.9

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCC-----CCCCCCCeeEEEEEE
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD-----KYDIGTGFGHFGIAV  177 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-----~~~~g~g~~hi~f~V  177 (268)
                      +..|.|+|++++++||+++|||+.....+      ...++..++.  .+.+.+.......     ....+.++ |++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~-~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGL-ILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCC--ceEEEEccCCCCCCcchhcccCCceE-EEEEEE
Confidence            56799999999999999999999876421      1233433322  2445444321111     11223344 899999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          178 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       178 ~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      +|++++++++.++|+++..++...++| .+.++++|||||.|||+|
T Consensus        75 ~did~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERLKAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHHHhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            999999999999999988887777665 588999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.68  E-value=1.8e-15  Score=116.10  Aligned_cols=112  Identities=27%  Similarity=0.440  Sum_probs=85.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      ++|+||+|.|+|++++++||+++|||++....+      ..+++..+.. ..+.+.+....       ..+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~-------~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSED-DHHSLVLTEGD-------EPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCC-CcEEEEEEeCC-------CCCceeEEEEcC
Confidence            479999999999999999999999999886542      2356655422 22334443321       246789999998


Q ss_pred             ---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          179 ---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       179 ---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                         ++++++++++++|+++...+...++ +.+.+++.||+||.+|++...
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEcc
Confidence               6899999999999999877654443 457899999999999999763

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.68  E-value=1.2e-15  Score=118.69  Aligned_cols=112  Identities=19%  Similarity=0.257  Sum_probs=82.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC-
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD-  178 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~-  178 (268)
                      +|.||+|.|+|+++|++||+++|||++.....   .  ..+++..++.  .+.+.+....       ..++.|++|.++ 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---D--GALYLRMDDR--AWRIAVHPGE-------ADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC---C--CeEEEEccCC--ceEEEEEeCC-------CCceeEEEEEECC
Confidence            68999999999999999999999998764321   1  2455555433  3344443321       246779999997 


Q ss_pred             --CHHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEeC
Q 024414          179 --DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       179 --Did~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                        |+++++++|+++|+++...+...  ..+..+.+|++|||||.|||+...
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence              48999999999999987654322  234457899999999999998654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PRK06724 hypothetical protein; Provisional

Probab=99.67  E-value=1.8e-15  Score=119.79  Aligned_cols=114  Identities=18%  Similarity=0.236  Sum_probs=79.3

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhc---CCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeE
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECL---GMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH  172 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  172 (268)
                      +|..+|+||+|.|+|++++++||+++|   |++.....         .+   ..+.  ..+.+......  .....|..|
T Consensus         3 ~~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~---------~~---~~g~--~~l~l~~~~~~--~~~~~g~~h   66 (128)
T PRK06724          3 TLRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEV---------AY---STGE--SEIYFKEVDEE--IVRTLGPRH   66 (128)
T ss_pred             ccCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeE---------ee---eCCC--eeEEEecCCcc--ccCCCCcee
Confidence            367789999999999999999999966   66643211         11   1111  11222111110  112346789


Q ss_pred             EEEEE---CCHHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEEeC
Q 024414          173 FGIAV---DDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       173 i~f~V---~Did~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +||.|   +|+|+++++|+++|+++..+|...+.  ++.+.++|+|||||.||++..+
T Consensus        67 ~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         67 ICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            99998   67999999999999999877765432  3457899999999999998663

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.67  E-value=6.8e-15  Score=135.57  Aligned_cols=157  Identities=24%  Similarity=0.375  Sum_probs=110.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC----C--CCCCCeeEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK----Y--DIGTGFGHF  173 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~--~~g~g~~hi  173 (268)
                      +++||.|.|+|++++++||.+.|||+........... ..+.+..|    .+.+++..+.....    +  .+++|+.|+
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~i   76 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKDV   76 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEEE
Confidence            6899999999999999999999999998763222221 22333333    35566665432221    1  267899999


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC---------------------C----C
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------------T----P  228 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~---------------------~----~  228 (268)
                      ||.|+|++++++++.++|+++..+|.....|.....-+..+.|..+.|+++..                     .    -
T Consensus        77 af~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (353)
T TIGR01263        77 AFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGL  156 (353)
T ss_pred             EEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCCe
Confidence            99999999999999999999987765431123333334455555555554321                     0    1


Q ss_pred             CCceeEEEEcC--CHHHHHHHHHHhcCCeEeeeec
Q 024414          229 EPLCQVMLRVG--DLDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       229 ~~l~~v~L~v~--d~~~s~~FY~~vlG~~~~~~~~  261 (268)
                      ..++|+++.|.  |++++++||+++|||+.....+
T Consensus       157 ~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~  191 (353)
T TIGR01263       157 IAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFD  191 (353)
T ss_pred             EEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEE
Confidence            24899999998  9999999999999999876554

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.67  E-value=4.6e-15  Score=117.19  Aligned_cols=121  Identities=27%  Similarity=0.433  Sum_probs=85.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD  179 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  179 (268)
                      +|+||+|.|+|++++++||+++|||++....+.  .  ...++..+.. ....+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDPD-EHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecCC-CceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765432  1  2345554411 1234444443222111234578899999997


Q ss_pred             HH---HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          180 VA---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       180 id---~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      ++   +++++|.++|+++.....   .+..+.++++||+||.|||++..+..
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~---~~~~~~~~~~DP~G~~ie~~~~~~~~  124 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD---HGNAWSIYFRDPDGNRLELFVDTPWY  124 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC---CCceeEEEEECCCCCEEEEEEcCCCC
Confidence            55   588999999998765432   23357899999999999999877643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.67  E-value=2.1e-15  Score=121.42  Aligned_cols=113  Identities=22%  Similarity=0.283  Sum_probs=85.5

Q ss_pred             eEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC--
Q 024414          102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD--  179 (268)
Q Consensus       102 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D--  179 (268)
                      +||.|.|+|++++++||+++|||++......     ..+|+..........+.+..       ....++.|++|.|+|  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            5999999999999999999999998765321     35667644322222333221       124589999999986  


Q ss_pred             -HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          180 -VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       180 -id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                       +++++++|+++|+++..+|...+.++.+.+|++||+|+.|||.....
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence             45779999999999887777666566788999999999999987654

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=6e-15  Score=113.92  Aligned_cols=116  Identities=22%  Similarity=0.229  Sum_probs=84.9

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC--CCCCCCCCeeEEEEEECCHH
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DKYDIGTGFGHFGIAVDDVA  181 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~~~g~g~~hi~f~V~Did  181 (268)
                      ..|.|+|++++.+||+++||++.......+++......+..+.  .  .+.+......  .....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD--S--VLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC--E--EEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            3488999999999999999999987765444433334444443  1  3444432111  01123345679999999999


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          182 KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       182 ~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ++++++.++|+++..++...++| .+.++++|||||.|+|.+.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWG-DRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCccccccc-ceEEEEECCCCCEEEEecC
Confidence            99999999999998888766665 5889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.66  E-value=4.7e-15  Score=114.59  Aligned_cols=114  Identities=25%  Similarity=0.333  Sum_probs=82.7

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||+......    +  .+++..+.. ....+.+...       ..+++.|++|.|
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----G--IVYLRATGS-EHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----C--EEEEECCCC-ccEEEEeccC-------CCCCCceEEEEe
Confidence            3689999999999999999999999999865432    1  344543322 2223333221       123567999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCcccC-CCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~~-~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +   ++++++++++++|+++..++.... .++.+.+++.||+||.|||+...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence            4   689999999999999876654322 22357899999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.65  E-value=6.2e-15  Score=113.54  Aligned_cols=110  Identities=22%  Similarity=0.317  Sum_probs=80.2

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||++ |||+......      ..+++..+.... ..+.....       ..+++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDP-FVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCcc-EEEEcccC-------CcCcccEEEEEE
Confidence            46899999999999999999999 9999865422      134554432222 22222111       124778999999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          178 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       178 ~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +|.+++.+.++++|+.+...+. .+++ .+.++|.|||||.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APGG-GKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCCC-ceEEEEECCCCCEEEEEec
Confidence            9999999999999998765432 3443 5789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.65  E-value=4.6e-15  Score=133.51  Aligned_cols=156  Identities=17%  Similarity=0.241  Sum_probs=102.2

Q ss_pred             CCCcccccccCcccccccccccccccccccccChhHHhhh----cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC
Q 024414           57 RAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKK----DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI  132 (268)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  132 (268)
                      ++-++.+++||..++.....+...   .........|..+    ...+|+||+|.|+|++++++||+++|||++......
T Consensus       101 ~~~~~~DPdG~~iEl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~  177 (303)
T TIGR03211       101 RRVRFTLPSGHTMELYAEKEYVGE---LVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVL  177 (303)
T ss_pred             eEEEEECCCCCEEEEEEccccccc---cccccCCcccccccCCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEc
Confidence            567889999999988754222110   0011111112111    257899999999999999999999999998765433


Q ss_pred             CCCce-eEEEEeeCCCCceEEEEEeeccCCCCCCCCCC-eeEEEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeE
Q 024414          133 PEEKY-TNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG-FGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTV  207 (268)
Q Consensus       133 ~~~~~-~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g-~~hi~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~  207 (268)
                      +.+.. ...|+..+...+.  +.+...       .+.| +.|+||.|+|   +++++++|+++|+++..+|...+.+..+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~  248 (303)
T TIGR03211       178 GDGKEQAAAWLSVSNKAHD--IAFVGD-------PEPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQ  248 (303)
T ss_pred             CCCcEEEEEEEEcCCCCcc--cceecC-------CCCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCce
Confidence            33222 2345544332211  222111       1234 8899999996   5567889999999988777655443457


Q ss_pred             EEEEECCCCCEEEEEEe
Q 024414          208 IAFIEDPDGYKFELLER  224 (268)
Q Consensus       208 ~~~~~DPdG~~iEl~e~  224 (268)
                      .+||+|||||.||++..
T Consensus       249 ~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       249 TIYFFDPSGNRNETFGG  265 (303)
T ss_pred             EEEEECCCCCEEEEecC
Confidence            89999999999999843

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.65  E-value=5.1e-15  Score=112.15  Aligned_cols=108  Identities=26%  Similarity=0.311  Sum_probs=77.1

Q ss_pred             EEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHHH
Q 024414          106 YRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVE  185 (268)
Q Consensus       106 l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~~  185 (268)
                      |.|+|++++++||+++|||++....+      ..+.+..+.....-...+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            67999999999999999999988433      1233333311000012222211  122335577899999999999999


Q ss_pred             HHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          186 LIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       186 ~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      +++++|+++..+|...++| .+.+++.|||||.|||+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            9999999998888887665 68999999999999986

...

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.1e-14  Score=111.52  Aligned_cols=109  Identities=22%  Similarity=0.263  Sum_probs=79.7

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHH
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKT  183 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~  183 (268)
                      ..|.|+|++++++||+++|||++....    +  ...++..+.. ....+.+.....     .+....|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH----G--WIATFASPQN-MTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC----C--ceEEEeecCC-CCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            458999999999999999999986421    1  2334433322 223444443211     112345999999999999


Q ss_pred             HHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          184 VELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       184 ~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +++++++|+++..++...++| .+.+++.|||||.|+|++++
T Consensus        72 ~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~i~~~~~~  112 (112)
T cd07238          72 LARAVAAGFAIVYGPTDEPWG-VRRFFVRDPFGKLVNILTHR  112 (112)
T ss_pred             HHHHHhcCCeEecCCccCCCc-eEEEEEECCCCCEEEEEEcC
Confidence            999999999998877766664 57899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1.1e-14  Score=113.22  Aligned_cols=114  Identities=25%  Similarity=0.301  Sum_probs=79.4

Q ss_pred             eeEEEEEeCCHHHHHHHHHhh---cCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414          101 MLHVVYRVGDLDRTIKFYTEC---LGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      |+||.|.|+|++++++||+++   ||++......  + .  .+++..+...  ..+.+......... ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~-~--~~~~~~~~~~--~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P-G--AVGYGKGGGG--PDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C-c--eeEeccCCCC--ceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   6998865431  1 1  2233322222  33444432221111 223346999999


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEE
Q 024414          178 DD---VAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       178 ~D---id~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~  222 (268)
                      +|   ++++++++.++|+.+..+|...++  +..+.+|++|||||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            87   788999999999998877766553  3446789999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.63  E-value=8e-15  Score=114.18  Aligned_cols=109  Identities=28%  Similarity=0.469  Sum_probs=78.9

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE--
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV--  177 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V--  177 (268)
                      +|+||.|.|+|++++.+||+++|||++....+  +    ..++..+.  ..+.+.+....     ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~~--~~~~l~~~~~~-----~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAGD--LWLCLSVDANV-----GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecCC--EEEEEecCCCC-----CCCCCeeeEEEEeCH
Confidence            58999999999999999999999999875432  1    23444332  22223222111     1235677999998  


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +|+++++++++++|+++..++..    ..+.+||.|||||.|||+...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC----CccEEEEECCCCCEEEEEeCC
Confidence            57999999999999987654332    136799999999999999654

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1.2e-14  Score=112.37  Aligned_cols=114  Identities=27%  Similarity=0.396  Sum_probs=80.8

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCC------CCCCCCCeeEEE
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD------KYDIGTGFGHFG  174 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~------~~~~g~g~~hi~  174 (268)
                      |.||+|.|.|++++++||+++|||++..+.   ++  ..+++..++. .  .+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~--~~~~l~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DR--RLAFFWVGGR-G--MLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CC--ceEEEEcCCC-c--EEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            468999999999999999999999987641   11  2355555543 2  23333321110      111234778999


Q ss_pred             EEEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          175 IAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       175 f~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      |.++  |++++++++.++|+++...+. . .++.+.+++.|||||.||++++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~-~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-W-PRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-C-CCCeeEEEEECCCCCEEEEecC
Confidence            9984  799999999999998866543 2 2345789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.63  E-value=1.2e-14  Score=130.00  Aligned_cols=158  Identities=20%  Similarity=0.275  Sum_probs=103.4

Q ss_pred             cCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-
Q 024414           56 LRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-  134 (268)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-  134 (268)
                      .++..+.+++||.+++-+..... .......+.....+ .....+|+||+|.|+|++++.+||+++|||++......+. 
T Consensus       100 ~~~~~f~DPdGn~lEl~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~  177 (286)
T TIGR03213       100 LGLIKFTDPGGNPLEIYYGAVED-FEKPFVSPRAVSGF-VTGDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAG  177 (286)
T ss_pred             eEEEEEECCCCCEEEEEEccccc-CCCCCCCCCCCCcc-ccCCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCC
Confidence            34678899999999875431110 00000000000012 2336799999999999999999999999999876532211 


Q ss_pred             -C-ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH---HHHHHHHcCCeEeeCCcccCCCCeEEE
Q 024414          135 -E-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIA  209 (268)
Q Consensus       135 -~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~---~~~~L~~~G~~i~~~p~~~~~G~~~~~  209 (268)
                       + .+..+|+..++..+.  +.+...      ....++.|++|.|+|+++   ++++|+++|+ ....+...+.+..+.+
T Consensus       178 ~g~~~~~~~l~~~~~~~~--~~l~~~------~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~  248 (286)
T TIGR03213       178 PGVTVRPYFLHCNERHHS--LAFAAG------PSEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSF  248 (286)
T ss_pred             CCCcceEEEEEECCCcce--EEEecC------CCCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEE
Confidence             1 123566665543332  333221      124578899999998776   8999999999 5445554444567889


Q ss_pred             EEECCCCCEEEEEEe
Q 024414          210 FIEDPDGYKFELLER  224 (268)
Q Consensus       210 ~~~DPdG~~iEl~e~  224 (268)
                      |++||+|+.||+...
T Consensus       249 y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       249 YVATPSGWLVEYGWG  263 (286)
T ss_pred             EEECCCCcEEEeecC
Confidence            999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.62  E-value=1.1e-14  Score=111.37  Aligned_cols=109  Identities=25%  Similarity=0.411  Sum_probs=77.4

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC--CH
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--DV  180 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~--Di  180 (268)
                      ||.|.|+|++++++||+++||++...+.+      ...++..+.    ..+.+.......  ..+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~----~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAG----LWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecC----eEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999865432      123444331    234443322111  12346779999995  79


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          181 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       181 d~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ++++++++++|+++........ +..+.+|++|||||.||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQ-GEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccC-CCceEEEEECCCCCEEEEEeC
Confidence            9999999999999864432222 235789999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=2.2e-14  Score=111.12  Aligned_cols=112  Identities=28%  Similarity=0.437  Sum_probs=79.0

Q ss_pred             eEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC--
Q 024414          102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD--  179 (268)
Q Consensus       102 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D--  179 (268)
                      .||.|.|+|++++.+||+++||++.....+    . ...|. ....  .+.+.+......    ..+++.|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~-~~~~~-~~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----D-YAKFL-LEDP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----C-eeEEE-ecCC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            599999999999999999999998765422    1 12232 2222  233333322111    11578899999987  


Q ss_pred             -HHHHHHHHHHcCCeEeeCCcccC-CCCeEEEEEECCCCCEEEEEEeC
Q 024414          180 -VAKTVELIKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       180 -id~~~~~L~~~G~~i~~~p~~~~-~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                       ++++++++.++|+++..++.... .+..+.+|++||+||.|||+.+.
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999876654332 22357799999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=1.4e-14  Score=112.54  Aligned_cols=113  Identities=25%  Similarity=0.381  Sum_probs=75.3

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC---C-C-CCCCCCeeEEE--E
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV---D-K-YDIGTGFGHFG--I  175 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~---~-~-~~~g~g~~hi~--f  175 (268)
                      ||+|.|+|++++++||+++||+++.....    .  .+.+..+  +..+.+.+......   . . .....+..|++  |
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----T--WVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----C--ccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999864321    0  1222222  22333433321100   0 0 11122445665  5


Q ss_pred             EECCHHHHHHHHHHcCCeEeeCCccc---CCCCeEEEEEECCCCCEEEEEE
Q 024414          176 AVDDVAKTVELIKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       176 ~V~Did~~~~~L~~~G~~i~~~p~~~---~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      .++|+++++++|+++|+++..+|...   ..++.+.+|++|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            66899999999999999998766532   2234688999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.61  E-value=2.9e-14  Score=106.54  Aligned_cols=112  Identities=34%  Similarity=0.428  Sum_probs=83.6

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK  182 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~  182 (268)
                      |+++.|+|++++.+||+++||++.......  ......++..+    ...+++...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            899999999999999999999998876542  11234455443    235666553332222345678899999999999


Q ss_pred             HHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEE
Q 024414          183 TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  221 (268)
Q Consensus       183 ~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl  221 (268)
                      +++++.++|+.+...+... .++.+.+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREE-PWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCC-CCCcEEEEEECCCCcEEeC
Confidence            9999999999887665422 3346889999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.60  E-value=4.3e-14  Score=107.45  Aligned_cols=109  Identities=28%  Similarity=0.363  Sum_probs=79.1

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHH
Q 024414          105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTV  184 (268)
Q Consensus       105 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~  184 (268)
                      .|.|+|++++++||+++|||++.....  ..  ..+++..+    ...+.+......... ...+..|++|.|+|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            489999999999999999999876543  11  23444433    234555443222111 2345669999999999999


Q ss_pred             HHHHHcCCe-EeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          185 ELIKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       185 ~~L~~~G~~-i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      ++++++|++ +..++...++| .+.+++.||+|+.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWG-MREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcc-cEEEEEECCCCCEEEecC
Confidence            999999998 55565555554 578999999999999985

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.60  E-value=2.3e-14  Score=111.28  Aligned_cols=113  Identities=18%  Similarity=0.185  Sum_probs=77.2

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeecc-----CCCCCCCCCCeeEEEE
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY-----GVDKYDIGTGFGHFGI  175 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~-----~~~~~~~g~g~~hi~f  175 (268)
                      |+||+|.|+|+++|++||+. |||++.......    ..+.+..++ +  +.+.+....     .......+.+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~----~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE----PHVEAVLPG-G--VRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC----CcEEEEeCC-C--EEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            58999999999999999975 999976432211    122233322 1  223222110     0001112234558888


Q ss_pred             EEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          176 AVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       176 ~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      .+.   |+++++++|+++|+++..++...++| .+.++++|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWG-QRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCC-CEEEEEECCCCCEEEEe
Confidence            875   89999999999999988888777776 47789999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.60  E-value=3.1e-14  Score=127.48  Aligned_cols=158  Identities=21%  Similarity=0.237  Sum_probs=104.0

Q ss_pred             cCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC
Q 024414           54 FGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP  133 (268)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~  133 (268)
                      .+.++.++.+++||.+++.............     ...+..-...+|+||+|.|+|++++++||+++||+++......+
T Consensus        95 ~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~-----~~~~~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~  169 (294)
T TIGR02295        95 GQPEALRVEDPFGYPIEFYFEMEKVERLLRR-----YHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDD  169 (294)
T ss_pred             CCceEEEEECCCCCEEEEEEchhhccccccc-----ccccCCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccC
Confidence            3446788999999999986532211110000     00000113678999999999999999999999999987654433


Q ss_pred             CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC---HHHHHHHHHHcCCe--EeeCCcccCCCCeEE
Q 024414          134 EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGK--VTREPGPVKGGNTVI  208 (268)
Q Consensus       134 ~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---id~~~~~L~~~G~~--i~~~p~~~~~G~~~~  208 (268)
                      .+.....|+..+...+  .+.+..       ..+.++.|+||.|+|   +++++++|+++|++  +...|.....+..+.
T Consensus       170 ~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~  240 (294)
T TIGR02295       170 EGNLAAAWLHRKGGVH--DIALTN-------GNGPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFF  240 (294)
T ss_pred             CCcEEEEEEecCCCcC--ceEeec-------CCCCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceE
Confidence            3333344554332222  223221       123688999999998   55678999999987  555555444444577


Q ss_pred             EEEECCCCCEEEEEEeC
Q 024414          209 AFIEDPDGYKFELLERG  225 (268)
Q Consensus       209 ~~~~DPdG~~iEl~e~~  225 (268)
                      +|++||+||.||+++..
T Consensus       241 ~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       241 LYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EEEECCCCCEEEEEecc
Confidence            99999999999998754

The enzyme from Bacillus brevis contains manganese.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=3.3e-14  Score=109.02  Aligned_cols=108  Identities=27%  Similarity=0.367  Sum_probs=78.7

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC-CCCCCCeeEEEEEECC---
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGIAVDD---  179 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f~V~D---  179 (268)
                      |.|.|+|++++++||+++||+++....+    .+  +.+..++ .  ..+.+........ .....+..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~--~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TF--ALFVLGS-G--VKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ce--EEEEeCC-C--cEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            6799999999999999999999765321    12  2333322 1  3455554332211 1223467799999985   


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       180 id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      ++++++++.++|+++..++...++|  +.++++|||||.|||+
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCc--cEEEEECCCCCEEEee
Confidence            8899999999999998888777665  5789999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.58  E-value=5.5e-14  Score=107.94  Aligned_cols=108  Identities=22%  Similarity=0.323  Sum_probs=73.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeE--EEEE
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH--FGIA  176 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h--i~f~  176 (268)
                      .+|+||+|.|.|++++++||+ +|||++....+      ...+...+..  ...+.+....       ..++.|  +.+.
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEGD------GLELRTAGND--HRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------ceEEEecCCC--ceEEEeecCC-------CCceeeEEEEeE
Confidence            368999999999999999997 69999865421      1223322222  2223333211       123444  4555


Q ss_pred             ECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          177 VDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       177 V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      ++|+++++++|+++|+++..++  .++ ..+.+||.|||||.|||....
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~-~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGA-DPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcC-CCCEEEEECCCCCEEEEecCC
Confidence            6899999999999999987654  222 235689999999999998543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=4.2e-14  Score=110.39  Aligned_cols=113  Identities=24%  Similarity=0.227  Sum_probs=77.8

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC-----CCC--CCCCCCeeEE
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-----VDK--YDIGTGFGHF  173 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~-----~~~--~~~g~g~~hi  173 (268)
                      +.+|.|.|+|++++++||++ |||+.......+.    .+++..++   ...+.+.....     ...  ...+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            35788999999999999987 9999775333222    12233332   13344433110     000  0123455699


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          174 GIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       174 ~f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      +|.|+   |+++++++++++|+++..+|...++  .+.+|++|||||.|||+.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            99998   5889999999999999887776654  467899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.58  E-value=5.4e-14  Score=110.10  Aligned_cols=121  Identities=29%  Similarity=0.414  Sum_probs=88.6

Q ss_pred             cccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCC-CCceEEEEEeeccCCCCC
Q 024414           86 AHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP-EDSHFVIELTYNYGVDKY  164 (268)
Q Consensus        86 ~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~~~lel~~~~~~~~~  164 (268)
                      ...+.+.|++          |.|+|++++++||.++|||+.....+..+..|  ..+..+. ..... +  ...   ...
T Consensus         5 ~~~~~i~w~E----------i~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y--~~f~~~~~~~gG~-l--~~~---~~~   66 (127)
T COG3324           5 GEKGTIVWFE----------LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRY--AVFPADGAGAGGG-L--MAR---PGS   66 (127)
T ss_pred             ccCCccEEEe----------eecCCHHHHHHHHHHhhCceecccccCCCceE--EEEECCCccccce-e--ccC---CcC
Confidence            3455667777          99999999999999999999887765543333  2232222 21222 1  111   111


Q ss_pred             CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          165 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       165 ~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      ..+.+.+++.|.|+|+|+..+++.++|++++.++.+.+++ ++.+.+.||+||.|.|+++.
T Consensus        67 ~p~~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          67 PPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CCCCCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeecC
Confidence            1224556899999999999999999999999999999864 68899999999999999754

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.57  E-value=1e-13  Score=107.69  Aligned_cols=107  Identities=22%  Similarity=0.199  Sum_probs=75.1

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHH
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKT  183 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~  183 (268)
                      ..|.|+|++++++||++ |||++....+.   .  .+++..++    ..+.+.......   ......|++|.|+|++++
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~~   72 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRGD----LELHFFAHPDLD---PATSPFGCCLRLPDVAAL   72 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcCC----EEEEEEecCcCC---CCCCcceEEEEeCCHHHH
Confidence            45899999999999999 99998754331   1  23343332    245554322111   112345899999999999


Q ss_pred             HHHHHHcCCeEe-------eCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          184 VELIKAKGGKVT-------REPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       184 ~~~L~~~G~~i~-------~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +++|+++|+++.       .++...++| .+.++++|||||.|+|+|.
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPPEDQPWG-MREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHhCccccccCCCcccCCcCCCCc-eeEEEEECCCCCEEEeecC
Confidence            999999999743       233434444 6889999999999999974

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.56  E-value=4.3e-14  Score=108.49  Aligned_cols=95  Identities=29%  Similarity=0.352  Sum_probs=78.1

Q ss_pred             eEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCC--CCCCCeeEEEEEECC
Q 024414          102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY--DIGTGFGHFGIAVDD  179 (268)
Q Consensus       102 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~--~~g~g~~hi~f~V~D  179 (268)
                      +||+|.|+|+++|++||+++||++.......+..+.+..++..+++.  +.+|+.++......  ..+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999987776666667777888777533  67888886554332  377899999999999


Q ss_pred             HHHHHHHHHHcCCeEeeCC
Q 024414          180 VAKTVELIKAKGGKVTREP  198 (268)
Q Consensus       180 id~~~~~L~~~G~~i~~~p  198 (268)
                      ++++.++|+++|+++..++
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999987654

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=5.5e-13  Score=102.89  Aligned_cols=103  Identities=23%  Similarity=0.297  Sum_probs=71.7

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHH
Q 024414          105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTV  184 (268)
Q Consensus       105 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~  184 (268)
                      .|.|+|++++++||++ |||++....+      ..+++..+.  .  .+.+..... ...   .+..+++|.|+|+++++
T Consensus         6 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~--~--~l~l~~~~~-~~~---~~~~~~~~~v~did~~~   70 (113)
T cd08356           6 FIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGN--C--AFYLQDYYV-KDW---AENSMLHLEVDDLEAYY   70 (113)
T ss_pred             ccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCC--E--EEEeecCCC-ccc---ccCCEEEEEECCHHHHH
Confidence            4889999999999988 9999986532      134555432  2  233322111 111   22347899999999999


Q ss_pred             HHHHHcCCeEe-----eCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          185 ELIKAKGGKVT-----REPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       185 ~~L~~~G~~i~-----~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      ++|+++|+++.     .++...++| .+.++++|||||.|+|.|
T Consensus        71 ~~l~~~G~~~~~~~~~~~~~~~~~g-~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          71 EHIKALGLPKKFPGVKLPPITQPWW-GREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHcCCcccccceecCccccCCC-cEEEEEECCCccEEEeeC
Confidence            99999998743     233444454 589999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=1.3e-12  Score=100.66  Aligned_cols=110  Identities=25%  Similarity=0.338  Sum_probs=76.3

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC------CCCCCCCCCeeEEEEEE
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG------VDKYDIGTGFGHFGIAV  177 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~------~~~~~~g~g~~hi~f~V  177 (268)
                      |.|.|+|++++.+||+++|||++....   ..  ...++..+.    ..+.+.....      ......+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLGG----LVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcCC----eEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            679999999999999999999987551   11  134444321    3455543211      11111222333566655


Q ss_pred             ---CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          178 ---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       178 ---~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                         +|++++++++++.|+++..++...++| .+.++++||+||.|||..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWG-GYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCC-ceEEEEECCCCCEEEEee
Confidence               579999999999999998777666654 688999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.46  E-value=5.9e-12  Score=116.71  Aligned_cols=160  Identities=22%  Similarity=0.317  Sum_probs=116.3

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC--ceeEEEEeeCCCCceEEEEEeeccCC-----------------
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGV-----------------  161 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~-----------------  161 (268)
                      ++||.++|.|.+++..||+..|||+.+.+.....+  ......++-|    .+.+.+..+...                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g----~i~fv~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG----DLVFLFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC----CEEEEEeCCCCCccccccccccccccccc
Confidence            68999999999999999999999999876653222  2223334433    234444433111                 


Q ss_pred             --CC----C--CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC----CCeEEEEEECCCCCEEEEEEeCC---
Q 024414          162 --DK----Y--DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG----GNTVIAFIEDPDGYKFELLERGP---  226 (268)
Q Consensus       162 --~~----~--~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~----G~~~~~~~~DPdG~~iEl~e~~~---  226 (268)
                        ..    +  .+|.|+..|+|+|+|++++++++.++|++...+|....+    |.....-+.-+.|..+.|+++..   
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~  156 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDG  156 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCC
Confidence              00    1  267899999999999999999999999998777665422    23455557778888888887531   


Q ss_pred             ------------C--------CCCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCC
Q 024414          227 ------------T--------PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE  264 (268)
Q Consensus       227 ------------~--------~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~  264 (268)
                                  .        ...++|++++|.+++.++.||+++|||+..+..+.++
T Consensus       157 ~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~  214 (398)
T PLN02875        157 AKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAED  214 (398)
T ss_pred             CccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeecccc
Confidence                        0        1258999999999999999999999999887665543

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.45  E-value=1.6e-12  Score=103.74  Aligned_cols=119  Identities=31%  Similarity=0.399  Sum_probs=80.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCC--------C-CCC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYD--------I-GTG  169 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~--------~-g~g  169 (268)
                      .++.|+.+.+++..+..+||..+||++.....+.+..+.. +++....    -.+|+.++.+.....        . +.|
T Consensus        41 tr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~----~~~ELthn~Gtes~~~~~~~ngN~~prG  115 (170)
T KOG2944|consen   41 TRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRN----AKLELTHNWGTESPPDQAYLNGNKEPRG  115 (170)
T ss_pred             hhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEeccc----CceeeecCCCCCCCcchhhcCCCCCCCc
Confidence            4666677777777777777777777765443332222222 4443332    257777765543221        2 249


Q ss_pred             eeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          170 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ++||||.|+|++++.++++++|+++...+.+...  ...+|+.||||+.||+..+
T Consensus       116 fgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~--K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  116 FGHICIEVDDINSACERLKEKGVRFKKKLKDGKM--KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             cceEEEEeCCHHHHHHHHHHhCceeeecCCCccc--cceeEEECCCCCeEEEeec
Confidence            9999999999999999999999998766554433  2678999999999999754

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.35  E-value=9.9e-12  Score=105.05  Aligned_cols=101  Identities=27%  Similarity=0.380  Sum_probs=76.5

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecCCC--CceeEEEEeeCCCCceEEEEEeeccCC--CC-------CC
Q 024414           99 RRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPE--EKYTNAFLGYGPEDSHFVIELTYNYGV--DK-------YD  165 (268)
Q Consensus        99 ~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~--~~-------~~  165 (268)
                      .+|+||++.|+  |++++++||+++|||+........+  .+.....+..+.  ..+.+++..+...  ..       ..
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHh
Confidence            57999999999  9999999999999999887665433  234445554432  3567777764331  11       12


Q ss_pred             CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCccc
Q 024414          166 IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPV  201 (268)
Q Consensus       166 ~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~  201 (268)
                      .+.|++||||.|+|+++++++|+++|+++...|...
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~~y  115 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAALRARGVEFLPIPDNY  115 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHcCCeeccCchhh
Confidence            478999999999999999999999999998776543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.31  E-value=5.2e-12  Score=111.05  Aligned_cols=165  Identities=21%  Similarity=0.357  Sum_probs=119.7

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC--ceeEEEEeeCCCCceEEEEEeeccCCCC-----CCCCCCe
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVDK-----YDIGTGF  170 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~-----~~~g~g~  170 (268)
                      ..+++||.+.|.|...+..||+..|||+.....+.+.+  ......++.|  ...+.+.-..++....     ..+|.|+
T Consensus        15 ~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g--~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   15 FLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG--KIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             eeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC--CEEEEEecCCCCCchhhhhhhhhcccch
Confidence            56899999999999999999999999998775533221  1111222222  1122222222222111     1266788


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEEeCCC---------------------
Q 024414          171 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT---------------------  227 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e~~~~---------------------  227 (268)
                      -.+||+|+|.+++.+.+.++|+++..+|.++.+  |-.+.+.+..+......++|+...                     
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l~  172 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKLP  172 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCCC
Confidence            889999999999999999999999888776643  556778888887777778876621                     


Q ss_pred             ---CCCceeEEEEcC--CHHHHHHHHHHhcCCeEeeeecCCC
Q 024414          228 ---PEPLCQVMLRVG--DLDRSINFYEQAFGMELLRKRDNPE  264 (268)
Q Consensus       228 ---~~~l~~v~L~v~--d~~~s~~FY~~vlG~~~~~~~~~p~  264 (268)
                         ...++|++.++.  +++.+.+||.+.+||.-.+..++++
T Consensus       173 ~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~  214 (381)
T KOG0638|consen  173 KGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQ  214 (381)
T ss_pred             ccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcch
Confidence               135799999996  8999999999999999888877764

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.23  E-value=1.4e-10  Score=87.80  Aligned_cols=119  Identities=26%  Similarity=0.285  Sum_probs=81.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC--CCCCC--CeeE--
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK--YDIGT--GFGH--  172 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~--~~~g~--g~~h--  172 (268)
                      ..+-|++|.|.|++++++||.++||++.-...+        .|+.+.-.++.+.+.+........  ...+.  -+.|  
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfG   74 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFG   74 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccce
Confidence            346799999999999999999999998654432        344444444556565554321111  11111  2224  


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEeeCCccc---CCCCeEEEEEECCCCCEEEEEEeC
Q 024414          173 FGIAVDDVAKTVELIKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~~G~~i~~~p~~~---~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +.+.++|--++.++|.++|+....+|...   .-|+.+.+++.||.||.+|+-.-+
T Consensus        75 vVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          75 VVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             EEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence            45667788899999999998886666532   226788999999999999997543

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.14  E-value=2.6e-09  Score=84.16  Aligned_cols=111  Identities=14%  Similarity=0.173  Sum_probs=74.7

Q ss_pred             EEEe-CCHHHHHHHHHhhcCCEEEEEecCC----------CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEE
Q 024414          105 VYRV-GDLDRTIKFYTECLGMKLLRKRDIP----------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHF  173 (268)
Q Consensus       105 ~l~V-~Dle~a~~FY~~vLG~~~~~~~~~~----------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  173 (268)
                      .|.+ .|.++|++||+++||+++......+          .+.+..+.+..++    ..+.+...........+ +-.++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g----~~l~~~d~~~~~~~~~~-~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGG----QRLMASDGGPGFPFTFG-NGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECC----EEEEEEcCCCCCCCCCC-CCEEE
Confidence            4667 8999999999999999998765321          1223344455443    13333332211111122 23478


Q ss_pred             EEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          174 GIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       174 ~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      ++.|+|   +++++++|.+.| ++..++...++| .+..+++||+|+.|+|.
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWS-PLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCcc-cccEEEECCCCCEEEeC
Confidence            999986   778889986655 888888887776 57899999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.12  E-value=3.4e-10  Score=104.41  Aligned_cols=127  Identities=22%  Similarity=0.364  Sum_probs=86.5

Q ss_pred             CceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecCCC--CceeEEEEeeCCCCceEEEEEeeccCC--C-------CC
Q 024414           98 KRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPE--EKYTNAFLGYGPEDSHFVIELTYNYGV--D-------KY  164 (268)
Q Consensus        98 ~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~--~-------~~  164 (268)
                      ..+|+||++.|+  |++++++||+++|||+.....+...  .+.....+...  ...+.+++..+...  .       ..
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~--~g~~~i~L~ep~~~~~~s~i~~fl~~  233 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASP--DGKVKIPLNEPASGKDKSQIEEFLEF  233 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECC--CCcEEEEEeccCCCCCCCHHHHHHHH
Confidence            568999999999  9999999999999999887655322  22222233222  23466777763211  1       12


Q ss_pred             CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC------C-----------CeEEEEEECCCCCEEEEEEeCC
Q 024414          165 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG------G-----------NTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       165 ~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~------G-----------~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ..+.|++||||.|+|+++++++|+++|+.+...|..+-.      +           .....+=.|.+|..+.++.++-
T Consensus       234 ~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~yY~~l~~r~~~~~~~~~~~l~~~~iL~D~d~~g~llqift~~~  312 (353)
T TIGR01263       234 YNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPDTYYDLLGERLGGHVKEDLDTLRELNILIDGDEDGYLLQIFTKPL  312 (353)
T ss_pred             cCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCHHHHHHHHHHhcccccchHHHHHHCCEEEecCCCceEEEEeccCC
Confidence            247899999999999999999999999998876632211      0           0012334567777777776654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.10  E-value=6.8e-09  Score=82.61  Aligned_cols=117  Identities=20%  Similarity=0.178  Sum_probs=87.2

Q ss_pred             EEEeC-CHHHHHHHHHhhcCCEEEEEecCCC----------CceeEEEEeeCCCCceEEEEEeeccCCCCCCCCC-CeeE
Q 024414          105 VYRVG-DLDRTIKFYTECLGMKLLRKRDIPE----------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGT-GFGH  172 (268)
Q Consensus       105 ~l~V~-Dle~a~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~-g~~h  172 (268)
                      -|..+ |-++|++||+++||.++.......+          +..-.+.+..++    ..|.+...........++ --.-
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g----~~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGG----STIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECC----EEEEEecCCCccCcccCCCeeEE
Confidence            36778 9999999999999999988776655          455566666653    234444322222222222 2335


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          173 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |.+.++|++++++++.+.|+++..+.++..+| .+...++||.|+.|.|.....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG-~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFWG-DRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCcc-cceEEEECCCCCEEEEecCcc
Confidence            78888999999999999999999999999887 578999999999999986654

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.08  E-value=4.7e-10  Score=85.95  Aligned_cols=122  Identities=26%  Similarity=0.424  Sum_probs=74.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCce---eEEEEeeCCCCceEEEE--------EeeccCCC-CCCC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY---TNAFLGYGPEDSHFVIE--------LTYNYGVD-KYDI  166 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~---~~~~l~~g~~~~~~~le--------l~~~~~~~-~~~~  166 (268)
                      .+++||++.|+|++++++||+++||++............   ...+.............        ........ ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            368999999999999999999999999987665433221   11111111000000000        00000000 0001


Q ss_pred             C-CCeeEEEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          167 G-TGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       167 g-~g~~hi~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      + .+..|+++.++|   .......+...|..+..... ..++  ..+|++||||+.+|+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~--~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGG--VHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcc--eEEEEECCCCcEEEeeC
Confidence            1 246799999998   66777777778888755433 2222  27999999999999974

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.04  E-value=2.5e-09  Score=82.32  Aligned_cols=118  Identities=25%  Similarity=0.289  Sum_probs=78.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeec--cC----CCCCCCCCCeeEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN--YG----VDKYDIGTGFGHF  173 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~--~~----~~~~~~g~g~~hi  173 (268)
                      ++--|.|.|+|++++.+||+. |||+....+..+.    ...+-.++.  .+++-|.+.  ..    .........-.-+
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~----a~~mi~~~n--i~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED----AACMIISDN--IFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc----ceeEEEecc--EEEEEeccHHhhhhcccccccccCCceEEE
Confidence            345678999999999999997 9999887665432    233333332  222222221  00    0111122234468


Q ss_pred             EEEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          174 GIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       174 ~f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      +|.+.   .+|++++++.++|++...++.+.  |..+...|.|||||.||+..-.+
T Consensus        76 ~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~--gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          76 SLSAGSREEVDELVDKALEAGGKPANEPQDE--GFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             EeccCcHHHHHHHHHHHHHcCCCCCCCcccc--ccccceeeeCCCCCeEEEEEeCH
Confidence            88886   48999999999999997776665  34566789999999999987654

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.99  E-value=2.3e-09  Score=91.17  Aligned_cols=120  Identities=40%  Similarity=0.670  Sum_probs=89.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD  179 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  179 (268)
                      .+..|.+.|.|++++++||.+.||+++..+    ++.+..+.++++++.  ..+|+....+...+..+.|..-+++-.++
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~q--~~LElt~~~~~id~~kg~griafaip~d~  222 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDEQ--CVLELTYNYDVIDRAKGFGRIAFAIPTDD  222 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCcc--eEEEEEeccCcccccccceeEEEeccccc
Confidence            355688999999999999999999999875    334467888888764  78999988777666655554444455567


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccC--C-CCeEEEEEECCCCCEEEEEEeC
Q 024414          180 VAKTVELIKAKGGKVTREPGPVK--G-GNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       180 id~~~~~L~~~G~~i~~~p~~~~--~-G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +..+-+.++..+.++..+....+  . -..+.+.+.||||+.+.|+...
T Consensus       223 ~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde  271 (299)
T KOG2943|consen  223 LPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDE  271 (299)
T ss_pred             cccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccH
Confidence            88888888888777655444332  2 2356778889999999999654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.98  E-value=1.2e-08  Score=84.85  Aligned_cols=147  Identities=22%  Similarity=0.316  Sum_probs=85.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeecc--CCC----C-C-----CCCC
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY--GVD----K-Y-----DIGT  168 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~--~~~----~-~-----~~g~  168 (268)
                      |+||++.|+|++++.++|++.|||++......+..+..+..+.+++.    .||+....  ...    . +     ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~----YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG----YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS----EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc----eEEEEEeCCcccccccccceechhhcCCC
Confidence            79999999999999999988899999988877776767777777643    45555421  111    1 1     1467


Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCC--CeEEEEEECC----CCCEEEEEEeCCC----------CCCce
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGG--NTVIAFIEDP----DGYKFELLERGPT----------PEPLC  232 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G--~~~~~~~~DP----dG~~iEl~e~~~~----------~~~l~  232 (268)
                      |+.++|+.++|+++..+++++.|+.... +...+++  .-+.+++.|.    .+..-.+++-...          ...|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~~-r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAGS-RVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEEE-EEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCCC-cCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            8999999999999999999999976211 1111111  1234445553    2455666643321          13689


Q ss_pred             eEEEEcCCHHHHHHHHHHhc
Q 024414          233 QVMLRVGDLDRSINFYEQAF  252 (268)
Q Consensus       233 ~v~L~v~d~~~s~~FY~~vl  252 (268)
                      ++.+.+.|.+++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999999875

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.94  E-value=5.2e-09  Score=97.23  Aligned_cols=127  Identities=17%  Similarity=0.231  Sum_probs=88.8

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-----CceeEEEEeeCCCCceEEEEEeeccCC--C--------
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----EKYTNAFLGYGPEDSHFVIELTYNYGV--D--------  162 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~~--~--------  162 (268)
                      ..+|+||++.|+|++.++.||+++|||+.....+.++     .+++...+..++  ..+.++|.++...  .        
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcEEEEeccCCCCCCCcChHHHHH
Confidence            5689999999999999999999999999886554322     124555555443  3467777775321  1        


Q ss_pred             CCCCCCCeeEEEEEECCHHHHHHHHHHc----CCeEeeCC-cccC------CC------------CeEEEEEECCCCCEE
Q 024414          163 KYDIGTGFGHFGIAVDDVAKTVELIKAK----GGKVTREP-GPVK------GG------------NTVIAFIEDPDGYKF  219 (268)
Q Consensus       163 ~~~~g~g~~hi~f~V~Did~~~~~L~~~----G~~i~~~p-~~~~------~G------------~~~~~~~~DPdG~~i  219 (268)
                      ....|.|++||||.|+||.+++++|+++    |+.+...| ..+-      -+            .....+=.|.+|..+
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~L~~~~ILvD~d~~G~LL  335 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKECEELGILVDKDDQGVLL  335 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHHHHHcCEEEecCCCceEE
Confidence            1225789999999999999999999999    99988755 2110      00            011233446678888


Q ss_pred             EEEEeCC
Q 024414          220 ELLERGP  226 (268)
Q Consensus       220 El~e~~~  226 (268)
                      .++..+-
T Consensus       336 QIFTkp~  342 (398)
T PLN02875        336 QIFTKPV  342 (398)
T ss_pred             EEecccc
Confidence            8877653

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.76  E-value=6.7e-08  Score=87.39  Aligned_cols=106  Identities=19%  Similarity=0.292  Sum_probs=73.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      -+.-||+|.|+|++++++||+++||+..   +..+    ..+.+  +  ...+.+-+.+.   +  .....-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~---Fsde----~a~cm--~--dtI~vMllt~~---D--~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC---WDGD----KLFLL--G--KTSLYLQQTKA---E--KKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC---CCCC----ccccc--c--CcEEEEEecCC---C--CCCcceEEEEeccC
Confidence            3567999999999999999999988873   2211    12222  2  23333333333   1  12233345899998


Q ss_pred             C---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          179 D---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       179 D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +   +|++++++.++|++...++.+++.    .--|.|||||.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEEE
Confidence            5   899999999999977666555543    35789999999999864

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.67  E-value=1.3e-07  Score=82.31  Aligned_cols=137  Identities=19%  Similarity=0.244  Sum_probs=91.4

Q ss_pred             CCcccccccCcccccccc-------cccccccccccccC---------hhHHh-hhcCceeeEEEEEeCCHHHHHHHHHh
Q 024414           58 AAKPLRGDVNSTGVASSA-------GNAAQASTSAAHES---------ALEWV-KKDKRRMLHVVYRVGDLDRTIKFYTE  120 (268)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g---------~~~~~-~~~~~~l~HV~l~V~Dle~a~~FY~~  120 (268)
                      +.|+-+++||..++=+-.       .|- +-.+...+..         .+.|. .-....|+||+|.|.|++++.+||++
T Consensus       110 AlYl~DPEGNGIEiYaDrp~~~W~~~~~-~v~m~t~~ld~~~ll~~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~  188 (265)
T COG2514         110 ALYLEDPEGNGIEIYADRPRSTWDWQND-QVKMDTEPLDVEALLEEATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYED  188 (265)
T ss_pred             eeeecCCCCCeEEEEecCChHHhcccCC-eeeecccccCHHHHhhhccccccccCCCCcEEeEEEEEeCCHHHHHHHHHH
Confidence            689999999998875320       000 0000111111         12222 12367899999999999999999999


Q ss_pred             hcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCC-CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCc
Q 024414          121 CLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPG  199 (268)
Q Consensus       121 vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~  199 (268)
                      +|||++..+.+      ...|+..|+..+++....|........ ....|+..+.+.+++...+.....           
T Consensus       189 ~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~~~~~~l~~~~~-----------  251 (265)
T COG2514         189 VLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHTPDPEKLDATGT-----------  251 (265)
T ss_pred             hcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEcCCccccccccc-----------
Confidence            99999988722      368999999999988888875444333 355688889999887433311111           


Q ss_pred             ccCCCCeEEEEEECCCCCEEEEE
Q 024414          200 PVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       200 ~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                                ...||+|+.+.++
T Consensus       252 ----------~~~Dp~G~~i~~~  264 (265)
T COG2514         252 ----------RLTDPWGIVIRVV  264 (265)
T ss_pred             ----------ceecCCCceEEEe
Confidence                      1189999998875

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.61  E-value=6.4e-07  Score=80.60  Aligned_cols=159  Identities=18%  Similarity=0.235  Sum_probs=103.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC--CCCC--CCCCCeeEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG--VDKY--DIGTGFGHF  173 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~--~~~~--~~g~g~~hi  173 (268)
                      ..++++|.+.|.|.+++..=|-..|||....+-....    ...++-|    .+.+.+.....  ...+  .+|++..-+
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk~----v~l~rQG----dinlvvn~~~~s~a~~f~~~Hgps~~a~   91 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSKA----VTLYRQG----DINLVVNAEPDSFAAEFLDKHGPSACAM   91 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHHhCccccccccccc----eeEEEeC----CEEEEEcCCCcchhhHHHHhcCCchhee
Confidence            4689999999999955555455569999876533221    2222323    23344433211  1111  378888899


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeCCc-----ccC---CCCeEEEEEECCCCC-E-----EEEEE--eCCC---CCCceeE
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTREPG-----PVK---GGNTVIAFIEDPDGY-K-----FELLE--RGPT---PEPLCQV  234 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~p~-----~~~---~G~~~~~~~~DPdG~-~-----iEl~e--~~~~---~~~l~~v  234 (268)
                      +|.|+|...++++..+.|.+....+.     +.+   .-++...|+.|.+|. -     ++...  ..+.   ..++||+
T Consensus        92 a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDHl  171 (363)
T COG3185          92 AFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDHL  171 (363)
T ss_pred             EEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCceeechh
Confidence            99999999999999999985432222     111   112356888888841 1     22220  0111   2478999


Q ss_pred             EEEc--CCHHHHHHHHHHhcCCeEeeeecCCC
Q 024414          235 MLRV--GDLDRSINFYEQAFGMELLRKRDNPE  264 (268)
Q Consensus       235 ~L~v--~d~~~s~~FY~~vlG~~~~~~~~~p~  264 (268)
                      .++|  ++++.+..||+++|||+..+..+.|+
T Consensus       172 ~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~  203 (363)
T COG3185         172 THNVKAGQMDTWVLFYESLFGFREIQYFDIPG  203 (363)
T ss_pred             hhhcchhhHHHHHHHHHHHhCccceeeEeccC
Confidence            9997  79999999999999999988877764

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.57  E-value=4.2e-06  Score=64.33  Aligned_cols=114  Identities=25%  Similarity=0.336  Sum_probs=65.2

Q ss_pred             eEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHH
Q 024414          102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA  181 (268)
Q Consensus       102 ~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did  181 (268)
                      .+-+|.|.|-+..++||+++|||++..+..      ..+.++.......+.||-.+...........-++++-+.|++.+
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            466899999999999999999999987654      34556544333344444333222223345557889999999977


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          182 KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       182 ~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      ++-+. .++|..+.   .-+.+-.++.+-..+|+|..|.+....
T Consensus        76 EIe~L-Lar~~~~~---~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   76 EIEAL-LARGAQYD---RLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHHH-HHC-S--S---EEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHHH-Hhcccccc---eeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            66444 45565532   222233457788889999999988654

>PRK10148 hypothetical protein; Provisional

Probab=98.50  E-value=1.4e-05  Score=64.75  Aligned_cols=116  Identities=16%  Similarity=0.125  Sum_probs=76.5

Q ss_pred             EEEeC-CHHHHHHHHHhhcCCEEEEEec---C-----------------CCCceeEEEEeeCCCCceEEEEEeeccCCCC
Q 024414          105 VYRVG-DLDRTIKFYTECLGMKLLRKRD---I-----------------PEEKYTNAFLGYGPEDSHFVIELTYNYGVDK  163 (268)
Q Consensus       105 ~l~V~-Dle~a~~FY~~vLG~~~~~~~~---~-----------------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~  163 (268)
                      .|... |.++|++||+++||.++.....   .                 .++..-.+.+.+++.    .+.+...... .
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~----~lm~sD~~~~-~   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS----DIMMSDAIPS-G   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE----EEEEECCCCC-c
Confidence            35564 8999999999999998864421   0                 112334555555531    2333322111 1


Q ss_pred             CCCCCCeeEEEEEECCHHH---HHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          164 YDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       164 ~~~g~g~~hi~f~V~Did~---~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      ...+. -.++++.++|.++   ++++| +.|+++..++.+..+| .+...++||.|+.|.|......|
T Consensus        81 ~~~~~-~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg-~~~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 KAHYS-GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWA-HGFGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             CCCCC-eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchh-hccEEEECCCCCEEEEEecCCCC
Confidence            11222 3378888888776   56666 5899999999988886 47889999999999998765443

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.47  E-value=3.6e-07  Score=82.22  Aligned_cols=102  Identities=20%  Similarity=0.266  Sum_probs=75.9

Q ss_pred             CceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecCCCC--ceeEEEEeeCCCCceEEEEEeeccCCCC-------CCC
Q 024414           98 KRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVDK-------YDI  166 (268)
Q Consensus        98 ~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~-------~~~  166 (268)
                      ...|+||+..|+  .++.+..||+++|||+....++.++.  +.+.--+....  +.+.|.+........       ..+
T Consensus       165 ~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~--G~vrlplN~s~~~~sqi~efl~~y~  242 (363)
T COG3185         165 LTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPC--GKVRLPLNESADDKSQIGEFLREYR  242 (363)
T ss_pred             ceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCC--CcEEeecccCCCchhHHHHHHHHhC
Confidence            358999998887  99999999999999999988876543  33333333333  345666655332222       127


Q ss_pred             CCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCccc
Q 024414          167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPV  201 (268)
Q Consensus       167 g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~  201 (268)
                      |.|++||+|.++||-++++++++.|+++...|..+
T Consensus       243 G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~tY  277 (363)
T COG3185         243 GEGIQHIAFGTDDIYATVAALRERGVKFLPIPETY  277 (363)
T ss_pred             CCcceEEEecccHHHHHHHHHHHcCCccCCCchhH
Confidence            88999999999999999999999999998766543

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=98.20  E-value=1.1e-05  Score=61.56  Aligned_cols=88  Identities=23%  Similarity=0.273  Sum_probs=69.7

Q ss_pred             eEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCC-CEEEEEEeCCCC-------CCceeEEEEcCCH
Q 024414          171 GHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDG-YKFELLERGPTP-------EPLCQVMLRVGDL  241 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG-~~iEl~e~~~~~-------~~l~~v~L~v~d~  241 (268)
                      .||+|.|+|++++.+.+.+ .|+..... ...+....+..++..++| ..|||+++....       ..+.|+.+.|.|+
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~-~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D~   79 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWER-YRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDDL   79 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEE-EEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEEEEESHH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEE-EecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEEEEeCCH
Confidence            4999999999999999999 89775433 222233456777888888 689999988653       4589999999999


Q ss_pred             HHHHHHHHHhcCCeEeeee
Q 024414          242 DRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       242 ~~s~~FY~~vlG~~~~~~~  260 (268)
                      +++.+-+++ .|+++....
T Consensus        80 d~~~~~l~~-~G~~~~~~~   97 (109)
T PF13669_consen   80 DAAIARLEA-QGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHH-TTECEEECE
T ss_pred             HHHHHHHHH-CCCEEcccC
Confidence            999999988 799976654

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.17  E-value=2.5e-05  Score=62.50  Aligned_cols=120  Identities=19%  Similarity=0.206  Sum_probs=78.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCC--C--CCCCCCeeEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD--K--YDIGTGFGHF  173 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~--~~~g~g~~hi  173 (268)
                      ..+++||.+.++|.+++..|++ .|||+...+-....    ...++-|+    +.+.+.......  .  ..+|+++.-+
T Consensus         7 ~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk~----v~l~rQG~----I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    7 LDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSKD----VTLYRQGD----INFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCCS----EEEEEETT----EEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCcc----eEEEEeCC----EEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            4589999999999877777775 59999987643221    33334442    334443322111  1  1268899999


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      +|.|+|.+++++++.++|.+...++.  ..+.....-++.+.|-++-|+++....
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~--~~~e~~~paI~g~G~sl~yfVdr~~~~  130 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPT--GPGELNIPAIRGIGGSLHYFVDRYGDK  130 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEE--ETT-BEEEEEE-CCC-EEEEEE--SSS
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCC--CCCcEeeeeEEccCCCEEEEEecCCCC
Confidence            99999999999999999998876543  234567788999999999999987643

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.68  E-value=1.9e-05  Score=70.20  Aligned_cols=145  Identities=18%  Similarity=0.343  Sum_probs=93.7

Q ss_pred             CceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecCCCC-----ceeEEEEeeCCCCceEEEEEeeccCCCC-------
Q 024414           98 KRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEE-----KYTNAFLGYGPEDSHFVIELTYNYGVDK-------  163 (268)
Q Consensus        98 ~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~g~~~~~~~lel~~~~~~~~-------  163 (268)
                      ..+++|++..++  .++.+.+||.++|||..-+..+..+-     ..+.+.+.  +....+.+.+.++-....       
T Consensus       176 ~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vla--n~~esi~mpinEp~~G~k~ksQIqe  253 (381)
T KOG0638|consen  176 LNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLA--NYEESIKMPINEPAPGKKKKSQIQE  253 (381)
T ss_pred             eeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHh--cCCccEEEeccCCCCCCccHHHHHH
Confidence            459999999999  78899999999999987665543221     11111111  222344555554322221       


Q ss_pred             ---CCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC------C--------------CeEEEEEECCCCCEEE
Q 024414          164 ---YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG------G--------------NTVIAFIEDPDGYKFE  220 (268)
Q Consensus       164 ---~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~------G--------------~~~~~~~~DPdG~~iE  220 (268)
                         +..|.|++||++.++||=++++.++++|+.+...|..+-.      +              .-....=.|-.|+++.
T Consensus       254 yv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQ  333 (381)
T KOG0638|consen  254 YVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQ  333 (381)
T ss_pred             HHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEee
Confidence               3368899999999999999999999999999877664421      0              0012233477899999


Q ss_pred             EEEeCC--CC-------CCceeEEEEcCCHHHH
Q 024414          221 LLERGP--TP-------EPLCQVMLRVGDLDRS  244 (268)
Q Consensus       221 l~e~~~--~~-------~~l~~v~L~v~d~~~s  244 (268)
                      ++..+-  .|       .+-.|-.+-.+|+.+.
T Consensus       334 IFTKplqdrpTlFlEiIQR~n~~GFGaGNfkaL  366 (381)
T KOG0638|consen  334 IFTKPLQDRPTLFLEIIQRQNHEGFGAGNFKAL  366 (381)
T ss_pred             eeccccCCCchHHHHHHHHhcccccCcccHHHH
Confidence            997762  22       2334555555665544

>PLN02367 lactoylglutathione lyase

Probab=97.59  E-value=8.2e-05  Score=64.50  Aligned_cols=37  Identities=41%  Similarity=0.700  Sum_probs=34.6

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCCCC
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK  266 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~~~  266 (268)
                      .+.|++|+|.|++++++||+++|||++.++.++|+.+
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~  111 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMK  111 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCc
Confidence            5789999999999999999999999999999999765

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.57  E-value=0.0017  Score=51.20  Aligned_cols=89  Identities=25%  Similarity=0.372  Sum_probs=64.2

Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCccc----------CCCCeEEEEEECCCC-CEEEEEEeCCC----------
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPV----------KGGNTVIAFIEDPDG-YKFELLERGPT----------  227 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~----------~~G~~~~~~~~DPdG-~~iEl~e~~~~----------  227 (268)
                      ++.|+++.|.|++++.+...+.|.++.......          +.+..+..++..|+| ..+||++...+          
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~~~   82 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRPAP   82 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCCCC
Confidence            578999999999999999999998765432110          112345556666665 57999884311          


Q ss_pred             --CCCceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          228 --PEPLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       228 --~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                        ...+.|+.+.|.|++++.+...+ .|.++..
T Consensus        83 ~~~~g~~hia~~v~d~d~~~~~l~~-~G~~~~~  114 (142)
T cd08353          83 VNALGLRRVMFAVDDIDARVARLRK-HGAELVG  114 (142)
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHH-CCCceeC
Confidence              13477999999999999999977 6877654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=97.41  E-value=0.00022  Score=57.32  Aligned_cols=40  Identities=55%  Similarity=0.940  Sum_probs=34.1

Q ss_pred             CCCCCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCCC
Q 024414          226 PTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY  265 (268)
Q Consensus       226 ~~~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~~  265 (268)
                      ....+++|+.|.|.|++++.+||+++|||++..+.+.|+.
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~   52 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEM   52 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCC
Confidence            3456799999999999999999999999998776666654

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=97.39  E-value=0.0002  Score=60.24  Aligned_cols=46  Identities=33%  Similarity=0.529  Sum_probs=37.5

Q ss_pred             EEEEeCCCC---CCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCCC
Q 024414          220 ELLERGPTP---EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY  265 (268)
Q Consensus       220 El~e~~~~~---~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~~  265 (268)
                      .++++.+.+   ..+.|+.|+|.|++++++||+++|||++..+.++|+.
T Consensus        14 ~~~~~~~~~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~   62 (185)
T PLN03042         14 GLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEM   62 (185)
T ss_pred             ccccCCCCCCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCC
Confidence            345555443   4689999999999999999999999999888777764

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.29  E-value=0.014  Score=45.23  Aligned_cols=96  Identities=19%  Similarity=0.348  Sum_probs=55.2

Q ss_pred             CCHHHHHHHHHhhcCCEE-EEEecCC------CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC--
Q 024414          109 GDLDRTIKFYTECLGMKL-LRKRDIP------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD--  179 (268)
Q Consensus       109 ~Dle~a~~FY~~vLG~~~-~~~~~~~------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D--  179 (268)
                      .+.++|.+||+++||-.. ......+      ....-.+.+..++    ..+......  +....++++ .+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g----~~lm~~D~~--~~~~~~~~~-sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGG----QKLMASDGG--PDFPFGNNI-SLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETT----EEEEEEEES--TS----TTE-EEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECC----eEEEEECCC--CCCCCCCcE-EEEEEcCCHH
Confidence            699999999999999533 3222221      1223344454442    223333322  333344554 78999987  


Q ss_pred             -HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          180 -VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       180 -id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                       +++++++|.+-|-          +.. ....+.|..|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence             5667778877664          223 7789999999999885

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=97.28  E-value=0.0055  Score=50.09  Aligned_cols=88  Identities=20%  Similarity=0.213  Sum_probs=63.9

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcc-----------------cCCCCeEEEEEECCCCCEEEEEEeCCCC-
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGP-----------------VKGGNTVIAFIEDPDGYKFELLERGPTP-  228 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~-----------------~~~G~~~~~~~~DPdG~~iEl~e~~~~~-  228 (268)
                      .++.|+++.|.|+++..+..++ .|.++..++..                 .++.....+++..++|..||+++..... 
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            4688999999999999999977 79876532110                 0111234566666778889999876321 


Q ss_pred             ---------CCceeEEEEcCCHHHHHHHHHHhcCCeE
Q 024414          229 ---------EPLCQVMLRVGDLDRSINFYEQAFGMEL  256 (268)
Q Consensus       229 ---------~~l~~v~L~v~d~~~s~~FY~~vlG~~~  256 (268)
                               ..+.|+.+.|.|+++..+..++ .|.++
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~-~G~~~  118 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVA-AGGKK  118 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHH-cCCcc
Confidence                     3477999999999999999988 46543

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.28  E-value=0.0071  Score=45.80  Aligned_cols=88  Identities=23%  Similarity=0.257  Sum_probs=62.4

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC--------CCCceeEEEEcC
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVMLRVG  239 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~--------~~~l~~v~L~v~  239 (268)
                      ++.|+++.|+|++++.+..++ .|..+...... +.+....+.+..+++..++++.....        ...+.|+.+.|.
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~v~   81 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYR-PERGSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAFSVE   81 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeec-CCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEEEeC
Confidence            678999999999999999985 89887543211 12122334455567778888764421        235679999999


Q ss_pred             CHHHHHHHHHHhcCCeEee
Q 024414          240 DLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       240 d~~~s~~FY~~vlG~~~~~  258 (268)
                      |++++.+..++ .|+++..
T Consensus        82 d~~~~~~~l~~-~G~~~~~   99 (125)
T cd08352          82 DIEAAVKHLKA-KGVEVEP   99 (125)
T ss_pred             CHHHHHHHHHH-cCCcccc
Confidence            99999888876 6877654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=97.26  E-value=0.006  Score=46.59  Aligned_cols=88  Identities=24%  Similarity=0.346  Sum_probs=63.6

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----------CCCceeEEEE
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------PEPLCQVMLR  237 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----------~~~l~~v~L~  237 (268)
                      +.|++|.|+|++++.+...+ .|..........+++.....++.. +|..++|+++...           ...+.|+.+.
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~   79 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFE   79 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEE
Confidence            35999999999999999987 888765432222122334455554 6888999976532           2346899999


Q ss_pred             cCCHHHHHHHHHHhcCCeEeee
Q 024414          238 VGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      |.|++++.+...+ .|.++...
T Consensus        80 v~d~~~~~~~l~~-~G~~~~~~  100 (128)
T cd07249          80 VDDIDAALARLKA-QGVRLLQE  100 (128)
T ss_pred             eCCHHHHHHHHHH-CCCeeecc
Confidence            9999999999977 68876554

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=97.11  E-value=0.00049  Score=52.95  Aligned_cols=31  Identities=19%  Similarity=0.300  Sum_probs=28.1

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .+++|+.|.|.|++++.+||+++|||++..+
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~   31 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDR   31 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccC
Confidence            3689999999999999999999999997655

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=97.08  E-value=0.011  Score=44.85  Aligned_cols=88  Identities=17%  Similarity=0.257  Sum_probs=56.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECC---CCCEEEEEEeCCC-------CCCceeEEEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDP---DGYKFELLERGPT-------PEPLCQVMLR  237 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DP---dG~~iEl~e~~~~-------~~~l~~v~L~  237 (268)
                      |+.|+++.|+|++++.+...+ .|..................++.+.   .|..++|++....       ...+.|+.+.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            467999999999999999986 6987654422221112334555554   6778999876432       2347899999


Q ss_pred             cCCHHHHHHHHHHh--cCCeE
Q 024414          238 VGDLDRSINFYEQA--FGMEL  256 (268)
Q Consensus       238 v~d~~~s~~FY~~v--lG~~~  256 (268)
                      +.|.+...+.|.++  .|.++
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~  101 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPV  101 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcc
Confidence            98664444444443  45554

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK11478 putative lyase; Provisional

Probab=97.02  E-value=0.00074  Score=52.20  Aligned_cols=30  Identities=20%  Similarity=0.345  Sum_probs=27.6

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      .+++|+.|.|.|++++.+||+++|||++..
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~   34 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQS   34 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEecc
Confidence            568999999999999999999999999754

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.01  E-value=0.00057  Score=50.73  Aligned_cols=33  Identities=36%  Similarity=0.443  Sum_probs=28.6

Q ss_pred             ceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCC
Q 024414          231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       231 l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p  263 (268)
                      ++|+.|.|.|++++.+||+++|||++..+.+.+
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~   33 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL   33 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC
Confidence            589999999999999999999999977654443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=96.97  E-value=0.00083  Score=51.58  Aligned_cols=32  Identities=28%  Similarity=0.474  Sum_probs=28.8

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      .++.|+.|.|.|++++.+||+++|||++....
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~   34 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRD   34 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeec
Confidence            46899999999999999999999999986654

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=96.94  E-value=0.001  Score=51.05  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=29.4

Q ss_pred             CCCceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          228 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       228 ~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      ...+.|+.|.|.|++++.+||+++|||++..+.
T Consensus         4 i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~   36 (121)
T cd09013           4 IAHLAHVELLTPKPEESLWFFTDVLGLEETGRE   36 (121)
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeec
Confidence            357899999999999999999999999987653

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=96.86  E-value=0.0013  Score=51.79  Aligned_cols=34  Identities=29%  Similarity=0.438  Sum_probs=30.1

Q ss_pred             CCCCceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          227 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       227 ~~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      .+..+.|..|.+.|++++.+||++||||+..+..
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~   39 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYF   39 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccc
Confidence            3567899999999999999999999999977664

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=96.84  E-value=0.016  Score=48.77  Aligned_cols=89  Identities=16%  Similarity=0.139  Sum_probs=65.9

Q ss_pred             CeeEEEEEEC--CHHHHHHHHHH-cCCeEeeCCcc-cCCCCeEEEEEECCCC-CEEEEEEeCCC--------------CC
Q 024414          169 GFGHFGIAVD--DVAKTVELIKA-KGGKVTREPGP-VKGGNTVIAFIEDPDG-YKFELLERGPT--------------PE  229 (268)
Q Consensus       169 g~~hi~f~V~--Did~~~~~L~~-~G~~i~~~p~~-~~~G~~~~~~~~DPdG-~~iEl~e~~~~--------------~~  229 (268)
                      ++.|+++.|+  |++++++...+ .|......... .+.++.+..++..|+| ..++|.++.+.              ..
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G~   82 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGGA   82 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCCC
Confidence            5779999999  99999999866 88876543211 1123456677888765 56888886651              24


Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      .+.|+.+.|.|++++.+-.++ -|.+...
T Consensus        83 Gv~HIAf~vdDI~~~~~~L~~-~Gv~~l~  110 (191)
T cd07250          83 GVQHIALATDDIFATVAALRA-RGVEFLP  110 (191)
T ss_pred             ceeEEEEECCCHHHHHHHHHH-cCCeecc
Confidence            678999999999999999977 6877653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=96.83  E-value=0.0011  Score=51.54  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=28.2

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .++.|+.|.|.|++++.+||+++|||++..+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~   35 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAER   35 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccC
Confidence            4689999999999999999999999997654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=96.82  E-value=0.031  Score=42.19  Aligned_cols=88  Identities=23%  Similarity=0.304  Sum_probs=62.4

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC---CCEEEEEEeCCC------CCCceeEEEEcC
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD---GYKFELLERGPT------PEPLCQVMLRVG  239 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd---G~~iEl~e~~~~------~~~l~~v~L~v~  239 (268)
                      +.|+++.|+|++++.+...+ .|.+....... +.+....+++..++   +..+++.+..+.      ...+.|+.+.+.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~   79 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDF-PEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVD   79 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEec-CCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeC
Confidence            36999999999999999987 49887643222 22223445555544   577888765322      246789999999


Q ss_pred             CHHHHHHHHHHhcCCeEeee
Q 024414          240 DLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       240 d~~~s~~FY~~vlG~~~~~~  259 (268)
                      |++++.+-..+ .|.++...
T Consensus        80 did~~~~~l~~-~G~~~~~~   98 (121)
T cd07233          80 DVYAACERLEE-MGVEVTKP   98 (121)
T ss_pred             CHHHHHHHHHH-CCCEEeeC
Confidence            99999888865 88887654

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=96.79  E-value=0.0017  Score=49.45  Aligned_cols=31  Identities=29%  Similarity=0.516  Sum_probs=27.8

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .+|+|+.|.|.|++++.+||+++|||+....
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~   32 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAE   32 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEe
Confidence            3689999999999999999999999997544

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=96.75  E-value=0.002  Score=48.65  Aligned_cols=31  Identities=29%  Similarity=0.654  Sum_probs=28.5

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      +++|+.|.|.|++++.+||+++|||++....
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~   32 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRD   32 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeec
Confidence            5899999999999999999999999987654

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=96.68  E-value=0.027  Score=45.77  Aligned_cols=82  Identities=21%  Similarity=0.300  Sum_probs=54.9

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEEC--CCCCEEEEEEeCCC------CCCceeEEEEcC
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIED--PDGYKFELLERGPT------PEPLCQVMLRVG  239 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~D--PdG~~iEl~e~~~~------~~~l~~v~L~v~  239 (268)
                      |+.||++.|.|+++..+...+ .|.++.....    +  ...++..  .++..+++++....      ...+.|+.+.|.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~----~--~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG----D--RVRLEEGGGGPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC----C--EEEEEecCCCCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            578999999999999999976 5887753311    1  2223332  35889999886421      246789999999


Q ss_pred             CHHHHHHHHHHh--cCCeE
Q 024414          240 DLDRSINFYEQA--FGMEL  256 (268)
Q Consensus       240 d~~~s~~FY~~v--lG~~~  256 (268)
                      |.+...++|.++  .|+.+
T Consensus        75 d~~dvd~~~~~L~~~Gv~~   93 (157)
T cd08347          75 DDEELEAWKERLEALGLPV   93 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCc
Confidence            854444444444  46654

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=96.65  E-value=0.034  Score=43.54  Aligned_cols=84  Identities=20%  Similarity=0.232  Sum_probs=60.4

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECC---CCCEEEEEEeCCCCCCceeEEEEcCCHHH
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDP---DGYKFELLERGPTPEPLCQVMLRVGDLDR  243 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DP---dG~~iEl~e~~~~~~~l~~v~L~v~d~~~  243 (268)
                      ..+.|+++.|+|+++..+..++ .|.++.....    .  ...++...   ..+.+.+.........+.|+.+.|.|+++
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~----~--~~~~~~~~~~~~~~~i~l~~~~~~~~g~~hiaf~v~d~~~   75 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK----G--RGAFLRAAGGGDHHNLFLIKTPAPMAGFHHAAFEVGDIDE   75 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec----C--cEEEEECCCCCCCcEEEEecCCCCCCcceEEEEEeCCHHH
Confidence            3578999999999999999876 6887653311    1  12455543   23567666554444789999999999999


Q ss_pred             HHHHHHHh--cCCeEe
Q 024414          244 SINFYEQA--FGMELL  257 (268)
Q Consensus       244 s~~FY~~v--lG~~~~  257 (268)
                      ..+++..+  .|.++.
T Consensus        76 ~~~~~~~l~~~G~~~~   91 (134)
T cd08360          76 VMLGGNHMLRAGYQTG   91 (134)
T ss_pred             HHHHHHHHHHcCCccc
Confidence            99988877  666654

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.60  E-value=0.072  Score=40.26  Aligned_cols=88  Identities=17%  Similarity=0.227  Sum_probs=55.6

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC--------CCCCceeEEEEcCC
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------TPEPLCQVMLRVGD  240 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~--------~~~~l~~v~L~v~d  240 (268)
                      +.|+++.|+|+++..+...+ .|.+....-.....+ ....++.-.+|..+++++...        ....+.|+.+.|.|
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~v~~   80 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKG-FESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHLAFSVGS   80 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCC-ceEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEEEEECCC
Confidence            46999999999999998887 577653221111112 223344444678899986432        12357899999977


Q ss_pred             HHHHHHHHHHh--cCCeEee
Q 024414          241 LDRSINFYEQA--FGMELLR  258 (268)
Q Consensus       241 ~~~s~~FY~~v--lG~~~~~  258 (268)
                      .+...++|+++  .|.++..
T Consensus        81 ~~~v~~~~~~l~~~g~~~~~  100 (125)
T cd07241          81 KEAVDELTERLRADGYLIIG  100 (125)
T ss_pred             HHHHHHHHHHHHHCCCEEEe
Confidence            65555555554  6766554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=96.59  E-value=0.0025  Score=48.69  Aligned_cols=31  Identities=35%  Similarity=0.513  Sum_probs=27.9

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .++.|+.|.|.|++++.+||+++|||++...
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~   33 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEE   33 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEecc
Confidence            3689999999999999999999999997644

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=96.56  E-value=0.041  Score=39.88  Aligned_cols=83  Identities=24%  Similarity=0.359  Sum_probs=63.0

Q ss_pred             EEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----CCCceeEEEEcCCHHHHH
Q 024414          172 HFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----PEPLCQVMLRVGDLDRSI  245 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----~~~l~~v~L~v~d~~~s~  245 (268)
                      |+.+.|.|+++..+.+.+ .|.+.......   +.....++.++ +..++|.+..+.     .....|+.+.+.|+++..
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~---~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   76 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN---GGAEFAVLGLG-GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDAAY   76 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc---CCEEEEEEecC-CceEEEecCCCCCCcccCCCeeEEEEECCCHHHHH
Confidence            789999999999999998 99887654321   22355666665 789999987764     366889999999998888


Q ss_pred             HHHHHhcCCeEeee
Q 024414          246 NFYEQAFGMELLRK  259 (268)
Q Consensus       246 ~FY~~vlG~~~~~~  259 (268)
                      +-..+ .|..+...
T Consensus        77 ~~l~~-~g~~~~~~   89 (112)
T cd06587          77 ERLKA-AGVEVLGE   89 (112)
T ss_pred             HHHHH-cCCcccCC
Confidence            88766 67665443

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=96.55  E-value=0.0027  Score=48.94  Aligned_cols=29  Identities=21%  Similarity=0.464  Sum_probs=26.7

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      .+.|+.|.|.|++++.+||+++|||+...
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~   32 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAK   32 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeee
Confidence            57899999999999999999999998755

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=96.48  E-value=0.0034  Score=47.67  Aligned_cols=30  Identities=27%  Similarity=0.551  Sum_probs=26.8

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .++.|+.|.|.|++++.+||++ |||++..+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~   31 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAAR   31 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEe
Confidence            3689999999999999999999 99997654

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=96.48  E-value=0.055  Score=42.46  Aligned_cols=84  Identities=15%  Similarity=0.212  Sum_probs=58.7

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----------CCCceeEEEE
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------PEPLCQVMLR  237 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----------~~~l~~v~L~  237 (268)
                      +.|++|.|+|++++.+..++ .|+++......   ......++.+ .+..+++.++...           ...+.|+.+.
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~---~~~~~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~   76 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGS---EDKASYLLRQ-GDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFR   76 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCC---CceEEEEEEc-CCEEEEEecCCCCCCchHHHHHhcCCceEEEEEE
Confidence            36999999999999999999 99887643221   1123344443 4556777654421           2357799999


Q ss_pred             cCCHHHHHHHHHHhcCCeEee
Q 024414          238 VGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      |.|++++.+-..+ .|.++..
T Consensus        77 V~Dvda~~~~l~~-~G~~v~~   96 (136)
T cd08342          77 VDDAAAAYERAVA-RGAKPVQ   96 (136)
T ss_pred             eCCHHHHHHHHHH-cCCeEcc
Confidence            9999999988866 7777653

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.47  E-value=0.06  Score=40.10  Aligned_cols=86  Identities=17%  Similarity=0.196  Sum_probs=61.4

Q ss_pred             EEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCC--CEEEEEEeCCC-------CCCceeEEEEcCCH
Q 024414          172 HFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDG--YKFELLERGPT-------PEPLCQVMLRVGDL  241 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG--~~iEl~e~~~~-------~~~l~~v~L~v~d~  241 (268)
                      |+++.|.|++++.+...+ .|.++....... . +...+.+.++++  ..+++.+....       .....|+.+.|.|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMG-G-GFRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccC-C-CcEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            789999999999999987 898876442211 2 234556666654  45666544322       24578999999999


Q ss_pred             HHHHHHHHHhcCCeEeeee
Q 024414          242 DRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       242 ~~s~~FY~~vlG~~~~~~~  260 (268)
                      +++.+...+ .|.++....
T Consensus        79 ~~~~~~l~~-~g~~~~~~~   96 (119)
T cd07263          79 DATYEELKA-RGVEFSEEP   96 (119)
T ss_pred             HHHHHHHHh-CCCEEeecc
Confidence            999999976 888776544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=96.42  E-value=0.055  Score=43.66  Aligned_cols=90  Identities=21%  Similarity=0.353  Sum_probs=60.5

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcc-cC-CCCeEEEEEE-CCCCCEEEEEEeCCCCCCceeEEEEcCCHHH
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGP-VK-GGNTVIAFIE-DPDGYKFELLERGPTPEPLCQVMLRVGDLDR  243 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~-~~-~G~~~~~~~~-DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~~  243 (268)
                      .++.|+++.|+|++++.+...+ .|..+...... .+ ++....+++. +..++.+.+.+.. ....+.|+.+.|.|.+.
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~g~~Hiaf~V~d~~~   86 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGP-GPKRIHHLMLEVTSLDD   86 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCC-CCceeEEEEEEcCCHHH
Confidence            4788999999999999999877 88876432111 11 1122344444 4556667765543 34679999999999887


Q ss_pred             HHHHHHHh--cCCeEee
Q 024414          244 SINFYEQA--FGMELLR  258 (268)
Q Consensus       244 s~~FY~~v--lG~~~~~  258 (268)
                      ..+++.++  .|.++..
T Consensus        87 l~~~~~~L~~~G~~v~~  103 (154)
T cd07237          87 VGRAYDRVRARGIPIAM  103 (154)
T ss_pred             HHHHHHHHHHcCCceec
Confidence            66666654  7777643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=96.26  E-value=0.0054  Score=46.39  Aligned_cols=30  Identities=33%  Similarity=0.615  Sum_probs=26.4

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      +++|+.|.|.|++++.+||+ +|||++..+.
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~   31 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG   31 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec
Confidence            68999999999999999997 6999986543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF15067 FAM124: FAM124 family

Probab=96.21  E-value=0.046  Score=47.10  Aligned_cols=119  Identities=18%  Similarity=0.246  Sum_probs=73.2

Q ss_pred             cccChhHHhhhc---CceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeec-c
Q 024414           86 AHESALEWVKKD---KRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN-Y  159 (268)
Q Consensus        86 ~~~g~~~~~~~~---~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~-~  159 (268)
                      ..+++|-|--..   ..-+-.+.|.|+  |.+.+++||+-+|+-+...+..    + -.+|.-+...+..+++.+..- .
T Consensus       111 l~~~~PlWavr~VH~G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~----~-FC~F~lys~~~~~iQlsLK~lp~  185 (236)
T PF15067_consen  111 LDPGMPLWAVRQVHYGKEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE----D-FCFFTLYSQPGLDIQLSLKQLPP  185 (236)
T ss_pred             cCCCCceeEEeeeeccccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC----C-cEEEEEecCCCeEEEEEeccCCC
Confidence            456778885432   335667889999  9999999999999988754433    2 244444444444455544332 1


Q ss_pred             CCCCCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEE
Q 024414          160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  221 (268)
Q Consensus       160 ~~~~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl  221 (268)
                      +..+  ....-.-+.|.|.|+.+++-.|=.--.+|         +.++ --..|||||.|-|
T Consensus       186 ~~~p--~p~esavLqF~V~~igqLvpLLPnpc~PI---------S~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  186 GMSP--EPTESAVLQFRVEDIGQLVPLLPNPCSPI---------SETR-WQTEDYDGNKILL  235 (236)
T ss_pred             CCCc--ccccceEEEEEecchhhhcccCCCCcccc---------cCCc-ceeeCCCCCEecc
Confidence            2211  12223358999999998876663332222         1222 2478999999843

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=96.19  E-value=0.12  Score=40.08  Aligned_cols=84  Identities=21%  Similarity=0.336  Sum_probs=59.0

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECC--CCCEEEEEEeCCC-----CCCceeEEEEcCCH
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDP--DGYKFELLERGPT-----PEPLCQVMLRVGDL  241 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DP--dG~~iEl~e~~~~-----~~~l~~v~L~v~d~  241 (268)
                      +.|+.+.|+|++++.+...+ .|.++.....   .  ....++..+  .+..+.+++....     ...+.|+.+.|.|.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~---~--~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~~   76 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGP---L--GGLVFLSRDPDEHHQIALITGRPAAPPPGPAGLNHIAFEVDSL   76 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeecc---C--CcEEEEEecCCCceEEEEEecCCCCCCCCCCCceEEEEEeCCH
Confidence            57999999999999999987 8987653321   1  123455543  3567888766532     24678999999999


Q ss_pred             HHHHHHHHHh--cCCeEee
Q 024414          242 DRSINFYEQA--FGMELLR  258 (268)
Q Consensus       242 ~~s~~FY~~v--lG~~~~~  258 (268)
                      +...++|.++  .|+++..
T Consensus        77 ~~v~~~~~~l~~~G~~~~~   95 (134)
T cd08348          77 DDLRDLYERLRAAGITPVW   95 (134)
T ss_pred             HHHHHHHHHHHHCCCCccc
Confidence            9887777765  4666544

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PRK06724 hypothetical protein; Provisional

Probab=96.14  E-value=0.0076  Score=47.37  Aligned_cols=29  Identities=31%  Similarity=0.611  Sum_probs=25.5

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhc---CCeEe
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAF---GMELL  257 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vl---G~~~~  257 (268)
                      ..++|+.|.|.|++++.+||+++|   ||+..
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~   37 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKL   37 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEe
Confidence            468999999999999999999966   77764

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.12  E-value=0.082  Score=40.46  Aligned_cols=84  Identities=18%  Similarity=0.235  Sum_probs=56.2

Q ss_pred             CeeEEEEEECCHHHHHHHHHHc----CCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC--------CCceeEEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKAK----GGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP--------EPLCQVML  236 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~----G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~--------~~l~~v~L  236 (268)
                      ++.|+++.|+|++++.+...+.    |.+.....   +.+   ..|+...++..+++++.....        ..+.|+.+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~---~~~---~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEW---EDG---RSWRAGDGGTYLVLQQADGESAGRHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEee---ccC---ceEEecCCceEEEEEecccCCCcccccCCcCeeEEEE
Confidence            4679999999999999999886    88865432   111   133333466788888766422        34789999


Q ss_pred             EcCC---HHHHHHHHHHhcCCeEeee
Q 024414          237 RVGD---LDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       237 ~v~d---~~~s~~FY~~vlG~~~~~~  259 (268)
                      .|.|   ++++.+-.++ .|..+...
T Consensus        75 ~v~~~~d~~~~~~~l~~-~g~~~~~~   99 (128)
T cd07242          75 RAPSREAVDELYARLAK-RGAEILYA   99 (128)
T ss_pred             EcCCHHHHHHHHHHHHH-cCCeEecC
Confidence            9976   4555555544 57776553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=96.10  E-value=0.093  Score=42.94  Aligned_cols=87  Identities=9%  Similarity=0.127  Sum_probs=54.3

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEE-CCCCCEEEEEEeC-CCCCCceeEEEEcCCHHHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIE-DPDGYKFELLERG-PTPEPLCQVMLRVGDLDRSI  245 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~-DPdG~~iEl~e~~-~~~~~l~~v~L~v~d~~~s~  245 (268)
                      ++.|++|.|+|++++.+...+ .|.+....... ..+.....++. ++..+.+.+.... .....+.|+.+.|.|.+...
T Consensus         6 ~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~hiaf~v~~~~~l~   84 (166)
T cd09014           6 RLDHVNLLASDVDANRDFMEEVLGFRLREQIRL-DNGKEAGAWMSVSNKVHDVAYTRDPAGARGRLHHLAYALDTREDVL   84 (166)
T ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCEEEEEEec-CCCceEEEEEeCCCCceeEEEecCCCCCCCCceEEEEECCCHHHHH
Confidence            678999999999999999975 88876433111 11222234444 3334445444322 22456899999999888766


Q ss_pred             HHHHHh--cCCeE
Q 024414          246 NFYEQA--FGMEL  256 (268)
Q Consensus       246 ~FY~~v--lG~~~  256 (268)
                      ++|+++  .|.++
T Consensus        85 ~~~~~l~~~Gv~i   97 (166)
T cd09014          85 RAADIFLENGIFI   97 (166)
T ss_pred             HHHHHHHHcCCcc
Confidence            666554  44443

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=96.03  E-value=0.029  Score=45.22  Aligned_cols=87  Identities=22%  Similarity=0.187  Sum_probs=54.8

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCC------EEEEEEeCCCCCCceeEEEEcCCHH
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGY------KFELLERGPTPEPLCQVMLRVGDLD  242 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~------~iEl~e~~~~~~~l~~v~L~v~d~~  242 (268)
                      +.||++.|+|+++..+...+ .|.++.........+.....++.-.+|.      .+.+..  .....+.|+.+.|.|++
T Consensus         2 i~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~g~~Hiaf~v~die   79 (153)
T cd07257           2 LGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ--GPESGVHHAAFEVHDFD   79 (153)
T ss_pred             ccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc--CCCCceeEEEEEcCCHH
Confidence            56999999999999998855 7887654321110122344555543332      122222  22467999999999999


Q ss_pred             HHHHHHHH--hcCCeEee
Q 024414          243 RSINFYEQ--AFGMELLR  258 (268)
Q Consensus       243 ~s~~FY~~--vlG~~~~~  258 (268)
                      ++.+.+..  ..|+++.+
T Consensus        80 ~~~~~~~~L~~~Gv~v~~   97 (153)
T cd07257          80 AQGLGHDYLREKGYEHVW   97 (153)
T ss_pred             HHHHHHHHHHHCCCcEee
Confidence            99855444  26676553

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.01  E-value=0.0086  Score=45.76  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=25.7

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      ++.++.|.|.|++++.+||+++|||++..
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~   30 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVM   30 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEee
Confidence            36789999999999999999999998753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=95.88  E-value=0.23  Score=37.10  Aligned_cols=84  Identities=19%  Similarity=0.147  Sum_probs=59.6

Q ss_pred             eEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---CCCceeEEEEcCCHHHHHH
Q 024414          171 GHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---PEPLCQVMLRVGDLDRSIN  246 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---~~~l~~v~L~v~d~~~s~~  246 (268)
                      .|++|.|.|+++..+...+ .|.++.....  ..  ...+.+...++..+.++...+.   .....|+.+.+.|+++..+
T Consensus         2 ~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~di~~~~~   77 (114)
T cd07247           2 VWFELPTTDPERAKAFYGAVFGWTFEDMGD--GG--GDYAVFSTGGGAVGGLMKAPEPAAGSPPGWLVYFAVDDVDAAAA   77 (114)
T ss_pred             EEEEeeCCCHHHHHHHHHhccCceeeeccC--CC--CceEEEEeCCccEEEEecCCCCCCCCCCeEEEEEEeCCHHHHHH
Confidence            5999999999999999987 5987754432  11  2334455444456667766543   3566789999999999999


Q ss_pred             HHHHhcCCeEeee
Q 024414          247 FYEQAFGMELLRK  259 (268)
Q Consensus       247 FY~~vlG~~~~~~  259 (268)
                      -..+ .|.++...
T Consensus        78 ~l~~-~g~~~~~~   89 (114)
T cd07247          78 RVEA-AGGKVLVP   89 (114)
T ss_pred             HHHH-CCCEEEeC
Confidence            8866 68876544

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.68  E-value=0.21  Score=37.90  Aligned_cols=81  Identities=14%  Similarity=0.157  Sum_probs=55.0

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC-CCEEEEEEeCCC------CCCceeEEEEcCC
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD-GYKFELLERGPT------PEPLCQVMLRVGD  240 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd-G~~iEl~e~~~~------~~~l~~v~L~v~d  240 (268)
                      .+.|+.+.|+|++++.+...+ .|.++....     +  ..+++...+ +..|.+.+....      ...+.|+.+.+.+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~-----~--~~~~l~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~~   74 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERT-----D--STAVLGTGGKRPLLVLEEDPDAPPAPPGATGLYHFAILLPS   74 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcC-----C--CEEEEecCCCeEEEEEEeCCCCCcccCCCCcEEEEEEECCC
Confidence            367999999999999999987 798876441     1  124455444 466777765432      2457899999987


Q ss_pred             HHHHHHHHHHhc--CCeE
Q 024414          241 LDRSINFYEQAF--GMEL  256 (268)
Q Consensus       241 ~~~s~~FY~~vl--G~~~  256 (268)
                      .+...+++.++.  |.+.
T Consensus        75 ~~~v~~~~~~l~~~g~~~   92 (125)
T cd07255          75 RADLAAALRRLIELGIPL   92 (125)
T ss_pred             HHHHHHHHHHHHHcCCce
Confidence            666666665554  5554

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.63  E-value=0.17  Score=38.46  Aligned_cols=76  Identities=18%  Similarity=0.132  Sum_probs=52.1

Q ss_pred             eeEEEEEECCHHHHHHHHHH----cCCeEeeCCcccCCCCeEEEEEECC-CCCEEEEEEeCC----CCCCceeEEEEcCC
Q 024414          170 FGHFGIAVDDVAKTVELIKA----KGGKVTREPGPVKGGNTVIAFIEDP-DGYKFELLERGP----TPEPLCQVMLRVGD  240 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~----~G~~i~~~p~~~~~G~~~~~~~~DP-dG~~iEl~e~~~----~~~~l~~v~L~v~d  240 (268)
                      +.|+.+.|.|++++.+..++    .|.......    .+ .. +.+..+ .+..+.+....+    ......|+.+.|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~----~~-~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~hi~f~v~~   74 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED----GP-GA-VGYGKGGGGPDFWVTKPFDGEPATAGNGTHVAFAAPS   74 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec----CC-ce-eEeccCCCCceEEEeccccCCCCCCCCceEEEEECCC
Confidence            35999999999999998887    487765332    11 12 344544 366788876543    23446799999998


Q ss_pred             HHHHHHHHHHh
Q 024414          241 LDRSINFYEQA  251 (268)
Q Consensus       241 ~~~s~~FY~~v  251 (268)
                      .+...+++.++
T Consensus        75 ~~~v~~~~~~~   85 (123)
T cd07262          75 REAVDAFHAAA   85 (123)
T ss_pred             HHHHHHHHHHH
Confidence            77777777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=95.62  E-value=0.28  Score=38.19  Aligned_cols=87  Identities=16%  Similarity=0.291  Sum_probs=54.2

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCC-CCeEEEEEECCCCCEEEEEEeCCC-CCCceeEEEEcC--CHH
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKG-GNTVIAFIEDPDGYKFELLERGPT-PEPLCQVMLRVG--DLD  242 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~-G~~~~~~~~DPdG~~iEl~e~~~~-~~~l~~v~L~v~--d~~  242 (268)
                      .++.|+++.|+|+++..+...+ .|.+.......... .....++.  -.+..+++.+..+. ...+.|+.+.|.  |++
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~Hiaf~v~~~~ld   80 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL--IGGLWIAIMEGDSLQERTYNHIAFKISDSDVD   80 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE--cCCeEEEEecCCCCCCCCceEEEEEcCHHHHH
Confidence            3688999999999999998877 78765433221110 01111222  23577888765543 235899999997  455


Q ss_pred             HHHHHHHHhcCCeEe
Q 024414          243 RSINFYEQAFGMELL  257 (268)
Q Consensus       243 ~s~~FY~~vlG~~~~  257 (268)
                      +..+-.++ .|.++.
T Consensus        81 ~~~~~l~~-~gv~~~   94 (131)
T cd08364          81 EYTERIKA-LGVEMK   94 (131)
T ss_pred             HHHHHHHH-CCCEEe
Confidence            55555544 677654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=95.58  E-value=0.34  Score=36.36  Aligned_cols=89  Identities=26%  Similarity=0.427  Sum_probs=55.5

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCc-ccCCCCeEEEEEECCCCCEEEEEEeCCCC-C---------CceeEEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPG-PVKGGNTVIAFIEDPDGYKFELLERGPTP-E---------PLCQVML  236 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~-~~~~G~~~~~~~~DPdG~~iEl~e~~~~~-~---------~l~~v~L  236 (268)
                      ++.|+++.|.|++++.+...+ .|.+...... ....+.....++...+. .+++......+ .         .+.|+.+
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~   79 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG-HIELFLNPSPPPRASGHSFPEHGGHHIAF   79 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS-CEEEEEEESSSSSSEEEHHHSHTSEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc-ceeeeeeccccccccccccccccceeEEE
Confidence            578999999999999998888 7888776544 22223334555555554 46665544322 1         2346777


Q ss_pred             EcCCHHHHHHHHHHh--cCCeEee
Q 024414          237 RVGDLDRSINFYEQA--FGMELLR  258 (268)
Q Consensus       237 ~v~d~~~s~~FY~~v--lG~~~~~  258 (268)
                      .+.+.+...++|+++  .|.++..
T Consensus        80 ~~~~~~dl~~~~~~l~~~g~~~~~  103 (128)
T PF00903_consen   80 LAFDVDDLDAAYERLKAQGVEIVE  103 (128)
T ss_dssp             EESSHHHHHHHHHHHHHTTGEEEE
T ss_pred             EeccHHHHHHHHHHHhhcCccEEe
Confidence            777666666666554  3555433

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=95.57  E-value=0.35  Score=38.45  Aligned_cols=87  Identities=10%  Similarity=0.090  Sum_probs=55.6

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCe-EEEEEE-CCCCCEEEEEEeCCCCCCceeEEEEcCCHHHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNT-VIAFIE-DPDGYKFELLERGPTPEPLCQVMLRVGDLDRSI  245 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~-~~~~~~-DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~~s~  245 (268)
                      .+.|+++.|.|+++..+..++ .|.++...... +.+.. ...|+. +..-+.+.+.+.  ....+.|+.+.|.|+++..
T Consensus         6 ~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~-~~~~~~~~~~l~~~~~~h~~~~~~~--~~~~~~Hiaf~v~d~~~l~   82 (143)
T cd07243           6 RLDHCLLTGEDIAETTRFFTDVLDFYLAERVVD-PDGGTRVGSFLSCSNKPHDIAFVGG--PDGKLHHFSFFLESWEDVL   82 (143)
T ss_pred             eeCEEEEecCCHHHHHHHHHHhcCCEEEEEEec-CCCCeEEEEEEecCCCcceEEEecC--CCCCceEEEEEcCCHHHHH
Confidence            577999999999999999877 89876433211 12222 234443 223334444332  2467899999999999876


Q ss_pred             HHHHHh--cCCeEee
Q 024414          246 NFYEQA--FGMELLR  258 (268)
Q Consensus       246 ~FY~~v--lG~~~~~  258 (268)
                      +.+..+  .|.++.+
T Consensus        83 ~~~~~l~~~Gv~i~~   97 (143)
T cd07243          83 KAGDIISMNDVSIDI   97 (143)
T ss_pred             HHHHHHHHcCCceEE
Confidence            555443  6776553

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=95.50  E-value=0.22  Score=37.83  Aligned_cols=86  Identities=24%  Similarity=0.388  Sum_probs=58.7

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----------CCCceeEEEE
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------PEPLCQVMLR  237 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----------~~~l~~v~L~  237 (268)
                      +.|+++.|+|++++.+..++ .|.+...... .+..+....++ .+.+..++|++..+.           ...+.|+.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~-~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~   79 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEE-VPEQGVKVVFI-ALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIE   79 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCcccee-CCCCCcEEEEE-ecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEE
Confidence            46999999999999999975 7887643211 11222233333 334668888875321           2345699999


Q ss_pred             cCCHHHHHHHHHHhcCCeEee
Q 024414          238 VGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      |.|++++.+...+ .|.++..
T Consensus        80 v~di~~~~~~l~~-~G~~~~~   99 (128)
T TIGR03081        80 VDDIEAALETLKE-KGVRLID   99 (128)
T ss_pred             cCCHHHHHHHHHH-CCCcccC
Confidence            9999999998876 6887654

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=95.47  E-value=0.046  Score=45.11  Aligned_cols=83  Identities=31%  Similarity=0.365  Sum_probs=50.1

Q ss_pred             eeEEEEEECCHHHHHHHH-HHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----------------CCCc
Q 024414          170 FGHFGIAVDDVAKTVELI-KAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------PEPL  231 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L-~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----------------~~~l  231 (268)
                      +.|+.+.|+|++++.+++ ++.|+++... ...+.+++....+.=++| .|||+...++                 ...+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~g-g~h~~~GT~N~li~f~~~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~   78 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPG-GEHPGWGTANALIPFGDG-YLELIAIDPEAPAPDRGRWFGLDRLAGGEGL   78 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEE-EE-TTT-EEEEEEE-SSS-EEEEEEES-HHHSTGGGT-TTTHHHHT--EE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCC-CcCCCCccEEEEEeeCCc-eEEEEEeCCcccccccccceechhhcCCCCe
Confidence            469999999999999999 8889988755 344443455555555778 9999986531                 1345


Q ss_pred             eeEEEEcCCHHHHHHHHHHhcCCe
Q 024414          232 CQVMLRVGDLDRSINFYEQAFGME  255 (268)
Q Consensus       232 ~~v~L~v~d~~~s~~FY~~vlG~~  255 (268)
                      ..+.+.+.|+++..+-.++ .|++
T Consensus        79 ~~~~l~t~d~~~~~~~l~~-~G~~  101 (175)
T PF13468_consen   79 YGWALRTDDIEAVAARLRA-AGLD  101 (175)
T ss_dssp             EEEEEE-S-HHHHHHHHHT-TT-E
T ss_pred             EEEEEecCCHHHHHHHHHh-cCCC
Confidence            6889999999999999976 7764

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=95.43  E-value=0.27  Score=38.04  Aligned_cols=85  Identities=22%  Similarity=0.266  Sum_probs=56.0

Q ss_pred             eEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECC-CCCEEEEEEeCCCCCCceeEEEEcCCHHHHHHHH
Q 024414          171 GHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDP-DGYKFELLERGPTPEPLCQVMLRVGDLDRSINFY  248 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DP-dG~~iEl~e~~~~~~~l~~v~L~v~d~~~s~~FY  248 (268)
                      .||+|.|.|++++.+.+.+ .|.++..... .+ +.....++... .+..+.+.... ....+.|+.+.|.|.++..+++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~hl~~~v~d~~~~~~~~   77 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVG-DP-GVDAAAFLRCDEDHHDLALFPGP-ERPGLHHVAFEVESLDDILRAA   77 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEc-cC-CceeEEEEEcCCCcceEEEEcCC-CCCCeeEEEEEcCCHHHHHHHH
Confidence            3899999999999998876 7988754321 11 22234455543 34456666543 2567899999999987655555


Q ss_pred             HHh--cCCeEee
Q 024414          249 EQA--FGMELLR  258 (268)
Q Consensus       249 ~~v--lG~~~~~  258 (268)
                      +++  .|.++..
T Consensus        78 ~~l~~~G~~i~~   89 (131)
T cd08343          78 DRLAANGIQIEF   89 (131)
T ss_pred             HHHHHcCCeeEE
Confidence            543  5676543

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=95.15  E-value=0.37  Score=39.10  Aligned_cols=85  Identities=19%  Similarity=0.200  Sum_probs=53.0

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC-CCEEEEEEeCCCCCCceeEEEEcCCHHHHH
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD-GYKFELLERGPTPEPLCQVMLRVGDLDRSI  245 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd-G~~iEl~e~~~~~~~l~~v~L~v~d~~~s~  245 (268)
                      .++.|+++.|+|+++..+...+ .|.++..... .+.+.....++...+ .+.+.+.+.  ....+.|+.+.|.|.+...
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~-~~~~~~~~~~l~~~~~~~~i~l~~~--~~~~~~Hiaf~v~~~~~v~   78 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTE-DDDGTTWAAWLHRKGGVHDTALTGG--NGPRLHHVAFWVPEPHNII   78 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEec-cCCCcEEEEEEecCCCcceEEEecC--CCCceeEEEEEcCCHHHHH
Confidence            3578999999999999999877 7887653211 112233345554433 333544432  2246889999998866666


Q ss_pred             HHHHHh--cCCe
Q 024414          246 NFYEQA--FGME  255 (268)
Q Consensus       246 ~FY~~v--lG~~  255 (268)
                      +.+.++  .|..
T Consensus        79 ~~~~~L~~~G~~   90 (161)
T cd07256          79 RTCDLLAAAGYS   90 (161)
T ss_pred             HHHHHHHHcCCC
Confidence            555444  4554

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.90  E-value=0.43  Score=35.74  Aligned_cols=82  Identities=18%  Similarity=0.189  Sum_probs=56.6

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC--------CCCCceeEEEEcC
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------TPEPLCQVMLRVG  239 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~--------~~~~l~~v~L~v~  239 (268)
                      ++.|+.+.|+|+++..+..++ .|.+.......  .+   ...+.- ++..+++.+...        ....+.|+.+.+.
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~--~~---~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~~~   76 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFGEE--VG---RKALRF-GSQKINLHPVGGEFEPAAGSPGPGSDDLCLITE   76 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeeccccc--CC---ceEEEe-CCEEEEEecCCCccCcCccCCCCCCceEEEEec
Confidence            578999999999999999988 79887644221  01   122332 235677776432        1245789999996


Q ss_pred             C-HHHHHHHHHHhcCCeEe
Q 024414          240 D-LDRSINFYEQAFGMELL  257 (268)
Q Consensus       240 d-~~~s~~FY~~vlG~~~~  257 (268)
                      + ++++.+.+.+ .|.++.
T Consensus        77 ~~~~~~~~~l~~-~G~~~~   94 (125)
T cd07253          77 PPIDELVAHLEA-HGVPIE   94 (125)
T ss_pred             ccHHHHHHHHHH-CCceee
Confidence            4 8998888877 687754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=94.66  E-value=0.55  Score=37.37  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=54.6

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECC-CCCEEEEEEeCCCCCCceeEEEEcCCHHHHH
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDP-DGYKFELLERGPTPEPLCQVMLRVGDLDRSI  245 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DP-dG~~iEl~e~~~~~~~l~~v~L~v~d~~~s~  245 (268)
                      ..+.|+.+.|+|++++.+..++ .|..+....     +. ...++... .+..+.+....  ...+.|+.+.|.|+++..
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~-----~~-~~~~l~~~~~~~~~~l~~~~--~~~~~hiaf~v~d~~~l~   74 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWL-----GD-QMAFLRCNSDHHSIAIARGP--HPSLNHVAFEMPSIDEVM   74 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEee-----CC-eEEEEECCCCcceEEEccCC--CCceEEEEEECCCHHHHH
Confidence            3678999999999999998866 787764221     11 23455533 34556665432  356889999999999998


Q ss_pred             HHHHHh--cCCeE
Q 024414          246 NFYEQA--FGMEL  256 (268)
Q Consensus       246 ~FY~~v--lG~~~  256 (268)
                      +++.++  .|.++
T Consensus        75 ~~~~~l~~~Gi~~   87 (144)
T cd07239          75 RGIGRMIDKGIDI   87 (144)
T ss_pred             HHHHHHHHcCCce
Confidence            766554  44443

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.24  E-value=0.15  Score=38.37  Aligned_cols=90  Identities=14%  Similarity=0.198  Sum_probs=41.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC--CC-CCCCCCeeEEEEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DK-YDIGTGFGHFGIA  176 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~-~~~g~g~~hi~f~  176 (268)
                      .+.-|.|.|+| +++.+||.++||-+.    +                   +.+.+.+..+.  .- ....=++..+-|.
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~----~-------------------~~l~f~ea~G~DL~~~~~~twDLe~Lkf~   60 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL----P-------------------FFLTFQEAQGPDLTIENNETWDLEMLKFQ   60 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH----T-------------------TTEEEEE---CCGSS-TTSBSSEEEEEEE
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC----C-------------------ceEEEeeccCCccccCCCcEEeeEEEEEE
Confidence            45678999999 889999999886211    0                   01111111111  10 1111266678889


Q ss_pred             EC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEE
Q 024414          177 VD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  221 (268)
Q Consensus       177 V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl  221 (268)
                      |+   |+.++.+++.+.++ +.       +...+.+.+.||+|+.|.|
T Consensus        61 V~~~~Dl~~L~~~le~~~~-fi-------dKk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   61 VPKDFDLAALKSHLEEQEF-FI-------DKKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             ES-S--HHHHHHHTTTS-E-E---------TT-SEEEEE-TTS-EEEE
T ss_pred             ecCcccHHHHHHHhcccce-Ee-------cCCceEEEEECCcceEEEe
Confidence            98   57888888877332 11       1234678889999987765

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=93.93  E-value=0.72  Score=36.65  Aligned_cols=80  Identities=13%  Similarity=0.163  Sum_probs=51.9

Q ss_pred             EEEEEECCHHHHHHHH-HHcCCeEeeCCcccCCCCeEEEEEECCCC-CEEEEEEeCCCCCCceeEEEEcCCHHHHHHHHH
Q 024414          172 HFGIAVDDVAKTVELI-KAKGGKVTREPGPVKGGNTVIAFIEDPDG-YKFELLERGPTPEPLCQVMLRVGDLDRSINFYE  249 (268)
Q Consensus       172 hi~f~V~Did~~~~~L-~~~G~~i~~~p~~~~~G~~~~~~~~DPdG-~~iEl~e~~~~~~~l~~v~L~v~d~~~s~~FY~  249 (268)
                      |+.+.|+|+++..+.+ .-.|.+.....    .  ...+|++...+ ....+....+....+.|+.+.|.|.+...+++.
T Consensus         2 Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~----~--~~~~~l~~~~~~~~h~~~~~~~~~~gl~Hiaf~v~~~~~v~~~~~   75 (141)
T cd07258           2 HVVIGSENFEASRDSLVEDFGFRVSDLI----E--DRIVFMRCHPNPFHHTFAVGPASSSHFHHVNFMVTDIDDIGKALY   75 (141)
T ss_pred             cEEEecCCHHHHHHHHHhcCCCEeeeee----C--CEEEEEEcCCCCCcceeeeccCCCCceEEEEEECCCHHHHHHHHH
Confidence            8999999999999988 45788765331    1  13456663221 112222233345789999999998877666666


Q ss_pred             Hh--cCCeEe
Q 024414          250 QA--FGMELL  257 (268)
Q Consensus       250 ~v--lG~~~~  257 (268)
                      .+  .|.++.
T Consensus        76 ~l~~~G~~~~   85 (141)
T cd07258          76 RIKAHDVKVV   85 (141)
T ss_pred             HHHHCCCcEE
Confidence            54  576653

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.60  E-value=3.1  Score=33.34  Aligned_cols=98  Identities=16%  Similarity=0.326  Sum_probs=56.7

Q ss_pred             CCHHHHHHHHHhhcCC-EEE--EEecCC-----CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC-
Q 024414          109 GDLDRTIKFYTECLGM-KLL--RKRDIP-----EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD-  179 (268)
Q Consensus       109 ~Dle~a~~FY~~vLG~-~~~--~~~~~~-----~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D-  179 (268)
                      .+.++|..||.++|-= ++.  .+.+.+     .+.+..+.+.++..   -.+. ........+....++ .+-+.++| 
T Consensus        14 ~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~---~f~~-ld~g~~~~f~fneA~-S~~v~~~~q   88 (151)
T COG3865          14 GNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQ---SFMA-LDGGPNTSFKFNEAF-SFQVACDDQ   88 (151)
T ss_pred             CcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCe---EEEE-EcCCCCcCCCcCccE-EEEEEcCCH
Confidence            8999999999999842 222  111111     22333344444421   1122 222222234444443 35566666 


Q ss_pred             --HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          180 --VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       180 --id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                        +|.++..|.+.|..           .....+++|-.|.-|+|+
T Consensus        89 ~E~Drlwnal~~~g~e-----------~~~cgW~kDKfGVSWQi~  122 (151)
T COG3865          89 EEIDRLWNALSDNGGE-----------AEACGWLKDKFGVSWQIV  122 (151)
T ss_pred             HHHHHHHHHHhccCcc-----------hhcceeEecccCcEEEEc
Confidence              77788888888862           124579999999999998

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=93.42  E-value=1.5  Score=34.37  Aligned_cols=80  Identities=19%  Similarity=0.368  Sum_probs=55.0

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----CCCceeEEEEcC--C
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----PEPLCQVMLRVG--D  240 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----~~~l~~v~L~v~--d  240 (268)
                      ++.|+++.|+|++++.+...+ .|.++...      +. ..+++.. .|..+.+......     ...+.|+.+.+.  |
T Consensus         4 ~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~------~~-~~~~~~~-~g~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~d   75 (139)
T PRK04101          4 GINHICFSVSNLEKSIEFYEKVLGAKLLVK------GR-KTAYFDL-NGLWIALNEEKDIPRNEIHQSYTHIAFSIEEED   75 (139)
T ss_pred             cEEEEEEEecCHHHHHHHHHhccCCEEEee------cC-eeEEEec-CCeEEEeeccCCCCCccCCCCeeEEEEEecHHH
Confidence            678999999999999998865 78776432      11 2344443 5677777654321     234679999886  8


Q ss_pred             HHHHHHHHHHhcCCeEe
Q 024414          241 LDRSINFYEQAFGMELL  257 (268)
Q Consensus       241 ~~~s~~FY~~vlG~~~~  257 (268)
                      +++..+...+ .|.++.
T Consensus        76 v~~~~~~l~~-~G~~i~   91 (139)
T PRK04101         76 FDHWYQRLKE-NDVNIL   91 (139)
T ss_pred             HHHHHHHHHH-CCceEc
Confidence            8888887766 677654

>PRK10291 glyoxalase I; Provisional

Probab=93.30  E-value=1.4  Score=33.89  Aligned_cols=82  Identities=16%  Similarity=0.149  Sum_probs=54.4

Q ss_pred             EEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECC---CCCEEEEEEeCCC-----CCCceeEEEEcCCHHHH
Q 024414          174 GIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDP---DGYKFELLERGPT-----PEPLCQVMLRVGDLDRS  244 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DP---dG~~iEl~e~~~~-----~~~l~~v~L~v~d~~~s  244 (268)
                      ++.|.|+++..+...+ .|.++..... .+....+.+++...   .+..+++....+.     ...+.|+.+.|.|++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~   79 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSE-NPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEA   79 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeec-CCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHH
Confidence            4789999999998866 8988754322 22223345555432   2345676543221     23588999999999999


Q ss_pred             HHHHHHhcCCeEe
Q 024414          245 INFYEQAFGMELL  257 (268)
Q Consensus       245 ~~FY~~vlG~~~~  257 (268)
                      .+..++ .|.++.
T Consensus        80 ~~~l~~-~G~~~~   91 (129)
T PRK10291         80 CEKIRQ-NGGNVT   91 (129)
T ss_pred             HHHHHH-cCCccc
Confidence            888866 777654

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=93.03  E-value=1.4  Score=33.21  Aligned_cols=83  Identities=16%  Similarity=0.121  Sum_probs=48.0

Q ss_pred             eeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC--------C--CCCCceeEEEEcC
Q 024414          170 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG--------P--TPEPLCQVMLRVG  239 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~--------~--~~~~l~~v~L~v~  239 (268)
                      +.|+++.|+|+++..+...+.|.++.....     ....+.+..++|..+.+....        .  ....-.++.+.+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~LGf~~~~~~~-----~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRRLGFDFPEEAD-----DEPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHHhCceecCCcC-----CCCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            358999999999999999888987642211     012234454556555543321        1  1122346777776


Q ss_pred             CHHHHHHHHHHh--cCCeEe
Q 024414          240 DLDRSINFYEQA--FGMELL  257 (268)
Q Consensus       240 d~~~s~~FY~~v--lG~~~~  257 (268)
                      +.+...+.|+++  .|.++.
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~   95 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGH   95 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcC
Confidence            555555555544  465543

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=92.99  E-value=0.44  Score=38.78  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=32.7

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCce-eEEEEee
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY-TNAFLGY  144 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~  144 (268)
                      .++++||+|.|+|+.++..-+++ +|.+...+.  .++.. ..+|+.-
T Consensus       113 prGfgHIci~V~di~sac~~lke-kGV~f~Kk~--~dGk~K~iaF~~d  157 (170)
T KOG2944|consen  113 PRGFGHICIEVDDINSACERLKE-KGVRFKKKL--KDGKMKPIAFLHD  157 (170)
T ss_pred             CCccceEEEEeCCHHHHHHHHHH-hCceeeecC--CCccccceeEEEC
Confidence            36999999999999999999987 999955443  33333 3455543

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.61  E-value=2.3  Score=31.88  Aligned_cols=82  Identities=20%  Similarity=0.276  Sum_probs=50.6

Q ss_pred             eEEEEEECCHHHHHHHHHHc-CCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC-CCceeEEEEcCCHHHHHHHH
Q 024414          171 GHFGIAVDDVAKTVELIKAK-GGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRSINFY  248 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~~-G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~-~~l~~v~L~v~d~~~s~~FY  248 (268)
                      .|+.+.|+|++++.+...+. |.+.....    .+  ...+...-.+..+.+......+ ..+.|+.+.+.|.+...++|
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~f~v~~~~dl~~~~   76 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVR----DD--YAKFLLEDPRLNFVLNERPGAPGGGLNHLGVQVDSAEEVAEAK   76 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEeccc----CC--eeEEEecCCceEEEEecCCCCCCCCeeEEEEEeCCHHHHHHHH
Confidence            38999999999999988774 77654321    11  1223222233334444333223 47889999999977766666


Q ss_pred             HHhc--CCeEee
Q 024414          249 EQAF--GMELLR  258 (268)
Q Consensus       249 ~~vl--G~~~~~  258 (268)
                      +++-  |.++..
T Consensus        77 ~~l~~~G~~~~~   88 (120)
T cd07254          77 ARAEAAGLPTFK   88 (120)
T ss_pred             HHHHHcCCeEEc
Confidence            6654  766543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.38  E-value=3.2  Score=30.67  Aligned_cols=78  Identities=19%  Similarity=0.254  Sum_probs=54.4

Q ss_pred             EEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC--CCEEEEEEeCCCCCCceeEEEEcCCHHHHHHHHH
Q 024414          173 FGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLERGPTPEPLCQVMLRVGDLDRSINFYE  249 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd--G~~iEl~e~~~~~~~l~~v~L~v~d~~~s~~FY~  249 (268)
                      ..+.|+|+++..+..++ .|.+....     .+  ...++..+.  +..+.+...........|+.+.|.|++++.+-+.
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~~~l~   76 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD-----HG--WIATFASPQNMTVQVSLATEGGTATVVPDLSIEVDDVDAALARAV   76 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc-----CC--ceEEEeecCCCCcEEEEecCCCCCCCCCEEEEEeCCHHHHHHHHH
Confidence            46789999999999987 89886432     22  234444333  4556776554444456799999999999988886


Q ss_pred             HhcCCeEee
Q 024414          250 QAFGMELLR  258 (268)
Q Consensus       250 ~vlG~~~~~  258 (268)
                      + .|.++..
T Consensus        77 ~-~G~~~~~   84 (112)
T cd07238          77 A-AGFAIVY   84 (112)
T ss_pred             h-cCCeEec
Confidence            6 7877654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.02  E-value=0.13  Score=38.95  Aligned_cols=26  Identities=27%  Similarity=0.507  Sum_probs=21.9

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          234 VMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       234 v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      ..|.|.|++++.+||++ |||++....
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~   30 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN   30 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC
Confidence            45789999999999988 899986653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.74  E-value=2.5  Score=32.03  Aligned_cols=81  Identities=16%  Similarity=0.143  Sum_probs=51.1

Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC------------CCCCCceeEEEEc
Q 024414          171 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG------------PTPEPLCQVMLRV  238 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~------------~~~~~l~~v~L~v  238 (268)
                      ..+.+.|.|+++..+-.+..|.+....   ...+..  ..+.-.++..+.+.+..            +.+....|+.+.|
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~~---~~~~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v   76 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNPQ---FSDEKA--ACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSA   76 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEccc---cCCCCe--EEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeC
Confidence            368999999999999998888876421   111111  22322345667776532            1123356889999


Q ss_pred             CCHHHHHHHHHHh--cCCeE
Q 024414          239 GDLDRSINFYEQA--FGMEL  256 (268)
Q Consensus       239 ~d~~~s~~FY~~v--lG~~~  256 (268)
                      .+.+...++|+++  .|-++
T Consensus        77 ~~~~~vd~~~~~l~~~G~~i   96 (124)
T cd09012          77 DSREEVDELVEKALAAGGKE   96 (124)
T ss_pred             CCHHHHHHHHHHHHHCCCcc
Confidence            9877777777765  45544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=91.26  E-value=2  Score=33.33  Aligned_cols=79  Identities=18%  Similarity=0.285  Sum_probs=51.6

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----CCCceeEEEEcCC--H
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----PEPLCQVMLRVGD--L  241 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----~~~l~~v~L~v~d--~  241 (268)
                      +.|+++.|+|++++.+...+ .|..+...      +.. ..++.- .|..+++.+....     ...+.|+.+.+.+  +
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~------~~~-~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~dl   72 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVL------GEK-TAYFTI-GGTWLALNEEPDIPRNEIRQSYTHIAFTIEDSEF   72 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEecc------CCc-cceEee-CceEEEEEccCCCCcCCcCccceEEEEEecHHHH
Confidence            46999999999999998887 58776432      111 233433 4667777654432     2357799999864  6


Q ss_pred             HHHHHHHHHhcCCeEe
Q 024414          242 DRSINFYEQAFGMELL  257 (268)
Q Consensus       242 ~~s~~FY~~vlG~~~~  257 (268)
                      ++..+-..+ .|.++.
T Consensus        73 d~~~~~l~~-~G~~~~   87 (131)
T cd08363          73 DAFYTRLKE-AGVNIL   87 (131)
T ss_pred             HHHHHHHHH-cCCccc
Confidence            666666655 566643

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.78  E-value=4.7  Score=29.99  Aligned_cols=80  Identities=14%  Similarity=0.109  Sum_probs=50.2

Q ss_pred             eEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC-----------CCCCceeEEEEc
Q 024414          171 GHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-----------TPEPLCQVMLRV  238 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~-----------~~~~l~~v~L~v  238 (268)
                      .|+.+.|.|++++.+...+ .|.++...    +.+  ...++.-.++..+.+++...           ....+.|+.+.+
T Consensus         2 ~~~~l~v~d~~~s~~Fy~~~lG~~~~~~----~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           2 LETALYVDDLEAAEAFYEDVLGLELMLK----EDR--RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             eEEEEEeCCHHHHHHHHHhccCCEEeec----CCC--ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            4799999999999999975 78887642    122  23455544556666666431           124678999998


Q ss_pred             C--CHHHHHHHHHHhcCCeEe
Q 024414          239 G--DLDRSINFYEQAFGMELL  257 (268)
Q Consensus       239 ~--d~~~s~~FY~~vlG~~~~  257 (268)
                      .  |+++..+-..+ .|.++.
T Consensus        76 ~~~dl~~~~~~l~~-~g~~~~   95 (122)
T cd08354          76 PAEELAEWEAHLEA-KGVAIE   95 (122)
T ss_pred             CHHHHHHHHHHHHh-cCCcee
Confidence            5  45555444433 444443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.59  E-value=8.5  Score=30.12  Aligned_cols=87  Identities=16%  Similarity=0.109  Sum_probs=52.8

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccC----------CCCeEEEEEE---CCCCCEEEEEEeCCC---CCCce
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVK----------GGNTVIAFIE---DPDGYKFELLERGPT---PEPLC  232 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~----------~G~~~~~~~~---DPdG~~iEl~e~~~~---~~~l~  232 (268)
                      +.|+++.|.|+++.++-..+ .|.+.........          .|.....++.   +..+..+|+......   +..-+
T Consensus         3 ~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~~   82 (127)
T cd08358           3 ALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGND   82 (127)
T ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCCC
Confidence            56999999999999999965 7998754321111          1222223342   345668999864421   21224


Q ss_pred             eEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          233 QVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       233 ~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      |+.|.+.+.+ ..+..+ -.|+.+.+
T Consensus        83 ~~hlav~~~d-~~~~l~-~~Gv~~~~  106 (127)
T cd08358          83 FLGITIHSKQ-AVSNAK-KHNWPVTE  106 (127)
T ss_pred             EEEEEEECHH-HHHHHH-HCCCceec
Confidence            7777887774 334443 37877665

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=88.91  E-value=3.8  Score=30.17  Aligned_cols=77  Identities=17%  Similarity=0.349  Sum_probs=49.4

Q ss_pred             EEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---CCCceeEEEEcC--CHHHHH
Q 024414          172 HFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---PEPLCQVMLRVG--DLDRSI  245 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---~~~l~~v~L~v~--d~~~s~  245 (268)
                      |+++.|+|++++.+...+ .|.......    .+   ..++.- .+..+.+......   ...+.|+.+.+.  |+++..
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~----~~---~~~~~~-~~~~l~~~~~~~~~~~~~~~~hiaf~v~~~d~~~~~   72 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSS----SK---EAYFEL-AGLWICLMEEDSLQGPERTYTHIAFQIQSEEFDEYT   72 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeecc----Cc---eeEEEe-cCeEEEeccCCCcCCCCCCccEEEEEcCHHHHHHHH
Confidence            789999999999998887 676654321    11   123333 2566666544322   356789999984  566666


Q ss_pred             HHHHHhcCCeEe
Q 024414          246 NFYEQAFGMELL  257 (268)
Q Consensus       246 ~FY~~vlG~~~~  257 (268)
                      +-..+ .|.++.
T Consensus        73 ~~l~~-~G~~~~   83 (113)
T cd08345          73 ERLKA-LGVEMK   83 (113)
T ss_pred             HHHHH-cCCccC
Confidence            66655 677754

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=88.76  E-value=6.8  Score=29.49  Aligned_cols=80  Identities=19%  Similarity=0.223  Sum_probs=49.9

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC--CCCCCceeEEEEc--CCHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG--PTPEPLCQVMLRV--GDLDR  243 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~--~~~~~l~~v~L~v--~d~~~  243 (268)
                      |+.|+.+.|+|++++.+...+ .|.+.....   +  ..  .++. .+|..+.+....  +....+.|+.+.+  .|+++
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~---~--~~--~~~~-~~~~~~~l~~~~~~~~~~~~~hi~f~v~~~dl~~   72 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRW---D--KG--AYLE-AGDLWLCLSVDANVGPAKDYTHYAFSVSEEDFAS   72 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEec---C--Cc--eEEe-cCCEEEEEecCCCCCCCCCeeeEEEEeCHHHHHH
Confidence            467999999999999998876 788764321   1  11  2333 234455553322  1235678999988  45666


Q ss_pred             HHHHHHHhcCCeEe
Q 024414          244 SINFYEQAFGMELL  257 (268)
Q Consensus       244 s~~FY~~vlG~~~~  257 (268)
                      ..+...+ .|.++.
T Consensus        73 ~~~~l~~-~G~~~~   85 (121)
T cd07244          73 LKEKLRQ-AGVKEW   85 (121)
T ss_pred             HHHHHHH-cCCccc
Confidence            6666655 466543

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK11700 hypothetical protein; Provisional

Probab=87.13  E-value=9.7  Score=31.94  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=45.5

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCC-EEEEEecCCCCceeEEEE----eeCCCCceEEEEEeeccCCCCCCCCCCeeE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFL----GYGPEDSHFVIELTYNYGVDKYDIGTGFGH  172 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~-~~~~~~~~~~~~~~~~~l----~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  172 (268)
                      ...++||+++|.+.+.|.+|.+..+-. ++.......+.....+-+    .+++.. .-++|+.++.. ..| .-.|--|
T Consensus        37 ~~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~w~-I~cvELP~P~~-k~Y-p~eGWEH  113 (187)
T PRK11700         37 QLEADHIALRCNQNETAERWRQGFLQCGELLSENIINGRPICLFELDQPLQVGHWS-IDCVELPYPGE-KRY-PHEGWEH  113 (187)
T ss_pred             cccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcE-EEEEEeCCCCC-CCC-CCCCceE
Confidence            456899999999999999999887633 222222222211111111    222222 23577776543 223 3357889


Q ss_pred             EEEEECC
Q 024414          173 FGIAVDD  179 (268)
Q Consensus       173 i~f~V~D  179 (268)
                      |-+.++-
T Consensus       114 IElVlp~  120 (187)
T PRK11700        114 IELVLPG  120 (187)
T ss_pred             EEEEecC
Confidence            9999983

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.67  E-value=12  Score=27.49  Aligned_cols=79  Identities=19%  Similarity=0.218  Sum_probs=49.7

Q ss_pred             EEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC------CCCceeEEEEcCCHHHHH
Q 024414          173 FGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------PEPLCQVMLRVGDLDRSI  245 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~------~~~l~~v~L~v~d~~~s~  245 (268)
                      +-+.|.|++++.+..++ .|......     .+.  ...+..++|..+.+++....      .....|+.+.+.+.+...
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~-----~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   74 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVEL-----SPT--FALFVLGSGVKLGLWSRHTVEPASDATGGGSELAFMVDDGAAVD   74 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCC-----CCc--eEEEEeCCCcEEEEeeccccCCCCCCCCCceEEEEEcCCHHHHH
Confidence            56889999999888865 67654321     111  24455567888888876531      234679999998755555


Q ss_pred             HHHHH--hcCCeEee
Q 024414          246 NFYEQ--AFGMELLR  258 (268)
Q Consensus       246 ~FY~~--vlG~~~~~  258 (268)
                      +.+.+  -.|-++..
T Consensus        75 ~~~~~~~~~g~~v~~   89 (114)
T cd07261          75 ALYAEWQAKGVKIIQ   89 (114)
T ss_pred             HHHHHHHHCCCeEec
Confidence            55543  25655543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=85.60  E-value=7.8  Score=32.51  Aligned_cols=89  Identities=19%  Similarity=0.248  Sum_probs=45.6

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCC-EEEEEecCCCCceeEEEE----eeCCCCceEEEEEeeccCCCCCCCCCCee
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFL----GYGPEDSHFVIELTYNYGVDKYDIGTGFG  171 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~-~~~~~~~~~~~~~~~~~l----~~g~~~~~~~lel~~~~~~~~~~~g~g~~  171 (268)
                      ....+|||+++|.+.+.|.+|-+..+-. ++.......+......-+    .+++. ..-++|+.++.. ..| .-.|--
T Consensus        31 ~~~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~-~I~~vELP~P~~-K~Y-p~eGWE  107 (185)
T PF06185_consen   31 SQYEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGW-SIDCVELPYPKD-KRY-PQEGWE  107 (185)
T ss_dssp             TT-EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTE-EEEEEEEE---S-S---SS-EEE
T ss_pred             cccCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCe-eEEEEEeCCCCC-CCC-CCCCce
Confidence            3557899999999999999999998854 333333323322212222    22322 223577776544 222 335888


Q ss_pred             EEEEEECC-HHHHHHHHH
Q 024414          172 HFGIAVDD-VAKTVELIK  188 (268)
Q Consensus       172 hi~f~V~D-id~~~~~L~  188 (268)
                      ||-|.++- .+...+++.
T Consensus       108 HIE~Vip~~~~~~~~~~~  125 (185)
T PF06185_consen  108 HIEFVIPSDAQTLLEQAL  125 (185)
T ss_dssp             EEEEE--S-GGGHHHHHH
T ss_pred             EEEEEecCCHHHHHHHHH
Confidence            99999983 444444443

; PDB: 1K4N_A.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.41  E-value=12  Score=30.17  Aligned_cols=76  Identities=20%  Similarity=0.314  Sum_probs=43.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCC-EEEEEecCCCCceeEEEE----eeCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFL----GYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~-~~~~~~~~~~~~~~~~~l----~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      +|||+++|.+.+.|.+|.+..+-. ++.......+.....+-+    .+++.. .-++||.++.. ..| .-.|--||-+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~~~-I~cvELP~P~~-k~Y-p~eGWEHIE~   78 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGRPIALIKLEKPLQFAGWS-ISIVELPFPKD-KKY-PQEGWEHIEI   78 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcE-EEEEEeCCCCC-CCC-CCCCceEEEE
Confidence            689999999999999999987743 222222222211111111    222222 23567776543 222 3458889999


Q ss_pred             EECC
Q 024414          176 AVDD  179 (268)
Q Consensus       176 ~V~D  179 (268)
                      .++-
T Consensus        79 Vlp~   82 (149)
T cd07268          79 VIPS   82 (149)
T ss_pred             EecC
Confidence            9983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.02  E-value=13  Score=27.35  Aligned_cols=78  Identities=19%  Similarity=0.292  Sum_probs=46.0

Q ss_pred             EEEEECCHHHHHHHHHHc-CCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC--------C-C--CCceeEEEEcC-
Q 024414          173 FGIAVDDVAKTVELIKAK-GGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------T-P--EPLCQVMLRVG-  239 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~~-G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~--------~-~--~~l~~v~L~v~-  239 (268)
                      |.|.|+|++++.+...+. |..+...    +.+  ...++.. +|..+++++...        . +  ..-.++.+.+. 
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~----~~~--~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD----SND--GVAFFQL-GGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRS   74 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc----CCC--ceEEEEc-CCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCC
Confidence            689999999999998876 8776433    111  2344444 777888876431        0 1  12234555554 


Q ss_pred             --CHHHHHHHHHHhcCCeEee
Q 024414          240 --DLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       240 --d~~~s~~FY~~vlG~~~~~  258 (268)
                        |++++.+-..+ .|.++..
T Consensus        75 ~~d~~~~~~~l~~-~G~~~~~   94 (121)
T cd07251          75 EEEVDAVLARAAA-AGATIVK   94 (121)
T ss_pred             HHHHHHHHHHHHh-CCCEEec
Confidence              55555555544 5666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=83.37  E-value=15  Score=26.63  Aligned_cols=75  Identities=20%  Similarity=0.232  Sum_probs=52.6

Q ss_pred             EEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC----CCceeEEEEcCCHHHHHHHH
Q 024414          174 GIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP----EPLCQVMLRVGDLDRSINFY  248 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~----~~l~~v~L~v~d~~~s~~FY  248 (268)
                      .+.|.|+++..+-.++ .|.++.....   . . ...++.. ++..+.|.+.....    ..-.|+.+.+.|+++..+-.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~---~-~-~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP---E-P-GYAFLSR-GGAQLMLSEHDGDEPVPLGRGGSVYIEVEDVDALYAEL   76 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC---C-C-cEEEEEe-CCEEEEEeccCCCCCCCCCCcEEEEEEeCCHHHHHHHH
Confidence            5789999999999998 8988754321   1 1 2344444 56777777655431    24457889999999999988


Q ss_pred             HHhcCCe
Q 024414          249 EQAFGME  255 (268)
Q Consensus       249 ~~vlG~~  255 (268)
                      .+ .|.+
T Consensus        77 ~~-~G~~   82 (112)
T cd08349          77 KA-KGAD   82 (112)
T ss_pred             HH-cCCc
Confidence            77 6776

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.12  E-value=16  Score=26.89  Aligned_cols=83  Identities=17%  Similarity=0.113  Sum_probs=53.2

Q ss_pred             EEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-------CCCceeEEEEcCCHHHH
Q 024414          173 FGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-------PEPLCQVMLRVGDLDRS  244 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-------~~~l~~v~L~v~d~~~s  244 (268)
                      ..|.|.|++++.+...+ .|.++..... .+.+.....++.- .|..+.+++..+.       .....|+.+.|.|+++.
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~l~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMP-DDDGRVMHAELRI-GDSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEe-CCCCCEEEEEEEE-CCEEEEEecCCcccCCCCCCCCceEEEEEEeCCHHHH
Confidence            56889999999999875 7987654322 1223223333433 4557777765432       23457899999999987


Q ss_pred             HHHHHHhcCCeEee
Q 024414          245 INFYEQAFGMELLR  258 (268)
Q Consensus       245 ~~FY~~vlG~~~~~  258 (268)
                      .+-..+ .|.++..
T Consensus        83 ~~~l~~-~G~~~~~   95 (122)
T cd07246          83 FARAVA-AGATSVM   95 (122)
T ss_pred             HHHHHH-CCCeEec
Confidence            776654 4766543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=83.00  E-value=1.3  Score=40.80  Aligned_cols=28  Identities=39%  Similarity=0.667  Sum_probs=25.1

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeE
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMEL  256 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~  256 (268)
                      ...-+|+|.|.|++++.+||+++||+..
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~  273 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC  273 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC
Confidence            4567999999999999999999999873

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=81.19  E-value=19  Score=26.62  Aligned_cols=78  Identities=23%  Similarity=0.210  Sum_probs=47.6

Q ss_pred             EEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC------------CCCCCceeEE--E
Q 024414          172 HFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG------------PTPEPLCQVM--L  236 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~------------~~~~~l~~v~--L  236 (268)
                      |+.|.|+|+++..+...+ .|..+.....      . .+++ +..|..+.+....            .....+.|+.  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~-~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------T-WVDF-DFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------C-cccc-cccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            899999999999999986 7987753311      0 1112 2234444333211            0112345654  4


Q ss_pred             EcCCHHHHHHHHHHhcCCeEee
Q 024414          237 RVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       237 ~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      .+.|+++..+...+ .|.++..
T Consensus        74 ~~~dv~~~~~~l~~-~g~~~~~   94 (125)
T cd08357          74 SEEEFDALAERLEA-AGVEFLI   94 (125)
T ss_pred             eHHHHHHHHHHHHH-CCCcEec
Confidence            56889988888877 7877653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	268
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		3e-43
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-07
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		5e-30
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		1e-05
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		1e-21
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		1e-13
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		3e-13
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		3e-13
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		7e-13

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  171 bits (433), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 97/124 (78%)
Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 220 ELLE 223
           EL+E
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           L   MLRVGDL RSI+FY +  GM+LLR  +NPEYK
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYK 38

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           RRMLH + RVGDLDR+IKFYTE LGMK+LRK D+PE+KYT  FLGYGPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
           YGV  Y     +GH  I V+DV + V  ++     +  E       +  +AF+ DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED-----ESGFMAFVVDPDGYY 121
Query: 219 FELL 222
            ELL
Sbjct: 122 IELL 125

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           +   M+RVGDLDRSI FY +  GM++LRK D PE K
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDK 44

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-----------KYTNAFLGYGPE 147
           RR LH V++VG+  +T +FY + LGMK+LR  +  E            K++   +G+GPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 148 DSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV 207
           D HFV ELTYNYGV  Y +G  F    +A          ++           P+      
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEW----------PLTEVAEG 135
Query: 208 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           +   E P GYKF L  R  P  +P+ +V L V DL +S+N++    GM++    +  +  
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQRA 195
Query: 267 VL 268
           +L
Sbjct: 196 LL 197

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 30/148 (20%)
Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYG-----PEDSH----- 150
           +   + R+ D  +++ FYT  LG+ LL+K D P  K++  FL Y      P+D       
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 151 -----FVIELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKVTR 196
                  +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K  +
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151
Query: 197 EP--GPVKGGNTVIAFIEDPDGYKFELL 222
           +P  G +KG    +AFI+DPDGY  E+L
Sbjct: 152 KPDDGKMKG----LAFIQDPDGYWIEIL 175

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 34/150 (22%)
Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV-------- 152
           +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  ED + +        
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 153 ---------IELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKV 194
                    +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 195 TREP--GPVKGGNTVIAFIEDPDGYKFELL 222
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIEIL 174

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 34/150 (22%)
Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV-------- 152
           +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  ED + +        
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 92
Query: 153 ---------IELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKV 194
                    +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K 
Sbjct: 93  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 152
Query: 195 TREP--GPVKGGNTVIAFIEDPDGYKFELL 222
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 153 VKKPDDGKMKG----LAFIQDPDGYWIEIL 178

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 34/150 (22%)
Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV-------- 152
           +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  ED + +        
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 153 ---------IELTYNYGVD-----KYDIGT----GFGHFGIAVDDVAKTVELIKAKGGKV 194
                    +ELT+N+G +      Y  G     GFGH GIAV DV    +  +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 195 TREP--GPVKGGNTVIAFIEDPDGYKFELL 222
            ++P  G +KG    +AFI+DPDGY  ++L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIQIL 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	268
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-66
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	6e-12
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	5e-66
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	9e-12
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	7e-48
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-17
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-41
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	5e-09
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	8e-39
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-09
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	6e-35
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-09
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-34
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-08
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-33
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	8e-08
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	3e-32
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-06
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	8e-29
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	6e-06
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-28
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-04
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-26
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	3e-04
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-26
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-06
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	3e-26
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	3e-13
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-23
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-06
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	6e-22
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-06
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	6e-22
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	8e-04
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	7e-22
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	2e-04
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	5e-19
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	5e-05
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	6e-19
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	2e-18
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-06
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-18
3huh_A	152	Virulence protein STM3117; structural genomics, ny	1e-04
3ghj_A	141	Putative integron gene cassette protein; integron	3e-18
3ghj_A	141	Putative integron gene cassette protein; integron	4e-05
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	1e-17
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-04
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-17
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	9e-06
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-17
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	1e-04
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-17
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	2e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	5e-06
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	5e-16
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-05
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	7e-16
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	1e-15
1nki_A	135	Probable fosfomycin resistance protein; potassium	2e-15
1nki_A	135	Probable fosfomycin resistance protein; potassium	8e-05
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-15
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-05
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	4e-15
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	3e-08
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-15
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-14
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-14
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	7e-05
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	4e-14
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-13
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-13
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	2e-13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	6e-04
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	4e-13
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	6e-04
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	4e-13
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	2e-05
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	3e-06
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	2e-12
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	5e-05
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-11
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	1e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	1e-11
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-11
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	3e-11
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	9e-11
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	1e-06
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	1e-10
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	5e-10
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	2e-05
2i7r_A	118	Conserved domain protein; structural genomics cons	1e-09
2i7r_A	118	Conserved domain protein; structural genomics cons	6e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	1e-09
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	6e-04
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	1e-09
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	2e-09
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	4e-05
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	4e-09
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	3e-08
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	2e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-07
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	3e-07
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	6e-07
1xy7_A	166	Unknown protein; structural genomics, protein stru	9e-06
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	6e-05
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	1e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	2e-04
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	3e-04
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	4e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  202 bits (515), Expect = 2e-66
 Identities = 70/143 (48%), Positives = 84/143 (58%), Gaps = 5/143 (3%)

Query: 98  KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY 157
            RRMLH + RVGDLDR+IKFYTE LGMK+LRK D+PE+KYT  FLGYGPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 158 NYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 217
           NYGV  Y     +GH  I V+DV + V  ++     +  E          +AF+ DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGY 120

Query: 218 KFELLERGPTPEPLCQVMLRVGD 240
             ELL      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 60.9 bits (148), Expect = 6e-12
 Identities = 21/34 (61%), Positives = 25/34 (73%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
             M+RVGDLDRSI FY +  GM++LRK D PE K
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDK 44

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  201 bits (512), Expect = 5e-66
 Identities = 80/132 (60%), Positives = 98/132 (74%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 220 ELLERGPTPEPL 231
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 60.1 bits (146), Expect = 9e-12
 Identities = 22/34 (64%), Positives = 26/34 (76%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
             MLRVGDL RSI+FY +  GM+LLR  +NPEYK
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYK 38

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  156 bits (395), Expect = 7e-48
 Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 81  ASTSAAHESALEWVK-----KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE 135
           AS+    E+A               +   + R+ D  +++ FYT  LG+ LL+K D P  
Sbjct: 7   ASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAM 66

Query: 136 KYTNAFLGYGPED---------------SHFVIELTYNYGVD-----KYDIG----TGFG 171
           K++  FL Y  ++                   +ELT+N+G +      Y  G     GFG
Sbjct: 67  KFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFG 126

Query: 172 HFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL 231
           H GIAV DV    +  +  G K  ++P    G    +AFI+DPDGY  E+L        +
Sbjct: 127 HIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPNKIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 77.8 bits (191), Expect = 1e-17
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 11/73 (15%)

Query: 197 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 253
           EP P   G    T  +   DPD    + L        L Q MLR+ D  +S++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 254 MELLRKRDNPEYK 266
           + LL+K D P  K
Sbjct: 55  LTLLQKLDFPAMK 67

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  139 bits (352), Expect = 1e-41
 Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 6/137 (4%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           ++ H+   V  +   + FY   L +KLL   D+P +    AFL  G      +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 160 GVDKY--DIGTGFGHFGIAVDDVAKTVELIKAKGGKV-TREPGPVKGGNTVIAFI--EDP 214
            + K+    G G  H  I V  + + ++ +K  G ++   EP P   G   +AF+     
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 215 DGYKFELLERGPTPEPL 231
            G  +E  E+    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 53.3 bits (128), Expect = 5e-09
 Identities = 8/35 (22%), Positives = 15/35 (42%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
            + + V  +   + FY  +  ++LL   D P   V
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGV 45

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  131 bits (331), Expect = 8e-39
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R+ HV   V DL++   FY   LG ++     +PE   +  F+  G      +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 159 YGVDKY---DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--ED 213
             +  +   +   G  H  I VD++   V  +K K  +   E   +      + F+  +D
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKD 123

Query: 214 PDGYKFELLE 223
             G   EL +
Sbjct: 124 CGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
            V + V DL+++  FY+   G ++      PE+ V
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGV 42

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  121 bits (305), Expect = 6e-35
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF----VIE 154
           + + HV   V D D++ +FY   LG +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 155 LTYNYGVDKYDI---GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGN-TVIAF 210
             Y    ++        G  H    V+DV  + + + A G  +  E           +AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 211 IEDPDGYKFELLE 223
             DPDG   EL E
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPE 264
           V L V D D+S  FY    G E++R+   P+
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPK 39

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  119 bits (301), Expect = 2e-34
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           + + HV     +   T  FY E LG ++LR+   PE+      L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV-IAFIEDPDGY 217
                Y    G  H    V+ + + +  +  +G  +  EP  V       + F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 218 KFELLE 223
             EL E
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           V +   +   + NFY +  G E+LR+   PE  
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKN 41

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  118 bits (296), Expect = 2e-33
 Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 14/133 (10%)

Query: 100 RMLHVVYR--VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY 157
           ++L ++ R  V DL+  ++FY E L   +  + +IP+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 158 NYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 217
             G ++             VD + K    ++  G ++ R P  V  G      +   DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGS 111

Query: 218 KFELLERGPTPEP 230
             E +E       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 49.5 bits (118), Expect = 8e-08
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
             L V DL+ ++ FYE+     +  + + P+  V
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGV 43

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  114 bits (287), Expect = 3e-32
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           ++ H+ Y V ++D  +K +     ++          K    F+  G     + +EL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPD 62

Query: 160 GVDK-----YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-GNTVIAFIED 213
           G D         G+   H    V+D+ K++E +   G  + ++        N  +AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 214 PDGYKFELLER 224
            D    ELLE+
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 5/34 (14%), Positives = 15/34 (44%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
           +   V ++D ++  +++   +E      +   KV
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKV 44

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  106 bits (266), Expect = 8e-29
 Identities = 27/140 (19%), Positives = 43/140 (30%), Gaps = 12/140 (8%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--------KYTNAFLGYGPEDSH 150
           R++ H+   V D+  +  FY   LG+  L   ++P          K  N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 151 FVIELTYNYGVDKYDIGTGFGHFGIAVDD--VAKTVELIKAKGGKVTREPGPVKGGNTVI 208
           F          +     T   H    +D     + V +I      +    GPV       
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGPVTRPTGRG 135

Query: 209 AFIEDPDGYKFELLERGPTP 228
            +  DPDG+  E+       
Sbjct: 136 VYFYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 44.5 bits (105), Expect = 6e-06
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPE 264
           + L V D+  S  FY    G+  L   + P 
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPA 53

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score =  103 bits (258), Expect = 9e-28
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 5/127 (3%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+      V D  +   FYT  LG  +     +  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 160 GVDKYD---IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
            V  +    +  G      AVDD+A   E + A G + T+EP  +     V A ++D  G
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAILDDTCG 143

Query: 217 YKFELLE 223
              +L++
Sbjct: 144 NLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 40.9 bits (95), Expect = 1e-04
 Identities = 5/36 (13%), Positives = 12/36 (33%)

Query: 231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           +    + V D  ++ +FY    G  +         +
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADR 62

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score =  100 bits (250), Expect = 2e-26
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 22/144 (15%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRD-----------IPEEKYTNAFLGYGPE 147
            RM +V   V  LD  I F+ E +G+ L  + +           +  +    A +     
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP-- 66

Query: 148 DSHFVIELTYNYGVDKYDI-------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGP 200
           D H  IEL+                   G+      V+D+ + V  +   G ++  E   
Sbjct: 67  DGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV-V 125

Query: 201 VKGGNTVIAFIEDPDGYKFELLER 224
               +  + +I   +G    L E 
Sbjct: 126 QYENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDN 262
           V + V  LD +I+F+E   G+ L  + + 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANV 42

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 99.2 bits (247), Expect = 2e-26
 Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 9/127 (7%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           ++ HV     +L++  +FY    G       +   + + + FL +   +    +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRT 59

Query: 160 GVD--KYDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDP 214
            V         G+ H  I+           E ++  G  +  EP    G     + + DP
Sbjct: 60  DVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDP 118

Query: 215 DGYKFEL 221
           +G + E+
Sbjct: 119 EGNRIEI 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 44.5 bits (105), Expect = 3e-06
 Identities = 8/31 (25%), Positives = 12/31 (38%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPE 264
           V L   +L++   FY   FG       +N  
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKT 37

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  103 bits (257), Expect = 3e-26
 Identities = 35/168 (20%), Positives = 51/168 (30%), Gaps = 18/168 (10%)

Query: 108 VGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVDKYD 165
             D     KFYT   G        +P     Y+ A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 166 IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 225
           +   +  + IAVDDV   V+ +   GG+V      + G    ++FI DP G    L +  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 226 P--------TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
                        L    L     D ++ FYE   G+           
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ 199

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 66.9 bits (163), Expect = 3e-13
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 14/136 (10%)

Query: 93  WVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV 152
            +  +   ++         D  + FY   +G+          + Y     G         
Sbjct: 157 TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV----- 211

Query: 153 IELTYNYGVDKYDIGTGFGHFGI--AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAF 210
                  G  +  +     H+ +  AVDD   T     A GG+V  EP  +       A 
Sbjct: 212 ------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAV 264

Query: 211 IEDPDGYKFELLERGP 226
           + DP G  F +L+  P
Sbjct: 265 LSDPQGAIFSVLKAAP 280

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 91.2 bits (226), Expect = 4e-23
 Identities = 21/128 (16%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF----VIELTYNYGVD 162
              D++ +  F+ + LG ++  +R  P+E++   +L     D            +  G  
Sbjct: 12  YCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 163 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGP---VKGGNTVIA----FIEDPD 215
           ++ +G+G  +F   V D+    + +                 + G+++       ++ PD
Sbjct: 68  EFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 216 GYKFELLE 223
           GY F   +
Sbjct: 127 GYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 235 MLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
            L   D++ S +F+    G E+  +R + E+
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKYERPDEEF 40

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 88.3 bits (219), Expect = 6e-22
 Identities = 25/134 (18%), Positives = 39/134 (29%), Gaps = 14/134 (10%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV----IE 154
             ++       DLD    FY +  G++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 155 LTYNYGVDKYDIGTGFGHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI 211
                         G GHF    D   +V +     +A    V        G  +V  +I
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSV--YI 119

Query: 212 EDPDGYKFELLERG 225
            DP G   E+ E  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDN 262
             L   DLD +  FY   FG+E++ K   
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPG 40

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 87.7 bits (217), Expect = 6e-22
 Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 12/128 (9%)

Query: 102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV 161
           + +    G LD  I+FY E L +K + +       Y     G     + + +E T   G 
Sbjct: 13  IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLP--HADYHLEFTQYEGG 69

Query: 162 DKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDG 216
               +          V +   +A     +K  G +      P    GG T    IEDPDG
Sbjct: 70  STAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDG 125

Query: 217 YKFELLER 224
           ++   +  
Sbjct: 126 WRIVFMNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 38.0 bits (88), Expect = 8e-04
 Identities = 7/28 (25%), Positives = 12/28 (42%)

Query: 237 RVGDLDRSINFYEQAFGMELLRKRDNPE 264
             G LD  I FYE+   ++ + +     
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN 45

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 88.0 bits (218), Expect = 7e-22
 Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 5/118 (4%)

Query: 108 VGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIG 167
             D DR   FY +  G  +    +IP+  Y+    G   E          N G+ +    
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 168 TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 225
           T      + V+ +   +E I++ GGK      PV G     A+  D +G    L E  
Sbjct: 90  TTPVVT-VDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 227 TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
               +    +   D DR+  FY  AFG   + +  + +Y
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWA-IAEIPDMDY 59

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 79.5 bits (196), Expect = 6e-19
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV 161
           + V   VG  +    FY E +GM+ + K +   +K    +   G ++ H  +E  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPE-ELKKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 162 DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
                     H    V  + +  + +  +G +V  +            ++ DP G + E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDVIRF--YVSDPFGNRIEF 121

Query: 222 LER 224
           +E 
Sbjct: 122 MEN 124

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 78.4 bits (193), Expect = 2e-18
 Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 8/120 (6%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-EKYTNAFLGYGPEDSHFVIELTYNYGV 161
           H+ + V DL+R  +        + +   D  +       F   G       I +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 162 DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
              +       F I   D  +  E +   G  +      V+G    I F  D D + FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDDNHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 7/33 (21%), Positives = 12/33 (36%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYK 266
           +   V DL+R     E  F    +   D  ++ 
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFS 40

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 78.5 bits (193), Expect = 3e-18
 Identities = 27/125 (21%), Positives = 41/125 (32%), Gaps = 8/125 (6%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R+ H+V  V D+  TI+FY E LG   +  +           L +G +  +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA--FIEDPDG 216
                           I    +   V  I   G  +   P    G    I   +I DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 217 YKFEL 221
              E+
Sbjct: 136 NLIEI 140

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           ++L V D+  +I FYE+  G   +  + N + 
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVTFKQNRKA 58

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 78.1 bits (193), Expect = 3e-18
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 19/127 (14%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           + +  V  +V +L+++ +FYTE LG +          ++   ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 159 YGVDKYDIGTGFGHFGIAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIA--FIEDP 214
           +            HF   V+  ++    + +++KG  V    GPV          +  DP
Sbjct: 84  WQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADP 131

Query: 215 DGYKFEL 221
           +G+  E 
Sbjct: 132 NGHALEF 138

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           V ++V +L++S  FY +  G E         +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRW 63

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 76.5 bits (188), Expect = 1e-17
 Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 13/131 (9%)

Query: 99  RRML-HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY 157
           + ML HV   V  L+ +I F+   LG                    Y    ++ V   T 
Sbjct: 18  QGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTE 72

Query: 158 NYGVD--KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPG--PVKGGNTVIAF 210
           +       +   TG  H        + V +  + +K +G  +  E       G N    F
Sbjct: 73  DRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVF 132

Query: 211 IEDPDGYKFEL 221
            EDP+  K E+
Sbjct: 133 CEDPNRIKVEI 143

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 7/32 (21%), Positives = 12/32 (37%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           V + V  L+ SI F++   G        +   
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSR 55

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 74.7 bits (184), Expect = 2e-17
 Identities = 26/126 (20%), Positives = 42/126 (33%), Gaps = 19/126 (15%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
            + H+   V D+    +F  +  G+     R        NAF      D  F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDND-GFILTLMKGK 54

Query: 160 GVDKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
            V          H G   +    V K  + +K  G     EP       T   ++E P G
Sbjct: 55  EVQY----PKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYTF--YVEAPGG 106

Query: 217 YKFELL 222
           +  E++
Sbjct: 107 FTIEVM 112

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 42.8 bits (101), Expect = 9e-06
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNP 263
           + L V D+  +  F E+ FG+     R N 
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA 36

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 74.8 bits (184), Expect = 5e-17
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 13/124 (10%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           + + H+   V DL +++ F+ E LG+ L  + +      T A+L  G  D    +     
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCG--DLWVCLSYDEA 54

Query: 159 YG-VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 217
              V   +       F +A +D     + ++  G  VT        G +   +  DPDG+
Sbjct: 55  RQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGH 110

Query: 218 KFEL 221
           K EL
Sbjct: 111 KLEL 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDN 262
           + L V DL +S+ F+ +  G+ L  + + 
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 74.4 bits (183), Expect = 7e-17
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 14/130 (10%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY--NYG 160
           HV   V DLD + ++YTE L  K L +              +G       I L      G
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGRGDT-----TSFAHGVLPGGLSIVLREHDGGG 62

Query: 161 VDKYDIGT-GFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
            D +D    G  H   +V    D+    E +   G   T      +     I    D D 
Sbjct: 63  TDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT---PTQELPFGWILAFRDADN 119

Query: 217 YKFELLERGP 226
              E +    
Sbjct: 120 IALEAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           V L V DLD S  +Y +    + L +      
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTT 40

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 73.2 bits (179), Expect = 2e-16
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL--GYGPEDSHFVIELTYNYG 160
           HV Y   D D   K+Y E  G   L + + PE+      +       +    +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 161 --------VDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-GNTVIAFI 211
                   + K++   G  H    VDD+      ++ +G ++  +  P  G G   I F+
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFM 130

Query: 212 --EDPDGYKFELLE 223
             +   G   EL +
Sbjct: 131 HPKSGKGVLIELTQ 144

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 72.5 bits (178), Expect = 2e-16
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 6/119 (5%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           H+   V DL++T  F       + +      ++ ++ +   +    +   I +     + 
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLSKEKFF-LIAGLWICIMEGDSLQ 63

Query: 163 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
           +         F I  ++V +  E IKA G ++ +   P   G     +  D D + FEL
Sbjct: 64  E--RTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           + L V DL+++  F +  F  E +    +  +
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTF 39

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 72.2 bits (177), Expect = 5e-16
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 7/125 (5%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R ++ +  V D++R+  FY + LG+K+L         +     G+   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 160 GVDKYDI-GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
             D  +  G           DV    + I     ++         G  V     DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 219 FELLE 223
            E+ E
Sbjct: 122 IEVGE 126

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKVL 268
               +  V D++RS +FY    G+++L   D   + + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKIL--EDFGSFVLF 44

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 71.2 bits (174), Expect = 7e-16
 Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 12/125 (9%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
            +  +      L   + FY   +G +    +     +   A          F +   Y+ 
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN----GVEFSL---YSI 57

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTV-ELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
              +          G  + D+ KTV EL+K  G     +P  +  G    A + DPDG+ 
Sbjct: 58  QNPQRSQIPSL-QLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHS 114

Query: 219 FELLE 223
            EL E
Sbjct: 115 IELCE 119

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 74.7 bits (183), Expect = 1e-15
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 28/184 (15%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY--G 160
           H+     + +    FY   LG++ ++     ++      L YG +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMY-HLFYGDKTGSPGTELSFFEIPL 91

Query: 161 VDKYDIGTG-FGHFGIAVDDVA---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
           V +   GT      G+ V          E  +     V             + F ED +G
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFD--VKHSEMTTYANRPALQF-EDAEG 148

Query: 217 YKFELLERGPTPEPLCQ------------------VMLRVGDLDRSINFYEQAFGMELLR 258
            +  LL          +                  V L V  LD+  +   + FG   + 
Sbjct: 149 LRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVS 208

Query: 259 KRDN 262
           + D 
Sbjct: 209 RNDQ 212

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 70.6 bits (173), Expect = 2e-15
 Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 14/123 (11%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             + H+   V DL  +I FY + LG +L  + D        A+L  G       +     
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELG--SLWLCLSREPQ 54

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
           YG            FGIA  D A+    ++A G  V         G++   +  DPDG++
Sbjct: 55  YGGPA--ADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHR 108

Query: 219 FEL 221
            E 
Sbjct: 109 LEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 40.5 bits (95), Expect = 8e-05
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDN 262
           + L V DL  SI FY    G  L  + D 
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 70.0 bits (171), Expect = 3e-15
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 12/132 (9%)

Query: 96  KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYT---NAFLGYGPEDSHFV 152
           K+   + +V     D+     FY +  G + +     P  +      + +G+   +++ +
Sbjct: 4   KNMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYEL 63

Query: 153 IELTYNYGVDKYDIGTGFGHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIA 209
           ++L         +           VD    V K V +  A G  + + P      +   A
Sbjct: 64  MQLA-----QFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYET-YYHWYQA 117

Query: 210 FIEDPDGYKFEL 221
            + DP+   F +
Sbjct: 118 VLLDPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 40.7 bits (95), Expect = 8e-05
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKVL 268
           V +   D+     FY+Q FG + +    +P ++ L
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGL 46

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 72.6 bits (178), Expect = 4e-15
 Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 39/184 (21%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R  HV  RV D+ + ++ Y E LG+  + + D         +L    E   F + L   
Sbjct: 6   MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLR-- 58

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREP-GPVKGGNTVIAFIEDP 214
               + D   G    G  V   D + +    + A G  V + P G +      + F + P
Sbjct: 59  ----EAD-EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF-QAP 112

Query: 215 DGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAF 252
            G+ FEL                        +G         ++   +L  + + + +  
Sbjct: 113 SGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVL 172

Query: 253 GMEL 256
           G  L
Sbjct: 173 GFYL 176

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 17/129 (13%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI---PEEKYTNAFLGYGPEDSHFVIEL 155
            R  H +    +L  T   +T+ LG  L    +            FL    +        
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYL---AEQVLDENGTRVAQFLSLSTK-------- 197

Query: 156 TYNYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIE 212
            ++     +       H    +   +D+ +  +LI      +   P      +    +  
Sbjct: 198 AHDVAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFF 257

Query: 213 DPDGYKFEL 221
           DP G + E+
Sbjct: 258 DPSGNRNEV 266

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 69.0 bits (168), Expect = 6e-15
 Identities = 22/129 (17%), Positives = 35/129 (27%), Gaps = 11/129 (8%)

Query: 96  KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIEL 155
           ++   + H+     DLD    FY   LG KL R+            +         V  L
Sbjct: 5   RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVCHL 56

Query: 156 TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP---GPVKGGNTVIAFIE 212
           +  +  +       FG             +L K +G     +               F+ 
Sbjct: 57  SDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLI 116

Query: 213 DPDGYKFEL 221
           DP     E 
Sbjct: 117 DPSNNLLEF 125

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 71.6 bits (175), Expect = 1e-14
 Identities = 24/185 (12%), Positives = 54/185 (29%), Gaps = 42/185 (22%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             +            T+ F+T+ LGM +  +         + +L    +   + +++T  
Sbjct: 10  AHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT-- 61

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
                     G GH  +     + + +  + +       T        G T     + PD
Sbjct: 62  -----EAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTF--EYQSPD 114

Query: 216 GYKFELL------------------------ERGPTPEPLCQVMLRVGDLDRSINFYEQA 251
           G+  +LL                         +G   + +  + L   D+    + +E+ 
Sbjct: 115 GHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERH 174

Query: 252 FGMEL 256
            G   
Sbjct: 175 LGFRT 179

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 67.7 bits (165), Expect = 2e-14
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 9/126 (7%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIE-LTY 157
           +++  +   +GDL+ + +FY E  G   + +           +   G   + ++++ L  
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEII-----FYQMNGFVLATWLVQNLQE 58

Query: 158 NYGVDKYDIGTGF--GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
           + GV            H   A  +VA  +E + A GG++ R          +  ++ DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGLRGYVADPD 117

Query: 216 GYKFEL 221
           G+ +E+
Sbjct: 118 GHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           + L +GDL+ S  FY + FG   + +     +
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIF 40

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 69.3 bits (169), Expect = 4e-14
 Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 28/185 (15%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             +  +     +LDR + FYT  LG + + ++           +  G   S        +
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG--VSQIQFRAAAD 76

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA---FIEDPD 215
                Y I        IA +   +    +   G  +T             A   ++EDP 
Sbjct: 77  GTKPFYHIA-----INIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPS 131

Query: 216 GYKFELLERGPTPEP------------LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNP 263
           G   EL+ R                  + ++ +   D++++    +QA     L + +  
Sbjct: 132 GNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIEPA 191

Query: 264 EYKVL 268
               +
Sbjct: 192 GLNFI 196

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 68.8 bits (168), Expect = 1e-13
 Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 33/176 (18%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL-GYGPEDSHFVIELTY 157
             + +V Y V D D    FY +  G++ + +         NA+    G  D H V++L  
Sbjct: 7   TEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQG-ADEHHVVQLR- 58

Query: 158 NYGVDKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIE 212
                + D         +A D    V      ++A G KV  EP  +   GG     F  
Sbjct: 59  -----RAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRF-F 111

Query: 213 DPDGYKFEL------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 256
            PDG  FE+                  P  +  ++L   +    + F+    G ++
Sbjct: 112 SPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 37/185 (20%), Positives = 56/185 (30%), Gaps = 41/185 (22%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL-GYGPEDSHFVIELTY 157
            R  H   RV +L+  I FY   LG+          +     +   +   D    I    
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYI---- 57

Query: 158 NYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREP-GPVKGGNTVIAFIED 213
              + + D   G   FG  V     + K    ++A G   TR P G +      + F E 
Sbjct: 58  ---IREAD-TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-EL 112

Query: 214 PDGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQA 251
           P G+  EL                       E G  P  L   +L   ++      + + 
Sbjct: 113 PSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEV 172

Query: 252 FGMEL 256
            G  L
Sbjct: 173 LGFYL 177

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 65.3 bits (159), Expect = 1e-13
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             + H+V  V D+  T  FY + LGMK +              L +G +  +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINL-HQLGNE 61

Query: 159 YGVDKYDIGTGFGHF-GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA--FIEDPD 215
           +     ++  G      I    ++  ++ ++ +G  +   P    G    I   +  DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 216 GYKFEL 221
           G   E+
Sbjct: 122 GNLIEV 127

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 65.5 bits (159), Expect = 2e-13
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 8/125 (6%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           RR+ H+V  V  +  T  FY++ LGM+++  ++          L +G +  +        
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEF 79

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDG 216
                + +        I    + + ++ +KA    +   P P  G  G  +  +  DPD 
Sbjct: 80  EPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

Query: 217 YKFEL 221
              E+
Sbjct: 140 NLIEV 144

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 6/32 (18%), Positives = 18/32 (56%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           +++ V  +  +  FY +  GME++  +++ + 
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDRKA 62

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 67.4 bits (164), Expect = 4e-13
 Identities = 35/177 (19%), Positives = 55/177 (31%), Gaps = 34/177 (19%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R  +    V DL ++  FY + LG+ +  + +         +L    E  H  + LT  
Sbjct: 16  LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT-- 67

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTR-EPGPVKGGNTVIAFIEDP 214
               K             V   +DV K     +  G +  R + G VKG    +   EDP
Sbjct: 68  ----KGP-VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRV-EDP 121

Query: 215 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 256
            G+ +E                L        L        D+ R   + E   G  +
Sbjct: 122 LGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRV 177

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 15/128 (11%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R+ H      D+ R  K+  E LG ++       E     A++          +     
Sbjct: 151 VRLDHFNQVTPDVPRGRKYL-EDLGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGG-- 207

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--ED 213
                   G    H   +     ++ +  + + A       E GP + G +   ++   D
Sbjct: 208 -------NGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 214 PDGYKFEL 221
           PD ++ E+
Sbjct: 261 PDNHRIEI 268

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 66.9 bits (163), Expect = 4e-13
 Identities = 31/177 (17%), Positives = 52/177 (29%), Gaps = 34/177 (19%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R  ++   V DL ++ +FY + LG+ +  + +         +L    E  H  + L   
Sbjct: 16  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR-- 67

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGP-VKGGNTVIAFIEDP 214
               +         F   V    +V       K  G +  R      KG    +   EDP
Sbjct: 68  ----QGP-IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRV-EDP 121

Query: 215 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGMEL 256
            G+ +E                L        L        D+ R   + E   G  +
Sbjct: 122 LGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRV 177

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 15/128 (11%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R+ H      D+ R   +  E LG ++       +     A++          +     
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGG-- 207

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--ED 213
                   G    H   A     ++ +  + + A       E GP + G +   ++   D
Sbjct: 208 -------NGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 214 PDGYKFEL 221
           PDG++ E+
Sbjct: 261 PDGHRIEI 268

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 65.9 bits (160), Expect = 1e-12
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 23/179 (12%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAF---LGYGPEDSHFVIELTYNY 159
           H+   VG       FY   LG++L+++    ++  T         G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 160 GVDKYDIGT-GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
                  G  G   + +    +A   + ++      T      + G   + F +DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 219 FELLERGPTPEPLCQ---------------VMLRVGDLDRSINFYEQAFGMELLRKRDN 262
            E++ER                          L     D++ +  E   G+E + K  +
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD 185

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 16/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 95  KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIE 154
               +            D+T       +G++ + K                 +  + +  
Sbjct: 148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDL 201

Query: 155 LTYNYGVDKYDIGTGFGHFGIAVDDVA---KTVELIKAKGGKVTREPGPVKGGNTVIAFI 211
                G  +   GT   H     +D          I + G  VT              + 
Sbjct: 202 KLTPIGRGQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT---PVRDRNYFNAIYF 257

Query: 212 EDPDGYKFELLERGP 226
            +     FE+    P
Sbjct: 258 REHGEILFEIATDPP 272

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 65.3 bits (159), Expect = 2e-12
 Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 40/180 (22%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           R + ++ + V D+     F T+ LG+      D               +   + I +   
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRI--DSRAWRIAVQ-- 52

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGP---VKGGNTVIAFIE 212
                          G  V     +A+  + +K  G  VT         +G   +I F  
Sbjct: 53  -----QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITF-A 106

Query: 213 DPDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGM 254
           DP G   E+                         + L   +  V D D+++ FY    G 
Sbjct: 107 DPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGF 166

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 15/129 (11%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKL---LRKRDIPEEKYTNAFLGYGPEDSHFVIEL 155
           + + H V  V D D+ + FYT+ LG +L   +  +  P+      FL       H +   
Sbjct: 141 QGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE-RHHTL--- 196

Query: 156 TYNYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIE 212
                +  + +     HF + V   DDV    + + A  G +T   G     + V  +  
Sbjct: 197 ----AIAAFPLPKRIHHFMLEVASLDDVGFAFDRVDAD-GLITSTLGRHTNDHMVSFYAS 251

Query: 213 DPDGYKFEL 221
            P G + E 
Sbjct: 252 TPSGVEVEY 260

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 60.2 bits (146), Expect = 1e-11
 Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 4/124 (3%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 166
              D DR + +     G +LL ++        +A L  G      ++  T          
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 226
           G       + V DV +      A G  + +       G      + D +G+ +E      
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQ-YLVRDLEGHLWEFTRHLR 124

Query: 227 TPEP 230
              P
Sbjct: 125 DVPP 128

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 59.9 bits (145), Expect = 1e-11
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 8/131 (6%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP----EDSHFVIEL 155
           R+      V D+ ++++FY + LG+++    +     +T A L  G     +    V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEI--PAEADSAPHTEAVLDGGIRLAWDTVETVRSY 60

Query: 156 TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
              +                    V K    +   G +   +P     G    A ++DPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPD 119

Query: 216 GYKFELLERGP 226
           G   +L    P
Sbjct: 120 GNVVDLFAPLP 130

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 59.4 bits (144), Expect = 1e-11
 Identities = 23/116 (19%), Positives = 34/116 (29%), Gaps = 13/116 (11%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 166
              +  R   FY + LGM +                   P ++H  +      G      
Sbjct: 14  ATPEPARAQAFYGDILGMPVAMDHG------WIVTHA-SPLEAHAQVSFAREGGS----- 61

Query: 167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 222
           GT      I VD+  +    I   G  +   P     G     F+ DP G    +L
Sbjct: 62  GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL 116

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 61.9 bits (149), Expect = 3e-11
 Identities = 29/200 (14%), Positives = 53/200 (26%), Gaps = 38/200 (19%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           HV     D       ++  LG  L  + D+      +A L        F+    Y +G D
Sbjct: 34  HVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGAD 93

Query: 163 KYDI-----------------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG-- 203
                                G       + V D         A G +    P  +    
Sbjct: 94  AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF 153

Query: 204 --------GNTVIAFIEDPDGY-------KFELLERGPTPEP----LCQVMLRVGDLDRS 244
                   G+ V+ ++  PDG         FE +      +        ++  V +L  +
Sbjct: 154 RLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAPA 213

Query: 245 INFYEQAFGMELLRKRDNPE 264
             ++    G     +    +
Sbjct: 214 AAYFAGFTGFHEFAEFTTED 233

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 60.0 bits (145), Expect = 9e-11
 Identities = 24/180 (13%), Positives = 50/180 (27%), Gaps = 37/180 (20%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           R + ++     D+    ++  + LGM   +            +L      +  V+     
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP-----EGALYLRMDDFPARLVVV---- 54

Query: 159 YGVDKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPG---PVKGGNTVIAFIE 212
                          G    +   + +    +  +G             +  + +I F  
Sbjct: 55  -----PGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRF-A 108

Query: 213 DPDGYKFEL-------LERGPTPEP---------LCQVMLRVGDLDRSINFYEQAFGMEL 256
           DP G   E+         R  +P           +  V+L   D   +++FY    G  L
Sbjct: 109 DPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRL 168

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 21/137 (15%), Positives = 40/137 (29%), Gaps = 22/137 (16%)

Query: 98  KRRMLHVVYRVGDLDRTIKFYTECLGMKL--------LRKRDIPEEKYTNAFLGYGPEDS 149
           ++ M HVV    D    + FY + LG +L               +               
Sbjct: 140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRH 199

Query: 150 HFVIELTYNYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPG--PVKGG 204
           H +               +G  H  + V   DDV   ++    +   ++   G       
Sbjct: 200 HSL-------AFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVN--D 250

Query: 205 NTVIAFIEDPDGYKFEL 221
             +  +++ P G+  E 
Sbjct: 251 LMLSFYMKTPGGFDIEF 267

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 21/143 (14%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF------- 151
           R  + +   V D++ +++ Y E  G++  +     +    +      P  +         
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL 77

Query: 152 ---VIELTYNYGVD----KY--DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK 202
               +EL           ++    G G  H    V D+ + VE +  KG KV ++ G  +
Sbjct: 78  GPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK-GDFE 136

Query: 203 GGNTVIAFI--EDPDGYKFELLE 223
           GG    A+I          ELLE
Sbjct: 137 GGR--YAYIDTLRALKVMIELLE 157

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 57.7 bits (139), Expect = 5e-10
 Identities = 24/181 (13%), Positives = 54/181 (29%), Gaps = 38/181 (20%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R+ ++ + V D+     F T+ +G+               A      +   + I +   
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRA--DQRAWRIAVQ-- 52

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--ED 213
                        + G+ V     + +  + ++  G   TR    +     V+  +  +D
Sbjct: 53  -----PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQD 107

Query: 214 PDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAFGME 255
           P G   E+                         + +   +  V D  +++ FY +  G  
Sbjct: 108 PFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFV 167

Query: 256 L 256
           L
Sbjct: 168 L 168

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 15/130 (11%)

Query: 98  KRRMLHVVYRVGDLDRTIKFYTECLGMKL---LRKRDIPEEKYTNAFLGYGPEDSHFVIE 154
            + + H V  V D  + + FYTE LG  L   +  +  PE      FL       H +  
Sbjct: 140 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG-RHHTI-- 196

Query: 155 LTYNYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI 211
                 +  + I     HF +     DDV    + + A  G++T   G      T+  + 
Sbjct: 197 -----ALAAFPIPKRIHHFMLQANTIDDVGYAFDRLDAA-GRITSLLGRHTNDQTLSFYA 250

Query: 212 EDPDGYKFEL 221
           + P       
Sbjct: 251 DTPSPMIEVE 260

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 14/126 (11%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-KYTNAFLGYGPEDSHFVIELTYN 158
            +  +   V ++ +        L  K     D   +    +  L      +H V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
            G+             I V+DV +  + +   G KV   P     G      ++ P G  
Sbjct: 63  SGI----------IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLV 111

Query: 219 FELLER 224
            +    
Sbjct: 112 LDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 5/35 (14%), Positives = 12/35 (34%), Gaps = 2/35 (5%)

Query: 231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           L Q+ + V ++ +     E     +      N  +
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKA--DYANDGF 38

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 25/179 (13%), Positives = 53/179 (29%), Gaps = 40/179 (22%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             + ++   V D D    F T+ LG+++L + +         +L    +  H  I +   
Sbjct: 8   IELGYMGISVKDPDAWKSFATDMLGLQVLDEGE-----KDRFYLRM--DYWHHRIVVH-- 58

Query: 159 YGVDKYDIGTGFGHFGIAVDDVA---KTVELIKAKGGKVTR---EPGPVKGGNTVIAFIE 212
                ++      + G  V          + +   G K+          +    ++   E
Sbjct: 59  -----HNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKT-E 112

Query: 213 DPDGYKFEL-------------------LERGPTPEPLCQVMLRVGDLDRSINFYEQAF 252
           DP G   E+                    +     + L   ++R  D+  +  FY    
Sbjct: 113 DPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSLLG 171

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 19/132 (14%)

Query: 98  KRRMLHVVYRVGDLDRTIKFYTECLGMKL---LRKRDIPEEKYTNAFLGYGPEDSHFVIE 154
            + + H + R  D+    KFY+  LG +     R           +F+       H +  
Sbjct: 147 DQGLGHCIVRQTDVAEAHKFYSL-LGFRGDVEYRIPLPNGMTAELSFMHCNA-RDHSI-- 202

Query: 155 LTYNYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPG--PVKGGNTVIA 209
                            H  +     +D+  T +        +  + G         +  
Sbjct: 203 -----AFGAMPAAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHAN--DKALTF 255

Query: 210 FIEDPDGYKFEL 221
           +   P G+  E 
Sbjct: 256 YGATPSGWLIEP 267

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 54.7 bits (131), Expect = 1e-09
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 15/133 (11%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
            V++ V +  ++ +FY   L  + +      E   T A            + L     ++
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPI------ESSPTFAMFVMKTG---LRLGLWAQEEIE 59

Query: 163 -KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
            K     G       V   + V +       K   + + P  +  G T      DPD ++
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 219 FELLERGPTPEPL 231
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 24/181 (13%), Positives = 52/181 (28%), Gaps = 40/181 (22%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
             + ++   V +LD    +    +GM+++   +         +L       H  I L   
Sbjct: 5   TELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE-----DDRIYLRMD--RWHHRIVLH-- 55

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTR---EPGPVKGGNTVIAFIE 212
                 D      + G  V    ++ +  E +K  G             +    ++    
Sbjct: 56  -----ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKL-H 109

Query: 213 DPDGYKFELL-------------------ERGPTPEPLCQVMLRVGDLDRSINFYEQAFG 253
           DP G   E+                    +     + L  +++R  D++ +  FY     
Sbjct: 110 DPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGL 169

Query: 254 M 254
            
Sbjct: 170 E 170

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 17/131 (12%)

Query: 98  KRRMLHVVYRVGDLDRTIKFYTECLGMKL--LRKRDIPEEKYTNAFLGYGPEDSHFVIEL 155
            + + H++ R  D++   +FY           +         T  F+       H +   
Sbjct: 144 GQGLGHIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCND-RHHSL--- 199

Query: 156 TYNYGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPG--PVKGGNTVIAF 210
                     +     H  I     DD+    +L++ +   VT + G         +  +
Sbjct: 200 ----AFGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSN--DEALTFY 253

Query: 211 IEDPDGYKFEL 221
             +P G+ +E 
Sbjct: 254 CANPSGWLWEP 264

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 53.1 bits (127), Expect = 4e-09
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
             +  V +   + +FY   LG+  +         ++   L  G       + L   + V+
Sbjct: 28  FTILYVDNPPASTQFYKALLGVDPVES----SPTFSLFVLANG-----MKLGLWSRHTVE 78

Query: 163 -KYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
            K  +  G G     V++   V +T    KA G  + ++P  ++ G T      DPD ++
Sbjct: 79  PKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTF--TAADPDSHR 136

Query: 219 FEL 221
             +
Sbjct: 137 LRV 139

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 52.6 bits (125), Expect = 3e-08
 Identities = 31/196 (15%), Positives = 57/196 (29%), Gaps = 34/196 (17%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN---- 158
            V + VG+  +   FY   +G + L  R +                  FV+    N    
Sbjct: 14  SVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNK 73

Query: 159 -YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPD 215
             G      G G       V+D    V+  + +G K+ REP   +   G    A ++   
Sbjct: 74  EMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYG 133

Query: 216 GYKFELLERG-----------------PTPEPLCQVMLRV----------GDLDRSINFY 248
                L+E+                  P    L +  L +           ++  +  +Y
Sbjct: 134 DTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWY 193

Query: 249 EQAFGMELLRKRDNPE 264
            +          D+ +
Sbjct: 194 LKNLQFHRFWSVDDTQ 209

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 18/125 (14%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
             +  V +++R+  FY      + +                   +     +   ++ G +
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGD----ALFAIWSGGEE 65

Query: 163 KYDIGTGFGHFGI------AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
                  F   GI       VD +       K+    V +EP     G T    I DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTF--LISDPDG 123

Query: 217 YKFEL 221
           +   +
Sbjct: 124 HIIRV 128

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 1/119 (0%)

Query: 105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 164
           VY   D+D+T+K++ E LG          E       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 165 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 223
                     + ++ +    + +K  G     +      G    + I   DG      E
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRFFE 143

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 47.5 bits (113), Expect = 3e-07
 Identities = 16/121 (13%), Positives = 29/121 (23%), Gaps = 15/121 (12%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 166
            + D+   +  + + LG +L  +          A+L         + E       D    
Sbjct: 14  HIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIPD---- 63

Query: 167 GTGFGHFGIAVDDVAKTVELIKAK----GGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 222
           G       I V D+      +                 +  G      +  PDG      
Sbjct: 64  GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGDWLNFT 122

Query: 223 E 223
            
Sbjct: 123 A 123

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 46.4 bits (110), Expect = 6e-07
 Identities = 24/128 (18%), Positives = 39/128 (30%), Gaps = 20/128 (15%)

Query: 105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 164
                D D T  FY   LG  ++ +            L  G     F       +     
Sbjct: 8   NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHPGL 53

Query: 165 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGG------NTVIAFIEDPDGYK 218
           D    +    + +DD+A+     K+ G + T    P             +A + DPDG  
Sbjct: 54  DPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTL 113

Query: 219 FELLERGP 226
             L++   
Sbjct: 114 LRLIQNEL 121

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 21/137 (15%), Positives = 33/137 (24%), Gaps = 13/137 (9%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTN-------AFLGYGPEDSHFVIEL 155
            ++     +   + FY    G         P+ K          + L      S FV+  
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA--GSSFVVCD 86

Query: 156 TYNYGVDKYDIGTGFG-HFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDP 214
             +          G G  F +   D    V      G                   + DP
Sbjct: 87  VSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDP 145

Query: 215 DGYKFELLERG--PTPE 229
            G  +   E+    T E
Sbjct: 146 FGVTWIFAEKKTVITDE 162

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 43.0 bits (100), Expect = 6e-05
 Identities = 32/212 (15%), Positives = 59/212 (27%), Gaps = 47/212 (22%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+  + 
Sbjct: 28  HIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLS 87

Query: 163 KYDI-----------------------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREP- 198
             +I                       G G     I V+D      +  A G   +  P 
Sbjct: 88  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 147

Query: 199 --------GPVKG-GNTVIAFIE-----------DPDGYKFELLERGPTP---EPLCQVM 235
                     VK  G+ V+ ++             P   + E     P       L   +
Sbjct: 148 VLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAV 207

Query: 236 LRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
             V +L  ++ +     G     +    +   
Sbjct: 208 GNVPELGPALTYVAGFTGFHQFAEFTADDVGT 239

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae} Length = 244

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 10/119 (8%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
               +  +      FY E LGMK L       E+     LG        V+E   +    
Sbjct: 13  IPTLKANNRKLNETFYIETLGMKALL------EESAFLSLGDQTGLEKLVLEEAPSMRTR 66

Query: 163 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
           K +         + V++    +E I +K   + R     KG N     I  P+     +
Sbjct: 67  KVEGRKKLARLIVKVEN-PLEIEGILSKTDSIHR---LYKGQNGYAFEIFSPEDDLILI 121

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 18/121 (14%), Positives = 30/121 (24%), Gaps = 24/121 (19%)

Query: 105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY 164
           V    D+   + F+ + LG +     D  +  +  A +  G    H           +  
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEK----DFGDRDF--AGVRRGDIRLHI-------SRTEHQ 56

Query: 165 DIGTGFGHFGIAVDDV--------AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
            +      + I V D                    G      G    G      + DP G
Sbjct: 57  IVADNTSAW-IEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREF--AVRDPAG 113

Query: 217 Y 217
            
Sbjct: 114 N 114

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 16/126 (12%), Positives = 31/126 (24%), Gaps = 20/126 (15%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 166
              D+   ++F+T+ LG   +   D         F G   +D    I    +       +
Sbjct: 12  TARDVAEAVEFWTDRLGFSRVFVED--------DFAGVVRDDVTLFISAVQD------QV 57

Query: 167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV------IAFIEDPDGYKFE 220
                   + V  + +             R+         V         + DP G    
Sbjct: 58  VPDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVH 117

Query: 221 LLERGP 226
            +    
Sbjct: 118 FVAEEQ 123

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 40.6 bits (94), Expect = 4e-04
 Identities = 32/196 (16%), Positives = 56/196 (28%), Gaps = 34/196 (17%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
            VV+ VG+  +   +Y+   GM+L+            A        + FV+         
Sbjct: 25  AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATP 84

Query: 163 KYDI--------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREP--GPVKGGNTVIAFIE 212
                       G G     I V D           G +   EP     + G  V+A I 
Sbjct: 85  WGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIA 144

Query: 213 DPDGYKFELLERG--------------PTPEPLCQVMLRV----------GDLDRSINFY 248
                +  L++R               P  EP      +           G ++  + FY
Sbjct: 145 TYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFY 204

Query: 249 EQAFGMELLRKRDNPE 264
            +  G   +++    +
Sbjct: 205 NKVMGFTNMKEFVGDD 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	268
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.93
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.9
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.88
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.88
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.88
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.88
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.88
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.87
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.87
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.87
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.87
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.86
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.86
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.85
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.84
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.84
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.84
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.84
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.83
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.83
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.83
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.82
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.82
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.81
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.81
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.81
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.81
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.81
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.8
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.8
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.79
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.79
3ghj_A	141	Putative integron gene cassette protein; integron	99.78
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.78
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.78
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.77
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.77
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.77
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.76
2i7r_A	118	Conserved domain protein; structural genomics cons	99.76
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.76
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.76
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.76
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.75
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.75
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.75
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.75
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.75
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.75
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.73
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.73
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.73
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.73
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.72
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.72
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.72
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.72
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.71
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.71
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.71
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.7
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.7
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.7
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.69
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.68
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.68
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.68
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.67
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.67
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.67
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.64
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.64
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.64
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.62
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.6
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.6
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.59
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.58
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.58
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.57
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.52
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.51
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.51
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.47
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.46
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.46
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.32
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.3
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.27
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.24
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.19
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.18
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.13
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.12
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.59
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.37
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	97.89
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	97.74
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.62
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	97.52
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	97.45
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	97.42
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	97.37
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	97.33
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	97.32
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	97.27
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	97.26
3ghj_A	141	Putative integron gene cassette protein; integron	97.25
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	97.22
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	97.18
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.11
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	97.06
2p25_A	126	Glyoxalase family protein; structural genomics, MC	97.05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	97.01
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	97.0
3huh_A	152	Virulence protein STM3117; structural genomics, ny	96.97
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	96.96
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	96.93
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	96.91
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	96.89
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	96.88
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	96.82
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	96.78
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	96.76
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	96.76
2i7r_A	118	Conserved domain protein; structural genomics cons	96.7
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	96.66
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	96.56
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	96.39
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	96.36
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	96.35
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	96.25
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	96.22
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	96.15
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	96.13
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	95.95
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	95.89
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	95.82
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	95.75
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	95.65
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	95.5
1nki_A	135	Probable fosfomycin resistance protein; potassium	95.36
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	95.03
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	94.88
1xy7_A	166	Unknown protein; structural genomics, protein stru	94.82
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	94.77
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	94.2
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	93.86
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	91.01
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	89.98
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	89.57
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	87.35
3l20_A	172	Putative uncharacterized protein; hypothetical pro	86.76
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	86.58
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	86.35
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	86.32
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	84.55
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	84.22
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	84.17

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.93  E-value=1.6e-24  Score=196.27  Aligned_cols=156  Identities=37%  Similarity=0.688  Sum_probs=129.4

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC-----------CCceeEEEEeeCCCCceEEEEEeeccCCCCCCC
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-----------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI  166 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~  166 (268)
                      +++|+||+|.|+|++++++||+++|||++..+....           ++.+..+++.+++......+++........+..
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~  104 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKL  104 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCB
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCcccc
Confidence            469999999999999999999999999998766544           345667788887665567788887655555566


Q ss_pred             CCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC-CCCCceeEEEEcCCHHHHH
Q 024414          167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRSI  245 (268)
Q Consensus       167 g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~-~~~~l~~v~L~v~d~~~s~  245 (268)
                      +.|+.|++|.|+|+   +++++++|+++...+    .   ..+|++|||||.|||++... .+.+++|+.|.|.|++++.
T Consensus       105 ~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~---~~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl~~a~  174 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNARKLEWPLTEVA----E---GVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSL  174 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHHHHHTCCCEEEE----T---TEEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCHHHHH
T ss_pred             CCCeeEEEEECchH---HHHHHHcCCceeccC----C---ceEEEECCCCCEEEEEecCCCCCCceeEEEEECCCHHHHH
Confidence            77999999999987   678889999887543    2   26889999999999999864 5678999999999999999


Q ss_pred             HHHHHhcCCeEeeeecCC
Q 024414          246 NFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       246 ~FY~~vlG~~~~~~~~~p  263 (268)
                      +||+++|||++..+.+.+
T Consensus       175 ~FY~~vLG~~~~~~~~~~  192 (330)
T 3zi1_A          175 NYWCNLLGMKIYENDEEK  192 (330)
T ss_dssp             HHHHHTTCCEEEEEETTT
T ss_pred             HHHHHhcCCEEEeeccCC
Confidence            999999999998876554

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.90  E-value=3.3e-22  Score=181.46  Aligned_cols=160  Identities=17%  Similarity=0.186  Sum_probs=120.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC-CCceeEEEEeeCCCCceEEEEEeeccCCCCC-CCCCCeeEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-DIGTGFGHFG  174 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-~~g~g~~hi~  174 (268)
                      ++.+|+||+|.|+|++++++||+++|||++..+..+. +.+....++....+.....+++......... ....++.|++
T Consensus         5 ~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hia   84 (335)
T 3oaj_A            5 KTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTS   84 (335)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEE
Confidence            5789999999999999999999999999998775332 1222233443332221234565543222211 2234688999


Q ss_pred             EEEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---------------CCCceeEEEE
Q 024414          175 IAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVMLR  237 (268)
Q Consensus       175 f~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---------------~~~l~~v~L~  237 (268)
                      |.|+  |+++++++|+++|+++..  .+  .++.+.+||+|||||.|||++..+.               ..+++|+.|.
T Consensus        85 f~V~~~dl~~~~~rL~~~Gv~~~~--~~--~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L~  160 (335)
T 3oaj_A           85 YVVPKGAMAFWEKRLEKFNVPYTK--IE--RFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATLL  160 (335)
T ss_dssp             EEECTTCHHHHHHHHHHTTCCCEE--EE--ETTEEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEEE
T ss_pred             EEecHHHHHHHHHHHHhCcceeee--ec--cCCcEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEEE
Confidence            9999  999999999999998864  22  2346889999999999999997642               1358999999


Q ss_pred             cCCHHHHHHHHHHhcCCeEeeee
Q 024414          238 VGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      |.|++++.+||+++|||++..+.
T Consensus       161 v~Dle~t~~FY~~vLG~~~~~~~  183 (335)
T 3oaj_A          161 SEQPDKTADLLENIMGLERVGKE  183 (335)
T ss_dssp             CSSHHHHHHHHHHTSCCEEEEEE
T ss_pred             ECCHHHHHHHHHHHhCCEEeecc
Confidence            99999999999999999988653

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.88  E-value=1.8e-21  Score=176.14  Aligned_cols=161  Identities=16%  Similarity=0.183  Sum_probs=117.7

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-CceeEEEEeeCCCCceEEEEEeeccCCCC-CCCCCCeeEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-EKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFG  174 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~  174 (268)
                      ++.+|+||.|.|+|++++++||+++|||++.......+ ......++..+.+.....+.+........ .....+..|++
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hia  106 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG  106 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEE
Confidence            36789999999999999999999999999886542111 11122233322212234555544222111 12234788999


Q ss_pred             EEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC------------------CCCcee
Q 024414          175 IAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQ  233 (268)
Q Consensus       175 f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~------------------~~~l~~  233 (268)
                      |.|+   |+++++++|+++|+++..++.  .+| .+.+||+|||||.|||++....                  ..+++|
T Consensus       107 f~v~~~~dld~~~~~l~~~G~~~~~~~~--~~G-~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~h  183 (338)
T 1zsw_A          107 LLVPSEDSLHYWKERFEKFDVKHSEMTT--YAN-RPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGS  183 (338)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEE--ETT-EEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHCCCccccccc--cCC-cEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEE
Confidence            9998   699999999999999876544  244 4889999999999999997631                  135789


Q ss_pred             EEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          234 VMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       234 v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      +.|.|.|++++.+||+++|||++....
T Consensus       184 v~l~v~Dl~~a~~FY~~~LG~~~~~~~  210 (338)
T 1zsw_A          184 VELTVRRLDKMASTLTEIFGYTEVSRN  210 (338)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEeec
Confidence            999999999999999999999987653

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.88  E-value=2.1e-21  Score=151.04  Aligned_cols=130  Identities=61%  Similarity=1.070  Sum_probs=100.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      ++|+||.|.|+|++++++||+++|||++......+++.+..+++..++......+++...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            37899999999999999999999999998765544445566777766532234566665433333344568889999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          179 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       179 Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      |+++++++|+++|+++..++...++|..+.++++|||||.|||++..+..
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~~  130 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  130 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC----
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCCC
Confidence            99999999999999998877777766557899999999999999987643

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.88  E-value=1.8e-21  Score=173.54  Aligned_cols=153  Identities=23%  Similarity=0.275  Sum_probs=117.6

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEee-CCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGY-GPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      +.+|+||.|.|+|++++++||+++|||++...... .    .+++.. +... ...+.+...       ...++.|++|.
T Consensus         6 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-~----~~~l~~~~~~~-~~~l~l~~~-------~~~~~~h~a~~   72 (309)
T 3hpy_A            6 VLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-G----RVYFKCWDERD-HSCYIIREA-------DTAGIDFFGFK   72 (309)
T ss_dssp             EEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-S----CEEEECTTCCB-SCSEEEEEC-------SSCEEEEEEEE
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-C----eEEEEeccCCC-ceEEEEEeC-------CCCceeEEEEE
Confidence            57999999999999999999999999999876421 1    245543 3322 123444332       12478899999


Q ss_pred             ECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC----------------------CCCc
Q 024414          177 VDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------------------PEPL  231 (268)
Q Consensus       177 V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~----------------------~~~l  231 (268)
                      |+|   +++++++|+++|+++...+.....+..+.+||+|||||.|||++....                      +..+
T Consensus        73 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i  152 (309)
T 3hpy_A           73 VLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQL  152 (309)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEE
T ss_pred             ECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCccccee
Confidence            997   999999999999998766543223445789999999999999975421                      2358


Q ss_pred             eeEEEEcCCHHHHHHHHHHhcCCeEeeeecCC
Q 024414          232 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       232 ~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p  263 (268)
                      +|+.|.|.|++++.+||+++|||++......+
T Consensus       153 ~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~  184 (309)
T 3hpy_A          153 DHCLLYGPNIAEVQKIFTEVLGFYLVERVLSP  184 (309)
T ss_dssp             EEEEEEESCHHHHHHHHHHTSCCEEEEEEECS
T ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEEecC
Confidence            99999999999999999999999987776544

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.88  E-value=1.3e-21  Score=173.13  Aligned_cols=154  Identities=21%  Similarity=0.181  Sum_probs=112.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC-ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      .+.|+.|.|+|++++++||+++|||++......... .+  ..+..+..   ....+....... .....+.++++|.|+
T Consensus        32 ~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~--~~~~~~g~---~~~~l~~~~~~~-~~~~~~~~~~~~~v~  105 (282)
T 3oxh_A           32 TPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVY--SMATLNGE---AVAAIAPMPPGA-PEGMPPIWNTYIAVD  105 (282)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCE--EEEEETTE---EEEEEEECCSCC----CCCEEEEEEECS
T ss_pred             CcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCE--EEEEeCCe---eeEeeccCCCCC-CCCCCCcEEEEEEeC
Confidence            345555999999999999999999998765432110 23  22333221   122233221111 112345678999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC--------CCCCceeEEEEcCCHHHHHHHHHH
Q 024414          179 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------TPEPLCQVMLRVGDLDRSINFYEQ  250 (268)
Q Consensus       179 Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~--------~~~~l~~v~L~v~d~~~s~~FY~~  250 (268)
                      |+++++++++++|+++..++.+.++ .++.++|+||+||.|+|++...        .+..++|+.|.|.|++++.+||++
T Consensus       106 d~d~~~~~l~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY~~  184 (282)
T 3oxh_A          106 DVDAVVDKVVPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYEA  184 (282)
T ss_dssp             CHHHHHTTTTTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHHHH
Confidence            9999999999999999888777654 3588999999999999999874        246799999999999999999999


Q ss_pred             hcCCeEeeee
Q 024414          251 AFGMELLRKR  260 (268)
Q Consensus       251 vlG~~~~~~~  260 (268)
                      +|||++....
T Consensus       185 vlG~~~~~~~  194 (282)
T 3oxh_A          185 VVGLTHSSME  194 (282)
T ss_dssp             HHCCEEEEC-
T ss_pred             HhCCeeeecc
Confidence            9999987643

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.88  E-value=1.8e-21  Score=173.11  Aligned_cols=152  Identities=20%  Similarity=0.286  Sum_probs=116.0

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+|+||.|.|+|++++++||+++|||++......  +   .+++..+.....+.+.+...       ...+..|++|.
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f~   71 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFK   71 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--C---cEEEEecCCCCceEEEEccC-------CCCCcceEEEE
Confidence            467999999999999999999999999999875431  1   25565543322233333221       12478899999


Q ss_pred             E---CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC----------------------CCCCc
Q 024414          177 V---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEPL  231 (268)
Q Consensus       177 V---~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~----------------------~~~~l  231 (268)
                      |   +|+++++++|+++|+++..++.....+..+.++|+|||||.|||+++..                      ...++
T Consensus        72 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  151 (307)
T 1mpy_A           72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRF  151 (307)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEE
T ss_pred             eCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCce
Confidence            9   7899999999999999877664222223477899999999999998532                      12347


Q ss_pred             eeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          232 CQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       232 ~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      +|+.|.|.|++++.+||+++|||++....
T Consensus       152 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~  180 (307)
T 1mpy_A          152 DHALMYGDELPATYDLFTKVLGFYLAEQV  180 (307)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             eeEEEEcCCHHHHHHHHHHHcCCeeEeee
Confidence            89999999999999999999999987654

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.87  E-value=3.2e-21  Score=170.33  Aligned_cols=147  Identities=16%  Similarity=0.225  Sum_probs=114.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||++.....  .    .+++..+....  .+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~--~l~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQRAW--RIAVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSC--SEEEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C----eEEEEcCCceE--EEEEccC-------CCCCccEEEEEE
Confidence            5789999999999999999999999999987542  1    24555544322  2333321       124678999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEeCCC------------------CCCceeE
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  234 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~~~~------------------~~~l~~v  234 (268)
                      +   |+++++++|+++|+++..++...  ..+..+.++|+|||||.|||++....                  ...++|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHF  146 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccceE
Confidence            8   89999999999999987766531  11235789999999999999986521                  1357999


Q ss_pred             EEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          235 MLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       235 ~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .|.|.|++++.+||+++|||++...
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~  171 (292)
T 1kw3_B          147 VRCVPDTAKAMAFYTEVLGFVLSDI  171 (292)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEecCCHHHHHHHHHhccCCEEeee
Confidence            9999999999999999999998754

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.87  E-value=5.4e-21  Score=173.39  Aligned_cols=150  Identities=15%  Similarity=0.218  Sum_probs=116.5

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+|+||.|.|+|++++++||+++|||++....+      ..+++..........+.+....       ..++.|++|.
T Consensus         8 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-------~~g~~~~af~   74 (339)
T 3lm4_A            8 DIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-------EAGMGHAAMR   74 (339)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-------CCCcceEEEE
Confidence            47799999999999999999999999999987633      1345544222112234443321       3478899999


Q ss_pred             ECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC------------------------CCC
Q 024414          177 VDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------------------------TPE  229 (268)
Q Consensus       177 V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~------------------------~~~  229 (268)
                      |+|   +++++++|+++|+++...+..  .+..+.++|+|||||.|||+....                        .+.
T Consensus        75 v~~~~dld~~~~~l~~~G~~~~~~~~~--~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  152 (339)
T 3lm4_A           75 TSSPEALERRAKSLTDGNVDGTWSEDQ--FGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVK  152 (339)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEECCS--TTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCC
T ss_pred             eCCHHHHHHHHHHHHHCCCceeeccCC--CCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcc
Confidence            997   999999999999998766552  234578999999999999986521                        234


Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeeeec
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~  261 (268)
                      +++|+.|.|.|++++.+||+++|||++.....
T Consensus       153 ~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~  184 (339)
T 3lm4_A          153 RIDHLNLMSSDVTAVKDSFERHLGFRTTERVV  184 (339)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE
T ss_pred             eeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe
Confidence            68999999999999999999999999877643

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.87  E-value=3.5e-21  Score=170.54  Aligned_cols=147  Identities=20%  Similarity=0.288  Sum_probs=114.8

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||++....+  .    .+++..+...  +.+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~--~~l~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSRA--WRIAVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCCc--EEEEEecC-------CCCCccEEEEEe
Confidence            4689999999999999999999999999987542  1    3455554332  22333321       134788999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEeCCC------------------CCCceeE
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  234 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~~~~------------------~~~l~~v  234 (268)
                      +   |+++++++|+++|+++...+...  ..+..+.++|.|||||.|||++....                  +..++|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHF  146 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccceE
Confidence            9   89999999999999987665432  11335789999999999999986521                  1368999


Q ss_pred             EEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          235 MLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       235 ~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .|.|.|++++.+||+++|||++...
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~  171 (297)
T 1lgt_A          147 VRCVPDSDKALAFYTDVLGFQLSDV  171 (297)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEecCCHHHHHHHHHHhcCCeeeeE
Confidence            9999999999999999999998654

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.87  E-value=5.4e-21  Score=171.98  Aligned_cols=152  Identities=20%  Similarity=0.259  Sum_probs=117.5

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+|+||.|.|+|++++++||+++|||++....+      ..+++...+......+.+...       ...++.|++|.
T Consensus        14 ~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~f~   80 (323)
T 1f1u_A           14 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYR   80 (323)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEEC-------CCCCeeEEEEE
Confidence            47799999999999999999999999999876532      135565433221223444432       12478899999


Q ss_pred             E---CCHHHHHHHHHHcCCeEeeCCc-ccCCCCeEEEEEECCCCCEEEEEEeCCC---------------CCCceeEEEE
Q 024414          177 V---DDVAKTVELIKAKGGKVTREPG-PVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVMLR  237 (268)
Q Consensus       177 V---~Did~~~~~L~~~G~~i~~~p~-~~~~G~~~~~~~~DPdG~~iEl~e~~~~---------------~~~l~~v~L~  237 (268)
                      |   +|+++++++|+++|+++..++. ..++ .++.++|.||+||.|||++....               +.+++|+.|.
T Consensus        81 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~-~g~~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~l~  159 (323)
T 1f1u_A           81 VKSPAEVDAAEAYYKELGCRTERRKEGFTKG-IGDSVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQV  159 (323)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTT-BCSEEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHhCCCcEEeccccccCC-cceEEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeEEEe
Confidence            9   6899999999999999877665 3333 34678999999999999976432               2458999999


Q ss_pred             cCCHHHHHHHHHHhcCCeEeeeecCC
Q 024414          238 VGDLDRSINFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~~~~~p  263 (268)
                      |.|++++.+|| ++|||++......+
T Consensus       160 v~D~~~a~~FY-~~LGf~~~~~~~~~  184 (323)
T 1f1u_A          160 TPDVPRGRAYL-EDLGFRVSEDIKDS  184 (323)
T ss_dssp             ESCHHHHHHHH-HHTTCEEEEEEECT
T ss_pred             cCCHHHHHHHH-HhCCCeEEEEEEcC
Confidence            99999999999 99999988765544

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.86  E-value=3.3e-21  Score=170.96  Aligned_cols=147  Identities=13%  Similarity=0.156  Sum_probs=113.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEE-EecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLR-KRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      +.+|+||.|.|+|++++++||+++|||++.. ...   .   .+++..+...  +.+.+...       ...++.|++|.
T Consensus         3 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~---~~~~~~~~~~--~~l~l~~~-------~~~~~~~~~~~   67 (300)
T 2zyq_A            3 IRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE---G---ALYLRMDDFP--ARLVVVPG-------EHDRLLEAGWE   67 (300)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS---S---CEEEESSSSS--CSEEEEEC-------SSCEEEEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC---C---eEEEEeCCCc--EEEEEecC-------CCCCcceEEEE
Confidence            5789999999999999999999999999875 321   1   2455554332  23444332       13578899999


Q ss_pred             ECC---HHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEe-CC---------------CCCCceeEE
Q 024414          177 VDD---VAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GP---------------TPEPLCQVM  235 (268)
Q Consensus       177 V~D---id~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~-~~---------------~~~~l~~v~  235 (268)
                      |+|   +++++++|+++|+++..++...  ..+..+.++|+|||||.|||++. ..               .+.+++|+.
T Consensus        68 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~hv~  147 (300)
T 2zyq_A           68 CANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVV  147 (300)
T ss_dssp             CSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSCEEE
T ss_pred             eCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccCeEE
Confidence            975   8899999999999987665532  11235789999999999999997 21               124689999


Q ss_pred             EEcCCHHHHHHHHHHhcCCeEeee
Q 024414          236 LRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       236 L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      |.|.|++++.+||+++|||++...
T Consensus       148 l~v~D~~~a~~FY~~~LG~~~~~~  171 (300)
T 2zyq_A          148 LSTRDDAEALHFYRDVLGFRLRDS  171 (300)
T ss_dssp             EECSCHHHHHHHHHTTTCCEEEEE
T ss_pred             EEeCCHHHHHHHHHHhcCCEEeee
Confidence            999999999999999999998654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.86  E-value=1.4e-20  Score=168.47  Aligned_cols=150  Identities=22%  Similarity=0.342  Sum_probs=117.2

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+|.||.|.|+|++++++||+++|||++....+      ..+++..+.......+.+....       ..++.|++|.
T Consensus         5 ~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-------~~~~~~~~~~   71 (310)
T 3b59_A            5 RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-------ENRIDVIALA   71 (310)
T ss_dssp             CEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-------SCEEEEEEEE
T ss_pred             ecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-------CCCeeEEEEE
Confidence            46799999999999999999999999999876532      1355555431011234444321       3577899999


Q ss_pred             E---CCHHHHHHHHHHcCCeEeeCCcc--cCCCCeEEEEEECCCCCEEEEEEeCC------------CCCCceeEEEEcC
Q 024414          177 V---DDVAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGP------------TPEPLCQVMLRVG  239 (268)
Q Consensus       177 V---~Did~~~~~L~~~G~~i~~~p~~--~~~G~~~~~~~~DPdG~~iEl~e~~~------------~~~~l~~v~L~v~  239 (268)
                      |   +|+++++++|+++|+++..++..  .++ +.+.+++.||+||.|||++...            .+.+++|+.|.|.
T Consensus        72 v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v~  150 (310)
T 3b59_A           72 ADSRSDVDALRASVEAAGCKVASEPAVLATPG-GGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSP  150 (310)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBCCCSEECCSTT-CCEEEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEET
T ss_pred             eCCHHHHHHHHHHHHhCCCeEeecCccccccC-CceEEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEecC
Confidence            9   68999999999999998877654  333 3578899999999999998753            1346899999999


Q ss_pred             CHHHHHHHHHHhcCCeEeeee
Q 024414          240 DLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       240 d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      |++++.+||+++|||++....
T Consensus       151 D~~~a~~FY~~~LG~~~~~~~  171 (310)
T 3b59_A          151 NHQDMVKFFTDVLGFKVSDWL  171 (310)
T ss_dssp             THHHHHHHHHHTSCCEEEEEE
T ss_pred             CHHHHHHHHHhCCCCEEEEee
Confidence            999999999999999987653

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.86  E-value=2.3e-20  Score=171.31  Aligned_cols=155  Identities=20%  Similarity=0.241  Sum_probs=121.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      .+.+|+||.|.|+|++++++||+++|||++..+.+      ..++++..+......+.+....       ..++.|++|.
T Consensus        14 ~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-------~~gl~~~a~~   80 (365)
T 4ghg_A           14 DILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-------VAALKAMAFR   80 (365)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-------CCCcceEEEE
Confidence            47899999999999999999999999999987643      2466766544333345544321       2478999999


Q ss_pred             ECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC---------------CCCCceeEEEEc
Q 024414          177 VDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRV  238 (268)
Q Consensus       177 V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~---------------~~~~l~~v~L~v  238 (268)
                      |.+   ++++.++|+++|+.+...+.....+..+.++|.|||||.|||+....               .+.+++|++|.+
T Consensus        81 v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~v  160 (365)
T 4ghg_A           81 VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVT  160 (365)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEee
Confidence            975   88999999999999876554443444578999999999999996442               134689999999


Q ss_pred             CCHHHHHHHHHHhcCCeEeeeecCCCC
Q 024414          239 GDLDRSINFYEQAFGMELLRKRDNPEY  265 (268)
Q Consensus       239 ~d~~~s~~FY~~vlG~~~~~~~~~p~~  265 (268)
                      .|++++.+||++ |||++++....++.
T Consensus       161 ~D~~~t~~Fy~~-LGf~~sd~~~~~~g  186 (365)
T 4ghg_A          161 PDVPRGRKYLED-LGFRVTEDIQDDEG  186 (365)
T ss_dssp             SCHHHHHHHHHH-TTCEEEEEEECTTS
T ss_pred             cCHHHHHHHHHh-cCCEEEEEEecCCC
Confidence            999999999976 99999877666543

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.86  E-value=2.4e-21  Score=156.06  Aligned_cols=129  Identities=20%  Similarity=0.174  Sum_probs=91.8

Q ss_pred             hhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC-----CCCCC
Q 024414           94 VKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-----YDIGT  168 (268)
Q Consensus        94 ~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-----~~~g~  168 (268)
                      ++...++|+|+.|.|+|+++|++||+++|||++....+.++  .+...+..........+.+........     ...+.
T Consensus        20 ~~~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   97 (155)
T 4g6x_A           20 FQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVAD   97 (155)
T ss_dssp             ---CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHT
T ss_pred             eccCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccC
Confidence            45667799999999999999999999999999876654433  223333333332223333322111111     01245


Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |..|++|.|+|+++++++|+++|+++..+|.+.++|  +.++|+|||||.|||+|...
T Consensus        98 g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g--~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSC--EEEEEECSSSCEEEEEEC--
T ss_pred             CceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCe--EEEEEECCCCCEEEEEEECC
Confidence            778999999999999999999999999888887765  77999999999999999653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.85  E-value=9.1e-21  Score=168.72  Aligned_cols=147  Identities=16%  Similarity=0.242  Sum_probs=114.1

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||++.....  +   ...++..+....  .+.+....       ..++.|++|.|
T Consensus         4 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~--~l~l~~~~-------~~~~~~~~f~v   69 (305)
T 2wl9_A            4 VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHH--RIVLHADG-------SDDLAYIGWRV   69 (305)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSC--SEEEECSS-------CCEEEEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeE--EEEEEECC-------CCCeEEEEEEE
Confidence            5789999999999999999999999999875211  1   134555554322  34444321       35788999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEe-CC------------------CCCCcee
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GP------------------TPEPLCQ  233 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~-~~------------------~~~~l~~  233 (268)
                      +   |+++++++|+++|+++..++...  ..+..+.++++|||||.|||++. ..                  ...+++|
T Consensus        70 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~h  149 (305)
T 2wl9_A           70 AGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGH  149 (305)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCceeee
Confidence            7   69999999999999988766543  23456889999999999999987 21                  1136899


Q ss_pred             EEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          234 VMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       234 v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      +.|.|.|++++.+|| ++|||++...
T Consensus       150 v~l~v~D~~~s~~FY-~vLG~~~~~~  174 (305)
T 2wl9_A          150 IIIREDDVEEATRFY-RLLGLEGAVE  174 (305)
T ss_dssp             EEECCSCHHHHHHHH-HHHTCEEEEC
T ss_pred             EEEECCCHHHHHHHH-HHcCCeeeee
Confidence            999999999999999 9999998654

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.84  E-value=2.8e-20  Score=143.66  Aligned_cols=125  Identities=26%  Similarity=0.365  Sum_probs=93.8

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCC-------CCCC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-------DIGT  168 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-------~~g~  168 (268)
                      +|+.+|+||+|.|+|++++++||+++|||++......++.+...+++..++    ..+++.........       ..+.
T Consensus         1 sm~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3rmu_A            1 SMLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGN----TKMELLHPLGLDSPIAGFLQKNKAG   76 (134)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSS----SEEEEEEECSTTCTTHHHHHHCTTC
T ss_pred             CccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCC----EEEEEEecCCCCchhhhhhhccCCC
Confidence            478899999999999999999999999999886654444455667777653    24555543222111       2356


Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEE--ECCCCCEEEEEEe
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLER  224 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~--~DPdG~~iEl~e~  224 (268)
                      |+.|++|.|+|+++++++|+++|+++..++.....++.+.+++  +|||||.|||+|.
T Consensus        77 g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           77 GMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             CceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            8899999999999999999999999876644433334456666  8999999999973

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.84  E-value=7.3e-20  Score=141.73  Aligned_cols=125  Identities=16%  Similarity=0.247  Sum_probs=95.1

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      .|+.+|+||.|.|+|++++++||+++|||++......+++ ...+.+..+.  ....+.+.............+..|++|
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~   85 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISL   85 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEE
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEE
Confidence            3578999999999999999999999999999876542221 2233343332  234566665432112223457789999


Q ss_pred             EECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          176 AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       176 ~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      .|+|+++++++|+++|+++..++...++|. +.++++|||||.|||+|.
T Consensus        86 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           86 ITRDIDEAYKTLTERGVTFTKPPEMMPWGQ-RATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EESCHHHHHHHHHHTTCEESSSCEECTTSC-EEEEEECTTCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHCCCEeecCCCcCCCCC-EEEEEECCCCCEEEEEeC
Confidence            999999999999999999988888887764 889999999999999974

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.84  E-value=4.7e-20  Score=164.04  Aligned_cols=147  Identities=18%  Similarity=0.151  Sum_probs=112.2

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||++.....  .   ...++..+.....  +.+...       ...++.|++|.|
T Consensus         7 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~--l~l~~~-------~~~~~~~~~~~v   72 (302)
T 2ehz_A            7 VIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHR--IVVHHN-------GQDDLEYLGWRV   72 (302)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCS--EEEESS-------CCSEEEEEEEEE
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceE--EEEecC-------CCCCeeEEEEEE
Confidence            5789999999999999999999999999875421  1   1345554432222  344321       124678999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCcccC--CCCeEEEEEECCCCCEEEEEEeCC----C--------C-------CCcee
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERGP----T--------P-------EPLCQ  233 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~~--~G~~~~~~~~DPdG~~iEl~e~~~----~--------~-------~~l~~  233 (268)
                      +   |+++++++|+++|+++..++...+  .+..+.++|+|||||.|||++..+    .        +       .+++|
T Consensus        73 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  152 (302)
T 2ehz_A           73 AGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGH  152 (302)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCccce
Confidence            5   699999999999999877665432  134688999999999999997632    1        1       17899


Q ss_pred             EEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          234 VMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       234 v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      +.|.|.|++++.+|| ++|||++...
T Consensus       153 v~l~v~D~~~a~~FY-~~lG~~~~~~  177 (302)
T 2ehz_A          153 CIVRQTDVAEAHKFY-SLLGFRGDVE  177 (302)
T ss_dssp             EEECCSCHHHHHHHH-HHTTCBCCEE
T ss_pred             EEEEcCCHHHHHHHH-HhcCCeeeeE
Confidence            999999999999999 9999997643

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.84  E-value=7.4e-20  Score=159.81  Aligned_cols=148  Identities=16%  Similarity=0.253  Sum_probs=113.8

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      .++.+|+||.|.|+|++++++||+++|||++..+..      ..+++..++    ..+.+.....     .+.+..|++|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~~-----~~~~~~hiaf   86 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAAD-----GTKPFYHIAI   86 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECCT-----TCCCCCEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECCC-----CCCCeeEEEE
Confidence            457899999999999999999999999999876643      136666653    3455544221     1346789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEeeC-Ccc---cCCCCeEEEEEECCCCCEEEEEEeCCC------------CCCceeEEEE
Q 024414          176 AVD--DVAKTVELIKAKGGKVTRE-PGP---VKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVMLR  237 (268)
Q Consensus       176 ~V~--Did~~~~~L~~~G~~i~~~-p~~---~~~G~~~~~~~~DPdG~~iEl~e~~~~------------~~~l~~v~L~  237 (268)
                      .|+  ++++++++|+++ +++..+ +.+   ...++.+.+||+|||||.|||+++...            +.+++||.|.
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L~  165 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINIT  165 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEEE
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEEE
Confidence            986  599999999999 887652 222   123457899999999999999997642            2368999999


Q ss_pred             cCCHHHHHHHHHHhcCCeEeeee
Q 024414          238 VGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      |.|++++.+|| ++|||+...++
T Consensus       166 v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          166 TSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             CSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             eCCHHHHHHHH-HHcCCCcccCC
Confidence            99999999999 99999987663

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.84  E-value=1.1e-19  Score=140.38  Aligned_cols=122  Identities=26%  Similarity=0.374  Sum_probs=94.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEee-------ccCC---CCCC-
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY-------NYGV---DKYD-  165 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~-------~~~~---~~~~-  165 (268)
                      ++.+|+||+|.|+|++++++||+++|||++......++.....+++..++    ..+++..       ....   .... 
T Consensus         2 ~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~   77 (134)
T 3l7t_A            2 KLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD----IELEIFGNKLTDSNYCAPPERISWPR   77 (134)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT----EEEEEEECCTTSTTCCCCCCCCCSSS
T ss_pred             ceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC----eEEEEEecccccccccCCccccCCCC
Confidence            35799999999999999999999999999987765554444456666653    2455555       1111   1122 


Q ss_pred             CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          166 IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       166 ~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      .+.|+.|++|.|+|+++++++|+++|+++..++....+| .+.++++|||||.|||+|
T Consensus        78 ~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           78 EACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTG-KKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSC-CEEEEEECTTCCEEEEEC
T ss_pred             CCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCc-eEEEEEECCCCCEEEEeC
Confidence            456888999999999999999999999987666554444 588999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.83  E-value=4.8e-20  Score=143.50  Aligned_cols=123  Identities=24%  Similarity=0.264  Sum_probs=93.8

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEe-cCCCCceeEEEEeeCCCCceEEEEEeeccCCCCC-----CCCCC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKR-DIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-----DIGTG  169 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-----~~g~g  169 (268)
                      .|+.+|+||+|.|+|++++++||+ +|||++.... ..+..+...+++..+.    ..+++.........     ..+.|
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETT----EEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCC----EEEEEEecCCCCChHHHHHhcCCc
Confidence            478899999999999999999999 9999986542 2233445667776642    45666654322111     11578


Q ss_pred             eeEEEEEECCHHHHHHHHHHcCCeEeeCCcc--cCCCCeEEEEEECCCCCEEEEEEe
Q 024414          170 FGHFGIAVDDVAKTVELIKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~--~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +.|++|.|+|+++++++|+++|+++..+|..  ..+ +.+.+|++|||||.|||+|.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~-g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAID-NRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGT-TEEEEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCC-CceEEEEECCCceEEEEecC
Confidence            8999999999999999999999998776432  233 46889999999999999984

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.83  E-value=2e-19  Score=142.41  Aligned_cols=123  Identities=54%  Similarity=0.914  Sum_probs=94.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||++......+++.+..+++..++......+++...........+.+..|++|.|
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v   85 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGV   85 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEE
T ss_pred             cceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEe
Confidence            67899999999999999999999999999876543333455577776653123456666543333334456889999999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +|+++++++|+++|+++..+     +|....+|++|||||.|||++..
T Consensus        86 ~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           86 EDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             SCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             CCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            99999999999999998754     34333459999999999999864

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.83  E-value=1e-19  Score=139.94  Aligned_cols=120  Identities=19%  Similarity=0.347  Sum_probs=94.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC--CCCCCCCCeeEEEEE
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DKYDIGTGFGHFGIA  176 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~~~g~g~~hi~f~  176 (268)
                      ++|+||+|.|+|++++++||+++|||++......++.++..+++..++ +  ..+++......  .+...+.|+.|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-G--ARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS-S--CEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC-C--cEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            579999999999999999999999999877644344455667777654 2  45666654322  222255678899999


Q ss_pred             ECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          177 VDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       177 V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      |+|   +++++++|+++|+++..+|...++| .+.++++|||||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDG-YYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCC-cEEEEEECCCCCEEEEe
Confidence            999   8899999999999998877766664 57899999999999997

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.82  E-value=6e-19  Score=162.60  Aligned_cols=158  Identities=21%  Similarity=0.338  Sum_probs=121.4

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC--CCceeEEEEeeCCCCceEEEEEeeccCCCCC----------C
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP--EEKYTNAFLGYGPEDSHFVIELTYNYGVDKY----------D  165 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~----------~  165 (268)
                      +.+|+||.|.|+|++++++||+++|||++..+...+  ........+..++    +.+++.........          .
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGS----ARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCC----EEEEEecCCCCCCcchhHHHHHHHh
Confidence            679999999999999999999999999998764321  1123445555442    45666653221111          1


Q ss_pred             CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccC--CCCeEEEEEECCCCCEEEEEEeC-------C-----C----
Q 024414          166 IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG-------P-----T----  227 (268)
Q Consensus       166 ~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~--~G~~~~~~~~DPdG~~iEl~e~~-------~-----~----  227 (268)
                      ++.++.|++|.|+|+++++++++++|+++..+|....  .|..+.+.++||+|+.++|+++.       +     .    
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~~~~  175 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVE  175 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCCSSC
T ss_pred             cCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcccccccc
Confidence            3678999999999999999999999999987776432  23446788999999999999863       1     0    


Q ss_pred             ------CCCceeEEEEcC--CHHHHHHHHHHhcCCeEeee
Q 024414          228 ------PEPLCQVMLRVG--DLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       228 ------~~~l~~v~L~v~--d~~~s~~FY~~vlG~~~~~~  259 (268)
                            ..+++|++++|.  |++++++||+++|||++.+.
T Consensus       176 ~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~  215 (381)
T 1t47_A          176 PPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKE  215 (381)
T ss_dssp             CCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSC
T ss_pred             CCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeee
Confidence                  124799999999  99999999999999998765

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.82  E-value=9.8e-19  Score=159.37  Aligned_cols=157  Identities=18%  Similarity=0.233  Sum_probs=120.0

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC------CCCCCCee
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK------YDIGTGFG  171 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~------~~~g~g~~  171 (268)
                      +.+|+||.+.|+|++++++||+++|||++..+.....+  ....+..++    ..+.+..+.....      ..++.++.
T Consensus         3 i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~g~g~~   76 (357)
T 2r5v_A            3 NFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQ----VTLVLTEPTSDRHPAAAYLQTHGDGVA   76 (357)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETT----EEEEEEEESSTTSHHHHHHHHHSSEEE
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCC----EEEEEeCCCCCCCHHHHHHHhcCCeEE
Confidence            67999999999999999999999999999876543322  233444442    3455554211111      11457899


Q ss_pred             EEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-----------------------C
Q 024414          172 HFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------------P  228 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-----------------------~  228 (268)
                      |++|.|+|+++++++++++|+++..+|.+...|..+.+.++||+|..++|+++...                       .
T Consensus        77 ~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~~~  156 (357)
T 2r5v_A           77 DIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVDL  156 (357)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTCCC
T ss_pred             EEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCCCc
Confidence            99999999999999999999999877665444555678899999999999986310                       1


Q ss_pred             CCceeEEEEcC--CHHHHHHHHHHhcCCeEeeee
Q 024414          229 EPLCQVMLRVG--DLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       229 ~~l~~v~L~v~--d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      ..++|++|.|.  |++++.+||+++|||++.+..
T Consensus       157 ~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~  190 (357)
T 2r5v_A          157 LGIDHFAICLNAGDLGPTVEYYERALGFRQIFDE  190 (357)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEE
T ss_pred             ceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEE
Confidence            24799999999  999999999999999987543

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.81  E-value=1.8e-19  Score=137.99  Aligned_cols=122  Identities=24%  Similarity=0.380  Sum_probs=90.0

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC---CCCCCCCCCeeEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHF  173 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~~g~g~~hi  173 (268)
                      |+.+|+||+|.|+|++++++||+++|||++......++.....+++..++.    .+++.....   ......+.|..|+
T Consensus         2 ~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~~   77 (126)
T 2p25_A            2 FFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRHL   77 (126)
T ss_dssp             TTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCCE
T ss_pred             cccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceEE
Confidence            467899999999999999999999999998865432222222344555532    455554221   1112234578899


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      +|.|+|+++++++|+++|+++..++...++| .+.+|++|||||.|||+|
T Consensus        78 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           78 AFKVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEECSCHHHHHHHHHHTTCCCCCCEECTTTC-CEEEEEECTTCCEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHcCCccccccccCCCC-cEEEEEECCCCCEEEeeC
Confidence            9999999999999999999987665544444 578999999999999985

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.81  E-value=5.7e-19  Score=145.82  Aligned_cols=129  Identities=36%  Similarity=0.611  Sum_probs=100.3

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCc---------------eEEEEEeeccC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS---------------HFVIELTYNYG  160 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~---------------~~~lel~~~~~  160 (268)
                      ....+|+||+|.|+|++++++||+++|||++......+...+..+++..+....               ...+++.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            346799999999999999999999999999998777666677788887654311               13466644322


Q ss_pred             C-----CCCC----CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          161 V-----DKYD----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       161 ~-----~~~~----~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      .     ..+.    ...|+.|++|.|+|+++++++|+++|+++..++...+++  +.+|++|||||.|||+++..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~--~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK--GLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSST--TCEEEECTTCCEEEEECGGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcc--eEEEEECCCCCEEEEEEccc
Confidence            1     1111    224889999999999999999999999998887766554  35899999999999998754

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.81  E-value=1.4e-18  Score=137.83  Aligned_cols=126  Identities=21%  Similarity=0.227  Sum_probs=94.2

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC-----------CCCceeEEEEeeCCCCceEEEEEeec--cCCC-
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI-----------PEEKYTNAFLGYGPEDSHFVIELTYN--YGVD-  162 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~~~~~~~lel~~~--~~~~-  162 (268)
                      ++.+|+||.|.|+|++++++||++ |||++......           +......+++..+++..  .+++...  .... 
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~--~l~l~~~~~~~~~~   84 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS--RIELSRFLTPPTIA   84 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSC--EEEEEEEEESCCCC
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCc--EEEEEEecCCCCcc
Confidence            467899999999999999999999 99998865431           11234567777654322  3444432  1111 


Q ss_pred             ----CCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          163 ----KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       163 ----~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                          ....+.|+.|++|.|+|+++++++|+++|+++..++...++| .+.+|++|||||.|||+++..
T Consensus        85 ~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           85 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEECC
T ss_pred             cccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCc-eEEEEEECCCCCEEEEEeccC
Confidence                112345788999999999999999999999998777666554 688999999999999998754

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.81  E-value=4.5e-19  Score=143.57  Aligned_cols=127  Identities=25%  Similarity=0.448  Sum_probs=98.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCC------CCCCCe
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY------DIGTGF  170 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~------~~g~g~  170 (268)
                      ++.+|+||+|.|+|++++++||+++|||++......++.+...+++..++    ..+++.........      ..+.|+
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g~   80 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEGI   80 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSEE
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCCe
Confidence            46799999999999999999999999999987655444555677777653    45666654322211      235689


Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeEeeC-CcccCCCCeEEEEEE--CCCCCEEEEEEeCCCC
Q 024414          171 GHFGIAVDDVAKTVELIKAKGGKVTRE-PGPVKGGNTVIAFIE--DPDGYKFELLERGPTP  228 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~~G~~i~~~-p~~~~~G~~~~~~~~--DPdG~~iEl~e~~~~~  228 (268)
                      .|++|.|+|+++++++|+++|+++..+ +....+| .+.+|+.  |||||.|||++..+..
T Consensus        81 ~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g-~~~~f~~~~DPdG~~iEl~~~~~~~  140 (161)
T 3oa4_A           81 HHIAIGVKSIEERIQEVKENGVQMINDEPVPGARG-AQVAFLHPRSARGVLYEFCEKKEQA  140 (161)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGG-CEEEEBCGGGTTTCCEEEEECCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEecccCcccCCCC-cEEEEEeccCCCeEEEEEEecCCcc
Confidence            999999999999999999999998766 5544444 4667773  9999999999988653

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.81  E-value=1.3e-18  Score=162.59  Aligned_cols=162  Identities=17%  Similarity=0.227  Sum_probs=119.6

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC--CCceeEEEEeeCCCCceEEEEEeeccCCC-------------
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP--EEKYTNAFLGYGPEDSHFVIELTYNYGVD-------------  162 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~--~~~~~~~~l~~g~~~~~~~lel~~~~~~~-------------  162 (268)
                      +.+|+||.|.|+|++++++||+++|||++..+.+.+  ...+..++++.++    +.+++..+....             
T Consensus        23 i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~----~~l~L~~~~~~~~~~~~~~~~~~~p   98 (424)
T 1sqd_A           23 VKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD----LRFLFTAPYSPSLSAGEIKPTTTAS   98 (424)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETT----EEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             CCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCC----EEEEEecCCCCcccccccccccccc
Confidence            568999999999999999999999999998775432  2233445555432    455555542111             


Q ss_pred             --C----------CCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---
Q 024414          163 --K----------YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---  227 (268)
Q Consensus       163 --~----------~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---  227 (268)
                        .          ..++.|+.|++|.|+|+++++++++++|+++..+|....+ ..+...+++|.|+.++|+++...   
T Consensus        99 ~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~~~~  177 (424)
T 1sqd_A           99 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDTE  177 (424)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC---
T ss_pred             cccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCCCCC
Confidence              0          0135789999999999999999999999999887765533 34566677777777777765321   


Q ss_pred             ----------------------CCCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCC
Q 024414          228 ----------------------PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE  264 (268)
Q Consensus       228 ----------------------~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~  264 (268)
                                            ..+++|++++|.|++++++||+++|||++.+..+.++
T Consensus       178 ~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d  236 (424)
T 1sqd_A          178 KSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADD  236 (424)
T ss_dssp             ---CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC---
T ss_pred             ccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccc
Confidence                                  0247999999999999999999999999988876553

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.80  E-value=8.5e-19  Score=138.32  Aligned_cols=128  Identities=21%  Similarity=0.345  Sum_probs=95.6

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCC--CceEEEEEeeccCCCCC------CCC-
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE--DSHFVIELTYNYGVDKY------DIG-  167 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~~~lel~~~~~~~~~------~~g-  167 (268)
                      |+.+|+||.|.|+|++++++||+++|||++......++.+...+++..++.  .....+++.........      ..+ 
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   85 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCC
Confidence            678999999999999999999999999999876544434445677776642  11245666654322111      133 


Q ss_pred             -CCeeEEEEEECCHHHHHHHHHHcCCeEe-eCCcccCCCCeEEEEE--ECCCCCEEEEEEeC
Q 024414          168 -TGFGHFGIAVDDVAKTVELIKAKGGKVT-REPGPVKGGNTVIAFI--EDPDGYKFELLERG  225 (268)
Q Consensus       168 -~g~~hi~f~V~Did~~~~~L~~~G~~i~-~~p~~~~~G~~~~~~~--~DPdG~~iEl~e~~  225 (268)
                       .|+.|++|.|+|+++++++|+++|+++. .++....+| .+.+++  +|||||.|||++..
T Consensus        86 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g-~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           86 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCc-eEEEEEeecCCCcEEEEEEecC
Confidence             6788999999999999999999999987 445544444 466666  89999999999865

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.79  E-value=1.1e-18  Score=138.66  Aligned_cols=127  Identities=19%  Similarity=0.249  Sum_probs=93.5

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC------CceeEEEEeeCCCCceEEEEEeeccCCC-----CC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE------EKYTNAFLGYGPEDSHFVIELTYNYGVD-----KY  164 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~------~~~~~~~l~~g~~~~~~~lel~~~~~~~-----~~  164 (268)
                      .++.+|+||+|.|+|++++++||+++|||++......++      ..-..+++..+++   ..+++.......     ..
T Consensus        15 ~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           15 GNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDG---TILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             TSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTS---CEEEEEECTTCCCSSSSTT
T ss_pred             cccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCC---CEEEEEecCCCCcCCCCCC
Confidence            468899999999999999999999999999876322111      0112356665532   345555532211     12


Q ss_pred             CCCCCeeEEEEEEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          165 DIGTGFGHFGIAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       165 ~~g~g~~hi~f~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      ....+..|++|.|+  |+++++++|+++|+++..++...++|  +.+|++|||||.|||++....
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~~~  154 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTG--RGVYFYDPDGFMIEIRCDPEA  154 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CC--EEEEEECTTSCEEEEEECCC-
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCc--cEEEEECCCCCEEEEEecCCC
Confidence            23467889999999  99999999999999998777766554  589999999999999987653

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.79  E-value=1.7e-18  Score=135.65  Aligned_cols=123  Identities=24%  Similarity=0.318  Sum_probs=92.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC--CCC-CCCCCeeEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DKY-DIGTGFGHF  173 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~~-~~g~g~~hi  173 (268)
                      |+.+|+||.|.|+|++++++||+++|||++.......+..+..+++. +  .  ..+++......  ... ....|..|+
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~--~--~~l~l~~~~~~~~~~~~~~~~g~~h~   76 (136)
T 2rk0_A            2 SLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G--G--LSIVLREHDGGGTDLFDETRPGLDHL   76 (136)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T--S--CEEEEEEETTCSSSCCCTTSSEEEEE
T ss_pred             CCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C--C--CEEEEEeCCCCcccCCCCCCCCcceE
Confidence            46789999999999999999999999999987655333334445554 2  2  34666553221  111 244678899


Q ss_pred             EEEE---CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          174 GIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       174 ~f~V---~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      +|.|   +|+++++++|+++|+++. ++...++|  +.+|++|||||.|||++..+.
T Consensus        77 ~f~v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~g--~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           77 SFSVESMTDLDVLEERLAKAGAAFT-PTQELPFG--WILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             EEEESSHHHHHHHHHHHHHHTCCBC-CCEEETTE--EEEEEECTTCCEEEEEEECTT
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCccc-CccccCCc--eEEEEECCCCCEEEEEEcCCC
Confidence            9999   889999999999999976 34444443  889999999999999998764

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.79  E-value=3e-18  Score=132.55  Aligned_cols=119  Identities=22%  Similarity=0.343  Sum_probs=90.6

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC---CCCCCCCCCeeEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHFG  174 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~~g~g~~hi~  174 (268)
                      +.+|+||+|.|+|++++++||+++|||++.....      ..+++..++    ..+.+.....   ........+..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGH----QKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETT----EEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCC----EEEEEEcCCCCccccCCCCCCCccEEE
Confidence            6699999999999999999999999999987532      135555553    3445444221   11122455788999


Q ss_pred             EEECC-HHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEEeCC
Q 024414          175 IAVDD-VAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       175 f~V~D-id~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |.|+| +++++++|+++|+++..++...++  |..+.++++|||||.|||++..+
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 999999999999998876654443  33488999999999999999754

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.78  E-value=4.3e-18  Score=134.85  Aligned_cols=114  Identities=21%  Similarity=0.296  Sum_probs=88.8

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      ++.+|+||+|.|+|++++++||+++|||++.......    ..+++..++.  ...+.+....      ...+..|++|.
T Consensus        25 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~--~~~l~l~~~~------~~~~~~h~~~~   92 (141)
T 3ghj_A           25 NIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR----RWNFLWVSGR--AGMVVLQEEK------ENWQQQHFSFR   92 (141)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT----TEEEEEETTT--TEEEEEEECC------SSCCCCEEEEE
T ss_pred             eeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC----cEEEEEecCC--CcEEEEeccC------CCCCCceEEEE
Confidence            5789999999999999999999999999998765322    2455655542  3456666531      12456799999


Q ss_pred             EC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          177 VD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       177 V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      |+  |+++++++|+++|+++. ++....+++.+.+||+|||||.|||++
T Consensus        93 v~~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           93 VEKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             ECGGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EeHHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            97  99999999999999987 344444455789999999999999986

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.78  E-value=9.1e-19  Score=140.92  Aligned_cols=122  Identities=25%  Similarity=0.329  Sum_probs=94.2

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC--------------CCceeEEEEeeCCCCceEEEEEeeccCC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP--------------EEKYTNAFLGYGPEDSHFVIELTYNYGV  161 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~lel~~~~~~  161 (268)
                      .+..+|+||+|.|+|++++++||+++|||++......+              ..+...+++..++    ..+++......
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~----~~leL~~~~~~   90 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP----LQLELIEPDEN   90 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT----EEEEEEEECSS
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC----EEEEEEEECCC
Confidence            45678999999999999999999999999976544322              2345567776653    46777765332


Q ss_pred             CCC------CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCC--CCEEEEEEe
Q 024414          162 DKY------DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLER  224 (268)
Q Consensus       162 ~~~------~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPd--G~~iEl~e~  224 (268)
                      ...      ..+.|+.|+||.|+|+++++++|+++|+++..++. .  ++.+.+|+.|||  |+.|||+|+
T Consensus        91 ~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           91 PSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F--EGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E--TTEEEEEESCHHHHSSEEEEEEE
T ss_pred             CChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c--CCeeEEEEeccccCcEEEEEEec
Confidence            211      13678999999999999999999999999876542 2  246899999999  999999986

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.78  E-value=4.6e-18  Score=135.62  Aligned_cols=121  Identities=23%  Similarity=0.311  Sum_probs=90.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC---CCCCCCCCCeeEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFGHF  173 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~~g~g~~hi  173 (268)
                      ++.+|+||+|.|+|++++++||+++|||++....+      ..+++..++    ..+.+.....   ........|..|+
T Consensus        20 ~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~g~~hi   89 (152)
T 3huh_A           20 IIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGA----QKINLHQQEMEFEPKASRPTPGSADL   89 (152)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETT----EEEEEEETTBCCSSCCSSCCTTCCEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCC----eEEEEeccCCcCCCcCcCCCCCccEE
Confidence            46799999999999999999999999999987622      235565553    2455544221   1122245578899


Q ss_pred             EEEEC-CHHHHHHHHHHcCCeEeeCCcccCCC--CeEEEEEECCCCCEEEEEEeCCC
Q 024414          174 GIAVD-DVAKTVELIKAKGGKVTREPGPVKGG--NTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       174 ~f~V~-Did~~~~~L~~~G~~i~~~p~~~~~G--~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      +|.++ |+++++++|+++|+++..+|...+++  ..+.+|++|||||.|||++..++
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            99997 99999999999999987766554432  35889999999999999988763

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.77  E-value=7.2e-18  Score=157.21  Aligned_cols=162  Identities=14%  Similarity=0.150  Sum_probs=118.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC--CceeEEEEeeCCCCceEEEEEeeccCCC-------------
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE--EKYTNAFLGYGPEDSHFVIELTYNYGVD-------------  162 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~~~~~-------------  162 (268)
                      +.+|+||.|.|+|++++++||++.|||++..+...+.  .....+++..++    ..+++.......             
T Consensus        29 i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~----~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           29 TLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS----LSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT----EEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC----EEEEEecCCCCcccccccccccccc
Confidence            5799999999999999999999999999887754321  233455565553    345665542210             


Q ss_pred             C------CCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---------
Q 024414          163 K------YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------  227 (268)
Q Consensus       163 ~------~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---------  227 (268)
                      .      ..++.|+.||+|.|+|+++++++++++|+++..+|....+ ..+...+++|.|..++|+++...         
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~~~~~~~f~p~  183 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAGEPFLPG  183 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGGSSSSTT
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCCCCCCcccCCC
Confidence            0      0145789999999999999999999999998877754422 24455566666666666665310         


Q ss_pred             -------------CCCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCC
Q 024414          228 -------------PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPE  264 (268)
Q Consensus       228 -------------~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~  264 (268)
                                   ..+++|++++|.|++++++||+++|||++.+..+.++
T Consensus       184 ~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d  233 (418)
T 1sp8_A          184 FEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTED  233 (418)
T ss_dssp             CEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--
T ss_pred             CcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccc
Confidence                         1247999999999999999999999999988765543

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.77  E-value=5.6e-18  Score=132.23  Aligned_cols=115  Identities=16%  Similarity=0.088  Sum_probs=88.5

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      ..+++||.|.|+|++++++||+++|||++....+    .  .+.+..++   ...+.+....... .....+..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----R--YVAFPSSG---DALFAIWSGGEEP-VAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----S--EEEEECST---TCEEEEESSSCCC-CTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----C--EEEEEcCC---CcEEEEEeCCCCC-cCCCCCcceEEEEe
Confidence            5689999999999999999999999999876433    1  23333332   1345665533211 12335678999999


Q ss_pred             CC---HHHHHHHHHH---cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          178 DD---VAKTVELIKA---KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       178 ~D---id~~~~~L~~---~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +|   +++++++|++   +|+++..+|.+.++|  +.++++|||||.|||++.
T Consensus        81 ~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            86   9999999999   999998888777665  889999999999999975

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.77  E-value=8e-18  Score=138.81  Aligned_cols=129  Identities=36%  Similarity=0.613  Sum_probs=94.8

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCC---------------CceEEEEEeeccCC
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE---------------DSHFVIELTYNYGV  161 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~lel~~~~~~  161 (268)
                      ...+|+||.|.|+|++++++||+++|||++......++..+..+++..++.               .....+++......
T Consensus        28 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~  107 (184)
T 2za0_A           28 KDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGT  107 (184)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCC
Confidence            467999999999999999999999999999876543333455566654321               01235666543211


Q ss_pred             ---C--CCC----CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          162 ---D--KYD----IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       162 ---~--~~~----~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                         +  .+.    ...|..|++|.|+|+++++++|+++|+++..++...+++  +.+|++|||||.|||++...-
T Consensus       108 ~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~--~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          108 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK--GLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             GGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSST--TCEEEECTTCCEEEEECTTTG
T ss_pred             CCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCce--eEEEEECCCCCEEEEEecCcc
Confidence               0  111    125788999999999999999999999998877665443  468999999999999987653

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.76  E-value=1e-17  Score=130.26  Aligned_cols=119  Identities=19%  Similarity=0.240  Sum_probs=88.0

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCcee---EEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYT---NAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHF  173 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~---~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi  173 (268)
                      |+.+|+||.|.|+|++++++||+++|||++....+.  ..+.   ..++..+.    ..+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGD--KTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCC--cccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEE
Confidence            678999999999999999999999999998754321  1110   11444442    34666543221    14577899


Q ss_pred             EEEEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          174 GIAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       174 ~f~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      +|.|+  |+++++++++++|+++..++...+++ .+.++++|||||.|||+++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGE-GRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTC-CCEEEEECSSSCEEEEECSSC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCC-eeEEEEECCCCCEEEEEcCCh
Confidence            99995  99999999999999998776654443 478999999999999998764

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.76  E-value=1e-17  Score=127.84  Aligned_cols=115  Identities=19%  Similarity=0.198  Sum_probs=85.2

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      .++++|+.|.|+|++++++||+++|||++....+    +  .+++..++  .  .+.+......+....+.+. |++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~-~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS--H--CLMLSQNHLVPLENFQSGI-IIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT--E--EEEEESSCSSSCCCCCSCE-EEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCC--e--EEEEEcCCCCCcccCCCeE-EEEEEE
Confidence            3689999999999999999999999999875322    1  34455543  2  2333221111111223344 899999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          178 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       178 ~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +|+++++++|+++|+++..++.+.++| .+.++++|||||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            999999999999999998777777665 4788999999999999975

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.76  E-value=6.1e-18  Score=133.05  Aligned_cols=120  Identities=17%  Similarity=0.252  Sum_probs=86.6

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCce-eEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY-TNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      |+.+|+||.|.|+|++++++||+++|||++........... ...++..+.    ..+.+......+    ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~----~~~~~h~~~   72 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEKLA----ERSYNHIAF   72 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCCCS----SCCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECC----EEEEEEeCCCCC----CCCeeEEEE
Confidence            57899999999999999999999999999886543211000 011444442    346665432211    457789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          176 AVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       176 ~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      .|+  |+++++++|+++|+++..++...++ +.+.+|++|||||.|||++..
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCC
Confidence            999  9999999999999998776554443 357899999999999999754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.76  E-value=9.3e-18  Score=134.39  Aligned_cols=121  Identities=15%  Similarity=0.121  Sum_probs=86.8

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC-CCCCCCeeEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK-YDIGTGFGHFGI  175 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~-~~~g~g~~hi~f  175 (268)
                      |+.+|+||.|.|+|++++++||+++|||++....+      ..+++..+++   ..+.+........ .....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g---~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTG---LRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTS---CEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCC---cEEEEecCCcCCccccCCCCeEEEEE
Confidence            56799999999999999999999999999876532      1345554322   3455544322211 123346679999


Q ss_pred             EECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          176 AVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       176 ~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      .|+|   +++++++|+++|+++..++...++|  +.++++|||||.|||++..+..
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~a  127 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRTA  127 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC---
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChhH
Confidence            9987   9999999999999998888877764  8899999999999999988653

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.76  E-value=2.1e-17  Score=127.57  Aligned_cols=117  Identities=17%  Similarity=0.207  Sum_probs=87.7

Q ss_pred             cCceeeEEEEEe--CCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEE
Q 024414           97 DKRRMLHVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFG  174 (268)
Q Consensus        97 ~~~~l~HV~l~V--~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  174 (268)
                      |+.+|+||+|.|  +|++++++||+++|||++......... ....++..++    ..+.+.....    ....+..|++
T Consensus         7 ~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~----~~l~l~~~~~----~~~~~~~~~~   77 (126)
T 2qqz_A            7 YIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCGN----QEIHIGVEQN----FNPAKRAHPA   77 (126)
T ss_dssp             CEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEETT----EEEEEEECTT----CCCCSSSCEE
T ss_pred             ccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeCC----EEEEEEecCC----CCCCCceEEE
Confidence            467899999999  899999999999999998764321100 0124565543    2455544221    1134678999


Q ss_pred             EEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          175 IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       175 f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      |.|+|+++++++|+++|+++..++. . +| .+.++++|||||.|||+++.
T Consensus        78 f~v~d~~~~~~~l~~~G~~~~~~~~-~-~g-~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           78 FYVLKIDEFKQELIKQGIEVIDDHA-R-PD-VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEETTHHHHHHHHHHTTCCCEEECS-S-TT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCCccCCCC-C-CC-eeEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999887663 2 33 68899999999999999874

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.75  E-value=4.1e-17  Score=150.74  Aligned_cols=160  Identities=19%  Similarity=0.300  Sum_probs=123.9

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC--ceeEEEEeeCCCCceEEEEEeeccCCCC-------CCCCC
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVDK-------YDIGT  168 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~-------~~~g~  168 (268)
                      +.+|+||.|.|+|++++++||+++|||++......+.+  ....+.+..++    +.+++..+.....       ..++.
T Consensus         9 i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~----i~~~L~~p~~p~s~~~a~fl~~hG~   84 (393)
T 3isq_A            9 FLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGK----IVFVLSSALNPWNKEMGDHLVKHGD   84 (393)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCC----EEEEEecCCCCCchHHHHHHHhcCC
Confidence            67999999999999999999999999999876543311  22344555542    4566665322211       12567


Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEEeCC-----------C--------
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP-----------T--------  227 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e~~~-----------~--------  227 (268)
                      |+.|+||.|+|+++++++++++|+++..+|....+  |..+...+++|.|..+.|+++..           .        
T Consensus        85 Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~~~~  164 (393)
T 3isq_A           85 GVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLP  164 (393)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCTTGG
T ss_pred             cEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcccccccccccc
Confidence            99999999999999999999999999988876543  44578889999999999998631           0        


Q ss_pred             --C----CCceeEEEEcCC--HHHHHHHHHHhcCCeEeeeec
Q 024414          228 --P----EPLCQVMLRVGD--LDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       228 --~----~~l~~v~L~v~d--~~~s~~FY~~vlG~~~~~~~~  261 (268)
                        +    .+++|+.++|.|  ++++++||+++|||+..+..+
T Consensus       165 ~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d  206 (393)
T 3isq_A          165 KLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVD  206 (393)
T ss_dssp             GSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEC
T ss_pred             CCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEecccc
Confidence              1    237999999987  999999999999999877644

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.75  E-value=1.2e-17  Score=130.41  Aligned_cols=119  Identities=18%  Similarity=0.215  Sum_probs=83.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEe-eCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLG-YGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      |...|+||.|.|+|++++++||++ |||++..... +.+.  .+++. .+.    ..+.+.....  ......+..|++|
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~--~~~~~~~~~----~~l~l~~~~~--~~~~~~~~~~l~f   72 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGS--EVHRAVHNG----VEFSLYSIQN--PQRSQIPSLQLGF   72 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEETT----EEEEEEECCC--CSSCCCCSEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCC--EEEEEeCCC----eEEEEEECCC--CcCCCCCceEEEE
Confidence            567899999999999999999999 9999876421 1112  23333 221    2344433211  1123345578999


Q ss_pred             EECCHHHHHHHHHHcCCe-EeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          176 AVDDVAKTVELIKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       176 ~V~Did~~~~~L~~~G~~-i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      .|+|+++++++|+++|++ +..+|...++| .+ ++|+|||||.|||++.++.
T Consensus        73 ~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           73 QITDLEKTVQELVKIPGAMCILDPTDMPDG-KK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             EESCHHHHHHHHTTSTTCEEEEEEEECC-C-EE-EEEECTTCCEEEEEC----
T ss_pred             EeCCHHHHHHHHHHCCCceeccCceeCCCc-cE-EEEECCCCCEEEEEEeccc
Confidence            999999999999999999 87777777775 45 9999999999999987753

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.75  E-value=1.4e-17  Score=130.89  Aligned_cols=126  Identities=21%  Similarity=0.305  Sum_probs=91.3

Q ss_pred             HhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeE
Q 024414           93 WVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH  172 (268)
Q Consensus        93 ~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  172 (268)
                      |.. |...+.||+|.|+|++++++||+++|||++...... .+++..+++..+..  .+.+++...........+.+..|
T Consensus         5 ~~~-m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~h   80 (139)
T 1twu_A            5 FSS-FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSL   80 (139)
T ss_dssp             CSS-CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCE
T ss_pred             CCC-CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccE
Confidence            554 677788999999999999999999999998765432 23345566765533  23466654333223344567789


Q ss_pred             EEEEECCH---HHHHHHHHHcCCeEee--CCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          173 FGIAVDDV---AKTVELIKAKGGKVTR--EPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       173 i~f~V~Di---d~~~~~L~~~G~~i~~--~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ++|.|+|+   ++++++|+++|+++..  .+.....  +  .|++|||||.|||+++..
T Consensus        81 i~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~--g--~~~~DPdG~~iel~~~~~  135 (139)
T 1twu_A           81 LVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNG--G--VTIEDPDGWRIVFMNSKG  135 (139)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSS--E--EEEECTTCCEEEEESSCC
T ss_pred             EEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCC--C--eEEECCCCCEEEEEEcCC
Confidence            99999999   9999999999999873  2222222  2  269999999999998643

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.75  E-value=2.6e-17  Score=128.96  Aligned_cols=118  Identities=17%  Similarity=0.166  Sum_probs=85.9

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCC--CCCCCCCeeEEEEEECCHH
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD--KYDIGTGFGHFGIAVDDVA  181 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~--~~~~g~g~~hi~f~V~Did  181 (268)
                      |.|.|+|++++++||+++|||++......+ +....+.+..++  .  .+.+.......  ....+.++.|++|.|+|++
T Consensus         6 i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv~   80 (137)
T 3itw_A            6 VELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG--G--IVMVRRTGEPYTVSCAGGHTCKQVIVWVSDVD   80 (137)
T ss_dssp             EEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS--S--EEEEEETTCCSSCEECCCCCCCEEEEEESCHH
T ss_pred             EEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC--e--EEEEEecCCCcCccCCCCCcEEEEEEEeCCHH
Confidence            449999999999999999999998765443 333344554443  2  34444321111  1112233449999999999


Q ss_pred             HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          182 KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       182 ~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      +++++|+++|+++..++...++| .+.++++|||||.|||+++.+.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  125 (137)
T 3itw_A           81 EHFMRSTAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHLRD  125 (137)
T ss_dssp             HHHHHHHHTTCEEEEEEEEETTT-EEEEEEECSSSCEEEEEECC--
T ss_pred             HHHHHHHHcCCeeccCccccCCC-cEEEEEECCCCCEEEEEEEcCC
Confidence            99999999999998888777765 5889999999999999998653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.75  E-value=5.3e-17  Score=127.94  Aligned_cols=115  Identities=22%  Similarity=0.384  Sum_probs=88.0

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC-CCCCCCCCeeEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-DKYDIGTGFGHFGI  175 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~f  175 (268)
                      |+.+|+||.|.|+|++++++||+++|||++....+.      ..++..+.    ..+.+...... .......+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~------~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGD----LWVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETT----EEEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecCC------cEEEEECC----EEEEEEECCCCCCCCCCCCCceEEEE
Confidence            678999999999999999999999999998875431      24555542    23555443211 11223457789999


Q ss_pred             EEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          176 AVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       176 ~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      .|+  |+++++++|+++|+++..++..    ..+.++++|||||.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECc
Confidence            997  9999999999999998876542    247899999999999999865

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.75  E-value=4.3e-17  Score=127.55  Aligned_cols=113  Identities=22%  Similarity=0.366  Sum_probs=87.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      |+.+|+||.|.|+|++++++||+++|||++....+  .    ..++..+.    ..+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC----EEEEEEeCCCC--CCCCCCcceEEEE
Confidence            57899999999999999999999999999886542  1    24555542    23555543211  2234577899999


Q ss_pred             EC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          177 VD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       177 V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      |+  |+++++++|+++|+++..++..  .  ++.++++|||||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~--~--~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS--E--GDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS--S--SCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC--C--eEEEEEECCCCCEEEEEECC
Confidence            98  9999999999999998876543  2  36799999999999999765

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.74  E-value=5.9e-17  Score=126.31  Aligned_cols=118  Identities=21%  Similarity=0.269  Sum_probs=86.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      ..+|+||+|.|+|++++++||+++|||++....+      ..+.+..+.  ..+.+.+..... .+  ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g--~~~~l~~~~~~~-~~--~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFG--DQLVCHLSDRWD-RE--VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT--EEEEEEECSCSC-SS--CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeC--CEEEEEEcCccc-cc--CCCCCCeEEEEE
Confidence            4689999999999999999999999999965533      123444322  223343332211 11  334567999998


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCccc---CCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~---~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      +   |+++++++|+++|+++..+|...   ..|..+.+|++|||||.|||++..+
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            6   59999999999999987766653   2345688999999999999998764

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.73  E-value=4.3e-17  Score=128.01  Aligned_cols=120  Identities=17%  Similarity=0.153  Sum_probs=89.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeecc------CCCCCCCCCCe
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY------GVDKYDIGTGF  170 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~------~~~~~~~g~g~  170 (268)
                      |..+|.|+.|.|+|++++++||++ |||++....+.  ..  .+.+..++ +  ..+.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~--~~--~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADS--AP--HTEAVLDG-G--IRLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGG--CS--EEEEECTT-S--CEEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCC--Cc--eEEEEcCC-C--eEEEEecCccchhhCcccCCCCCCCe
Confidence            567999999999999999999998 99997654321  11  23333322 2  345554421      11111234577


Q ss_pred             eEEEEEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          171 GHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       171 ~hi~f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      .|++|.|+   |+++++++|+++|+++..++.+.++| .+.++++|||||.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            89999999   99999999999999998877777665 68899999999999999987

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.73  E-value=2.8e-17  Score=130.80  Aligned_cols=116  Identities=17%  Similarity=0.230  Sum_probs=88.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCC-CCCCCeeEEEEEE
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-DIGTGFGHFGIAV  177 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-~~g~g~~hi~f~V  177 (268)
                      .+|.||.|.|+|++++++||+++|||++....+    .  .+++..++   ...+.+.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP----T--FSLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----T--EEEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----C--eEEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            489999999999999999999999999876542    1  24455543   234555543222221 2345778999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +   |+++++++|+++|+++..++...++|  +.++++|||||.|||+++.
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEFG--YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETTE--EEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCCc--eEEEEECCCCCEEEEEecC
Confidence            8   58999999999999988877776554  7899999999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.73  E-value=6e-17  Score=128.90  Aligned_cols=119  Identities=20%  Similarity=0.298  Sum_probs=86.5

Q ss_pred             hhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC---CCCCCCCCCee
Q 024414           95 KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYDIGTGFG  171 (268)
Q Consensus        95 ~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~~g~g~~  171 (268)
                      .-++.+|+||.|.|+|++++++||+++|||++....+  .    ..++..++  .  .+.+.....   ........|..
T Consensus        22 ~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~----~~~l~~g~--~--~l~l~~~~~~~~~~~~~~~~g~~   91 (147)
T 3zw5_A           22 SMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE--D----RKALCFGD--Q--KFNLHEVGKEFEPKAAHPVPGSL   91 (147)
T ss_dssp             HTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT--T----EEEEEETT--E--EEEEEETTSCCSSCCSSCCTTCC
T ss_pred             ceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC--C----ceEEEECC--c--EEEEEEcCCCcCcccCCCCCCCc
Confidence            3467899999999999999999999999999885422  1    24455553  2  344433211   11122344677


Q ss_pred             EEEEEEC-CHHHHHHHHHHcCCeEeeCCcccC--CCCeEEEEEECCCCCEEEEEE
Q 024414          172 HFGIAVD-DVAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       172 hi~f~V~-Did~~~~~L~~~G~~i~~~p~~~~--~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      |++|.+. |+++++++|+++|+++..+|....  .|..+.+||+|||||.|||++
T Consensus        92 ~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           92 DICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             eEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            9999886 999999999999999876554432  233468999999999999986

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.73  E-value=8.7e-17  Score=128.61  Aligned_cols=117  Identities=21%  Similarity=0.275  Sum_probs=86.4

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCc--------eEEEEEeeccCCCCCCCCC
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS--------HFVIELTYNYGVDKYDIGT  168 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~--------~~~lel~~~~~~~~~~~g~  168 (268)
                      |..+|+||.|.|+|++++++||+++|||++... .  +..  .+++..++...        .....+....      ...
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~--~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~------~~~   90 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-P--DMD--YSMVTTGPVGESGMPDEPGYINGGMMQRG------EVT   90 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-T--TTT--EEEEECSCBCTTSSBCSSSCBCEEEEESS------SSC
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC-C--CCC--EEEEEeCCcceeecccCCcccccceeecC------CCC
Confidence            567899999999999999999999999998763 1  122  34455543211        0112222211      113


Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      +. |++|.|+|+++++++|+++|+++..++.+.++ .++.+|++|||||.|||+++.+
T Consensus        91 g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           91 TP-VVTVDVESIESALERIESLGGKTVTGRTPVGN-MGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             SC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEECC
T ss_pred             eE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCC-CEEEEEEECCCCCEEEEEecCC
Confidence            44 99999999999999999999999877766652 2388999999999999999764

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.72  E-value=1.8e-17  Score=126.33  Aligned_cols=113  Identities=22%  Similarity=0.254  Sum_probs=85.6

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.++ |+.|.|+|++++++||+++|||++....    +  ...++..+.. ..+.+.+.....     ...+..|++|.|
T Consensus         6 i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~--~~~~~~~~~~-~~~~l~l~~~~~-----~~~~~~~~~~~v   72 (119)
T 2pjs_A            6 VRRV-VANIATPEPARAQAFYGDILGMPVAMDH----G--WIVTHASPLE-AHAQVSFAREGG-----SGTDVPDLSIEV   72 (119)
T ss_dssp             EEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S--SEEEEEEEEE-EEEEEEEESSSB-----TTBCCCSEEEEE
T ss_pred             eeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C--EEEEEecCCC-CcEEEEEEcCCC-----CCCceeEEEEEE
Confidence            4577 9999999999999999999999987641    1  1233433311 134455554211     123567999999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          178 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       178 ~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +|+++++++|+++|+++..++.+.++| .+.++++|||||.|||+++
T Consensus        73 ~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           73 DNFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             SCHHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            999999999999999988777776665 5889999999999999986

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.72  E-value=2.3e-17  Score=131.65  Aligned_cols=118  Identities=21%  Similarity=0.247  Sum_probs=85.8

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.++. +.|.|+|++++++||+++|||++......++..+...++  +.      +++......  .....+..|++|.|
T Consensus         5 i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~--~~------~~l~~~~~~--~~~~~~~~hl~f~V   73 (144)
T 3r6a_A            5 ILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQI--ST------ILLIAGSEE--ALKPFRNTQATFLV   73 (144)
T ss_dssp             EEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEE--TT------EEEEESCHH--HHGGGGGCCEEEEE
T ss_pred             EEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEe--cc------EEEecCCcc--cCCCCcceEEEEEe
Confidence            34555 899999999999999999999987665433333333322  21      233322110  11112457999999


Q ss_pred             CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          178 DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       178 ~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      +|+++++++|+++|+++..++.+.++|  +.++++|||||.|||+++.+.+
T Consensus        74 ~d~d~~~~~l~~~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           74 DSLDKFKTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC--
T ss_pred             CCHHHHHHHHHHcCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCCcc
Confidence            999999999999999998887777665  7899999999999999988654

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.72  E-value=5e-17  Score=129.67  Aligned_cols=119  Identities=21%  Similarity=0.307  Sum_probs=90.0

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC-----CCCCCCCCCee
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG-----VDKYDIGTGFG  171 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~-----~~~~~~g~g~~  171 (268)
                      |+.+|+||.|.|+|++++++||+++|||++....    .  ..+++..+.    ..+.+.....     ..+...+.+..
T Consensus         2 M~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~   71 (150)
T 3bqx_A            2 SLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMNG----FVLATWLVQNLQEDVGVAVTSRPGSM   71 (150)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECSS----SEEEEEEHHHHHHHHSSCCCSSCCSC
T ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcCC----EEEEEEeccccccccCCCCCCCCCeE
Confidence            4578999999999999999999999999987653    1  235555532    2455554211     00111145677


Q ss_pred             EEEEEE---CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          172 HFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       172 hi~f~V---~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |++|.|   +|+++++++|+++|+++..++.+.++| .+.++++|||||.|||++.+.
T Consensus        72 ~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           72 ALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             EEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTT
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCC
Confidence            999999   899999999999999998877777665 488999999999999998754

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.72  E-value=3.8e-17  Score=132.10  Aligned_cols=119  Identities=19%  Similarity=0.205  Sum_probs=88.7

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC--------CCCCCCCC
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG--------VDKYDIGT  168 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~--------~~~~~~g~  168 (268)
                      ++.+|+||+|.|+|++++++||+++|||++......     ..+++..+.    ..+.+.....        ..+...+.
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~~   75 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR----QMLLLFDPQESSRADANNPIPRHGAV   75 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT----EEEEEECHHHHTCCCTTCCSCCCEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC----EEEEEEecCCccCccccCCCCcCCCc
Confidence            467999999999999999999999999999876542     245555543    2344443111        11112334


Q ss_pred             CeeEEEEEE---CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          169 GFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       169 g~~hi~f~V---~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |+.|++|.|   +|+++++++|+++|+++..++. .+. +.+.++++|||||.|||++++.
T Consensus        76 g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~~-g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           76 GQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR-WPN-GSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             EECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CTT-SCEEEEEECTTCCEEEEEEGGG
T ss_pred             ceeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc-ccC-CcEEEEEECCCCCEEEEEeCCC
Confidence            678999999   8999999999999999875433 223 3588999999999999999763

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.71  E-value=1.9e-16  Score=122.33  Aligned_cols=112  Identities=13%  Similarity=0.049  Sum_probs=85.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      .....|+.|.|+|++++++||+++|||++....    .+  .+++..+.    ..+.+......    ...+..|++|.|
T Consensus         3 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~----~~~~~~~~~~~v   68 (124)
T 1xrk_A            3 KLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DD--FAGVVRDD----VTLFISAVQDQ----VVPDNTQAWVWV   68 (124)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SS--EEEEEETT----EEEEEEECSCT----TTGGGCEEEEEE
T ss_pred             cccceeEEEEcCCHHHHHHHHHHccCceEEecC----CC--EEEEEECC----EEEEEEcCCCC----CCCCceEEEEEE
Confidence            346689999999999999999999999998651    12  24454442    34555443221    112346999999


Q ss_pred             CCHHHHHHHHHHc------CC--eEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 DDVAKTVELIKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~Did~~~~~L~~~------G~--~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +|+++++++|+++      |+  ++..++.+.++|  +.++++|||||.|||++..
T Consensus        69 ~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           69 RGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             ECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            9999999999999      99  888888777665  8899999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.71  E-value=2.1e-16  Score=125.92  Aligned_cols=118  Identities=21%  Similarity=0.367  Sum_probs=87.8

Q ss_pred             cCceeeEEEEEeCCHHHHHHHH---HhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC---CCCCC-CCCC
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFY---TECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG---VDKYD-IGTG  169 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~~-~g~g  169 (268)
                      ++.+|+||.|.|+|++++++||   +++|||++....+.     ...|+. +.    ..+.+.....   ..+.. ...|
T Consensus        17 ~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~----~~l~l~~~~~~~~~~~~~~~~~g   86 (146)
T 3ct8_A           17 FQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GK----TYLVFVQTEDRFQTPTFHRKRTG   86 (146)
T ss_dssp             TTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TT----EEEEEEECCGGGSCSCCCTTSSS
T ss_pred             cccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CC----eEEEEEEcCCCcccccccccCCC
Confidence            4668999999999999999999   99999998865432     123554 32    3566655322   11112 2357


Q ss_pred             eeEEEEEEC---CHHHHHHHHHHcCCeEee-CCcccCCC-CeEEEEEECCCCCEEEEEEe
Q 024414          170 FGHFGIAVD---DVAKTVELIKAKGGKVTR-EPGPVKGG-NTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       170 ~~hi~f~V~---Did~~~~~L~~~G~~i~~-~p~~~~~G-~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ..|++|.|+   |+++++++|+++|+++.. +|...+.| +.+.+|++|||||.|||+++
T Consensus        87 ~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           87 LNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             ceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            789999999   899999999999999877 35544433 35789999999999999863

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.70  E-value=9.4e-16  Score=136.45  Aligned_cols=188  Identities=11%  Similarity=0.095  Sum_probs=118.3

Q ss_pred             ccCcCCCcccccccCcccccccccccccccccccccCh-hHHh-hhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEe
Q 024414           53 LFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESA-LEWV-KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKR  130 (268)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~  130 (268)
                      ..+.++.++.+++||..++-..............+... .... .....+|+||+|.|+|++++++||+++|||++....
T Consensus       102 ~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~  181 (309)
T 3hpy_A          102 LETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERV  181 (309)
T ss_dssp             TTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEE
T ss_pred             CCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEE
Confidence            45667888999999999986542211000000000000 0011 235789999999999999999999999999988765


Q ss_pred             cCCC-CceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHH---HHHHHHHHcCCeEeeCCcccCCCCe
Q 024414          131 DIPE-EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVA---KTVELIKAKGGKVTREPGPVKGGNT  206 (268)
Q Consensus       131 ~~~~-~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did---~~~~~L~~~G~~i~~~p~~~~~G~~  206 (268)
                      ..+. +.....|+..+...+.+  .+...      ....++.|++|.|+|++   +++++|+++|+++..+|.....+..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~  253 (309)
T 3hpy_A          182 LSPDGDSDMGIWLSCSHKVHDI--AFVEY------PEKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRG  253 (309)
T ss_dssp             ECSSSCSEEEEEEESSSSSCSE--EEEEC------SSTTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSE
T ss_pred             ecCCCCceEEEEEecCCCceeE--EEecC------CCCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCcc
Confidence            4332 23456777766543333  33221      12346899999999866   4678999999998877776655667


Q ss_pred             EEEEEECCCCCEEEEEEeCCCCCCceeEE--EEcCCHHHHHHHHH
Q 024414          207 VIAFIEDPDGYKFELLERGPTPEPLCQVM--LRVGDLDRSINFYE  249 (268)
Q Consensus       207 ~~~~~~DPdG~~iEl~e~~~~~~~l~~v~--L~v~d~~~s~~FY~  249 (268)
                      +.+|++|||||.|||+...... ..+|-.  ....+..+...|+.
T Consensus       254 ~~~y~~DPdG~~iE~~~~g~~~-d~~~~~~~w~~~~~~~~~~w~~  297 (309)
T 3hpy_A          254 CTIYAWDPSGNRFETFMGGYHP-YPDYEPLSWTYDNFAQGLDYPQ  297 (309)
T ss_dssp             EEEEEECTTSCEEEEEEECCCC-CTTSCCEEECTTTC--------
T ss_pred             EEEEEECCCCCEEEEEeCCccc-CCCcCceECChhcccceeeecC
Confidence            8899999999999999885332 223322  23345555555553

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.70  E-value=1.5e-16  Score=120.14  Aligned_cols=108  Identities=20%  Similarity=0.298  Sum_probs=81.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE-
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV-  177 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V-  177 (268)
                      ++|+||.|.|+|++++++||+++|||++....+   .  ..+++..++   ...+.+......    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            579999999999999999999999999876432   1  235555443   234555553221    124678999999 


Q ss_pred             --CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          178 --DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       178 --~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                        +|+++++++|+++|+++.. |...  + .+.++++|||||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~~--~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKHA--H-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcCC--C-cEEEEEECCCCcEEEEe
Confidence              8899999999999999753 4433  2 58899999999999996

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.70  E-value=5.5e-16  Score=121.37  Aligned_cols=118  Identities=13%  Similarity=0.125  Sum_probs=83.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD  179 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  179 (268)
                      .--+..|.|+|++++++||+++|||++....+      ..+++..+.    ..+.+...........+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT----EEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            34456799999999999999999999987643      135555542    34555553322111222344699999999


Q ss_pred             HHHHHHHHHHcC----CeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          180 VAKTVELIKAKG----GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       180 id~~~~~L~~~G----~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      +++++++|+++|    +++..++...++| .+.++++|||||.|||.+....+
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYG-QREFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTS-EEEEEEECTTSCEEEEEEECCTT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCC-cEEEEEECCCCCEEEEEEccccc
Confidence            999999999665    4556666666664 68899999999999999987644

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.69  E-value=4e-16  Score=122.86  Aligned_cols=117  Identities=21%  Similarity=0.195  Sum_probs=84.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeec-----cCC--CCCCCCCCeeE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN-----YGV--DKYDIGTGFGH  172 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~-----~~~--~~~~~g~g~~h  172 (268)
                      +++||.|.|+|++++++||+++|||++......+  .  ..++..+.  .  .+.+...     ...  .....+.+. |
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~--~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~-~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--I--FRGLDTGK--S--CIGFNAHEAYELMQLAQFSETSGIKF-L   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--T--EEEEECSS--S--EEEEECTHHHHHTTCGGGCCCBSCCE-E
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--c--eEEeecCC--E--EEEEcCccccccccccccCCCCCCeE-E
Confidence            8999999999999999999999999986433211  2  23344332  2  2333221     010  111223454 9


Q ss_pred             EEEEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          173 FGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       173 i~f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ++|.|+   |+++++++|+++|+++..++...++| .+.++++|||||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYH-WYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCc-cEEEEEECCCCCEEEEEEccc
Confidence            999999   59999999999999998877776654 688999999999999998765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.69  E-value=6e-16  Score=140.09  Aligned_cols=167  Identities=10%  Similarity=0.057  Sum_probs=114.2

Q ss_pred             ccCcCCCcccccccCcccccccccccccc-cccccccChh---HHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEE
Q 024414           53 LFGLRAAKPLRGDVNSTGVASSAGNAAQA-STSAAHESAL---EWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLR  128 (268)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~---~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~  128 (268)
                      ..+.++.++.+++||.+++-......... .......+.+   ....-...+|+||+|.|+|++++++||+++|||++..
T Consensus       102 ~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~  181 (339)
T 3lm4_A          102 FGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTE  181 (339)
T ss_dssp             TTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEE
T ss_pred             CCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEE
Confidence            44567888999999999986532111100 0000000000   0001147899999999999999999999999999987


Q ss_pred             EecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCC
Q 024414          129 KRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGN  205 (268)
Q Consensus       129 ~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~  205 (268)
                      ... +++.....|+..+...+.  +.+....    .....+++|++|.|+|   +++++++|+++|+++..+|.....+.
T Consensus       182 ~~~-~~g~~~~~~l~~~~~~~~--l~~~~~~----~~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~  254 (339)
T 3lm4_A          182 RVV-DGNVEIGAWMSSNLLGHE--VACMRDM----TGGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQ  254 (339)
T ss_dssp             EEE-ETTEEEEEEEESSSSSCS--EEEEECT----TSCCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGG
T ss_pred             EEe-cCCcEEEEEEEeCCCceE--EEEeccC----CCCCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCC
Confidence            655 333344677766654333  4444311    1233578999999999   88899999999999987777655556


Q ss_pred             eEEEEEECCCCCEEEEEEeCC
Q 024414          206 TVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       206 ~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      .+.+|++||+||.||++...+
T Consensus       255 ~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          255 SQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             EEEEEEECTTSCEEEEECCCC
T ss_pred             ceEEEEEcCCCCEEEEEEcCC
Confidence            788999999999999986543

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.69  E-value=2.2e-16  Score=125.60  Aligned_cols=120  Identities=18%  Similarity=0.155  Sum_probs=81.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEee-c------cCCCCCCCCCC
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY-N------YGVDKYDIGTG  169 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~-~------~~~~~~~~g~g  169 (268)
                      ...+|.||.|.|+|++++++||++ ||+........+.    ..++..... .  .+.+.. .      ........+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~----~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES----CACMVVSEQ-A--FVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT----EEEEEEETT-E--EEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc----eeEEeecCc-c--eEeeeccccccccccccCCCCCCCC
Confidence            467899999999999999999998 5665544332221    222222221 1  122221 0      01111123345


Q ss_pred             eeEEEEEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          170 FGHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       170 ~~hi~f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ..|++|.|+   |+++++++++++|+.+..+|.+.++  ++.+||+|||||.|||+...+
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEECT
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEECh
Confidence            569999996   4889999999999999988877654  588999999999999998665

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.68  E-value=1.7e-15  Score=136.02  Aligned_cols=180  Identities=15%  Similarity=0.089  Sum_probs=119.5

Q ss_pred             ccCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC
Q 024414           53 LFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI  132 (268)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  132 (268)
                      .++.+..++.+++||.+++........ .    .....+..-.....+|+||+|.|+|++++++|| ++|||++......
T Consensus       110 ~~~g~~~~~~DP~G~~iel~~~~~~~~-~----~~~~~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~  183 (323)
T 1f1u_A          110 KGIGDSVRVEDPLGFPYEFFYETEHVE-R----LTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKD  183 (323)
T ss_dssp             TTBCSEEEEECTTSCEEEEECCBCCCC-C----CTTCGGGCCTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEEC
T ss_pred             CCcceEEEEECCCCCEEEEEEeccccc-c----cccccccCCCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEc
Confidence            456677889999999999865422111 0    000000000124789999999999999999999 9999998876554


Q ss_pred             CCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH---HHHHHHHcCC--eEeeCCcccCCCCeE
Q 024414          133 PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK---TVELIKAKGG--KVTREPGPVKGGNTV  207 (268)
Q Consensus       133 ~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~---~~~~L~~~G~--~i~~~p~~~~~G~~~  207 (268)
                      +.+.....|+..+...+.  +.+....       +.+++|++|.|+|+++   ++++|+++|+  ++..++.....+..+
T Consensus       184 ~~g~~~~~f~~~~~~~~~--~~~~~~~-------~~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~  254 (323)
T 1f1u_A          184 SDGVTYAAWMHRKQTVHD--TALTGGN-------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAF  254 (323)
T ss_dssp             TTCCEEEEEEESSSSSCS--EEEEESS-------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCE
T ss_pred             CCCcEEEEEEEcCCCccc--EEEeCCC-------CCCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcE
Confidence            444444567766543333  3333211       2388999999999988   9999999999  887655555445567


Q ss_pred             EEEEECCCCCEEEEEEeCCCCCCcee--EEEEcCCHHHHHHH
Q 024414          208 IAFIEDPDGYKFELLERGPTPEPLCQ--VMLRVGDLDRSINF  247 (268)
Q Consensus       208 ~~~~~DPdG~~iEl~e~~~~~~~l~~--v~L~v~d~~~s~~F  247 (268)
                      .+|++|||||.||++.........+|  ..-...+.++...|
T Consensus       255 ~~y~~DPdG~~iE~~~~~~~~~~~~~~~~~w~~~~~~~~~~w  296 (323)
T 1f1u_A          255 YLYILDPDGHRIEIYTQDYYTGDPDNPTITWDVHDNQRRDWW  296 (323)
T ss_dssp             EEEEECTTCCEEEEEECCCCCCSTTCCCEEEETTCGGGTCTT
T ss_pred             EEEEECCCCCEEEEEeCCEEeeCCCCCCeEEEcCCccccccc
Confidence            89999999999999976533212223  33344555544433

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.68  E-value=1.3e-16  Score=145.67  Aligned_cols=153  Identities=14%  Similarity=0.117  Sum_probs=112.7

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCC----CCCCCCeeEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDK----YDIGTGFGHF  173 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~----~~~g~g~~hi  173 (268)
                      +.+|+||.+.|+|++++.+|| ++|||++..+....    ....+..++    +.+.+........    ..++.++.|+
T Consensus        10 i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~----~~l~l~~~~~~~~~~~~~~~g~gv~~i   80 (357)
T 1cjx_A           10 LMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGE----INLILNNEPNSIASYFAAEHGPSVCGM   80 (357)
T ss_dssp             EEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETT----EEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCC----EEEEEECCCCchhhhhhhhcCCeEEEE
Confidence            679999999999999999999 79999998764321    133444442    3455543211100    1245789999


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC------------------C-----CC
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------P-----EP  230 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~------------------~-----~~  230 (268)
                      +|.|+|+++++++++++|+++..++..  .|......+++|+|..++|+++...                  +     .+
T Consensus        81 af~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~  158 (357)
T 1cjx_A           81 AFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAGLKV  158 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTTSEEE
T ss_pred             EEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCCCeeE
Confidence            999999999999999999988665532  2333456677888888888765421                  1     24


Q ss_pred             ceeEEEEcC--CHHHHHHHHHHhcCCeEeeeec
Q 024414          231 LCQVMLRVG--DLDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       231 l~~v~L~v~--d~~~s~~FY~~vlG~~~~~~~~  261 (268)
                      ++|+.+.|.  |++++.+||+++|||+..+..+
T Consensus       159 idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~  191 (357)
T 1cjx_A          159 IDHLTHNVYRGRMVYWANFYEKLFNFREARYFD  191 (357)
T ss_dssp             EEEECEECCTTHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             ECceEEeechhhHHHHHHHHHHhhCCceeeEEE
Confidence            789999999  9999999999999999876644

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.68  E-value=8.5e-17  Score=126.34  Aligned_cols=117  Identities=21%  Similarity=0.199  Sum_probs=84.5

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEe-----ec---cCCCCCCCCCC
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELT-----YN---YGVDKYDIGTG  169 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~-----~~---~~~~~~~~g~g  169 (268)
                      .++++|+.|.|+|++++++||+++|||++....+    .  .+.+..+     +.+...     ..   ........+.+
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~~~   74 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----S--FVLFETG-----FAIHEGRSLEETIWRTSSDAQEAYGRR   74 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----S--EEEETTS-----CEEEEHHHHHHHHHSCCC--CCCSCCS
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----C--cEEEecc-----ceeccCchhhhhccccCCccccccCCC
Confidence            5689999999999999999999999999876432    1  1223211     223211     10   11111233457


Q ss_pred             eeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          170 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      ..|++|.|+|+++++++|++ |+++..++.+.++| .+.++++|||||.|||++..+.
T Consensus        75 ~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  130 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESLSQ  130 (141)
T ss_dssp             SCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC--
T ss_pred             ceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecchH
Confidence            78999999999999999999 99988877777665 5789999999999999997653

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.67  E-value=1.1e-15  Score=135.58  Aligned_cols=187  Identities=13%  Similarity=0.146  Sum_probs=122.4

Q ss_pred             ccCcCCCcccccccCcccccccccccc----cccccc-cccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEE
Q 024414           53 LFGLRAAKPLRGDVNSTGVASSAGNAA----QASTSA-AHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLL  127 (268)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~  127 (268)
                      ..+.+..++.+++||..++........    ....+. ...+.   ...+..+|+||.|.|+|++++++||+++|||++.
T Consensus       101 ~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~  177 (307)
T 1mpy_A          101 NSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDL---KGMAAVRFDHALMYGDELPATYDLFTKVLGFYLA  177 (307)
T ss_dssp             TTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCC---CTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             CCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccC---CCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeE
Confidence            456677888999999999876422111    000000 00000   0125789999999999999999999999999988


Q ss_pred             EEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCC-eeEEEEEEC---CHHHHHHHHHHcCCeEeeCCcccCC
Q 024414          128 RKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG-FGHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKG  203 (268)
Q Consensus       128 ~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g-~~hi~f~V~---Did~~~~~L~~~G~~i~~~p~~~~~  203 (268)
                      .......+.....|+..+.....  +.+...      . ..| +.|++|.|+   |+++++++|+++|+++..+|...+.
T Consensus       178 ~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~------~-~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~  248 (307)
T 1mpy_A          178 EQVLDENGTRVAQFLSLSTKAHD--VAFIHH------P-EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGL  248 (307)
T ss_dssp             EEEECTTCCEEEEEEESSSBSCS--EEEEEC------S-SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSS
T ss_pred             eeeecCCCcEEEEEEEcCCCcee--EEEecC------C-CCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCC
Confidence            65432222122345555433333  333321      1 134 789999999   5677889999999998777666554


Q ss_pred             CCeEEEEEECCCCCEEEEEEeCCCCCCcee--EEEEcCCHHHHHHHHHHhc
Q 024414          204 GNTVIAFIEDPDGYKFELLERGPTPEPLCQ--VMLRVGDLDRSINFYEQAF  252 (268)
Q Consensus       204 G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~--v~L~v~d~~~s~~FY~~vl  252 (268)
                      +..+.+|++|||||.|||++..... ...|  ......+.++...||..-+
T Consensus       249 ~~~~~~~~~DPdG~~iel~~~~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~  298 (307)
T 1mpy_A          249 THGKTIYFFDPSGNRNEVFCGGDYN-YPDHKPVTWTTDQLGKAIFYHDRIL  298 (307)
T ss_dssp             TTCEEEEEECTTSCEEEEEECCCBC-CTTSCCEEEEGGGHHHHHCTTTCSC
T ss_pred             CCceEEEEECCCCcEEEEEeccccc-CCCCCCeEeecccccccceecCccc
Confidence            4457899999999999999975422 1122  3446678888888887543

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.67  E-value=2e-15  Score=116.70  Aligned_cols=111  Identities=23%  Similarity=0.290  Sum_probs=83.8

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCH
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV  180 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Di  180 (268)
                      ..|+.|.|+|++++++||++ |||++....    ..  .+++..++    ..+.+......   ....+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~---~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD----AG--WMILQRGD----LMLEFFAHPGL---DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC----SS--EEEEEETT----EEEEEEECTTC---CGGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC----CC--EEEEEeCC----EEEEEEeCCCC---CCCCcceEEEEEECCH
Confidence            46899999999999999998 999988651    12  34455542    34555442221   1124667999999999


Q ss_pred             HHHHHHHHHcCCeE-------eeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          181 AKTVELIKAKGGKV-------TREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       181 d~~~~~L~~~G~~i-------~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ++++++++++|+++       ..++.+.++| .+.++++|||||.|||++...
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcc-cEEEEEECCCCCEEEEecchh
Confidence            99999999999984       6666666665 478999999999999998765

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.67  E-value=4.8e-16  Score=119.63  Aligned_cols=108  Identities=15%  Similarity=0.079  Sum_probs=81.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCH
Q 024414          101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDV  180 (268)
Q Consensus       101 l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Di  180 (268)
                      -.|+.|.|+|++++++||+++|||++....    .+  .+++..+.    ..+.+......   ..+ +..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~---~~~-~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGD----RD--FAGVRRGD----IRLHISRTEHQ---IVA-DNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEEC----SS--EEEEEETT----EEEEEEECSCH---HHH-TTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCC----CC--EEEEEECC----EEEEEEcCCCC---CCC-CceEEEEEECCH
Confidence            346779999999999999999999988651    11  34455442    34555442211   111 235999999999


Q ss_pred             HHHHHHHHHc------CC--eEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          181 AKTVELIKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       181 d~~~~~L~~~------G~--~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ++++++++++      |+  ++..++...++|  +.++++|||||.|||+++
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETTE--EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCCC--cEEEEECCCCCEEEEecC
Confidence            9999999999      99  888777777665  789999999999999985

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.65  E-value=2.7e-15  Score=133.96  Aligned_cols=152  Identities=19%  Similarity=0.248  Sum_probs=110.5

Q ss_pred             cccCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEec
Q 024414           52 QLFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRD  131 (268)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~  131 (268)
                      ..+|.+..++.+++||..++.........   ....   + . ..+..+|+||+|.|+|++++++||+++|||++.....
T Consensus       101 ~~~~~~~~~~~DPdG~~iel~~~~~~~~~---~~~~---~-~-~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~  172 (310)
T 3b59_A          101 TPGGGYGFRFFSPDGLLFEVSSDVAKGAK---RDLA---R-W-EGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG  172 (310)
T ss_dssp             STTCCEEEEEECTTSCEEEEEECCCCCCC---CCCC---T-T-CCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET
T ss_pred             ccCCceEEEEECCCCCEEEEEEcccccCC---CccC---C-C-CCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC
Confidence            34567777899999999998653221110   0000   0 0 1357899999999999999999999999999886542


Q ss_pred             CCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHH---HHHHHHcCCeEeeCCcccCCCCeEE
Q 024414          132 IPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKT---VELIKAKGGKVTREPGPVKGGNTVI  208 (268)
Q Consensus       132 ~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~---~~~L~~~G~~i~~~p~~~~~G~~~~  208 (268)
                      .     ...|+..+...+.  +.+...      .  .|+.|++|.|+|++++   +++|+++|+++..++.....|..+.
T Consensus       173 ~-----~~~fl~~~~~~~~--l~l~~~------~--~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~  237 (310)
T 3b59_A          173 D-----FMCFLRCNSAHHR--IAILPG------P--PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTF  237 (310)
T ss_dssp             T-----TEEEEESSSBSCS--EEEEES------S--SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEE
T ss_pred             C-----eEEEEecCCCcce--EEEECC------C--CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEE
Confidence            1     2566666543333  333331      1  5789999999998777   9999999999887766655556688


Q ss_pred             EEEECCCCCEEEEEEeCC
Q 024414          209 AFIEDPDGYKFELLERGP  226 (268)
Q Consensus       209 ~~~~DPdG~~iEl~e~~~  226 (268)
                      +|++|||||.||+++...
T Consensus       238 ~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          238 SYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             EEEECTTSCEEEEEECCC
T ss_pred             EEEECCCCCEEEEEeCcc
Confidence            999999999999998764

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.64  E-value=3.9e-15  Score=131.69  Aligned_cols=160  Identities=16%  Similarity=0.227  Sum_probs=108.8

Q ss_pred             cCcCCCcccccccCccccccc-ccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC
Q 024414           54 FGLRAAKPLRGDVNSTGVASS-AGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI  132 (268)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  132 (268)
                      .+.++.++.+++||..++... ......   +.. .+...+. ....+|+||+|.|+|++++++||+++|||++......
T Consensus       100 ~~~~~~~~~DPdG~~iel~~~~~~~~~~---~~~-~~~~~~~-~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~  174 (300)
T 2zyq_A          100 RVDEMIRFADPSGNCLEVFHGTALEHRR---VVS-PYGHRFV-TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRL  174 (300)
T ss_dssp             TCSEEEEEECTTCCEEEEEECCCCCCSC---CCC-TTCCCBC-CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEE
T ss_pred             cceEEEEEECCCCCEEEEEEcCCcCCCC---Ccc-CCCcccc-cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecc
Confidence            456677899999999998653 111110   000 0001111 2467899999999999999999999999998754322


Q ss_pred             C--------CC-ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH---HHHHHHHcCCeEeeCCcc
Q 024414          133 P--------EE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGP  200 (268)
Q Consensus       133 ~--------~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~---~~~~L~~~G~~i~~~p~~  200 (268)
                      +        ++ .....|+..+.....  +.+...      ....++.|++|.|+|+++   ++++|+++|+++..+|..
T Consensus       175 ~~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~  246 (300)
T 2zyq_A          175 PPQMVGRPADGPPAWLRFFGCNPRHHS--LAFLPM------PTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGR  246 (300)
T ss_dssp             CGGGGTCCTTSCCEEEEEEESSSBSCS--EEEESS------CCSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cccccccCCCCCceEEEEEEECCCccE--EEEecC------CCCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccc
Confidence            2        11 224556655432222  344331      123578899999999665   599999999999877666


Q ss_pred             cCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          201 VKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       201 ~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      .+.+..+.+|++|||||.|||++...
T Consensus       247 ~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (300)
T 2zyq_A          247 HVNDLMLSFYMKTPGGFDIEFGCEGR  272 (300)
T ss_dssp             ESSSCCEEEEEECTTSSEEEEEECCC
T ss_pred             cCCCCeEEEEEECCCCCEEEEEeCCe
Confidence            55555688999999999999998653

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.64  E-value=5.3e-15  Score=133.96  Aligned_cols=160  Identities=10%  Similarity=-0.000  Sum_probs=108.1

Q ss_pred             ccccCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEe
Q 024414           51 SQLFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKR  130 (268)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~  130 (268)
                      ...+|.++.++.+++||.+++........   .+-...+.|  ....+.+|+||+|.|+|++++.+||+++|||++....
T Consensus       109 ~~~~g~~~~~f~DPdGn~iEl~~~~~~~~---~~~~~~~v~--~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~  183 (335)
T 3oaj_A          109 IERFGEQYVEFDDPHGLHLEIVEREEGEA---NTWTFGEVT--PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKE  183 (335)
T ss_dssp             EEETTEEEEEEECTTSCEEEEEECSCSCC---CCCCBTTBC--TTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEE
T ss_pred             eccCCcEEEEEECCCCCEEEEEEeCCCCc---CCCcCCCCC--hhhhhccccceEEEECCHHHHHHHHHHHhCCEEeecc
Confidence            45677789999999999999865422110   000011111  1246789999999999999999999999999998764


Q ss_pred             cCCCCceeEEEEeeCCCCceEEEEEeeccCCCCC-CCCCCeeEEEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCe
Q 024414          131 DIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKY-DIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNT  206 (268)
Q Consensus       131 ~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~-~~g~g~~hi~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~  206 (268)
                      +.      .+.+..+.....  +.+......... ....++.|+||.|+|   ++++.++|+++|+.+... .+.  +..
T Consensus       184 ~~------~~~~~~g~~~~~--l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~-~~r--~~~  252 (335)
T 3oaj_A          184 GD------FVRYRSAGDIGN--VIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPV-RDR--NYF  252 (335)
T ss_dssp             TT------EEEEECSSSSSC--EEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCC-EEC--SSS
T ss_pred             CC------EEEEEeCCCCcE--EEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCcccc-ccC--CcE
Confidence            31      233333332233  334332221111 223468899999998   667999999999986432 222  345


Q ss_pred             EEEEEECCCCCEEEEEEeCC
Q 024414          207 VIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       207 ~~~~~~DPdG~~iEl~e~~~  226 (268)
                      +.+||+||+||.|||....|
T Consensus       253 ~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          253 NAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             EEEEEECTTSCEEEEEESCS
T ss_pred             EEEEEECCCCcEEEEEeCCC
Confidence            78999999999999999854

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.64  E-value=2.9e-15  Score=119.11  Aligned_cols=117  Identities=21%  Similarity=0.214  Sum_probs=79.8

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCC--CCC------
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI--GTG------  169 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~--g~g------  169 (268)
                      +.++.|+.|.|+|++++++||+++|||++.......+ ++  .++  +   .  .+.+...........  +.+      
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~--~~~--g---~--~l~l~~~~~~~~~~~~~~~~~~~g~~   88 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GF--GDY--G---C--VFDYPSEVAVAHLTPFRGFHLFKGEP   88 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SC--EEE--E---E--EESSCTTTTSCC--CCCSEEEEESCC
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-Cc--cEE--c---c--EEEEeccCCCcccccccccceeeccC
Confidence            5689999999999999999999999999864211111 11  122  2   1  133311110000000  111      


Q ss_pred             -eeEEEE-EECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          170 -FGHFGI-AVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       170 -~~hi~f-~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                       .++.+| .|+|+++++++|+++|+++..++...++| .+.++++|||||.|||+++.
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG-ARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCc-cEEEEEECCCCCEEEEeeec
Confidence             112265 99999999999999999988888777664 68899999999999999875

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.63  E-value=7.8e-15  Score=116.04  Aligned_cols=115  Identities=15%  Similarity=0.199  Sum_probs=80.1

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeecc---C-----CCCCCCCCCeeEEE
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY---G-----VDKYDIGTGFGHFG  174 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~---~-----~~~~~~g~g~~hi~  174 (268)
                      .+.|.|+|++++++||+++|||++......+  .  .+++..+.    ..+.+....   .     ......+.|+ +++
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~--~~~l~~g~----~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~   78 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERPDE--E--FVYLTLDG----VDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQ   78 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--T--EEEEEETT----EEEEEEEC-----------CCSSTTTTE-EEE
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecCCC--C--EEEEEcCC----eEEEEEeccCCCcccccCccccCCCCce-EEE
Confidence            4779999999999999999999987533221  2  34555542    234444321   0     0111233465 499


Q ss_pred             EEECCHHHHHHHHHH-cCCeEeeCCcccC------CCCeEEEEEECCCCCEEEEEEeCC
Q 024414          175 IAVDDVAKTVELIKA-KGGKVTREPGPVK------GGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       175 f~V~Did~~~~~L~~-~G~~i~~~p~~~~------~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      |.|+|+++++++|++ +|+++..++...+      .++.+.++++|||||.|||++...
T Consensus        79 ~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           79 WDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             EECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            999999999999999 9999887766421      223578999999999999998754

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.62  E-value=1.2e-14  Score=131.23  Aligned_cols=161  Identities=16%  Similarity=0.109  Sum_probs=105.9

Q ss_pred             ccCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC
Q 024414           53 LFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI  132 (268)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  132 (268)
                      .+|.++.++.+++||..++............+......+  ...++.+|+||+|.|+|++++++||+++|||++....+ 
T Consensus       135 ~~G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~--~~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~-  211 (338)
T 1zsw_A          135 YANRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVP--AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND-  211 (338)
T ss_dssp             ETTEEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSC--GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS-
T ss_pred             cCCcEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCC--ccccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC-
Confidence            577778889999999999865422111000000000011  12357899999999999999999999999999886543 


Q ss_pred             CCCceeEEEEeeCCCCc-eEEEEEeeccCCCCCCCCCCeeEEEEEEC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEE
Q 024414          133 PEEKYTNAFLGYGPEDS-HFVIELTYNYGVDKYDIGTGFGHFGIAVD---DVAKTVELIKAKGGKVTREPGPVKGGNTVI  208 (268)
Q Consensus       133 ~~~~~~~~~l~~g~~~~-~~~lel~~~~~~~~~~~g~g~~hi~f~V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~  208 (268)
                         ++  +.+..++.+. ...+.+... .........++.|++|.|+   |+++++++|+++|+++. ++...  ++.+.
T Consensus       212 ---~~--~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~--~~~~~  282 (338)
T 1zsw_A          212 ---QE--AIFQSIKGEAFGEIVVKYLD-GPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDR--FYFKS  282 (338)
T ss_dssp             ---SE--EEEESSTTCSTTCEEEEECC-SSBCBCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEEC--SSEEE
T ss_pred             ---Ce--EEEEecCCCCceEEEEeccC-CCCCCCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeec--CceEE
Confidence               11  3333432111 112333221 1111122246889999999   69999999999999985 44443  34688


Q ss_pred             EEEECCCCCEEEEEEeC
Q 024414          209 AFIEDPDGYKFELLERG  225 (268)
Q Consensus       209 ~~~~DPdG~~iEl~e~~  225 (268)
                      +||+|||||.|||++..
T Consensus       283 ~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          283 LYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEECTTCCEEEEEEEE
T ss_pred             EEEECCCCCEEEEEEcC
Confidence            99999999999999875

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.60  E-value=1.1e-14  Score=128.16  Aligned_cols=162  Identities=17%  Similarity=0.166  Sum_probs=107.8

Q ss_pred             cCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC
Q 024414           54 FGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP  133 (268)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~  133 (268)
                      .+.++.++.+++||.+++......... .....+.+...+. ....+|+||+|.|+|++++++||+++|||++......+
T Consensus        98 ~~~~~~~~~DPdG~~iel~~~~~~~~~-~~~~~~~~~~~~~-~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~  175 (292)
T 1kw3_B           98 KVMGLLCLQDPFGLPLEIYYGPAEIFH-EPFLPSAPVSGFV-TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQ  175 (292)
T ss_dssp             TCSEEEEEECTTSCEEEEEECCCBCTT-SCCCCSSSCCCBC-CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred             CceEEEEEECCCCCEEEEEECcccccc-CCCCCCCCccccc-cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecc
Confidence            455677889999999998654221100 0000111111111 34678999999999999999999999999987543211


Q ss_pred             --CC-ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH---HHHHHHHcCCeEeeCCcccCCCCeE
Q 024414          134 --EE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNTV  207 (268)
Q Consensus       134 --~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~---~~~~L~~~G~~i~~~p~~~~~G~~~  207 (268)
                        .+ .....|+..+.....  +.+....      ...+++|++|.|+|+++   ++++|+ +|+++..+|...+.+..+
T Consensus       176 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~  246 (292)
T 1kw3_B          176 MGPETSVPAHFLHCNGRHHT--IALAAFP------IPKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTL  246 (292)
T ss_dssp             EETTEEEEEEEEESSSBSCS--EEEECCS------CSSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCE
T ss_pred             cCCCccceEEEEEECCCcce--EEEecCC------CCCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeE
Confidence              11 123456665432222  3333211      13578899999998665   677999 999988777766655567


Q ss_pred             EEEEECCCCC-EEEEEEeCC
Q 024414          208 IAFIEDPDGY-KFELLERGP  226 (268)
Q Consensus       208 ~~~~~DPdG~-~iEl~e~~~  226 (268)
                      .+|++||||| .|||++...
T Consensus       247 ~~y~~DPdG~~~iEl~~~~~  266 (292)
T 1kw3_B          247 SFYADTPSPMIEVEFGWGPR  266 (292)
T ss_dssp             EEEEECSSTTCEEEEEECCC
T ss_pred             EEEEECCCCCeeEEEEECCE
Confidence            8899999999 999998653

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.60  E-value=1.5e-14  Score=127.62  Aligned_cols=161  Identities=16%  Similarity=0.157  Sum_probs=109.0

Q ss_pred             cCcCCCcccccccCccccccccccc-ccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC
Q 024414           54 FGLRAAKPLRGDVNSTGVASSAGNA-AQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI  132 (268)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  132 (268)
                      .+.++.++.+++||.+++....... ...  .....+...+. ....+|+||.|.|+|++++++||+++|||++......
T Consensus        98 ~~~~~~~~~DPdG~~iel~~~~~~~~~~~--~~~~~~~~~~~-~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~  174 (297)
T 1lgt_A           98 GVTGLITFADPFGLPLEIYYGASEVFEKP--FLPGAAVSGFL-TGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDM  174 (297)
T ss_dssp             TCSEEEEEECTTSCEEEEEECCCBCTTSC--CCCSSSCSCBC-CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             CceeEEEEECCCCCEEEEEECccccccCC--ccCCCcccccc-cCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEec
Confidence            4556778999999999986542211 000  00011111111 2357899999999999999999999999998754321


Q ss_pred             C---CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHH---HHHHHcCCeEeeCCcccCCCCe
Q 024414          133 P---EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTV---ELIKAKGGKVTREPGPVKGGNT  206 (268)
Q Consensus       133 ~---~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~---~~L~~~G~~i~~~p~~~~~G~~  206 (268)
                      +   +......|+..+.....  +.+...      ....+..|++|.|+|++++.   ++ +++|+++..+|...+.|..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~--l~l~~~------~~~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~  245 (297)
T 1lgt_A          175 KMGPDVTVPAYFLHCNERHHT--LAIAAF------PLPKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHM  245 (297)
T ss_dssp             EEETTEEEEEEEEESSSBSCS--EEEECC------CCSSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCC
T ss_pred             cCCCCccceEEEEEeCCCcce--EEEEcC------CCCCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCc
Confidence            1   11123456655432222  344432      12357889999999988776   88 9999999887777666666


Q ss_pred             EEEEEECCCCCEEEEEEeCC
Q 024414          207 VIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       207 ~~~~~~DPdG~~iEl~e~~~  226 (268)
                      +.+|++|||||.|||++...
T Consensus       246 ~~~~~~DPdG~~iel~~~~~  265 (297)
T 1lgt_A          246 VSFYASTPSGVEVEYGWSAR  265 (297)
T ss_dssp             EEEEEECTTSCEEEEEECCC
T ss_pred             EEEEEECCCCcEEEEecCCE
Confidence            77999999999999998763

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.59  E-value=8e-15  Score=130.15  Aligned_cols=161  Identities=14%  Similarity=0.187  Sum_probs=105.3

Q ss_pred             CcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC-
Q 024414           55 GLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-  133 (268)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-  133 (268)
                      +.++.++.+++||..++......... .......+.+.-+.....+|+||.|.|+|++++++|| ++|||++......+ 
T Consensus       102 ~~~~~~~~DPdG~~iel~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~  179 (305)
T 2wl9_A          102 VLGLVKLHDPGGNPTEIFYGPQVDTS-SPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFAL  179 (305)
T ss_dssp             EEEEEEEECTTCCEEEEEEEECBCTT-SCCCCSSCCSSCBCCTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEEC
T ss_pred             cEEEEEEECCCCCEEEEEECCCccCC-CCcCCCCCcccceecCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEeccc
Confidence            34567888999999998653111000 0000001100001134679999999999999999999 99999986432111 


Q ss_pred             -CC-ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEE
Q 024414          134 -EE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVI  208 (268)
Q Consensus       134 -~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~  208 (268)
                       .+ .....|+..+...+.  +.+...      ....++.|++|.|+|   +++++++|+++|+++..++...+.+..+.
T Consensus       180 ~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~  251 (305)
T 2wl9_A          180 PNGAVGTPVFMHCNDRHHS--LAFGVG------PMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALT  251 (305)
T ss_dssp             TTSCEECCEEEESSSSSCS--EEECCS------CCSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEE
T ss_pred             CCCccceEEEEEcCCCceE--EEEecC------CCCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEE
Confidence             11 223456655543332  333221      123578899999998   66788899999999987766655555678


Q ss_pred             EEEECCCCCEEEEEEeC
Q 024414          209 AFIEDPDGYKFELLERG  225 (268)
Q Consensus       209 ~~~~DPdG~~iEl~e~~  225 (268)
                      +|++|||||.|||++..
T Consensus       252 ~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          252 FYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEECTTSSEEEEEECC
T ss_pred             EEEECCCCCEEEEEeCC
Confidence            99999999999999865

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.58  E-value=4.3e-14  Score=127.55  Aligned_cols=141  Identities=18%  Similarity=0.322  Sum_probs=103.3

Q ss_pred             CCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCce
Q 024414           58 AAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY  137 (268)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~  137 (268)
                      ..++.+++||.+++-....                   .....+.||.|.|+|++++++||+++|||++.......+   
T Consensus       136 ~~~~~DPdG~~iel~~~~~-------------------~~~~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~---  193 (330)
T 3zi1_A          136 VFETEAPGGYKFYLQNRSL-------------------PQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ---  193 (330)
T ss_dssp             EEEEECTTSCEEEEESSCC-------------------TTSCSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT---
T ss_pred             eEEEECCCCCEEEEEecCC-------------------CCCCceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc---
Confidence            4566778888887654310                   012357899999999999999999999999987765332   


Q ss_pred             eEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC--CHHHHHHHHHHcCCeEeeCCccc--C-CCCeEEEEEE
Q 024414          138 TNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD--DVAKTVELIKAKGGKVTREPGPV--K-GGNTVIAFIE  212 (268)
Q Consensus       138 ~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~--Did~~~~~L~~~G~~i~~~p~~~--~-~G~~~~~~~~  212 (268)
                       .+++..++.  .+.+++.....  ....+.++.|++|.|+  |+++++++|+++|+++..++.+.  + .++.+.+||+
T Consensus       194 -~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~  268 (330)
T 3zi1_A          194 -RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILA  268 (330)
T ss_dssp             -EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEE
T ss_pred             -EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEE
Confidence             466776654  34466554322  2234457789999995  79999999999999987766543  1 1245889999


Q ss_pred             CCCCCEEEEEEeC
Q 024414          213 DPDGYKFELLERG  225 (268)
Q Consensus       213 DPdG~~iEl~e~~  225 (268)
                      |||||.|||++..
T Consensus       269 DPdG~~iEl~~~~  281 (330)
T 3zi1_A          269 DPDGHEICFVGDE  281 (330)
T ss_dssp             CTTCCEEEEEEHH
T ss_pred             CCCCCEEEEEEec
Confidence            9999999999874

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.58  E-value=4.8e-14  Score=124.45  Aligned_cols=150  Identities=19%  Similarity=0.207  Sum_probs=101.9

Q ss_pred             cCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC
Q 024414           56 LRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE  135 (268)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~  135 (268)
                      .+...+.+++||.+++-.......     ...       ......+.|+.|.|+|++++++||+++|||++......+..
T Consensus       132 g~~~~~~DP~G~~i~l~~~~~~~~-----~~~-------~~~~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~  199 (282)
T 3oxh_A          132 GRMSFITDPTGAAVGLWQANRHIG-----ATL-------VNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ  199 (282)
T ss_dssp             EEEEEEECTTCCEEEEEEESSCCS-----CSB-------CSSTTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC------
T ss_pred             eEEEEEECCCCCEEEEEEccccCC-----ccc-------cCCCCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc
Confidence            356788899999998765322111     000       11235688899999999999999999999998754311222


Q ss_pred             ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCC
Q 024414          136 KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD  215 (268)
Q Consensus       136 ~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPd  215 (268)
                      .+  +.+..+..  .+ ..+....    .....+.+|++|.|+|+++++++++++|+++..+|.+.++| .+.++++|||
T Consensus       200 ~~--~~~~~~~~--~~-~~~~~~~----~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~~-~~~~~~~DPd  269 (282)
T 3oxh_A          200 NY--RVLKAGDA--EV-GGCMEPP----MPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAVLSDPQ  269 (282)
T ss_dssp             -C--EEEEETTE--EE-EEEECCS----STTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTT-EEEEEEECTT
T ss_pred             ce--EEEEcCCc--cE-eeecCCC----CCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCCC-eEEEEEECCC
Confidence            22  33333321  11 2222211    12234667999999999999999999999998888877764 6889999999


Q ss_pred             CCEEEEEEeCCC
Q 024414          216 GYKFELLERGPT  227 (268)
Q Consensus       216 G~~iEl~e~~~~  227 (268)
                      ||.|+|+++.+.
T Consensus       270 Gn~~~l~~~~~~  281 (282)
T 3oxh_A          270 GAIFSVLKAAPQ  281 (282)
T ss_dssp             SCEEEEEEEC--
T ss_pred             CCEEEEEecCCC
Confidence            999999998753

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.57  E-value=1.7e-14  Score=128.00  Aligned_cols=161  Identities=16%  Similarity=0.170  Sum_probs=105.4

Q ss_pred             cCcCCCcccccccCcccccccccccccccccccccChhH-HhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC
Q 024414           54 FGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALE-WVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI  132 (268)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  132 (268)
                      .+.++.++.+++||..++......... .......+.+. |. ....+|+||.|.|+|++++++|| ++|||++......
T Consensus       104 ~~~~~~~~~DPdG~~iel~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~  180 (302)
T 2ehz_A          104 MVLGLMKTEDPGGNPTEIFWGPRIDMS-NPFHPGRPLHGKFV-TGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRI  180 (302)
T ss_dssp             TEEEEEEEECTTSCEEEEEEEECBCTT-SCCCCSSCCSSCBC-CGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEE
T ss_pred             cceEEEEEECCCCCEEEEEECCCccCC-CCccCCCCccccee-cCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEec
Confidence            345677889999999998653111000 00000011111 11 23568999999999999999999 9999987643221


Q ss_pred             C--CC-ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH---HHHHHHHcCCeEeeCCcccCCCCe
Q 024414          133 P--EE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK---TVELIKAKGGKVTREPGPVKGGNT  206 (268)
Q Consensus       133 ~--~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~---~~~~L~~~G~~i~~~p~~~~~G~~  206 (268)
                      +  .+ .....|+..+.....  +.+...      ....++.|++|.|+|+++   ++++|+++|+++..+|...+.+..
T Consensus       181 ~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~  252 (302)
T 2ehz_A          181 PLPNGMTAELSFMHCNARDHS--IAFGAM------PAAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKA  252 (302)
T ss_dssp             ECTTSCEEEEEEEBSSSBSCS--EEECSC------CCSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCC
T ss_pred             cCCCCcceEEEEEEeCCCCcE--EEEecC------CCCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCc
Confidence            1  11 223456655432222  333221      113578899999998764   677999999999877766655556


Q ss_pred             EEEEEECCCCCEEEEEEeC
Q 024414          207 VIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       207 ~~~~~~DPdG~~iEl~e~~  225 (268)
                      +.+|++|||||.|||+...
T Consensus       253 ~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          253 LTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEEEECTTSSEEEEEECC
T ss_pred             eEEEEECCCCcEEEEEECc
Confidence            7899999999999999764

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.52  E-value=2e-13  Score=111.32  Aligned_cols=118  Identities=15%  Similarity=0.149  Sum_probs=78.4

Q ss_pred             eeEEEEEeCC--HHHHHHHHHhhcCCEEEEEe-------cCCCCceeEEEEeeCCCCceEEEEEeeccCC-C-CCCC--C
Q 024414          101 MLHVVYRVGD--LDRTIKFYTECLGMKLLRKR-------DIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-D-KYDI--G  167 (268)
Q Consensus       101 l~HV~l~V~D--le~a~~FY~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-~-~~~~--g  167 (268)
                      --++.|.|+|  +++|++||+++|||++....       ....+.+..+.+..+.  .  .+.+...... . +...  +
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g--~--~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG--S--SFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT--E--EEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECC--e--EEEEeCCCcccCCccccCCC
Confidence            3566799999  99999999999999987533       1111222233344432  2  2333332111 0 1111  2


Q ss_pred             CCeeEEEEEECCHHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          168 TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      .+ .|++|.|+|+++++++|+++|++ ..++.+.  ++  .+.++|+||+||.|+|++...
T Consensus       101 ~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          101 SG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             CC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             Cc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            34 38999999999999999999999 8888877  66  478999999999999998654

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.51  E-value=1.1e-12  Score=104.95  Aligned_cols=124  Identities=16%  Similarity=0.147  Sum_probs=81.5

Q ss_pred             EEEEEeC-CHHHHHHHHHhhcCCEEEEEecCCC------------CceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCC
Q 024414          103 HVVYRVG-DLDRTIKFYTECLGMKLLRKRDIPE------------EKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG  169 (268)
Q Consensus       103 HV~l~V~-Dle~a~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  169 (268)
                      +..|.|. |+++|++||+++||+++.......+            +....+.+..+.  .  .+.+.............|
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~--~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS--F--ALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT--E--EEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECC--E--EEEEEcCCCccCCCCCCc
Confidence            3778898 9999999999999999875421110            222223344432  2  233332211001112334


Q ss_pred             eeEEEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCcee
Q 024414          170 FGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQ  233 (268)
Q Consensus       170 ~~hi~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~  233 (268)
                       .+++|.|+|   +++++++|+ +|+++..++.+.++| .+.++++||+|+.|+|++.....+.-.|
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG-~r~~~v~Dp~G~~w~l~~~~~~~~~~~~  145 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQDREGGSHH  145 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESCC-------
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcc-cceEEEECCCCCEEEEEEecccCCCccc
Confidence             589999999   889999985 899999999998876 5889999999999999998776655443

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.51  E-value=9.5e-14  Score=126.30  Aligned_cols=140  Identities=17%  Similarity=0.286  Sum_probs=98.4

Q ss_pred             cCceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEec--CCCCceeEEEEeeCCCCceEEEEEeeccCCC-CC-------
Q 024414           97 DKRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRD--IPEEKYTNAFLGYGPEDSHFVIELTYNYGVD-KY-------  164 (268)
Q Consensus        97 ~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~-~~-------  164 (268)
                      +..+|+||++.|+  |++++++||+++|||++....+  .+.......++..+++  .+.+++....... ..       
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g--~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASG--AVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTS--CCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCC--CEEEEEeeecCCCCCchhHHHHH
Confidence            5789999999999  9999999999999999885542  1222334566665443  3456665533211 11       


Q ss_pred             -CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccC---------CCC-------eEEEEEECCCCCEEEEEEeCCC
Q 024414          165 -DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK---------GGN-------TVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       165 -~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~---------~G~-------~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                       ..+.|++||||.|+|+++++++|+++|+++...|..+.         .+.       ...+|++||||+.|||++.+-.
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~~~  312 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTASTH  312 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCCCS
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccCCC
Confidence             13568999999999999999999999999877764321         111       1268999999999999986532


Q ss_pred             --CCCceeEEEEc
Q 024414          228 --PEPLCQVMLRV  238 (268)
Q Consensus       228 --~~~l~~v~L~v  238 (268)
                        |.-+..+.-+.
T Consensus       313 ~~~~~f~e~i~r~  325 (357)
T 2r5v_A          313 PRHTIFFEVIERQ  325 (357)
T ss_dssp             TTSCCEEEEEEEE
T ss_pred             CCCeEEEEEEEEc
Confidence              33445555444

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.47  E-value=2.2e-12  Score=118.11  Aligned_cols=158  Identities=14%  Similarity=0.090  Sum_probs=110.3

Q ss_pred             ccCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC
Q 024414           53 LFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI  132 (268)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~  132 (268)
                      ..+.++.++.+++||.+++-........   ........  ......+|+||++.|+|++++.+||++ |||.+......
T Consensus       110 ~~~g~~~~f~DPdG~~iEl~~~~~~~~~---~~~~~~~~--~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~  183 (365)
T 4ghg_A          110 KGIGDALRVEDPLGFPYEFFFETTHVER---LHMRYDLY--SAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQD  183 (365)
T ss_dssp             TTBCSEEEEECTTSCEEEEECCBCCCCC---CTTCTTTC--CTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEEC
T ss_pred             CCCceEEEEECCCCCEEEEEEEeecccc---cccccccc--ccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEec
Confidence            4456678899999999988543221111   10111111  112467999999999999999999976 99998877665


Q ss_pred             CCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH---HHHHHHHcCCe--EeeCCcccCCCCeE
Q 024414          133 PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK---TVELIKAKGGK--VTREPGPVKGGNTV  207 (268)
Q Consensus       133 ~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~---~~~~L~~~G~~--i~~~p~~~~~G~~~  207 (268)
                      +++.....|+......+.+.+.  ..       .+.+++|++|.|+|+++   +.++|+++|+.  +...|..+..+...
T Consensus       184 ~~g~~~~~f~~~~~~hH~la~~--~~-------~~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~  254 (365)
T 4ghg_A          184 DEGTTYAAWMHRKGTVHDTALT--GG-------NGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAF  254 (365)
T ss_dssp             TTSCEEEEEEESSSSSCSEEEE--ES-------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCE
T ss_pred             CCCceeEEeeecCCcccceeee--cC-------CCCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcE
Confidence            6555667788776655554432  21       13479999999998765   56688889974  44455555555668


Q ss_pred             EEEEECCCCCEEEEEEeC
Q 024414          208 IAFIEDPDGYKFELLERG  225 (268)
Q Consensus       208 ~~~~~DPdG~~iEl~e~~  225 (268)
                      ++|++||+|+.||+....
T Consensus       255 f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          255 YLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             EEEEECTTCCEEEEEECC
T ss_pred             EEEEECCCCceEEEEcCC
Confidence            899999999999998765

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.46  E-value=4.3e-12  Score=99.75  Aligned_cols=118  Identities=16%  Similarity=0.239  Sum_probs=80.7

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHhhc-CCEEEEE--ecC----CCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCC
Q 024414           99 RRMLHVVYRVG--DLDRTIKFYTECL-GMKLLRK--RDI----PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTG  169 (268)
Q Consensus        99 ~~l~HV~l~V~--Dle~a~~FY~~vL-G~~~~~~--~~~----~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g  169 (268)
                      .++. ..|.+.  |+++|++||+++| |+++...  ...    .++....+.+..+.  ..  +.+...........+.+
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g--~~--~~~~~~~~~~~~~~~~~   79 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD--QS--VHCIDSHVRHAFDFTPA   79 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT--EE--EEEEEESSCCSCCCCTT
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC--EE--EEEECCCCCCCCCCCCc
Confidence            3444 567786  9999999999999 9998752  211    11222233344442  22  22222110011112233


Q ss_pred             eeEEEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          170 FGHFGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       170 ~~hi~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                       ..++|.|+|   +|+++++|. +|+++..++.+.++| .+.++++||+|+.|+|..+
T Consensus        80 -~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 -FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             -EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEEC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEec
Confidence             479999999   999999999 999999999999887 4788999999999999874

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.46  E-value=1.5e-12  Score=114.10  Aligned_cols=124  Identities=13%  Similarity=0.016  Sum_probs=86.3

Q ss_pred             HhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeE
Q 024414           93 WVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH  172 (268)
Q Consensus        93 ~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  172 (268)
                      |.........++.+.|.|++++++||+++|||+.......+ +.  ...+..+.......+.+...    +...+....+
T Consensus       176 ~~~~~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  248 (301)
T 2zw5_A          176 AEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PE--FAEAALTPWSAGPRFRLAAV----PGPGPVEPVR  248 (301)
T ss_dssp             SCCSCEEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EE--EEEEESSSSSSSSEEEEEEC----CCSSCCCCCE
T ss_pred             hhhhcccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-cc--EEEEEcCCCccccccccccC----CCcCCCCceE
Confidence            44434445568889999999999999999999987544322 12  23444443111112222111    1011223458


Q ss_pred             EEEEEC-CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          173 FGIAVD-DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       173 i~f~V~-Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      ++|.|+ |+++++++++++|+++..+|.+.++| .+.++++|||||.|+|+++
T Consensus       249 ~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          249 LHLDAAGTADSLHRRAVDAGARVDGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCccHHHHHHHHHHcCCccccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            999999 99999999999999998888877765 4789999999999999985

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.32  E-value=1.2e-11  Score=113.70  Aligned_cols=141  Identities=16%  Similarity=0.255  Sum_probs=98.0

Q ss_pred             hcCceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEec-----CCCCceeEEEEeeCCCCceEEEEEeecc--CCCCC--
Q 024414           96 KDKRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRD-----IPEEKYTNAFLGYGPEDSHFVIELTYNY--GVDKY--  164 (268)
Q Consensus        96 ~~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~~lel~~~~--~~~~~--  164 (268)
                      ....+|+||++.|+  |++++++||+++|||+.....+     .+...+...++..+.+  .+.+++..+.  .....  
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g--~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTL--KVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTS--CSEEEEEEECCSSSCCHHH
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCC--cEEEEEecCCcCCCccHHH
Confidence            35789999999999  9999999999999999876532     2223344455543332  3556665543  11111  


Q ss_pred             -----CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC---------CC-------eEEEEEECCCCCEEEEEE
Q 024414          165 -----DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG---------GN-------TVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       165 -----~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~---------G~-------~~~~~~~DPdG~~iEl~e  223 (268)
                           ..+.|++||||.|+|+++++++|+++|+++...|..+..         +.       ....+-+||+|+.+++++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence                 246789999999999999999999999999877665422         10       114667899999999998


Q ss_pred             eCC--CCCCceeEEEEc
Q 024414          224 RGP--TPEPLCQVMLRV  238 (268)
Q Consensus       224 ~~~--~~~~l~~v~L~v  238 (268)
                      .+-  .|.-+-.+.-+.
T Consensus       338 ~~~~~~pt~f~E~iqR~  354 (381)
T 1t47_A          338 KPVQDRPTVFFEIIERH  354 (381)
T ss_dssp             CCSSSSSCCEEEEEEEE
T ss_pred             cCCCCCCeeEEEEEEEc
Confidence            764  334444555444

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.30  E-value=3e-11  Score=103.44  Aligned_cols=135  Identities=16%  Similarity=0.103  Sum_probs=93.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEE---EEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHF---GIA  176 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi---~f~  176 (268)
                      ..-+.+|.|+|.+++++||+++|||++..+..      ..+.++.+..  ...+.+.+...... ....|+.|+   ++.
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp~~~~-~~~~Glkh~a~i~i~   80 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAPSMRT-RKVEGRKKLARLIVK   80 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECCTTTC-BCCCSSCSEEEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCCCccc-ccccccceeeeEEEE
Confidence            45568899999999999999999999987655      3566665332  33344444222211 234577777   599


Q ss_pred             ECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---------C-------------CCceeE
Q 024414          177 VDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------P-------------EPLCQV  234 (268)
Q Consensus       177 V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---------~-------------~~l~~v  234 (268)
                      |++.+++..-|.. +..+.. .....+  ++.+|+.||+||.||++...+.         +             ..+ |+
T Consensus        81 vp~~~el~~lL~~-~~~~~~-~~~gdh--gyA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I  155 (244)
T 3e0r_A           81 VENPLEIEGILSK-TDSIHR-LYKGQN--GYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SM  155 (244)
T ss_dssp             ESSHHHHHHHHTT-CSCCSE-EEECSS--SEEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EE
T ss_pred             cCCHHHHHHHHhc-cccccc-ccccCC--cEEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EE
Confidence            9998887776655 544321 012223  4689999999999999976531         0             136 99


Q ss_pred             EEEcCCHHHHHHHHHH
Q 024414          235 MLRVGDLDRSINFYEQ  250 (268)
Q Consensus       235 ~L~v~d~~~s~~FY~~  250 (268)
                      +|+|.|.+++  ||++
T Consensus       156 ~LnV~d~~~s--Fy~~  169 (244)
T 3e0r_A          156 ELHLPTDIES--FLES  169 (244)
T ss_dssp             EEEECTTCCC--SCCH
T ss_pred             EEEcCchHHH--Hhhc
Confidence            9999999988  9976

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.27  E-value=1.6e-11  Score=111.78  Aligned_cols=128  Identities=17%  Similarity=0.164  Sum_probs=87.6

Q ss_pred             cCceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecCCC--CceeEEEEeeCCCCceEEEEEeec-cCCCC-------C
Q 024414           97 DKRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPE--EKYTNAFLGYGPEDSHFVIELTYN-YGVDK-------Y  164 (268)
Q Consensus        97 ~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~lel~~~-~~~~~-------~  164 (268)
                      .+.+|+||++.|+  |++++++||+++|||+.........  .+.....+....  ..+.+++... .....       .
T Consensus       155 ~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          155 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD--GMIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT--SSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             CeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC--CCEEEEEeeecCCCCChHHHhHHh
Confidence            4678999999999  9999999999999999887654222  122222232222  2345666654 22111       1


Q ss_pred             CCCCCeeEEEEEECCHHHHHHHHHHcCCeEee-CCcc---------cCCCCe-------EEEEEEC----CCCCEEEEEE
Q 024414          165 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTR-EPGP---------VKGGNT-------VIAFIED----PDGYKFELLE  223 (268)
Q Consensus       165 ~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~-~p~~---------~~~G~~-------~~~~~~D----PdG~~iEl~e  223 (268)
                      ..+.|++||||.|+|+++++++|+++|+++.. .|..         ...|..       ...+-.|    |+|+.+++++
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            14568999999999999999999999999876 5521         111211       1356678    8899999987


Q ss_pred             eCC
Q 024414          224 RGP  226 (268)
Q Consensus       224 ~~~  226 (268)
                      .+-
T Consensus       313 ~~~  315 (357)
T 1cjx_A          313 ETL  315 (357)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            664

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.24  E-value=2.6e-10  Score=90.32  Aligned_cols=115  Identities=11%  Similarity=0.145  Sum_probs=77.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhc-CCEEEEEecCC------CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECL-GMKLLRKRDIP------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH  172 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  172 (268)
                      +|....+.+.|.++|++||+++| |+++.......      ++.+..+.+..++.    .+..... . +... . . ..
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~----~~m~~d~-~-~~~~-~-~-~s   75 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ----VFMAIDA-N-SGTE-L-P-IS   75 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE----EEEEEC-----------C-CC
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE----EEEEECC-C-CCCC-c-e-EE
Confidence            44444455569999999999999 99987432111      12333344555421    1222211 1 1111 1 1 46


Q ss_pred             EEEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          173 FGIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       173 i~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +++.|+|   +++++++|. +|+++..++.+.++| .+..+++||+|+.|+|....
T Consensus        76 l~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           76 LFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             EEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHh-CCCEEeecccccCCC-ceEEEEECCCCCEEEEeecc
Confidence            8999987   788899998 799999999999886 58899999999999999754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.19  E-value=8.7e-10  Score=87.23  Aligned_cols=111  Identities=11%  Similarity=0.177  Sum_probs=78.2

Q ss_pred             EEeC-CHHHHHHHHHhhcC-CEEEEE--ec----CCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414          106 YRVG-DLDRTIKFYTECLG-MKLLRK--RD----IPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus       106 l~V~-Dle~a~~FY~~vLG-~~~~~~--~~----~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      |.+. |.++|++||+++|| .++...  +.    ..++.+..+.+..++    ..+.+...........++++ .++|.|
T Consensus        15 L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g----~~lm~~d~~~~~~~~~~~~~-~l~l~~   89 (138)
T 3oms_A           15 LMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNG----QEFMCIDSYVNHNFTFTPAM-SLYVTC   89 (138)
T ss_dssp             EEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEECSSCCSCCCCTTS-CEEEEE
T ss_pred             EEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECC----EEEEEEcCCCCCCCCCCCCE-EEEEEc
Confidence            6677 89999999999999 676543  21    123344456666653    22333332221222233343 689999


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          178 DD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       178 ~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      +|   +++++++|. .|+++..++.+.++| .+..+++||+|+.|.|.-
T Consensus        90 ~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg-~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           90 ETEEEIDTVFHKLA-QDGAILMPLGSYPFS-KKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             SSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEE
T ss_pred             CCHHHHHHHHHHHH-cCCeEecCcccccCC-cEEEEEECCCCCEEEEEe
Confidence            99   999999995 688999999999886 588999999999999874

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.18  E-value=1.1e-09  Score=89.73  Aligned_cols=113  Identities=16%  Similarity=0.203  Sum_probs=80.4

Q ss_pred             EEeCCHHHHHHHHHhhcCCEEEEEecCC--------------CCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCee
Q 024414          106 YRVGDLDRTIKFYTECLGMKLLRKRDIP--------------EEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFG  171 (268)
Q Consensus       106 l~V~Dle~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~  171 (268)
                      |.+.|.++|++||+++||+++.......              ++.+-.+.+..++    ..+.+....+ ..+..++++ 
T Consensus        31 L~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g----~~lm~~D~~g-~~~~~~~~~-  104 (172)
T 3l20_A           31 IAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLG----VKVLCSDSFG-RADKINNGI-  104 (172)
T ss_dssp             EEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETT----EEEEEEECTT-CCCCCCSSE-
T ss_pred             EEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECC----EEEEEECCCC-CCCCCCCcE-
Confidence            6677999999999999999987543321              1334456666653    2333333221 222233343 


Q ss_pred             EEEEEE--------CCHHHHHHHHHHcC-CeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          172 HFGIAV--------DDVAKTVELIKAKG-GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       172 hi~f~V--------~Did~~~~~L~~~G-~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      .+++.+        +|+++++++|.+.| +++..++.+.++|. +..+++||+|+.|+|....
T Consensus       105 sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~-r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          105 SLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGG-KMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             EEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSS-EEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCc-EEEEEECCCCCEEEEEeCC
Confidence            466666        57999999999999 79999999998874 7789999999999998654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.13  E-value=1.2e-09  Score=101.59  Aligned_cols=100  Identities=20%  Similarity=0.319  Sum_probs=74.9

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-----CceeEEEEeeCCCCceEEEEEeeccC---CCC----C
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----EKYTNAFLGYGPEDSHFVIELTYNYG---VDK----Y  164 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~---~~~----~  164 (268)
                      ...+|+||++.|+|++++++||+++|||++......++     .+....++..+.+  .+.+++.++..   ...    +
T Consensus       196 ~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~i~l~l~e~~~~~~~~s~i~~f  273 (418)
T 1sp8_A          196 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTF  273 (418)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHH
T ss_pred             CcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCC--cEEEEEeecccccCCCcchhhh
Confidence            35789999999999999999999999999987664322     2344566655433  35677766431   111    1


Q ss_pred             ---CCCCCeeEEEEEECCHHHHHHHHHH----cCCeEeeCC
Q 024414          165 ---DIGTGFGHFGIAVDDVAKTVELIKA----KGGKVTREP  198 (268)
Q Consensus       165 ---~~g~g~~hi~f~V~Did~~~~~L~~----~G~~i~~~p  198 (268)
                         ..+.|++||||.|+|+++++++|++    +|+++...|
T Consensus       274 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          274 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence               2577999999999999999999999    799988765

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.12  E-value=4.3e-10  Score=103.71  Aligned_cols=101  Identities=13%  Similarity=0.213  Sum_probs=76.6

Q ss_pred             cCceeeEEEEEeCC--HHHHHHHHHhhcCCEEEEEec---C--CCCceeEEEEeeCCCCceEEEEEeeccC-CCCC----
Q 024414           97 DKRRMLHVVYRVGD--LDRTIKFYTECLGMKLLRKRD---I--PEEKYTNAFLGYGPEDSHFVIELTYNYG-VDKY----  164 (268)
Q Consensus        97 ~~~~l~HV~l~V~D--le~a~~FY~~vLG~~~~~~~~---~--~~~~~~~~~l~~g~~~~~~~lel~~~~~-~~~~----  164 (268)
                      ...+|+||++.|+|  ++++++||+++|||+.....+   .  +..+++...+..+.  ..+.|+|.++.. ....    
T Consensus       170 ~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~--g~v~i~L~ep~~~~~~s~I~~  247 (393)
T 3isq_A          170 SLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGKKKSQIQE  247 (393)
T ss_dssp             CEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT--SSCEEEEEEEECCSBCCHHHH
T ss_pred             CeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC--CCEEEEEecCCCCCCCCHHHH
Confidence            46789999999998  999999999999999887643   1  22344555555443  346777776533 1111    


Q ss_pred             ----CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCc
Q 024414          165 ----DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPG  199 (268)
Q Consensus       165 ----~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~  199 (268)
                          ..+.|++||||.|+|+.+++++|+++|+++...|.
T Consensus       248 fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~  286 (393)
T 3isq_A          248 YVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPS  286 (393)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCH
T ss_pred             HHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCc
Confidence                14789999999999999999999999999887653

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.08  E-value=7.4e-10  Score=103.23  Aligned_cols=142  Identities=18%  Similarity=0.309  Sum_probs=97.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-----CceeEEEEeeCCCCceEEEEEeeccC---CCC----C
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----EKYTNAFLGYGPEDSHFVIELTYNYG---VDK----Y  164 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~---~~~----~  164 (268)
                      ...+|+||++.|+|++++++||+++|||++......++     .++...++..+.+  .+.+++.++..   ...    +
T Consensus       199 ~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~~~l~l~e~~~~~~~~s~i~~f  276 (424)
T 1sqd_A          199 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE--MVLLPINEPVHGTKRKSQIQTY  276 (424)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS--CSEEEEEEECCC---CCHHHHH
T ss_pred             CcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCC--cEEEEEecccccCCCcchhhhh
Confidence            35689999999999999999999999999987764322     2445556654433  35677766531   111    1


Q ss_pred             ---CCCCCeeEEEEEECCHHHHHHHHHH----cCCeEeeCC-cccCC------C------------CeEEEEEECCCCCE
Q 024414          165 ---DIGTGFGHFGIAVDDVAKTVELIKA----KGGKVTREP-GPVKG------G------------NTVIAFIEDPDGYK  218 (268)
Q Consensus       165 ---~~g~g~~hi~f~V~Did~~~~~L~~----~G~~i~~~p-~~~~~------G------------~~~~~~~~DPdG~~  218 (268)
                         ..+.|++||||.|+|+++++++|++    +|+++...| ..+-.      +            .....+-.|.+|+.
T Consensus       277 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~l  356 (424)
T 1sqd_A          277 LEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTL  356 (424)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEE
T ss_pred             hhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeE
Confidence               2577999999999999999999999    899988764 22200      0            01134556778888


Q ss_pred             EEEEEeCC--CCCCceeEEEEcCC
Q 024414          219 FELLERGP--TPEPLCQVMLRVGD  240 (268)
Q Consensus       219 iEl~e~~~--~~~~l~~v~L~v~d  240 (268)
                      ++++..+-  .|.-+-.+.-+.++
T Consensus       357 lqift~~~~~~pt~FfEiIqR~g~  380 (424)
T 1sqd_A          357 LQIFTKPLGDRPTIFIEIIQRVGC  380 (424)
T ss_dssp             EEEEBCCSSSSSCCEEEEEEEEEC
T ss_pred             EEEEccccCCCCceEEEEEEEcCc
Confidence            88887664  34455666666654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.59  E-value=2.9e-06  Score=74.34  Aligned_cols=153  Identities=13%  Similarity=0.156  Sum_probs=102.2

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcC-----CEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccC----------
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLG-----MKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG----------  160 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG-----~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~----------  160 (268)
                      +|..+|+|+++.|++++        .||     |++.........+..+..+.++ .   ..||+..-..          
T Consensus        20 ~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd-g---~YLElIai~~~~~~~~~~~~   87 (274)
T 3p8a_A           20 HMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN-E---NYIELLDVENNEKLKKMAKT   87 (274)
T ss_dssp             -CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS-S---SEEEEEEESCHHHHHHHTTS
T ss_pred             CccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC-C---EEEEEEeecCcccccccccc
Confidence            58999999999999873        467     9888766555555556666663 2   3566654211          


Q ss_pred             -CC--CC-------CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeC---CcccCCCC---eEEEEEECCC--CCEE-EE
Q 024414          161 -VD--KY-------DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTRE---PGPVKGGN---TVIAFIEDPD--GYKF-EL  221 (268)
Q Consensus       161 -~~--~~-------~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~---p~~~~~G~---~~~~~~~DPd--G~~i-El  221 (268)
                       ..  .+       ..+.|+.++++.|+|+++..+++.++|+.+..+   ....++|.   -+.++..|++  +..+ -|
T Consensus        88 ~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~~~~~PFf  167 (274)
T 3p8a_A           88 IEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFF  167 (274)
T ss_dssp             TGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCCSSCCCEE
T ss_pred             cCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCccCCCccEE
Confidence             01  11       246799999999999999999999999865321   12234442   2344555654  3222 34


Q ss_pred             EEeC-C-------------CCCCceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          222 LERG-P-------------TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       222 ~e~~-~-------------~~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      ++-. +             ....|.++++.+.|.+++.+.|+++||.+.....
T Consensus       168 iqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          168 IQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             EEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             EecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            4432 1             1235889999999999999999999999976543

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.37  E-value=1.8e-05  Score=64.08  Aligned_cols=129  Identities=16%  Similarity=0.135  Sum_probs=85.9

Q ss_pred             EEeC-CHHHHHHHHHhhc-CCEEEEE--ecC-----CCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414          106 YRVG-DLDRTIKFYTECL-GMKLLRK--RDI-----PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus       106 l~V~-Dle~a~~FY~~vL-G~~~~~~--~~~-----~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      |... |.++|++||+++| |.++...  ...     +++..-.+.+.+++.    .+.+....  +.+....++ .+.+.
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~----~~m~~d~~--p~~~~~~~~-sl~v~   83 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI----PCLGLNGG--PAFRHSEAF-SFQVA   83 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE----EEEEEECC--TTCCCCTTE-EEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE----EEEEECCC--CCcCCCCce-EEEEE
Confidence            5666 9999999999999 9988743  211     123455566666532    23333321  122333444 68889


Q ss_pred             ECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCceeEEEEcCCHHHHHHHHHHhcC
Q 024414          177 VDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFG  253 (268)
Q Consensus       177 V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~~s~~FY~~vlG  253 (268)
                      |+|   +++++++|.+.|+++.      ..|     .++||.|+.|.|..+.-     . -.|.-.|.+++.+.++..++
T Consensus        84 ~~d~~e~d~~~~~L~~~Gg~v~------~~G-----~v~D~fGv~W~i~~~~~-----~-~~~~d~d~~~~~r~~~am~~  146 (163)
T 1u69_A           84 TDDQAETDRLWNAIVDNGGEES------ACG-----WCRDKWGISWQITPRVL-----S-EAIASPDRAAARRAFEAMMT  146 (163)
T ss_dssp             ESSHHHHHHHHHHHHHTTCEEC------STT-----EEECTTSCEEEEEEHHH-----H-HHHTCSSHHHHHHHHHHHTT
T ss_pred             eCCHHHHHHHHHHHHhCCCEEE------EEE-----EEECCCCCEEEEEeEch-----H-HhccCCCHHHHHHHHHHHHC
Confidence            988   7788999988898875      233     79999999999984320     0 01123578899999999999


Q ss_pred             CeEee
Q 024414          254 MELLR  258 (268)
Q Consensus       254 ~~~~~  258 (268)
                      |+..+
T Consensus       147 m~k~d  151 (163)
T 1u69_A          147 MGRID  151 (163)
T ss_dssp             CSSCC
T ss_pred             Cccee
Confidence            97543

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=97.89  E-value=0.00018  Score=54.53  Aligned_cols=89  Identities=22%  Similarity=0.329  Sum_probs=67.4

Q ss_pred             CCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC----------CCceeEEEE
Q 024414          168 TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP----------EPLCQVMLR  237 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~----------~~l~~v~L~  237 (268)
                      .++.|+++.|+|++++.+.....|.+........+..+.+.+++.. +|..++|+++....          ..+.|+.+.
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf~   84 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDGEDSPINKTIKKGSTPYHICYE   84 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESSTTCTHHHHTTTSCEEEEEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCCCCChHHHHHhcCCceEEEEEE
Confidence            4788999999999999999988998876543222333445565655 67789999876432          346799999


Q ss_pred             cCCHHHHHHHHHHhcCCeEee
Q 024414          238 VGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      |.|++++.+..++ .|.++..
T Consensus        85 v~di~~~~~~l~~-~G~~~~~  104 (133)
T 3hdp_A           85 VEDIQKSIEEMSQ-IGYTLFK  104 (133)
T ss_dssp             ESCHHHHHHHHTT-TTEEEEE
T ss_pred             cCCHHHHHHHHHH-cCCcccc
Confidence            9999999998865 7888654

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=97.74  E-value=0.00029  Score=55.31  Aligned_cols=92  Identities=22%  Similarity=0.293  Sum_probs=67.4

Q ss_pred             CCCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccC-------------CCCeEEEEEECCCCCEEEEEEeCCCC----
Q 024414          167 GTGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVK-------------GGNTVIAFIEDPDGYKFELLERGPTP----  228 (268)
Q Consensus       167 g~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~-------------~G~~~~~~~~DPdG~~iEl~e~~~~~----  228 (268)
                      -.++.|+++.|.|++++.+...+ .|.+........+             .+..+.+++.. .+..+||++....+    
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~~~~~~~   95 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDENPSTWR   95 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECSSSCHHH
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECCCCChhH
Confidence            35899999999999999999987 8987543211100             12345555554 47789999986533    


Q ss_pred             -------CCceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          229 -------EPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       229 -------~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                             ..+.|+.+.|.|++++.+..++ .|.++....
T Consensus        96 ~~l~~~~~g~~Hiaf~v~di~~~~~~l~~-~G~~~~~~~  133 (159)
T 3gm5_A           96 EFLDKNGEGIHHIAFVVKDMDRKVEELYR-KGMKVIQKG  133 (159)
T ss_dssp             HHHHHHCSEEEEEEEECSCHHHHHHHHHH-TTCCEEEEE
T ss_pred             HHhhcCCceEEEEEEEcCCHHHHHHHHHH-CCCcEeecc
Confidence                   2577999999999999999977 798876553

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.62  E-value=0.00016  Score=72.53  Aligned_cols=119  Identities=18%  Similarity=0.232  Sum_probs=73.3

Q ss_pred             CceeeEEEEEe---CCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeec----------------
Q 024414           98 KRRMLHVVYRV---GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN----------------  158 (268)
Q Consensus        98 ~~~l~HV~l~V---~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~----------------  158 (268)
                      ..+...+.+..   .-++++++||+++|+++....   .+.....+++...+  ..+.+++...                
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (941)
T 3opy_B            7 FNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKN---SNQKLFWLQLEEDQ--NNVSIQLILDPEHAASVSQIDQNIRN   81 (941)
T ss_dssp             SCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSS---CSCCC---EECCTT--SCCEEEEECSSCSCHHHHHHHHHHHC
T ss_pred             ecceeEEEEEeCCHHHHHHHHHHHHhhccceeccc---cCCcceeEEEecCC--CeEEEEEEeccccchhHHHHHHHHhh
Confidence            44555555554   468999999999999976542   22222234443232  2334443322                


Q ss_pred             ----cCCCCCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          159 ----YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       159 ----~~~~~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                          .....| ++... |+.|.+.|++++.+.|.+.+.++..-|.+..   ...+|..||+||.|+|.+...
T Consensus        82 ~~~~~~~~dW-~~~~~-~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           82 LTRSLYRKDW-RSIQS-NIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CC-----------CCC-EEEEEESCHHHHHHHHHTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSS
T ss_pred             hhcccccccc-cccCc-eEEEEeCCHHHHHHHHHhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCC
Confidence                011112 22222 9999999999999999999988765555442   356899999999999998775

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=97.52  E-value=4.7e-05  Score=60.07  Aligned_cols=33  Identities=15%  Similarity=0.195  Sum_probs=29.1

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeeeecC
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRKRDN  262 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~  262 (268)
                      +|.|+.|.|.|+++|++||+++|||++......
T Consensus        26 ri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~   58 (155)
T 4g6x_A           26 RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPV   58 (155)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             EEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecC
Confidence            689999999999999999999999998665433

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=97.45  E-value=0.00095  Score=52.68  Aligned_cols=88  Identities=22%  Similarity=0.312  Sum_probs=66.8

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC-----------CCceeEE
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP-----------EPLCQVM  235 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~-----------~~l~~v~  235 (268)
                      .++.|+++.|.|++++.+...+ .|.+...... .+.++.+.+++.. .|..++|++.....           ..+.|+.
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hia   84 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMED-LPSQGVKIAFLEI-GESKIELLEPLSEESPIAKFIQKRGEGIHHIA   84 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEE-EGGGTEEEEEEEE-TTEEEEEEEESSTTSHHHHHHHHHCSEEEEEE
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeec-cCCCCeEEEEEeC-CCeEEEEEeECCCCChHHHHhhcCCCCeEEEE
Confidence            4788999999999999999998 8988764322 2223345566665 56789999876432           3578999


Q ss_pred             EEcCCHHHHHHHHHHhcCCeEee
Q 024414          236 LRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       236 L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      +.|.|++++.+..++ .|.++..
T Consensus        85 f~V~Did~~~~~l~~-~G~~~~~  106 (161)
T 3oa4_A           85 IGVKSIEERIQEVKE-NGVQMIN  106 (161)
T ss_dssp             EECSCHHHHHHHHHH-TTCCBSC
T ss_pred             EEECCHHHHHHHHHH-CCCEecc
Confidence            999999999999976 7887644

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=97.42  E-value=0.0053  Score=45.99  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=64.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC---CCEEEEEEeCCC-----CCCceeEEEEcC
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD---GYKFELLERGPT-----PEPLCQVMLRVG  239 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd---G~~iEl~e~~~~-----~~~l~~v~L~v~  239 (268)
                      .+.|+++.|.|++++.+...+ .|.++..... .+.+....+++..++   +..+++.+....     ...+.|+.+.|.
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSE-NPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-ETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecc-cCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            367999999999999999987 8998764321 223344556666544   788999875431     235679999999


Q ss_pred             CHHHHHHHHHHhcCCeEee
Q 024414          240 DLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       240 d~~~s~~FY~~vlG~~~~~  258 (268)
                      |++++.+..++ .|.++..
T Consensus        81 d~~~~~~~l~~-~G~~~~~   98 (135)
T 1f9z_A           81 NAAEACEKIRQ-NGGNVTR   98 (135)
T ss_dssp             CHHHHHHHHHH-TTCEEEE
T ss_pred             CHHHHHHHHHH-CCCEEec
Confidence            99999999876 6877654

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=97.37  E-value=0.0024  Score=48.75  Aligned_cols=88  Identities=15%  Similarity=0.157  Sum_probs=66.3

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCC-----CEEEEEEeCCC-----------C--
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDG-----YKFELLERGPT-----------P--  228 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG-----~~iEl~e~~~~-----------~--  228 (268)
                      .++.|+++.|.|++++.+...+ .|.++.... ..+.++...+++..+++     ..++|++....           .  
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   86 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHRE-ENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   86 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEE-EETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecc-cCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCC
Confidence            4688999999999999999875 899876432 12222345677887775     88999986532           1  


Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEe
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~  257 (268)
                      ..+.|+.+.|.|++++.+..++ .|.++.
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l~~-~G~~~~  114 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATLRE-RGVQLL  114 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-HTCCBS
T ss_pred             CceEEEEEECCCHHHHHHHHHH-CCCeec
Confidence            4567999999999999999877 577654

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=97.33  E-value=0.0021  Score=49.49  Aligned_cols=89  Identities=15%  Similarity=0.190  Sum_probs=67.4

Q ss_pred             CCCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCccc-------CCCCeEEEEEECCCCCEEEEEEeCC----------CC
Q 024414          167 GTGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPV-------KGGNTVIAFIEDPDGYKFELLERGP----------TP  228 (268)
Q Consensus       167 g~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~-------~~G~~~~~~~~DPdG~~iEl~e~~~----------~~  228 (268)
                      -.++.|+++.|.|++++.+...+ .|.++.......       ..+  ..+++.-++|..++|++...          ..
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~   94 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG--KVANFITPDGTILDLFGEPELSPPDPNPEKTF   94 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT--SEEEEECTTSCEEEEEECTTCCCSSSSTTCCC
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC--cEEEEEeCCCCEEEEEecCCCCcCCCCCCCCC
Confidence            35888999999999999999988 899876521110       122  34677777889999998754          12


Q ss_pred             CCceeEEEEcC--CHHHHHHHHHHhcCCeEee
Q 024414          229 EPLCQVMLRVG--DLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       229 ~~l~~v~L~v~--d~~~s~~FY~~vlG~~~~~  258 (268)
                      ..+.|+.+.|.  |++++.+...+ .|.++..
T Consensus        95 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~  125 (156)
T 3kol_A           95 TRAYHLAFDIDPQLFDRAVTVIGE-NKIAIAH  125 (156)
T ss_dssp             SSCCEEEEECCGGGHHHHHHHHHH-TTCCEEE
T ss_pred             CceEEEEEEecHHHHHHHHHHHHH-CCCcccc
Confidence            46789999998  99999999876 6887653

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=97.32  E-value=0.0045  Score=47.45  Aligned_cols=89  Identities=17%  Similarity=0.166  Sum_probs=65.8

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC---CCEEEEEEeCC-----CCCCceeEEEEc
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD---GYKFELLERGP-----TPEPLCQVMLRV  238 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd---G~~iEl~e~~~-----~~~~l~~v~L~v  238 (268)
                      .++.|+++.|.|++++.+...+ .|.++..... .+.+.....++.-++   +..++|++...     ....+.|+.+.|
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v   85 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWD-VPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGV   85 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-EGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEE
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeee-cCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEe
Confidence            4678999999999999999976 8988764321 122334456666554   58999998753     234578999999


Q ss_pred             CCHHHHHHHHHHhcCCeEee
Q 024414          239 GDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       239 ~d~~~s~~FY~~vlG~~~~~  258 (268)
                      .|++++.+...+ .|.++..
T Consensus        86 ~d~~~~~~~l~~-~G~~~~~  104 (144)
T 2c21_A           86 EDVKELVADMRK-HDVPIDY  104 (144)
T ss_dssp             SCHHHHHHHHHH-TTCCEEE
T ss_pred             CCHHHHHHHHHH-CCCEEec
Confidence            999999998876 6777654

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=97.27  E-value=0.0044  Score=46.07  Aligned_cols=88  Identities=17%  Similarity=0.159  Sum_probs=63.8

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE-------eCCC---------CCC
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE-------RGPT---------PEP  230 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e-------~~~~---------~~~  230 (268)
                      .++.|+++.|.|++++.+...+ .|.++...... +.+....+++... +..++|++       ....         ...
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~g   81 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHR-PKRHDYKLDLKCG-DIELEIFGNKLTDSNYCAPPERISWPREACG   81 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEE-TTTTEEEEEEEET-TEEEEEEECCTTSTTCCCCCCCCCSSSCCSE
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeec-CCCcceEEEEecC-CeEEEEEecccccccccCCccccCCCCCCCC
Confidence            3678999999999999999977 89887654222 2233445666654 44899998       2221         224


Q ss_pred             ceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          231 LCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       231 l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      +.|+.+.|.|++++.+..++ .|.++..
T Consensus        82 ~~~~~~~v~d~~~~~~~l~~-~G~~~~~  108 (134)
T 3l7t_A           82 LRHLAFYVEDVEASRQELIA-LGIRVEE  108 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHH-HTCCCCC
T ss_pred             eEEEEEEECCHHHHHHHHHh-CCCcccc
Confidence            57999999999999999977 6777643

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=97.26  E-value=0.004  Score=46.25  Aligned_cols=86  Identities=19%  Similarity=0.283  Sum_probs=63.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC------------CCCceeEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVM  235 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~------------~~~l~~v~  235 (268)
                      ++.|+++.|.|++++.+...+ .|.++..... .+.++...+++.. +|..+++++....            ...+.|+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~   82 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVP-LPEHGVSVVFVNL-GNTKMELLHPLGLDSPIAGFLQKNKAGGMHHIC   82 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEE-EGGGTEEEEEEEC-SSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeee-cCCCCEEEEEEec-CCEEEEEEecCCCCchhhhhhhccCCCCceEEE
Confidence            578999999999999999998 8988754321 2222345555554 6788999986532            23568999


Q ss_pred             EEcCCHHHHHHHHHHhcCCeEe
Q 024414          236 LRVGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       236 L~v~d~~~s~~FY~~vlG~~~~  257 (268)
                      +.|.|++++.+..++ .|.++.
T Consensus        83 ~~v~d~~~~~~~l~~-~G~~~~  103 (134)
T 3rmu_A           83 IEVDNINAAVMDLKK-KKIRSL  103 (134)
T ss_dssp             EEESCHHHHHHHHHH-TTCTTB
T ss_pred             EEcCCHHHHHHHHHH-cCCccc
Confidence            999999999999877 677653

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=97.25  E-value=0.00021  Score=55.29  Aligned_cols=34  Identities=26%  Similarity=0.430  Sum_probs=30.6

Q ss_pred             CCCceeEEEEcCCHHHHHHHHHHhcCCeEeeeec
Q 024414          228 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       228 ~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~  261 (268)
                      ..++.|+.|.|.|++++.+||+++|||++.....
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~   59 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS   59 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC
Confidence            4679999999999999999999999999877753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=97.22  E-value=0.0041  Score=47.68  Aligned_cols=88  Identities=23%  Similarity=0.348  Sum_probs=64.2

Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCccc----------CCCCeEEEEEECCCC-CEEEEEEeC--CC--------
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPV----------KGGNTVIAFIEDPDG-YKFELLERG--PT--------  227 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~----------~~G~~~~~~~~DPdG-~~iEl~e~~--~~--------  227 (268)
                      ++.|+++.|.|++++.+...+.|.++.......          +......+++.-++| ..++|++..  ..        
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~   90 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAP   90 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCC
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccccCCC
Confidence            678999999999999999988999876431100          112345677777777 789998742  11        


Q ss_pred             --CCCceeEEEEcCCHHHHHHHHHHhcCCeEe
Q 024414          228 --PEPLCQVMLRVGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       228 --~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~  257 (268)
                        ...+.|+.+.|.|++++.+..++ .|.++.
T Consensus        91 ~~~~g~~hl~~~v~d~~~~~~~l~~-~G~~~~  121 (153)
T 1ss4_A           91 VNALGYLRVMFTVEDIDEMVSRLTK-HGAELV  121 (153)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHH-TTCEES
T ss_pred             CCCCceEEEEEEeCCHHHHHHHHHH-CCCeec
Confidence              12356999999999999999977 687764

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=97.18  E-value=0.00036  Score=52.99  Aligned_cols=32  Identities=28%  Similarity=0.626  Sum_probs=29.2

Q ss_pred             CCCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          228 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       228 ~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      +.+++|+.|.|.|++++.+||+++|||++.+.
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~   38 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARR   38 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeecc
Confidence            56799999999999999999999999998554

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.11  E-value=0.00058  Score=58.82  Aligned_cols=69  Identities=7%  Similarity=-0.025  Sum_probs=51.3

Q ss_pred             cccCcCCCcccccccCcccccccccccccccccccccChhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEE
Q 024414           52 QLFGLRAAKPLRGDVNSTGVASSAGNAAQASTSAAHESALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRK  129 (268)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~  129 (268)
                      ..+|.++.++.+++||.+++.......+    ....+ .+   ...+.+|+||+|.|+|++++.+|| ++|||+...+
T Consensus       118 ~~~g~~~~~f~DPdGn~iEl~~~~~~~~----~~~~~-~~---~~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          118 PFFNAYSCYVEDPSGNIIELISRQQAAP----VLDKP-FS---ADQLLSIGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             TTTTEEEEEEECTTCCEEEEEEESSSSC----CCCSC-CC---GGGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             ccCCeEEEEEECCCCCEEEEEEeCCCCc----cccCC-CC---HHHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            3678889999999999999876422111    11111 11   135789999999999999999999 9999997754

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=97.06  E-value=0.0072  Score=44.70  Aligned_cols=88  Identities=14%  Similarity=0.181  Sum_probs=62.3

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-------CCCceeEEEEcCC
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-------PEPLCQVMLRVGD  240 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-------~~~l~~v~L~v~d  240 (268)
                      .+.|+++.|.|++++.+...+ .|.+....... +.++...+++..++|..++|++....       ...+.|+.+.|.|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~d   81 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYEN-KTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGT   81 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEE-GGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEECSS
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeeccccc-CCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEEcCC
Confidence            466999999999999999865 69887543211 12234566777677999999987632       2347899999999


Q ss_pred             ---HHHHHHHHHHhcCCeEee
Q 024414          241 ---LDRSINFYEQAFGMELLR  258 (268)
Q Consensus       241 ---~~~s~~FY~~vlG~~~~~  258 (268)
                         ++++.+...+ .|.++..
T Consensus        82 ~~~v~~~~~~l~~-~G~~~~~  101 (127)
T 3e5d_A           82 KEAVDELTEKLRQ-DGFAIAG  101 (127)
T ss_dssp             HHHHHHHHHHHHH-TTCCEEE
T ss_pred             HHHHHHHHHHHHH-cCCeEec
Confidence               5555555544 6877654

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=97.05  E-value=0.0056  Score=45.11  Aligned_cols=87  Identities=17%  Similarity=0.201  Sum_probs=62.4

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC--------CCCceeEEEEc
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVMLRV  238 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~--------~~~l~~v~L~v  238 (268)
                      .++.|+++.|.|++++.+...+ .|.++...... +.+....+++.-+++ .++|++....        ...+.|+.+.|
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~-~l~l~~~~~~~~~~~~~~~~g~~~~~~~v   81 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHR-PEKNDIKLDLKLGSQ-ELEIFISDQFPARPSYPEALGLRHLAFKV   81 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEE-GGGTEEEEEEEETTE-EEEEEECTTCCCCCCSSCCSSCCCEEEEC
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccC-CCCcceEEEEecCCe-EEEEEeccCCCCCCCCCCCccceEEEEEe
Confidence            3577999999999999999987 89987643211 122334455665666 8999875321        23577999999


Q ss_pred             CCHHHHHHHHHHhcCCeEe
Q 024414          239 GDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       239 ~d~~~s~~FY~~vlG~~~~  257 (268)
                      .|++++.+..++ .|.++.
T Consensus        82 ~d~~~~~~~l~~-~G~~~~   99 (126)
T 2p25_A           82 EHIEEVIAFLNE-QGIETE   99 (126)
T ss_dssp             SCHHHHHHHHHH-TTCCCC
T ss_pred             CCHHHHHHHHHH-cCCccc
Confidence            999999998876 677654

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=97.01  E-value=0.00058  Score=51.89  Aligned_cols=32  Identities=22%  Similarity=0.279  Sum_probs=29.1

Q ss_pred             CCCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          228 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       228 ~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      ..+++|+.|.|.|++++.+||+++|||++...
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~   42 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFV   42 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEc
Confidence            46899999999999999999999999998654

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=97.00  E-value=0.00053  Score=51.46  Aligned_cols=32  Identities=31%  Similarity=0.543  Sum_probs=29.3

Q ss_pred             CCCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          228 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       228 ~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      ..+++|+.|.|.|++++.+||+++|||++...
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~   39 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSF   39 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEe
Confidence            46789999999999999999999999998765

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=96.97  E-value=0.00058  Score=53.10  Aligned_cols=31  Identities=26%  Similarity=0.591  Sum_probs=28.8

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .+++|+.|.|.|++++.+||+++|||++..+
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~   52 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTF   52 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEc
Confidence            5689999999999999999999999998766

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=96.96  E-value=0.017  Score=46.18  Aligned_cols=92  Identities=15%  Similarity=0.198  Sum_probs=68.3

Q ss_pred             CCCCeeEEEEEECCHHHHHHHHH-HcCCeEeeCCcccCCCCeEEEEEECCCC------------------CEEEEEEeCC
Q 024414          166 IGTGFGHFGIAVDDVAKTVELIK-AKGGKVTREPGPVKGGNTVIAFIEDPDG------------------YKFELLERGP  226 (268)
Q Consensus       166 ~g~g~~hi~f~V~Did~~~~~L~-~~G~~i~~~p~~~~~G~~~~~~~~DPdG------------------~~iEl~e~~~  226 (268)
                      ..-.+.|+++.|.|+++..+... ..|.++..... .+.+.....++..+++                  ..++|++...
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCD-FPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-ETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccc-cCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            44578899999999999999995 48988765422 2334456667777664                  7899976532


Q ss_pred             --------------CCCCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          227 --------------TPEPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       227 --------------~~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                                    .+..+.|+.+.|.|++++.+-.++ .|.++...
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~  155 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEE-LGVKFVKK  155 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHH-TTCCEEEC
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHH-CCCeEeeC
Confidence                          113577999999999999999976 68887654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=96.93  E-value=0.015  Score=46.62  Aligned_cols=90  Identities=13%  Similarity=0.210  Sum_probs=65.5

Q ss_pred             CCCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC------------------CCEEEEEEeCC-
Q 024414          167 GTGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD------------------GYKFELLERGP-  226 (268)
Q Consensus       167 g~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd------------------G~~iEl~e~~~-  226 (268)
                      ...+.|+++.|.|++++.+...+ .|+++..... .+.+....+++..++                  |..++|++... 
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~  107 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLD-FPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGT  107 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-EGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEecc-CCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCC
Confidence            45788999999999999999987 8998764321 122233445566543                  67899987532 


Q ss_pred             -------------CCCCceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          227 -------------TPEPLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       227 -------------~~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                                   ....+.|+.+.|.|++++.+...+ .|.++..
T Consensus       108 ~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~  151 (184)
T 2za0_A          108 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEE-LGVKFVK  151 (184)
T ss_dssp             GGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHH-TTCCEEE
T ss_pred             CCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHH-CCCeeec
Confidence                         114578999999999999999977 6887654

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=96.91  E-value=0.00048  Score=53.51  Aligned_cols=30  Identities=13%  Similarity=0.197  Sum_probs=27.2

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      .+++|+.|.|.|++++.+||+++|||++..
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~   49 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDI   49 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEe
Confidence            357899999999999999999999999853

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=96.89  E-value=0.00072  Score=52.51  Aligned_cols=32  Identities=22%  Similarity=0.459  Sum_probs=29.0

Q ss_pred             CCCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          228 PEPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       228 ~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      ..+++|+.|.|.|++++.+||+++|||++...
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~   56 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTF   56 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEec
Confidence            45789999999999999999999999998754

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=96.88  E-value=0.00064  Score=53.17  Aligned_cols=31  Identities=26%  Similarity=0.448  Sum_probs=28.6

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .+++|+.|.|.|++++.+||+++|||++...
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~   54 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI   54 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC
Confidence            5799999999999999999999999998763

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=96.82  E-value=0.014  Score=43.43  Aligned_cols=88  Identities=15%  Similarity=0.141  Sum_probs=64.5

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC-CCEEEEEEeC-----CCCCCceeEEEEcCC
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD-GYKFELLERG-----PTPEPLCQVMLRVGD  240 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd-G~~iEl~e~~-----~~~~~l~~v~L~v~d  240 (268)
                      .++.|+++.|.|++++.+...+ .|.++..... .+. +...+.+..++ +..+++.+..     ..+....|+.+.|.|
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   89 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQ-LDP-NMRFVTVVPPGAQTQVALGLPSWYEDGRKPGGYTGISLITRD   89 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-EET-TEEEEEEECTTCSCEEEEECGGGCSSCCCSCEEEEEEEEESC
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeecc-cCC-CceEEEEECCCCceEEEEecCcccccccCCCCeEEEEEEeCC
Confidence            4788999999999999999965 8988765422 112 23455566554 4568888754     234567899999999


Q ss_pred             HHHHHHHHHHhcCCeEee
Q 024414          241 LDRSINFYEQAFGMELLR  258 (268)
Q Consensus       241 ~~~s~~FY~~vlG~~~~~  258 (268)
                      ++++.+...+ .|.++..
T Consensus        90 ~~~~~~~l~~-~G~~~~~  106 (133)
T 4hc5_A           90 IDEAYKTLTE-RGVTFTK  106 (133)
T ss_dssp             HHHHHHHHHH-TTCEESS
T ss_pred             HHHHHHHHHH-CCCEeec
Confidence            9999999977 5887653

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=96.78  E-value=0.00066  Score=51.68  Aligned_cols=29  Identities=14%  Similarity=0.423  Sum_probs=26.9

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .+.|+.|.|.|++++.+||++ |||++...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~   34 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRI-IGFQFTAS   34 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCCEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHH-CCCEEecc
Confidence            578999999999999999999 99998765

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=96.76  E-value=0.0006  Score=53.01  Aligned_cols=32  Identities=19%  Similarity=0.284  Sum_probs=29.0

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      .+++|+.|.|.|++++.+||+++|||++..+.
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~   55 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESS   55 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCC
Confidence            48999999999999999999999999986653

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=96.76  E-value=0.013  Score=42.62  Aligned_cols=82  Identities=20%  Similarity=0.313  Sum_probs=59.7

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC-CCceeEEEEc---CCHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP-EPLCQVMLRV---GDLDR  243 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~-~~l~~v~L~v---~d~~~  243 (268)
                      ++.|+.+.|.|++++.+...+ .|.++....    ++  ...++..++|..+++.+....+ ....|+.+.|   .|+++
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~v~~~~d~~~   76 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR----GN--AFAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE----TT--TEEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHH
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC----CC--cEEEEEcCCCcEEEEEeCCCCCCCceeEEEEEcCCHHHHHH
Confidence            567999999999999999987 898876431    11  2356677778889998765433 4688999999   66666


Q ss_pred             HHHHHHHhcCCeEe
Q 024414          244 SINFYEQAFGMELL  257 (268)
Q Consensus       244 s~~FY~~vlG~~~~  257 (268)
                      +.+...+ .|.++.
T Consensus        77 ~~~~l~~-~G~~~~   89 (113)
T 1xqa_A           77 INQRLKE-DGFLVE   89 (113)
T ss_dssp             HHHHHHH-TTCCCC
T ss_pred             HHHHHHH-CCCEEe
Confidence            6666544 676643

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=96.70  E-value=0.0011  Score=49.05  Aligned_cols=30  Identities=13%  Similarity=0.040  Sum_probs=27.3

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      ++.|+.|.|.|++++.+||+++|||++...
T Consensus         5 ~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~   34 (118)
T 2i7r_A            5 NLNQLDIIVSNVPQVCADLEHILDKKADYA   34 (118)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHHHhCCeeEEe
Confidence            578999999999999999999999997653

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=96.66  E-value=0.026  Score=41.82  Aligned_cols=87  Identities=13%  Similarity=0.152  Sum_probs=62.3

Q ss_pred             CeeEEEEEE--CCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC-CCCCceeEEEEcCCHHHH
Q 024414          169 GFGHFGIAV--DDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRS  244 (268)
Q Consensus       169 g~~hi~f~V--~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~-~~~~l~~v~L~v~d~~~s  244 (268)
                      ++.|+++.|  .|++++.+...+ .|.++............  .++.. +|..++|.+... .+....|+.+.|.|++++
T Consensus        10 ~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~--~~~~~-~~~~l~l~~~~~~~~~~~~~~~f~v~d~~~~   86 (126)
T 2qqz_A           10 GIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGG--CWFKC-GNQEIHIGVEQNFNPAKRAHPAFYVLKIDEF   86 (126)
T ss_dssp             EEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCC--EEEEE-TTEEEEEEECTTCCCCSSSCEEEEETTHHHH
T ss_pred             eeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCc--eEEEe-CCEEEEEEecCCCCCCCceEEEEEcCCHHHH
Confidence            678999999  799999999976 89988654322111111  33443 456788887543 346789999999999999


Q ss_pred             HHHHHHhcCCeEeee
Q 024414          245 INFYEQAFGMELLRK  259 (268)
Q Consensus       245 ~~FY~~vlG~~~~~~  259 (268)
                      .+..++ .|.++...
T Consensus        87 ~~~l~~-~G~~~~~~  100 (126)
T 2qqz_A           87 KQELIK-QGIEVIDD  100 (126)
T ss_dssp             HHHHHH-TTCCCEEE
T ss_pred             HHHHHH-cCCCccCC
Confidence            999877 68776544

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=96.56  E-value=0.0031  Score=48.92  Aligned_cols=36  Identities=25%  Similarity=0.256  Sum_probs=31.5

Q ss_pred             CCCCCCceeEEEEcCCHHHHHHHH---HHhcCCeEeeee
Q 024414          225 GPTPEPLCQVMLRVGDLDRSINFY---EQAFGMELLRKR  260 (268)
Q Consensus       225 ~~~~~~l~~v~L~v~d~~~s~~FY---~~vlG~~~~~~~  260 (268)
                      .+....++|+.|.|.|++++.+||   +++|||++....
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~   53 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSW   53 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEec
Confidence            345678999999999999999999   999999987654

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=96.39  E-value=0.0032  Score=47.13  Aligned_cols=29  Identities=14%  Similarity=0.320  Sum_probs=26.2

Q ss_pred             ceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          231 LCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       231 l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      ..|+.|.|.|++++.+||+++|||++...
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~   34 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFV   34 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEec
Confidence            46899999999999999999999998654

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=96.36  E-value=0.037  Score=41.92  Aligned_cols=87  Identities=10%  Similarity=0.216  Sum_probs=60.5

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCC-CCeEEEEEECCCCCEEEEEEeCCC-CCCceeEEEEcC--CHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKG-GNTVIAFIEDPDGYKFELLERGPT-PEPLCQVMLRVG--DLDR  243 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~-G~~~~~~~~DPdG~~iEl~e~~~~-~~~l~~v~L~v~--d~~~  243 (268)
                      ++.|+.+.|.|++++.+...+ .|.++......... .+.. .++.- +|..+++++.... ...+.|+.+.|.  |+++
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~-g~~~l~l~~~~~~~~~~~~h~~~~v~~~d~~~   81 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSRE-KFFLI-GDIWVAIMQGEKLAERSYNHIAFKIDDADFDR   81 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCE-EEEEE-TTEEEEEEECCCCSSCCSCEEEEECCGGGHHH
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccce-EEEEE-CCEEEEEEeCCCCCCCCeeEEEEEcCHHHHHH
Confidence            578999999999999999976 89987653221111 0111 13332 5678888876543 356889999998  9999


Q ss_pred             HHHHHHHhcCCeEee
Q 024414          244 SINFYEQAFGMELLR  258 (268)
Q Consensus       244 s~~FY~~vlG~~~~~  258 (268)
                      +.+...+ .|.++..
T Consensus        82 ~~~~l~~-~G~~~~~   95 (139)
T 1r9c_A           82 YAERVGK-LGLDMRP   95 (139)
T ss_dssp             HHHHHHH-HTCCBCC
T ss_pred             HHHHHHH-CCCcccC
Confidence            9888876 5776543

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=96.35  E-value=0.0018  Score=48.43  Aligned_cols=29  Identities=17%  Similarity=0.222  Sum_probs=26.0

Q ss_pred             ceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          231 LCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       231 l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      -.|+.|.|.|++++.+||+++|||++...
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~   34 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeC
Confidence            35789999999999999999999998764

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=96.25  E-value=0.043  Score=41.44  Aligned_cols=83  Identities=17%  Similarity=0.200  Sum_probs=59.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC-----------CCCCCceeEEEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG-----------PTPEPLCQVMLR  237 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~-----------~~~~~l~~v~L~  237 (268)
                      ++.|+++.|.|++++.+...+.|.++....   +.+.  .+.+.-++|..+.+.+..           +......|+.+.
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~---~~~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f~   78 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEA---DSAP--HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   78 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGG---GGCS--EEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecC---CCCc--eEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEEEE
Confidence            577999999999999999988898765332   1222  344554678899998732           123467899999


Q ss_pred             cC---CHHHHHHHHHHhcCCeEe
Q 024414          238 VG---DLDRSINFYEQAFGMELL  257 (268)
Q Consensus       238 v~---d~~~s~~FY~~vlG~~~~  257 (268)
                      |.   |++++.+...+ .|.++.
T Consensus        79 v~~~~dv~~~~~~l~~-~G~~~~  100 (138)
T 2a4x_A           79 FPDTASVDKKYAELVD-AGYEGH  100 (138)
T ss_dssp             CSSHHHHHHHHHHHHH-TTCCEE
T ss_pred             eCCHHHHHHHHHHHHH-CCCcee
Confidence            99   88888777766 577654

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=96.15  E-value=0.0024  Score=47.06  Aligned_cols=29  Identities=17%  Similarity=0.318  Sum_probs=26.3

Q ss_pred             CceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          230 PLCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       230 ~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      .+ |+.|.|.|++++.+||+++|||++...
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~   36 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMD   36 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEE
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEec
Confidence            46 999999999999999999999998664

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=96.13  E-value=0.031  Score=42.10  Aligned_cols=85  Identities=16%  Similarity=0.127  Sum_probs=57.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC--------CCCceeEEEEc-
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVMLRV-  238 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~--------~~~l~~v~L~v-  238 (268)
                      ++.|+++.|.|++++.+...+ .|.++..... .+.+....+++ . +|..++|++....        ...+.|+.+.| 
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~-~-~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~v~   81 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGR-GDTTSFAHGVL-P-GGLSIVLREHDGGGTDLFDETRPGLDHLSFSVE   81 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEE-CSSEEEEEEEC-T-TSCEEEEEEETTCSSSCCCTTSSEEEEEEEEES
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeecc-CCCCceEEEEE-c-CCCEEEEEeCCCCcccCCCCCCCCcceEEEEeC
Confidence            567999999999999999976 7998764322 11111222333 4 7889999987532        23467999999 


Q ss_pred             --CCHHHHHHHHHHhcCCeEe
Q 024414          239 --GDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       239 --~d~~~s~~FY~~vlG~~~~  257 (268)
                        .|++++.+...+ .|.++.
T Consensus        82 ~~~d~~~~~~~l~~-~G~~~~  101 (136)
T 2rk0_A           82 SMTDLDVLEERLAK-AGAAFT  101 (136)
T ss_dssp             SHHHHHHHHHHHHH-HTCCBC
T ss_pred             CHHHHHHHHHHHHH-CCCccc
Confidence              677777776655 576654

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=95.89  E-value=0.098  Score=38.84  Aligned_cols=90  Identities=14%  Similarity=0.244  Sum_probs=58.9

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC-CCCceeEEEEcC--CHHH
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-PEPLCQVMLRVG--DLDR  243 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~-~~~l~~v~L~v~--d~~~  243 (268)
                      .++.|+.+.|.|++++.+...+ .|.+................++.- +|..+++.+.... ...+.|+.+.|.  |+++
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~h~~~~v~~~d~~~   81 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLI-AGLWICIMEGDSLQERTYNHIAFQIQSEEVDE   81 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEE-TTEEEEEEECSSCCCCCSCEEEEECCGGGHHH
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEe-CCEEEEEecCCCCCCCCeeEEEEEcCHHHHHH
Confidence            3678999999999999999877 898875432111000000013332 5678888876543 356789999995  8998


Q ss_pred             HHHHHHHhcCCeEeee
Q 024414          244 SINFYEQAFGMELLRK  259 (268)
Q Consensus       244 s~~FY~~vlG~~~~~~  259 (268)
                      +.+...+ .|.++...
T Consensus        82 ~~~~l~~-~G~~~~~~   96 (133)
T 2p7o_A           82 YTERIKA-LGVEMKPE   96 (133)
T ss_dssp             HHHHHHH-HTCCEECC
T ss_pred             HHHHHHH-CCCcccCC
Confidence            8888866 57776543

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=95.82  E-value=0.0069  Score=45.97  Aligned_cols=29  Identities=17%  Similarity=0.445  Sum_probs=25.7

Q ss_pred             ceeEEEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          231 LCQVMLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       231 l~~v~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      -.+..|.|.|++++++||+++|||++..+
T Consensus         8 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~   36 (134)
T 3fcd_A            8 QITPFLHIPDMQEALTLFCDTLGFELKYR   36 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             cceeEEEECCHHHHHHHHHhccCcEEEEe
Confidence            45678999999999999999999998765

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=95.75  E-value=0.092  Score=39.60  Aligned_cols=86  Identities=10%  Similarity=0.094  Sum_probs=59.2

Q ss_pred             CeeEEEEEECCHHHHHHHHH-HcCCeEeeCCcccCCCCeEEEEEECCCC-CEEEEEEeCCC-----CCCceeEEEEcCCH
Q 024414          169 GFGHFGIAVDDVAKTVELIK-AKGGKVTREPGPVKGGNTVIAFIEDPDG-YKFELLERGPT-----PEPLCQVMLRVGDL  241 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~-~~G~~i~~~p~~~~~G~~~~~~~~DPdG-~~iEl~e~~~~-----~~~l~~v~L~v~d~  241 (268)
                      .+.||++.|.|+++..+... ..|.++......  .+....+++..+++ ..+++.+....     ...+.|+.+.|.|+
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d~   88 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ--HNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNA   88 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE--ETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEECCCH
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC--CCCeeEEEEecCCCceEEEEeecCCCCCCCCCCCccEEEEEeCCc
Confidence            45689999999999999985 579887543211  12345677777654 45788765321     24568999999999


Q ss_pred             ---HHHHHHHHHhcCCeEe
Q 024414          242 ---DRSINFYEQAFGMELL  257 (268)
Q Consensus       242 ---~~s~~FY~~vlG~~~~  257 (268)
                         +++.+..++ .|.++.
T Consensus        89 ~~l~~~~~~l~~-~G~~~~  106 (139)
T 1twu_A           89 VELAAITSKLKH-MGYQEV  106 (139)
T ss_dssp             HHHHHHHHHHHH-TTCCEE
T ss_pred             chHHHHHHHHHH-cCCcCc
Confidence               666666655 577655

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=95.65  E-value=0.012  Score=50.29  Aligned_cols=130  Identities=8%  Similarity=0.045  Sum_probs=77.6

Q ss_pred             CCcccccccCcccccccccccccccccccccC---hhHHhhhcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC
Q 024414           58 AAKPLRGDVNSTGVASSAGNAAQASTSAAHES---ALEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE  134 (268)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~  134 (268)
                      |-++..++||+..+-+- ...+.-......++   ...|.-=..-.+ ||.|.|.|.+++  ||.+ +|+      +.  
T Consensus       108 A~yl~dPEGn~ieiyae-~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I~LnV~d~~~s--Fy~~-~~~------~~--  174 (244)
T 3e0r_A          108 AFEIFSPEDDLILIHAE-DDIASLVEVGEKPEFQTDLASISLSKFEI-SMELHLPTDIES--FLES-SEI------GA--  174 (244)
T ss_dssp             EEEEECTTCCEEEEECC-SCGGGCEECSSCCCCCCCCSCCCCSSEEE-EEEEEECTTCCC--SCCH-HHH------TT--
T ss_pred             EEEEECCCCCeEEEEEc-CCHHHhhcccchhhccccccccCCCCcEE-EEEEEcCchHHH--Hhhc-cCC------cc--
Confidence            67899999999988653 22222111101111   111211123357 999999999998  9986 444      10  


Q ss_pred             CceeEEEEeeCCCCceEEEEEeeccCC-CCCCCCCCeeEEEEEEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEE
Q 024414          135 EKYTNAFLGYGPEDSHFVIELTYNYGV-DKYDIGTGFGHFGIAVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI  211 (268)
Q Consensus       135 ~~~~~~~l~~g~~~~~~~lel~~~~~~-~~~~~g~g~~hi~f~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~  211 (268)
                         ...|...            .+.+. .+....-|+..+-|.|+  |+.++.++|.++|.-+.     .   ....+.+
T Consensus       175 ---~~~F~~a------------~G~dl~~~~~~t~gLe~l~~~v~~~dl~~l~~~L~~~g~~id-----k---k~~~l~~  231 (244)
T 3e0r_A          175 ---SLDFIPA------------QGQDLTVDNTVTWDLSMLKFLVNELDIASLRQKFESTEYFIP-----K---SEKFFLG  231 (244)
T ss_dssp             ---TEEEEEC------------CCTTTTCCTTSBSSEEEEEEEESSCCHHHHHHHTTTSCEECC-----T---TCCEEEE
T ss_pred             ---cEEEEcc------------cCCCCCCCCCCccCceEEEEEeCHHHHHHHHHHHHhCCceEc-----c---cCCEEEE
Confidence               1223322            11111 12223448888888886  58899999998876331     1   2346889


Q ss_pred             ECCCCCEEEEEE
Q 024414          212 EDPDGYKFELLE  223 (268)
Q Consensus       212 ~DPdG~~iEl~e  223 (268)
                      .||.|+.|.|.+
T Consensus       232 ~DpsgIeiwF~~  243 (244)
T 3e0r_A          232 KDRNNVELWFEE  243 (244)
T ss_dssp             ECTTSCEEEEEE
T ss_pred             ECCCCCEEEEEE
Confidence            999999998875

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=95.50  E-value=0.035  Score=47.51  Aligned_cols=82  Identities=11%  Similarity=0.057  Sum_probs=50.4

Q ss_pred             CeeEEEEEEC-CHHHHHHHHHHcCCeEeeCCccc--CCCCeEEEEEECCCCCEEEEEEeCC---CCCCceeEEEEcCCHH
Q 024414          169 GFGHFGIAVD-DVAKTVELIKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP---TPEPLCQVMLRVGDLD  242 (268)
Q Consensus       169 g~~hi~f~V~-Did~~~~~L~~~G~~i~~~p~~~--~~G~~~~~~~~DPdG~~iEl~e~~~---~~~~l~~v~L~v~d~~  242 (268)
                      |+..|.+.|. +=....+.+++.|++........  ..|.         |-..+++....-   .+....+..|.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            5666777664 33456677788898775432211  1121         122334433321   1223457888999999


Q ss_pred             HHHHHHHHhcCCeEeee
Q 024414          243 RSINFYEQAFGMELLRK  259 (268)
Q Consensus       243 ~s~~FY~~vlG~~~~~~  259 (268)
                      ++.+||+++|||++...
T Consensus       196 ~a~~FY~~~lG~~~~~~  212 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFA  212 (301)
T ss_dssp             HHHHHHHHHSCCEEEEE
T ss_pred             HHHHHHHHhcCCeEeee
Confidence            99999999999998643

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=95.36  E-value=0.21  Score=37.37  Aligned_cols=81  Identities=15%  Similarity=0.236  Sum_probs=58.2

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC---CCCCCceeEEEEcC--CHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG---PTPEPLCQVMLRVG--DLD  242 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~---~~~~~l~~v~L~v~--d~~  242 (268)
                      ++.|+.+.|.|++++.+...+ .|.++....   +.  .  .++.. +|..+++.+..   .....+.|+.+.|.  |++
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~--~--~~~~~-~~~~l~l~~~~~~~~~~~~~~h~~~~v~~~d~~   75 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARW---DQ--G--AYLEL-GSLWLCLSREPQYGGPAADYTHYAFGIAAADFA   75 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE---TT--E--EEEEE-TTEEEEEEECTTCCCCCSSSCEEEEEECHHHHH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcC---CC--c--eEEec-CCEEEEEEeCCCCCCCCCCcceEEEEccHHHHH
Confidence            577999999999999999987 898876431   11  1  33443 45678888763   23346789999997  888


Q ss_pred             HHHHHHHHhcCCeEee
Q 024414          243 RSINFYEQAFGMELLR  258 (268)
Q Consensus       243 ~s~~FY~~vlG~~~~~  258 (268)
                      ++.+...+ .|.++..
T Consensus        76 ~~~~~l~~-~G~~~~~   90 (135)
T 1nki_A           76 RFAAQLRA-HGVREWK   90 (135)
T ss_dssp             HHHHHHHH-TTCCEEE
T ss_pred             HHHHHHHH-CCCceec
Confidence            88888766 6777644

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=95.03  E-value=0.16  Score=39.22  Aligned_cols=81  Identities=12%  Similarity=0.121  Sum_probs=54.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC------CCCCceeEEEEcCC-
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------TPEPLCQVMLRVGD-  240 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~------~~~~l~~v~L~v~d-  240 (268)
                      ++.|+.+.|.|++++.+...+ .|.++....    .   ..+++.-++|..+.++....      ......|+.+.|.| 
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~----~---~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~~~l~f~v~d~   78 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESS----P---TFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSN   78 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEEC----S---SEEEEECTTSCEEEEEEGGGCSSCCC----CEEEEEECSCH
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccC----C---CEEEEEcCCCcEEEEecCCcCCccccCCCCeEEEEEEcCCH
Confidence            678999999999999999887 898764331    1   13456656889999987542      12346789999988 


Q ss_pred             --HHHHHHHHHHhcCCeEe
Q 024414          241 --LDRSINFYEQAFGMELL  257 (268)
Q Consensus       241 --~~~s~~FY~~vlG~~~~  257 (268)
                        ++++.+...+ .|.++.
T Consensus        79 ~dvd~~~~~l~~-~G~~i~   96 (148)
T 3rhe_A           79 EMVDEIHRQWSD-KEISII   96 (148)
T ss_dssp             HHHHHHHHHHHH-TTCCEE
T ss_pred             HHHHHHHHHHHh-CCCEEE
Confidence              5555554433 677654

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=94.88  E-value=0.22  Score=37.56  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=58.3

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC------CCCCceeEEEEcC--
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------TPEPLCQVMLRVG--  239 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~------~~~~l~~v~L~v~--  239 (268)
                      ++.|+++.|.|++++.+...+ .|.++....   +  ..  .++.. +|..++|.+...      ....+.|+.+.|.  
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~--~~--~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~hi~~~v~~~   75 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARW---N--TG--AYLTC-GDLWVCLSYDEARQYVPPQESDYTHYAFTVAEE   75 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEE---T--TE--EEEEE-TTEEEEEEECTTCCCCCGGGSCSCEEEEECCHH
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeec---C--Cc--EEEEE-CCEEEEEEECCCCCCCCCCCCCceEEEEEeCHH
Confidence            578999999999999999987 898875431   1  11  34443 466788887642      1245789999996  


Q ss_pred             CHHHHHHHHHHhcCCeEee
Q 024414          240 DLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       240 d~~~s~~FY~~vlG~~~~~  258 (268)
                      |++++.+...+ .|.++..
T Consensus        76 d~~~~~~~l~~-~G~~~~~   93 (141)
T 1npb_A           76 DFEPLSQRLEQ-AGVTIWK   93 (141)
T ss_dssp             HHHHHHHHHHH-TTCCEEE
T ss_pred             HHHHHHHHHHH-CCCeEec
Confidence            88888888766 6777544

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=94.82  E-value=0.024  Score=45.11  Aligned_cols=30  Identities=27%  Similarity=0.383  Sum_probs=24.7

Q ss_pred             ceeEEEEcCC--HHHHHHHHHHhcCCeEeeee
Q 024414          231 LCQVMLRVGD--LDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       231 l~~v~L~v~d--~~~s~~FY~~vlG~~~~~~~  260 (268)
                      -.|..|.|.|  ++++++||+++|||++....
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~   56 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHS   56 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEE
Confidence            3688899999  99999999999999987543

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=94.77  E-value=0.43  Score=36.38  Aligned_cols=81  Identities=12%  Similarity=0.127  Sum_probs=57.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC----------CCCCceeEEEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------TPEPLCQVMLR  237 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~----------~~~~l~~v~L~  237 (268)
                      ++.|+.|.|.|++++.+...+ .|.++....     +.  .+++.. +|..++|++...          ......|+.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-----~~--~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~   76 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN-----PE--IIFYQM-NGFVLATWLVQNLQEDVGVAVTSRPGSMALAHN   76 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC-----SS--EEEEEC-SSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEE
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC-----CC--EEEEEc-CCEEEEEEeccccccccCCCCCCCCCeEEEEEE
Confidence            577999999999999999987 898764331     22  244554 688999997531          13456789999


Q ss_pred             c---CCHHHHHHHHHHhcCCeEee
Q 024414          238 V---GDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       238 v---~d~~~s~~FY~~vlG~~~~~  258 (268)
                      |   .|++++.+...+ .|.++..
T Consensus        77 v~~~~dv~~~~~~l~~-~G~~~~~   99 (150)
T 3bqx_A           77 VRAETEVAPLMERLVA-AGGQLLR   99 (150)
T ss_dssp             CSSGGGHHHHHHHHHH-TTCEEEE
T ss_pred             eCCHHHHHHHHHHHHH-CCCEEec
Confidence            9   677777777655 6777643

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=94.20  E-value=0.47  Score=34.93  Aligned_cols=76  Identities=12%  Similarity=0.165  Sum_probs=56.3

Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC--CCCCceeEEEEcCCHHHHHHHH
Q 024414          171 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--TPEPLCQVMLRVGDLDRSINFY  248 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~--~~~~l~~v~L~v~d~~~s~~FY  248 (268)
                      .++.+.|.|+++..+..++.|.++...     .+.  .+++.. +|..++|.+...  ......|+.+.|.|++++.+..
T Consensus         5 ~~~~l~v~D~~~a~~FY~~LG~~~~~~-----~~~--~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~v~dv~~~~~~l   76 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYERLGFGIVFR-----DAG--WMILQR-GDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQC   76 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHTTTCEEEEE-----CSS--EEEEEE-TTEEEEEEECTTCCGGGCCCEEEEEESCHHHHHHHH
T ss_pred             EEEEEEeCCHHHHHHHHHHCCCEEEec-----CCC--EEEEEe-CCEEEEEEeCCCCCCCCcceEEEEEECCHHHHHHHH
Confidence            478999999999999998899887643     111  233443 466788887543  1245679999999999999998


Q ss_pred             HHhcCCe
Q 024414          249 EQAFGME  255 (268)
Q Consensus       249 ~~vlG~~  255 (268)
                      .+ .|.+
T Consensus        77 ~~-~G~~   82 (126)
T 1ecs_A           77 KS-VGIQ   82 (126)
T ss_dssp             HH-TTCC
T ss_pred             HH-CCCc
Confidence            77 5776

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=93.86  E-value=0.11  Score=40.40  Aligned_cols=83  Identities=11%  Similarity=0.172  Sum_probs=56.0

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---------C----CCcee
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------P----EPLCQ  233 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---------~----~~l~~  233 (268)
                      .++.|+++.|.|++++.+...+ .|.++.....    +.  ..++.. .+..+++++....         +    ..+.|
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~--~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~h   79 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP----GQ--LVFFKC-GRQMLLLFDPQESSRADANNPIPRHGAVGQGH   79 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET----TT--EEEEEE-TTEEEEEECHHHHTCCCTTCCSCCCEEEEECE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC----Cc--EEEEeC-CCEEEEEEecCCccCccccCCCCcCCCcceeE
Confidence            5788999999999999999988 8998764311    11  234443 4566777753321         1    23589


Q ss_pred             EEEEc---CCHHHHHHHHHHhcCCeEee
Q 024414          234 VMLRV---GDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       234 v~L~v---~d~~~s~~FY~~vlG~~~~~  258 (268)
                      +.+.|   .|++++.+...+ .|.++..
T Consensus        80 i~f~V~~~~dld~~~~~l~~-~G~~~~~  106 (160)
T 3r4q_A           80 FCFYADDKAEVDEWKTRFEA-LEIPVEH  106 (160)
T ss_dssp             EEEEESSHHHHHHHHHHHHT-TTCCCCE
T ss_pred             EEEEeCCHHHHHHHHHHHHH-CCCEEec
Confidence            99999   667777666654 5776643

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=91.01  E-value=1.4  Score=33.33  Aligned_cols=79  Identities=18%  Similarity=0.181  Sum_probs=51.7

Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC------------CCCCCceeEEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG------------PTPEPLCQVML  236 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~------------~~~~~l~~v~L  236 (268)
                      -+.||.+.|.|+++..+...+.|+.....   ..++. . .++....+..+.+....            +......|+.+
T Consensus         9 rl~~V~L~V~Dl~~s~~FY~~lg~~~~~~---~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   83 (149)
T 4gym_A            9 RLTFVNLPVADVAASQAFFGTLGFEFNPK---FTDES-C-ACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVCV   83 (149)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHTTCEECGG---GCBTT-E-EEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEE
T ss_pred             cEEEEEEEeCCHHHHHHHHHHhCCCccee---ecCCc-e-eEEeecCcceEeeeccccccccccccCCCCCCCCeeEEEE
Confidence            46799999999999999999988765422   11222 2 33333444455454422            11234569999


Q ss_pred             EcCCHHHHHHHHHHhc
Q 024414          237 RVGDLDRSINFYEQAF  252 (268)
Q Consensus       237 ~v~d~~~s~~FY~~vl  252 (268)
                      .+.+.+...++|+++.
T Consensus        84 ~v~~~~~vd~~~~~~~   99 (149)
T 4gym_A           84 SAIDRDDVDRFADTAL   99 (149)
T ss_dssp             ECSSHHHHHHHHHHHH
T ss_pred             EeccHHHHHHHHHHHH
Confidence            9998888888887754

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=89.98  E-value=3.5  Score=30.55  Aligned_cols=82  Identities=10%  Similarity=0.035  Sum_probs=52.5

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe----------C-CCCCCceeEEE
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER----------G-PTPEPLCQVML  236 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~----------~-~~~~~l~~v~L  236 (268)
                      .+.|+.|.|.|++++.+...+ .|.++....   ..+.  ...+.. +|..+.+.+.          . +....-.|+.+
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~f   81 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESI---RSPI--FRGLDT-GKSCIGFNAHEAYELMQLAQFSETSGIKFLLNF   81 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGG---CBTT--EEEEEC-SSSEEEEECTHHHHHTTCGGGCCCBSCCEEEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeeccc---CCCc--eEEeec-CCEEEEEcCccccccccccccCCCCCCeEEEEE
Confidence            678999999999999999987 898875321   1111  233443 5677776542          0 11122248999


Q ss_pred             EcCC---HHHHHHHHHHhcCCeEe
Q 024414          237 RVGD---LDRSINFYEQAFGMELL  257 (268)
Q Consensus       237 ~v~d---~~~s~~FY~~vlG~~~~  257 (268)
                      .|.|   ++++.+..++ .|.++.
T Consensus        82 ~v~~~~dv~~~~~~l~~-~G~~~~  104 (141)
T 2rbb_A           82 DVDTKEAVDKLVPVAIA-AGATLI  104 (141)
T ss_dssp             ECSCHHHHHHHHHHHHH-TTCEEE
T ss_pred             EcCCHHHHHHHHHHHHH-cCCeEe
Confidence            9995   6666666654 677654

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=89.57  E-value=4.8  Score=29.52  Aligned_cols=82  Identities=18%  Similarity=0.223  Sum_probs=55.9

Q ss_pred             EEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC------CCCce-eEEEEcCCHHH
Q 024414          172 HFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------PEPLC-QVMLRVGDLDR  243 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~------~~~l~-~v~L~v~d~~~  243 (268)
                      .+.+.|.|++++.+..++ .|.++..... .+ |....+.+. .+|..+.+.+..+.      ..... |+.+.|.|+++
T Consensus         5 ~i~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~-g~~~~~~l~-~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv~~   81 (137)
T 3itw_A            5 VVELAYTDPDRAVDWLVRVFGFRLLLRQP-AI-GTIRHADLD-TGGGIVMVRRTGEPYTVSCAGGHTCKQVIVWVSDVDE   81 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHHHCCEEEEEES-SS-SSCSEEEEE-CSSSEEEEEETTCCSSCEECCCCCCCEEEEEESCHHH
T ss_pred             EEEEEECCHHHHHHHHHHccCCEEEEEec-CC-CcEEEEEEe-cCCeEEEEEecCCCcCccCCCCCcEEEEEEEeCCHHH
Confidence            689999999999999987 8998764311 11 222234344 35677888765432      12234 89999999999


Q ss_pred             HHHHHHHhcCCeEe
Q 024414          244 SINFYEQAFGMELL  257 (268)
Q Consensus       244 s~~FY~~vlG~~~~  257 (268)
                      ..+-..+ .|.++.
T Consensus        82 ~~~~l~~-~G~~~~   94 (137)
T 3itw_A           82 HFMRSTA-AGADIV   94 (137)
T ss_dssp             HHHHHHH-TTCEEE
T ss_pred             HHHHHHH-cCCeec
Confidence            9988866 677654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=87.35  E-value=1.9  Score=37.27  Aligned_cols=33  Identities=9%  Similarity=0.251  Sum_probs=30.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRK  129 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~  129 (268)
                      ...+|.+|+|.++|.+++.+.|.++||.+....
T Consensus       187 Ga~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          187 KQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             TTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            467999999999999999999999999998754

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=86.76  E-value=0.62  Score=37.43  Aligned_cols=29  Identities=14%  Similarity=0.423  Sum_probs=23.0

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCeEeeeecC
Q 024414          234 VMLRVGDLDRSINFYEQAFGMELLRKRDN  262 (268)
Q Consensus       234 v~L~v~d~~~s~~FY~~vlG~~~~~~~~~  262 (268)
                      -.|.+.|.+++++||.++||+++..+..+
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~   57 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEV   57 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEc
Confidence            45566799999999999999997655433

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=86.58  E-value=1.5  Score=32.43  Aligned_cols=78  Identities=15%  Similarity=0.191  Sum_probs=52.7

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEE-----EE------e--CCCCCCceeE
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL-----LE------R--GPTPEPLCQV  234 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl-----~e------~--~~~~~~l~~v  234 (268)
                      .+.|+.+.|.|++++.+...+ .|.++....     +. . +.+.  .|..+..     ..      .  .+......|+
T Consensus         8 ~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~-----~~-~-~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (141)
T 2qnt_A            8 RFVNPIPFVRDINRSKSFYRDRLGLKILEDF-----GS-F-VLFE--TGFAIHEGRSLEETIWRTSSDAQEAYGRRNMLL   78 (141)
T ss_dssp             CCCCCCCEESCHHHHHHHHHHTTCCCEEEEC-----SS-E-EEET--TSCEEEEHHHHHHHHHSCCC--CCCSCCSSCEE
T ss_pred             ccceEEEEECCHHHHHHHHHHhcCCEEEEEc-----CC-c-EEEe--ccceeccCchhhhhccccCCccccccCCCceEE
Confidence            567999999999999999988 898876431     12 1 3332  3555431     11      1  1223467899


Q ss_pred             EEEcCCHHHHHHHHHHhcCCeEe
Q 024414          235 MLRVGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       235 ~L~v~d~~~s~~FY~~vlG~~~~  257 (268)
                      .+.|.|++++.+...+  |.++.
T Consensus        79 ~~~v~dv~~~~~~l~~--G~~~~   99 (141)
T 2qnt_A           79 YFEHADVDAAFQDIAP--HVELI   99 (141)
T ss_dssp             EEEESCHHHHHC-CGG--GSCEE
T ss_pred             EEEeCcHHHHHHHHHc--CCccc
Confidence            9999999999988877  87753

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=86.35  E-value=4.5  Score=30.61  Aligned_cols=81  Identities=20%  Similarity=0.197  Sum_probs=53.1

Q ss_pred             EEEEEECCHHHHHHHHH-HcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC---CCCCceeEEEEcCCHHHHHHH
Q 024414          172 HFGIAVDDVAKTVELIK-AKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---TPEPLCQVMLRVGDLDRSINF  247 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~-~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~---~~~~l~~v~L~v~d~~~s~~F  247 (268)
                      ++.+.|.|++++.+... -.|.++..... .+.+..... ...  +  ++++....   .+....|+.+.|.|++++.+.
T Consensus         9 ~i~l~v~Dl~~a~~FY~~vLG~~~~~~~~-~~~~~~~~~-~~~--~--~~l~~~~~~~~~~~~~~hl~f~V~d~d~~~~~   82 (144)
T 3r6a_A            9 LSRLYVADLNPALEFYEELLETPVAMRFE-IPQTGVELA-QIS--T--ILLIAGSEEALKPFRNTQATFLVDSLDKFKTF   82 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHTTCCCCEECC-CSCSSCEEE-EET--T--EEEEESCHHHHGGGGGCCEEEEESCHHHHHHH
T ss_pred             EEEEEECCHHHHHHHHHHhcCCEEEEEec-cCCccEEEE-Eec--c--EEEecCCcccCCCCcceEEEEEeCCHHHHHHH
Confidence            48999999999999885 57877643311 122222222 222  1  66766542   234568999999999999998


Q ss_pred             HHHhcCCeEeee
Q 024414          248 YEQAFGMELLRK  259 (268)
Q Consensus       248 Y~~vlG~~~~~~  259 (268)
                      .++ .|.++...
T Consensus        83 l~~-~G~~v~~~   93 (144)
T 3r6a_A           83 LEE-NGAEIIRG   93 (144)
T ss_dssp             HHH-TTCEEEEE
T ss_pred             HHH-cCCEEecC
Confidence            876 68876443

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=86.32  E-value=7  Score=29.03  Aligned_cols=79  Identities=11%  Similarity=0.045  Sum_probs=51.5

Q ss_pred             EEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC--C-----------CCCCceeEEEE
Q 024414          172 HFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG--P-----------TPEPLCQVMLR  237 (268)
Q Consensus       172 hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~--~-----------~~~~l~~v~L~  237 (268)
                      .+.+.|.|+++..+...+ .|.++.....   .+.  .+++.. +|..++|.+..  +           ....+. +.+.
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~~--~~~l~~-g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~~~~   80 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERP---DEE--FVYLTL-DGVDVMLEGIAGKSRKWLSGDLEFPLGSGVN-FQWD   80 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEG---GGT--EEEEEE-TTEEEEEEEC-----------CCSSTTTTEE-EEEE
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecC---CCC--EEEEEc-CCeEEEEEeccCCCcccccCccccCCCCceE-EEEE
Confidence            589999999999999966 8998763211   111  233443 56677777641  1           112233 8899


Q ss_pred             cCCHHHHHHHHHHhcCCeEe
Q 024414          238 VGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~  257 (268)
                      |.|++++.+..++..|.++.
T Consensus        81 v~dvd~~~~~l~~~~G~~~~  100 (145)
T 2rk9_A           81 VIDIEPLYQRVNESAADSIY  100 (145)
T ss_dssp             CSCHHHHHHHHHHHHGGGEE
T ss_pred             ECCHHHHHHHHHhhCCCeEe
Confidence            99999999888763555543

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=84.55  E-value=0.78  Score=35.23  Aligned_cols=27  Identities=22%  Similarity=0.471  Sum_probs=21.1

Q ss_pred             EEEEcC-CHHHHHHHHHHhcC-CeEeeee
Q 024414          234 VMLRVG-DLDRSINFYEQAFG-MELLRKR  260 (268)
Q Consensus       234 v~L~v~-d~~~s~~FY~~vlG-~~~~~~~  260 (268)
                      -.|.+. |.+++++||+++|| .++.+..
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~   41 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSIS   41 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEE
Confidence            345565 89999999999999 6776543

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=84.22  E-value=7.7  Score=31.53  Aligned_cols=78  Identities=15%  Similarity=0.143  Sum_probs=49.4

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCC-EEEEEecCCCCceeEEEE----eeCCCCceEEEEEeeccCCCCCCCCCCeeE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFL----GYGPEDSHFVIELTYNYGVDKYDIGTGFGH  172 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~-~~~~~~~~~~~~~~~~~l----~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  172 (268)
                      ...++||+++|.+.+.|.+|-+..+-. ++.......+.....+-+    .+++.. .-++|+.++.. ..|.. .|--|
T Consensus        41 ~~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~-I~cvELP~P~~-K~Yp~-eGWEH  117 (192)
T 1k4n_A           41 PLTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQ-FSIVELPWPGE-KRYPH-EGWEH  117 (192)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEE-EEEEEEECCCS-SCCSS-CEEEE
T ss_pred             hccCcEEEEecCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCeE-EEEEEcCCCCC-CCCCC-CCceE
Confidence            457999999999999999999998753 444443333322222222    233322 23577777553 33443 68889


Q ss_pred             EEEEEC
Q 024414          173 FGIAVD  178 (268)
Q Consensus       173 i~f~V~  178 (268)
                      |-|.++
T Consensus       118 IE~Vlp  123 (192)
T 1k4n_A          118 IEIVLP  123 (192)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999997

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=84.17  E-value=19  Score=36.37  Aligned_cols=51  Identities=16%  Similarity=0.184  Sum_probs=36.8

Q ss_pred             eEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          171 GHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       171 ~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ..+.|.+.|++++.+.|.+..+..  .|.+..   ...+|..||=||.+.|.....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEI--IPSKID---LVEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCB--CCCC-----CCCEEEESSSEEEEECCSSSC
T ss_pred             ceEEEEeCcHHHHHHHhhhccccc--CCCCCC---ceeEEEecCCCCEEeeecCCC
Confidence            468999999999999999873322  222221   234899999999999986553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	268
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-31
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	9e-07
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	9e-28
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	5e-06
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-25
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-08
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-19
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	7e-05
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-18
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-04
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-18
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	2e-18
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	1e-17
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	8e-17
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	1e-16
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	6e-05
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	3e-16
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	7e-16
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	0.004
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	7e-16
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	3e-05
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	4e-15
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	6e-04
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	9e-15
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-14
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	0.004
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	8e-04
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-11
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	0.004
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-04
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-11
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	3e-11
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	6e-11
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	2e-10
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	2e-10
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-09
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-09
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	3e-09
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	9e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-08
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-04
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	4e-08
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-07
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-06
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	0.003
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	4e-06
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.003
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	7e-06
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	2e-05
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	3e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	1e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  109 bits (273), Expect = 8e-31
 Identities = 80/132 (60%), Positives = 98/132 (74%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+LH + RVGDL R+I FYT+ LGMKLLR  + PE KY+ AF+GYGPE    VIELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
           GVDKY++GT +GH  ++VD+ A+  E I+  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 220 ELLERGPTPEPL 231
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 45.1 bits (105), Expect = 9e-07
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
            MLRVGDL RSI+FY +  GM+LLR  +NPEY
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEY 37

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score =  102 bits (253), Expect = 9e-28
 Identities = 68/132 (51%), Positives = 82/132 (62%), Gaps = 5/132 (3%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           RRMLH + RVGDLDR+IKFYTE LGMK+LRK D+PE+KYT  FLGYGPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
           YGV  Y     +GH  I V+DV + V  ++     +  E          +AF+ DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGF-----MAFVVDPDGYY 116

Query: 219 FELLERGPTPEP 230
            ELL      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 43.1 bits (100), Expect = 5e-06
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
            M+RVGDLDRSI FY +  GM++LRK D PE 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPED 38

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (239), Expect = 3e-25
 Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 26/153 (16%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF-------- 151
            +   + RV D  +++ FYT  LGM L++K D P  K++  FL Y  ++           
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 152 -------VIELTYNYGVDKYD---------IGTGFGHFGIAVDDVAKTVELIKAKGGKVT 195
                   +ELT+N+G +  +            GFGH GIAV DV    +  +  G K  
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 196 REPGPVKGGNTVIAFIEDPDGYKFELLERGPTP 228
           ++P    G    +AFI+DPDGY  E+L      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 8e-08
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 225 GPTPEP----LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
              P      L Q MLRV D  +S++FY +  GM L++K D P  K 
Sbjct: 14  DADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKF 60

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 79.6 bits (195), Expect = 2e-19
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 8/124 (6%)

Query: 101 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYG 160
            + +    G LD  I+FY E L +K + +            + +G   + + +E T   G
Sbjct: 10  QIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYD---GVMFGLPHADYHLEFTQYEG 66

Query: 161 VDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 217
                +          V    ++A     +K  G +      P          IEDPDG+
Sbjct: 67  GSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGW 124

Query: 218 KFEL 221
           +   
Sbjct: 125 RIVF 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 39.5 bits (91), Expect = 7e-05
 Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 4/42 (9%)

Query: 231 LCQVMLRV----GDLDRSINFYEQAFGMELLRKRDNPEYKVL 268
                +R+    G LD  I FYE+   ++ + +         
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDG 47

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 77.7 bits (190), Expect = 1e-18
 Identities = 16/135 (11%), Positives = 33/135 (24%), Gaps = 4/135 (2%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF--VIELT 156
           +   H+     + +    FY   LG++ ++     ++             S    +    
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 157 YNYGVDKYDIGTGFGHFGIAVDDVAKTVE-LIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
                  Y         G+ V           + +   V             + F ED +
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAE 123

Query: 216 GYKFELLERGPTPEP 230
           G +  LL        
Sbjct: 124 GLRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 37.7 bits (86), Expect = 4e-04
 Identities = 3/25 (12%), Positives = 13/25 (52%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLR 258
           + +   + + + +FY+   G+  ++
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVK 34

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 78.3 bits (192), Expect = 2e-18
 Identities = 23/149 (15%), Positives = 43/149 (28%), Gaps = 24/149 (16%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           +R  H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+
Sbjct: 11  KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYS 70

Query: 159 YGVDKYDIG-----------------------TGFGHFGIAVDDVAKTVELIKAKGGKVT 195
             +   +I                         G     I V+D      +  A G   +
Sbjct: 71  PSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPS 130

Query: 196 REPGPVKGGNTVIAFIEDPDGYKFELLER 224
             P  +      IA ++         +  
Sbjct: 131 SPPIVLNEA-VTIAEVKLYGDVVLRYVSY 158

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 78.4 bits (192), Expect = 2e-18
 Identities = 22/143 (15%), Positives = 35/143 (24%), Gaps = 18/143 (12%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
               HV     D       ++  LG  L  + D+      +A L        F+    Y 
Sbjct: 12  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 71

Query: 159 YGVDKYDI-----------------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPV 201
           +G D                     G       + V D         A G +    P  +
Sbjct: 72  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 131

Query: 202 KGGNTVIAFIEDPDGYKFELLER 224
             G   +A +E         +  
Sbjct: 132 GRG-FRLAEVELYGDVVLRYVSY 153

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 1e-17
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 10/140 (7%)

Query: 95  KKDKRRML---HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF 151
           K ++ R L    V + VG+  +   FY   +G + L  + +                  F
Sbjct: 3   KPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF 62

Query: 152 VIELTYNYGVDKYDI-----GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVK--GG 204
           V+    N    +        G G       V+D    V+  + +G K+ REP   +   G
Sbjct: 63  VLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFG 122

Query: 205 NTVIAFIEDPDGYKFELLER 224
               A ++        L+E+
Sbjct: 123 KVKFAVLQTYGDTTHTLVEK 142

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 73.1 bits (178), Expect = 8e-17
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIEL---- 155
            + HV Y   D D   K+Y E  G   L + + PE+      +    + +  + ++    
Sbjct: 7   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 66

Query: 156 ------TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIA 209
                 T    + K++   G  H    VDD+      ++ +G ++  +   +  G   I 
Sbjct: 67  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRIN 126

Query: 210 FI--EDPDGYKFELLE 223
           F+  +   G   EL +
Sbjct: 127 FMHPKSGKGVLIELTQ 142

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 73.0 bits (178), Expect = 1e-16
 Identities = 19/134 (14%), Positives = 37/134 (27%), Gaps = 11/134 (8%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R  H +    +L  T   +T+ LG  L  +           F          +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQF--------LSLSTKAHDV 56

Query: 160 GVDKYDIGTGFGHFGIAVDDV---AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDG 216
               +       H    ++      +  +LI      +   P      +    +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 217 YKFELLERGPTPEP 230
            + E+   G    P
Sbjct: 117 NRNEVFCGGDYNYP 130

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 40.3 bits (93), Expect = 6e-05
 Identities = 3/34 (8%), Positives = 12/34 (35%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
            ++   +L  + + + +  G  L  +  +     
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR 42

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 72.0 bits (175), Expect = 3e-16
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 18/141 (12%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE---------DSH 150
           RM +V   V  LD  I F+ E +G+ L  + ++  E                     D H
Sbjct: 9   RMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGH 67

Query: 151 FVIELTYNYGV-------DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG 203
             IEL+                   G+      V+D+ + V  +   G ++  E    + 
Sbjct: 68  SRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN 127

Query: 204 GNTVIAFIEDPDGYKFELLER 224
               + +I   +G    L E 
Sbjct: 128 SYR-LCYIRGVEGILIGLAEE 147

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 71.0 bits (173), Expect = 7e-16
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 10/136 (7%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           + M  VV+ VG+  +   +Y+   GM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 159 YGVDKYDI--------GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGN--TVI 208
                           G G     I V D           G +   EP  +K  +   V+
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 209 AFIEDPDGYKFELLER 224
           A I      +  L++R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
           V+  VG+  ++ ++Y  AFGM+L+          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSR 44

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 70.3 bits (171), Expect = 7e-16
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 8/120 (6%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTN-AFLGYGPEDSHFVIELTYNYGV 161
           H+ + V DL+R  +        + +   D  +   +   F   G       I +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 162 DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
              +       F I   D  +  E +   G  +      V+G    I +  D D + FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNHMFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 40.7 bits (94), Expect = 3e-05
 Identities = 7/32 (21%), Positives = 12/32 (37%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           +   V DL+R     E  F    +   D  ++
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQF 39

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 68.5 bits (166), Expect = 4e-15
 Identities = 23/127 (18%), Positives = 38/127 (29%), Gaps = 9/127 (7%)

Query: 95  KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIE 154
            K   R  HV  RV D+ + ++ Y E LG+  + + D                      +
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREAD 61

Query: 155 LTYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDP 214
                           G   +  D + +    + A G  V + P             + P
Sbjct: 62  EPGMD---------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAP 112

Query: 215 DGYKFEL 221
            G+ FEL
Sbjct: 113 SGHHFEL 119

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 36.9 bits (84), Expect = 6e-04
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           V LRV D+ +++  Y +  G+  + + D    
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRV 42

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 67.8 bits (164), Expect = 9e-15
 Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 10/135 (7%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R  ++   V DL ++ +FY + LG+ +  + +                  + V+     
Sbjct: 15  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGPI 70

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
             V  +       +   +  +V       K  G +  R       G      +EDP G+ 
Sbjct: 71  AAVAAF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFP 124

Query: 219 FELLERGPTPEPLCQ 233
           +E        E L Q
Sbjct: 125 YEFFYETEHVERLTQ 139

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 66.8 bits (162), Expect = 3e-14
 Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 9/124 (7%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R+ H      D+ R   +  E LG ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDGY 217
            +      T   H  I + D       + A       E GP + G +   ++   DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQICDK------MGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 218 KFEL 221
           + E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 4/34 (11%), Positives = 9/34 (26%), Gaps = 1/34 (2%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKV 267
                 D+ R   + E   G  +     + +   
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVT 41

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 60.7 bits (146), Expect = 3e-12
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           H+   V DL  +I FY + LG +L             A+L  G       + L+      
Sbjct: 7   HLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELG----SLWLCLSREPQYG 56

Query: 163 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
                     FGIA  D A+    ++A G  V         G++   +  DPDG++ E 
Sbjct: 57  GPAADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHRLEA 111

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.4 bits (83), Expect = 8e-04
 Identities = 13/35 (37%), Positives = 15/35 (42%)

Query: 231 LCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           L  + L V DL  SI FY    G  L  + D   Y
Sbjct: 5   LNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAY 39

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 12/131 (9%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           + M  V   V  LD+     TE  G   + + D        A       ++   I + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 159 YGVDKYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
            G  +        H  I V    ++A   E +K +G   +   G +        +  + +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 216 GYKFELLERGP 226
           G  FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (79), Expect = 0.004
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEYKVL 268
           V L V  LD+  +   + FG   + + D       
Sbjct: 16  VELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQS 50

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 58.5 bits (140), Expect = 2e-11
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 11/123 (8%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           + + H+   V DL +++ F+ E LG+           ++         +    +      
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLT-------LHARWNTGAYLTCGDLWVCLSYDEAR 55

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
             V   +       F +A +D     + ++  G  VT        G +   +  DPDG+K
Sbjct: 56  QYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHK 111

Query: 219 FEL 221
            EL
Sbjct: 112 LEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 38.8 bits (89), Expect = 1e-04
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           + L V DL +S+ F+ +  G+ L  + +   Y
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNTGAY 39

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 57.3 bits (137), Expect = 2e-11
 Identities = 21/123 (17%), Positives = 37/123 (30%), Gaps = 13/123 (10%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNY 159
           R +       +  R   FY + LGM              + ++           ++++  
Sbjct: 2   RRVVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFAR 52

Query: 160 GVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 219
              +   GT      I VD+  +    I   G  +   P     G     F+ DP G   
Sbjct: 53  ---EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLI 108

Query: 220 ELL 222
            +L
Sbjct: 109 NIL 111

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 57.7 bits (138), Expect = 3e-11
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 14/125 (11%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
           R + ++ + V D+     F T+ LG+         E   T+    +  +   + I +   
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLM--------EAGTTDNGDLFRIDSRAWRIAVQQ- 53

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 216
               + D     G+       +A+  + +K  G  VT     +     V   I   DP G
Sbjct: 54  ---GEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 217 YKFEL 221
              E+
Sbjct: 111 LPLEI 115

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 56.3 bits (134), Expect = 6e-11
 Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 13/119 (10%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           H+   V D+    +F  +  G+     R        +         +   I         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRD---------NDGFILTLMKGKEV 56

Query: 163 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
           +Y      G    + + V K  + +K  G  V          +    ++E P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 38.2 bits (87), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 234 VMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           + L V D+  +  F E+ FG+     R N   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNAFA 38

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 56.5 bits (136), Expect = 2e-10
 Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 12/136 (8%)

Query: 99  RRMLHVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELT 156
           + + H+ + V  G +     FY +    +  R  DI  E            D    I L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 157 YNYGVDKYDIG--------TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVI 208
                    I          G  H     DD+ KT + +K  G +      P      ++
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM--TAPPDTYYEML 121

Query: 209 AFIEDPDGYKFELLER 224
                  G   + L+ 
Sbjct: 122 EGRLPDHGEPVDQLQA 137

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 55.1 bits (131), Expect = 2e-10
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 4/130 (3%)

Query: 100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-EEKYTNAFLGYGPEDSHFVIELTYN 158
           R+      V D+ ++++FY +            P  E   +  +    +    V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
           +                    V K    +   G +   +P     G    A ++DPDG  
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNV 120

Query: 219 FELLERGPTP 228
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 53.1 bits (126), Expect = 1e-09
 Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN 158
            R+ ++ + V D+     F T+ +G+               A            ++    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 159 YGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 216
               + D     G        + +  + ++  G   TR    +     V+  +  +DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 217 YKFEL 221
              E+
Sbjct: 111 LPLEI 115

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 52.1 bits (124), Expect = 2e-09
 Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 12/121 (9%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
            +   V ++ +        L  K              A            + L+ N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY------ANDGFAQF----TIGSHCLMLSQNHLVP 54

Query: 163 KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 222
             +  +G     I V+DV +  + +   G KV   P     G      ++ P G   +  
Sbjct: 55  LENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFY 112

Query: 223 E 223
            
Sbjct: 113 R 113

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 52.5 bits (125), Expect = 3e-09
 Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
           H V  V D  + + FYTE LG  L    DI     T+    +   +          + + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIP 72

Query: 163 KYDIGTGFGHFGIAV---DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 217
           K        HF +     DDV    + + A G   +   G      T+  + + P   
Sbjct: 73  K-----RIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPM 124

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 52.0 bits (124), Expect = 9e-09
 Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 25/139 (17%)

Query: 99  RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK-----YTNAFLGYGPEDSHF-V 152
            R  H+V  V +L     ++    G     +    +         +  L    E+    +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 153 IELTYNYGVD-------KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGN 205
            E  +             +  G G  H  +A DDV +T+  ++A+      E        
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFE-------- 119

Query: 206 TVIAFIEDPDGYKFELLER 224
               F+  P    ++ + R
Sbjct: 120 ----FMAPPTSDYYDGVRR 134

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 15/120 (12%), Positives = 27/120 (22%), Gaps = 8/120 (6%)

Query: 102 LHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV 161
              V    D+   ++F+T+ LG   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 162 DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 221
           +        G   +  +         +   G    E      G      + DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 37.3 bits (85), Expect = 3e-04
 Identities = 5/31 (16%), Positives = 12/31 (38%)

Query: 235 MLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           +L   D+  ++ F+    G   +   D+   
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAG 39

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 48.4 bits (114), Expect = 4e-08
 Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 20/124 (16%)

Query: 107 RVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDI 166
              D D T  FY   LG  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 167 GTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTV------IAFIEDPDGYKFE 220
              +    + +DD+A+     K+ G + T    P      +      +A + DPDG    
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 221 LLER 224
           L++ 
Sbjct: 115 LIQN 118

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 15/134 (11%), Positives = 34/134 (25%), Gaps = 11/134 (8%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD 162
            + +           + E +G        +   +  N  L Y   + + ++    N    
Sbjct: 12  FIEFASPTPGTLEPIF-EIMGFTK-----VATHRSKNVHL-YRQGEINLILNNEPNSIAS 64

Query: 163 KY--DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 220
            +  + G         V D  K        G +              +  I+   G    
Sbjct: 65  YFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGGAPLY 122

Query: 221 LLERGPTPEPLCQV 234
           L++R      +  +
Sbjct: 123 LIDRFGEGSSIYDI 136

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 16/128 (12%), Positives = 29/128 (22%), Gaps = 9/128 (7%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-------KYTNAFLGYGPEDSHFVIEL 155
            ++     +   + FY    G         P+           ++ L      S  V ++
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDV 68

Query: 156 TYNYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPD 215
           +   G            F +   D    V      G                   + DP 
Sbjct: 69  SSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 127

Query: 216 GYKFELLE 223
           G  +   E
Sbjct: 128 GVTWIFAE 135

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 6/33 (18%), Positives = 14/33 (42%)

Query: 233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
            +++    +  ++ FY+ AFG         P+ 
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKR 42

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 43.2 bits (100), Expect = 4e-06
 Identities = 14/124 (11%), Positives = 27/124 (21%), Gaps = 8/124 (6%)

Query: 98  KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTY 157
           K      V    D+   + F+ + LG +                  +     H ++    
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNT 62

Query: 158 NYGVDKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 217
           +  ++  D       +                  G      G    G      + DP G 
Sbjct: 63  SAWIEVTDPDALHEEW------ARAVSTDYADTSGPAMTPVGESPAGRE--FAVRDPAGN 114

Query: 218 KFEL 221
               
Sbjct: 115 CVHF 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 34.3 bits (77), Expect = 0.003
 Identities = 5/31 (16%), Positives = 12/31 (38%)

Query: 235 MLRVGDLDRSINFYEQAFGMELLRKRDNPEY 265
           +L   D+  +++F+    G E      +   
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEKDFGDRDFAG 40

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 7e-06
 Identities = 16/114 (14%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 99  RRMLHVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP-EDSHFVIEL 155
             + H+V      +++   ++Y + L        D  +     + L      +    I++
Sbjct: 23  EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKM 82

Query: 156 TYNYGVD-----------KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP 198
             N                Y+ G G  H  +  +D+  T+  ++ +G +    P
Sbjct: 83  PINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 13/102 (12%)

Query: 103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFL------GYGPEDSHFVIELT 156
           H V  V +L   + +     G     +    +     + L               + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 157 YNYGVD-------KYDIGTGFGHFGIAVDDVAKTVELIKAKG 191
           +            +++ G G  H  +  +D+ +T+  ++ + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 14/110 (12%)

Query: 103 HVVYRV--GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHF------VIE 154
           H V  V  G ++  + FY + +G   +++    +     + L               + E
Sbjct: 9   HCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINE 68

Query: 155 LTYNYGVD------KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP 198
                         ++  G G  H  +   D+ +TV  ++A G +    P
Sbjct: 69  PALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.6 bits (89), Expect = 1e-04
 Identities = 18/123 (14%), Positives = 34/123 (27%), Gaps = 12/123 (9%)

Query: 109 GDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELT-YNYGVDKYDIG 167
           G+       Y + LG  L       +            +D      L   ++ +   D  
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPA-DWKDKIMHARLVVGSFALMASDNH 70

Query: 168 TGFGHFG---------IAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 218
             + + G         +     A+ +    A+GG V    GP     +      D  G  
Sbjct: 71  PAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVA 129

Query: 219 FEL 221
           + +
Sbjct: 130 WMV 132

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	268
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.86
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.83
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.82
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.81
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.79
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.79
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.78
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.77
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.76
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.76
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.75
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.74
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.74
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.74
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.74
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.73
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.72
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.72
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.72
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.7
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.69
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.69
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.65
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.57
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.53
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.52
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.45
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.37
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.33
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.29
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.27
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.2
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.16
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.99
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.93
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.37
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	97.61
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.54
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	97.49
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	97.41
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	97.28
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	97.18
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	97.15
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	97.12
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	97.04
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	97.03
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	96.83
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	96.82
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	96.58
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	96.58
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	96.54
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	96.54
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	96.46
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	96.45
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	96.24
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	96.17
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	95.86
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	95.73
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	95.69
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	95.45
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	95.26
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	95.16
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	94.99
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	94.14
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	93.99
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	93.96
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	93.57
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	93.48
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	90.93
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	90.28
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	88.38
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	86.21
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	83.7

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.3e-20  Score=144.58  Aligned_cols=133  Identities=60%  Similarity=1.053  Sum_probs=101.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      ++|+||+|.|+|++++++||+++|||++...............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            47999999999999999999999999998877655555545555444433333444444444444455668889999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCc
Q 024414          179 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL  231 (268)
Q Consensus       179 Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l  231 (268)
                      +++++.++++++|..+..++...++++.+.+|++|||||.|||+|..+....+
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            99999999999999999888888887788999999999999999988755444

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.83  E-value=1.1e-19  Score=142.53  Aligned_cols=127  Identities=18%  Similarity=0.244  Sum_probs=94.6

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC-----------CCceeEEEEeeCCCCceEEEEEee-ccCC--
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-----------EEKYTNAFLGYGPEDSHFVIELTY-NYGV--  161 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~lel~~-~~~~--  161 (268)
                      ..+++|+||+|.|+|++++++||++ |||++..+....           ......+++...+....+.+.... ....  
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            4578999999999999999999998 999988765432           233455666655543333322221 1111  


Q ss_pred             --CCCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          162 --DKYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       162 --~~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                        .......|+.|++|.|+|+++++++|+++|+++..++....+ +.+.+|++||||+.|||+|+
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence              111234588999999999999999999999999888776655 46889999999999999986

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.82  E-value=8.4e-20  Score=138.51  Aligned_cols=114  Identities=19%  Similarity=0.201  Sum_probs=89.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      ++|+||.|.|+|+++|++||+++||+++....+    +  .+.+..+.    ..+.+......+....+.|+ +++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~--~~~~~~g~----~~l~l~~~~~~~~~~~~~~~-~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS----HCLMLSQNHLVPLENFQSGI-IIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT----EEEEEESSCSSSCCCCCSCE-EEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----C--eEEEEEcC----ceeeeeecccCCCCCCCcce-EEEEEEC
Confidence            468999999999999999999999999866543    1  34555553    34555544333333334444 8999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          179 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       179 Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      |+++++++++++|+.+..+|.+.++| .+.++++|||||.|||++.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g-~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCC-eEEEEEECCCCCEEEEEEe
Confidence            99999999999999999988888876 4889999999999999986

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=8.5e-19  Score=137.31  Aligned_cols=129  Identities=14%  Similarity=0.137  Sum_probs=93.1

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC-ceeEEEEeeCCCCceEEEEEeeccCCCCCC-CCCCeeEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYD-IGTGFGHFG  174 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~-~g~g~~hi~  174 (268)
                      .+.+|+||+|.|+|++++++||+++|||++..+....+. .....++..+.......+.........+.. ...++.|++
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hia   82 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG   82 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEE
Confidence            478999999999999999999999999999877654332 222333433333334445555433322222 334689999


Q ss_pred             EEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCC
Q 024414          175 IAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  228 (268)
Q Consensus       175 f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~  228 (268)
                      |.|+|   ++++.+++++.|+.+.. +...  ++.+.+||+|||||.|||++..+.+
T Consensus        83 f~v~~~~~l~~~~~~l~~~gv~~~~-~~~~--~~~~~~yf~DPdG~~iEl~~~~~~~  136 (144)
T d1zswa1          83 LLVPSEDSLHYWKERFEKFDVKHSE-MTTY--ANRPALQFEDAEGLRLVLLVSNGEK  136 (144)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECC-SEEE--TTEEEEEEECTTCCEEEEEECTTCC
T ss_pred             EecCCchhHHHHhhhhhccceeeeC-cccc--CCeEEEEEECCCCCEEEEEEeCCCC
Confidence            99998   77889999999998743 3333  3468899999999999999987644

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.81  E-value=2.1e-19  Score=139.94  Aligned_cols=129  Identities=19%  Similarity=0.301  Sum_probs=94.5

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeC--CCCceEEEEEeeccCCCC--------CC
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYG--PEDSHFVIELTYNYGVDK--------YD  165 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g--~~~~~~~lel~~~~~~~~--------~~  165 (268)
                      +|..+|+||+|.|+|+++|++||+++||++..........+....+....  .......+++.+......        ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            68999999999999999999999999999988776655544444333221  123345666665432221        12


Q ss_pred             CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCC-cccCCCCeEEEEE--ECCCCCEEEEEEeC
Q 024414          166 IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREP-GPVKGGNTVIAFI--EDPDGYKFELLERG  225 (268)
Q Consensus       166 ~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p-~~~~~G~~~~~~~--~DPdG~~iEl~e~~  225 (268)
                      ...|+.|+||.|+|+++++++|+++|+++..++ ...++| .+.+|+  +||+|+.|||+|.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g-~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCC-CEEEEEeccCCCCeEEEEEECC
Confidence            456899999999999999999999999986543 333343 455656  69999999999964

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.79  E-value=2.2e-18  Score=138.34  Aligned_cols=145  Identities=14%  Similarity=0.172  Sum_probs=104.3

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      ..+|+||+|.|+|++++++||+++|||++..+...........+...+...... .....       ...+++.|++|.+
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~h~~~~~   74 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDV-AFIHH-------PEKGRLHHVSFHL   74 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSE-EEEEC-------SSSSEEEEEEEEC
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccc-ccccc-------CCCCccceeEEEE
Confidence            468999999999999999999999999998877666555555555554433222 22111       1235788999999


Q ss_pred             CCHH---HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCceeEEE--EcCCHHHHHHHHHHh
Q 024414          178 DDVA---KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVML--RVGDLDRSINFYEQA  251 (268)
Q Consensus       178 ~Did---~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~v~L--~v~d~~~s~~FY~~v  251 (268)
                      .+++   +++++|++.|+.+..++.....|..+.+|++|||||.|||+...+.. ..+|...  ......+++.||.+.
T Consensus        75 ~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~-~p~~~p~~w~~~~~~~~~~~~~r~  152 (162)
T d1mpya2          75 ETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYN-YPDHKPVTWTTDQLGKAIFYHDRI  152 (162)
T ss_dssp             SCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBC-CTTSCCEEEEGGGHHHHHCTTTCS
T ss_pred             eeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCccc-CCCCCCccCCHHHCCceeEecCCC
Confidence            8755   78899999999998887777667778999999999999999876532 2223222  335555665555443

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.6e-18  Score=140.25  Aligned_cols=129  Identities=32%  Similarity=0.528  Sum_probs=95.3

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCC-----------------CceEEEEEeec
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPE-----------------DSHFVIELTYN  158 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~-----------------~~~~~lel~~~  158 (268)
                      +...+|+|++|.|+|+++|++||+++|||++.........+...++...+..                 .....+.....
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            3366899999999999999999999999999887776666666666654321                 11111222211


Q ss_pred             c---CCC----CCCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          159 Y---GVD----KYDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       159 ~---~~~----~~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      .   ...    ......|+.|+++.++|+++++++|+++|+++..++.+....  ..+|++|||||.|||+|+..
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~--~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK--GLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSST--TCEEEECTTCCEEEEECTTT
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCce--EEEEEECCCCCEEEEEeCCC
Confidence            1   011    111345899999999999999999999999999888765433  45789999999999999864

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.78  E-value=1.9e-18  Score=140.01  Aligned_cols=122  Identities=21%  Similarity=0.201  Sum_probs=87.6

Q ss_pred             hcCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414           96 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus        96 ~~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      ..+++|+||+|.|+|++++.+||+++|||++..+.+.     ...+........ ..+.+.............++.||+|
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~HiAf   81 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ-----EAIFQSIKGEAF-GEIVVKYLDGPTEKPGRGSIHHLAI   81 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS-----EEEEESSTTCST-TCEEEEECCSSBCBCCBTCEEEEEE
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc-----eEEEEeccCccc-eEEEeccccccccccCccccceEEE
Confidence            4578999999999999999999999999999876432     233333322222 2233333222222333447899999


Q ss_pred             EECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          176 AVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       176 ~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      .|+|   ++++++++.+.|+++. ++.+  .+..+.+||+|||||.|||+...|
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~-~~~~--~~~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSS-GIID--RFYFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCC-CCEE--CSSEEEEEEECTTCCEEEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCcc-cccc--CCCEEEEEEECCCCcEEEEEECCC
Confidence            9986   7789999999999874 3233  345788999999999999998754

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.77  E-value=3.6e-18  Score=131.23  Aligned_cols=119  Identities=17%  Similarity=0.228  Sum_probs=86.4

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC-ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE-KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGI  175 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f  175 (268)
                      |+.+|+||+|.|+|++++++||+++|||++..+.+.... .....++..+.    ..+.+.....    ....+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEK----LAERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCC----CSSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeeccccc----ccccceeeeee
Confidence            678999999999999999999999999999887654332 23345555442    3444444222    12345668888


Q ss_pred             EEC--CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          176 AVD--DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       176 ~V~--Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      .++  |+++++++++++|+++..++.... +..+.+||+|||||.|||.+.
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence            775  799999999999999876644433 345789999999999999864

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=3.8e-18  Score=134.42  Aligned_cols=117  Identities=21%  Similarity=0.263  Sum_probs=89.7

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||.|.|+|++++++||+++|||++......      ..++........+.+.+...       ...++.|++|.+
T Consensus        14 i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~~~   80 (146)
T d1f1ua1          14 IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN------TIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYRV   80 (146)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEE
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC------ceeeecccccccceeecccc-------CCCCCceeeEee
Confidence            77999999999999999999999999999876432      23443333222222333221       125788999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      .   |+++++++|+++|+.+...+.....|..+.+||+|||||.|||+...+.
T Consensus        81 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~  133 (146)
T d1f1ua1          81 KSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEH  133 (146)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             ccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccc
Confidence            7   5889999999999999877777766666789999999999999986543

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.76  E-value=3.9e-18  Score=132.15  Aligned_cols=113  Identities=19%  Similarity=0.233  Sum_probs=88.1

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||+|.|+|++++++||+++|||++..+.+      ..++++.+...+.+.+  ...       ...++.|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l--~~~-------~~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAV--QQG-------EVDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEE--EEC-------TTCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEE--ecC-------CCCCceEEEEEE
Confidence            5689999999999999999999999999987654      2567777655444433  332       124788999999


Q ss_pred             CC---HHHHHHHHHHcCCeEeeCCcccC--CCCeEEEEEECCCCCEEEEEEeC
Q 024414          178 DD---VAKTVELIKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~D---id~~~~~L~~~G~~i~~~p~~~~--~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      .+   ++++.++|+++|+++...+....  .+..+.+||+|||||.||++...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            64   77899999999999987765432  24567899999999999998653

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.7e-18  Score=134.80  Aligned_cols=129  Identities=19%  Similarity=0.291  Sum_probs=95.2

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCc--eeEEEEeeCCCCceEEEEEeeccCCCCC-------CCCC
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK--YTNAFLGYGPEDSHFVIELTYNYGVDKY-------DIGT  168 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~lel~~~~~~~~~-------~~g~  168 (268)
                      ..+|+||+|.|+|+++|++||+++|||++......+...  .....+..+  .  ..+++.........       .++.
T Consensus         9 ~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~g~   84 (149)
T d1sqia1           9 FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG--K--IVFVLCSALNPWNKEMGDHLVKHGD   84 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET--T--EEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             eeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC--c--EEEEEEeccCCCCchhhhhhhhCCC
Confidence            568999999999999999999999999998776544332  223334333  2  33444432221111       2567


Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEEeCCCCCC
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPTPEP  230 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e~~~~~~~  230 (268)
                      |+.||||.|+|+++++++|+++|+++..+|....+  |..+.++++.|.|..++|+|+....++
T Consensus        85 G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          85 GVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             eEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            99999999999999999999999999888876544  334567888898999999998765443

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=2.7e-17  Score=125.82  Aligned_cols=122  Identities=55%  Similarity=0.919  Sum_probs=89.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      .+|.||+|.|+|++++++||+++|||++..........................................+..++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            58999999999999999999999999998876554444434444333332222233223333333445567778999999


Q ss_pred             CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          179 DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       179 Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +++++++++...++++..++     ++.+.+||+|||||.|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYED-----ESGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEEC-----SSSSEEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCC-----CCcEEEEEECCCCCEEEEEECC
Confidence            99999999999999876543     2357799999999999999865

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.74  E-value=2.4e-17  Score=128.41  Aligned_cols=116  Identities=20%  Similarity=0.340  Sum_probs=85.5

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      |+.+|+||+|.|+|++++++||+++|||++......      ..++..++.  ...+.+..... .......+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~~--~~~l~~~~~~~-~~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDL--WVCLSYDEARQ-YVPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETTE--EEEEEECTTCC-CCCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------ccccccccc--cceeecccccc-cCCCcCCccceeeee
Confidence            789999999999999999999999999999876542      345555432  23343333222 122233466788888


Q ss_pred             E--CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          177 V--DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       177 V--~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +  +|+++++++|+++|+++...+.    +.++.+||+|||||.|||.+..
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC----SSSEEEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC----CCceEEEEECCCCCEEEEEECC
Confidence            7  5799999999999999875532    3357899999999999998643

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.74  E-value=7.5e-18  Score=135.13  Aligned_cols=127  Identities=22%  Similarity=0.299  Sum_probs=96.5

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCC--ceeEEEEeeCCCCceEEEEEeeccCCCC----------C
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEE--KYTNAFLGYGPEDSHFVIELTYNYGVDK----------Y  164 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~lel~~~~~~~~----------~  164 (268)
                      ++.+|+||+|.|+|+++|++||+++|||++......+..  ....+.++.+    ...+++........          .
T Consensus         4 ~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~   79 (163)
T d1t47a1           4 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVA   79 (163)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhh
Confidence            367999999999999999999999999999876654332  2334444443    23455554322211          1


Q ss_pred             CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEEeCCC
Q 024414          165 DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       165 ~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                      ..+.|+.||||.|+|+++++++|+++|+++..+|....+  |..+.+++++|+|..++|+|+...
T Consensus        80 ~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~  144 (163)
T d1t47a1          80 EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGY  144 (163)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred             cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCC
Confidence            246799999999999999999999999999888776543  445788999999999999998753

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=1.8e-17  Score=128.20  Aligned_cols=112  Identities=22%  Similarity=0.363  Sum_probs=80.6

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      |+.+|+||+|.|+|++++++||+++||+++..+.+.      ..++..+.    ..+........  .....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~--~~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCC----eEEEEeeeccc--cccccccccchhc
Confidence            678999999999999999999999999999876542      34454442    23333332222  1222334455555


Q ss_pred             E--CCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          177 V--DDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       177 V--~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +  +|+++++++|+++|+++...+    .+..+.+||+|||||.|||+..
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~----~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQN----RSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECC----CSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCC----CcceeEEEEECCCCCEEEEEEC
Confidence            5  689999999999999886542    2334679999999999999753

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.74  E-value=1.1e-17  Score=125.03  Aligned_cols=108  Identities=19%  Similarity=0.290  Sum_probs=79.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414           99 RRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus        99 ~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      ++|+||.|.|+|++++++||+++|||++..+.+.     ..+++. ++..  ..+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~-~~~~--~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMR-DNDG--FILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEE-CTTC--CEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeee-ecce--eeeeeeeeecc----cccccceeeeeec
Confidence            5899999999999999999999999999876542     133443 3332  34444442221    2346679999998


Q ss_pred             C---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          179 D---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       179 D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      |   +++++++++++|+++..++.    +..+.+|++|||||.|||.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH----AHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE----C-CEEEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC----CceEEEEEECCCCCEEEEE
Confidence            7   67899999999998754432    3347899999999999986

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.74  E-value=1.2e-17  Score=129.55  Aligned_cols=113  Identities=15%  Similarity=0.178  Sum_probs=88.1

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||+|.|+|++++++||+++|||++..+..      ..++++.++..+.+.+  ...       ...++.|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~--~~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAV--QPG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEE--EEC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeee--ecc-------CCCCceEEEEEe
Confidence            5799999999999999999999999999987654      2567777655444433  221       134788999999


Q ss_pred             C---CHHHHHHHHHHcCCeEeeCCcccCC--CCeEEEEEECCCCCEEEEEEeC
Q 024414          178 D---DVAKTVELIKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       178 ~---Did~~~~~L~~~G~~i~~~p~~~~~--G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +   |++++.++++++|+++...+.....  +....+||+|||||.|||+...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            6   4788999999999999876654322  2346789999999999998654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=2e-17  Score=133.05  Aligned_cols=129  Identities=18%  Similarity=0.273  Sum_probs=95.5

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC-------------CCC
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV-------------DKY  164 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~-------------~~~  164 (268)
                      +.+|+||+|.|+|++++++||+++|||++..+...+.+.........+.....+.+........             ...
T Consensus        10 i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~   89 (167)
T d1sqda1          10 VKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSF   89 (167)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTC
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccccC
Confidence            6799999999999999999999999999988765544332233333333333333322211000             000


Q ss_pred             ----------CCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          165 ----------DIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       165 ----------~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                                .++.|+.||||.|+|+++++++|+++|+++..+|....+ +.+.++++.+.+..++|+|+...
T Consensus        90 ~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1          90 DHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             CHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             CcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCC
Confidence                      135699999999999999999999999999999988765 47888999999999999999764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.72  E-value=2.4e-17  Score=126.38  Aligned_cols=118  Identities=18%  Similarity=0.196  Sum_probs=84.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeec------cCCCCCCCCCCeeEE
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYN------YGVDKYDIGTGFGHF  173 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~------~~~~~~~~g~g~~hi  173 (268)
                      +|+||+|.|+|++++++||++ ||+.+......+.    .+++..+. .  ..+.+...      ........+.+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDG-G--IRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGG-G--CEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccc-e--eeeeecccccccccCCCCCCCccccceeE
Confidence            799999999999999999977 8998765433221    23333222 1  22333221      111112223345699


Q ss_pred             EEEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          174 GIAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       174 ~f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      +|.|+|   +++++++++++|+++..+|...++| .+.+|++|||||.|||+++.|
T Consensus        74 ~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G-~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          74 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEECC
T ss_pred             eeeeccchhhHHHHHHHHhccCccccCCeEcCCC-cEEEEEECCCCCEEEEEecCC
Confidence            999987   6778999999999999998888775 588999999999999998754

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.72  E-value=2.4e-17  Score=128.18  Aligned_cols=118  Identities=21%  Similarity=0.303  Sum_probs=86.1

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC---H
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD---V  180 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D---i  180 (268)
                      |++.|+|++++++||+++|||++..+.... .++..+++..+.  ..+.+.+...........+.+..|++|.|+|   +
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCC--CceeeecccccccccccccccCceEEEEeCCHHHH
Confidence            444558999999999999999998765533 234556665543  3455666665554444455667899999886   7


Q ss_pred             HHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC
Q 024414          181 AKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  226 (268)
Q Consensus       181 d~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~  226 (268)
                      ++++++|+++|+++..++... + +.+.+||+||||+.|||++...
T Consensus        90 ~~~~~~l~~~G~~~~~~~~~~-~-~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          90 AAITSKLKHMGYQEVESENPY-W-SNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             HHHHHHHHHTTCCEECCSSHH-H-HSSEEEEECTTCCEEEEESSCC
T ss_pred             HHHHHHHHHCCCeEeCCCCCC-C-CceEEEEECCCCCEEEEEcCCC
Confidence            888999999999988655433 2 3356899999999999996543

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.72  E-value=6.5e-17  Score=126.49  Aligned_cols=117  Identities=23%  Similarity=0.277  Sum_probs=84.0

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      .+.+|+||.|.|+|++++++||+++|||++..+....     ..+...........+.+....       ..+..|+++.
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~   71 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG-----RVYLKAWTEVDKFSLVLREAD-------EPGMDFMGFK   71 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS-----CEEEECTTCCBSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC-----ccceecccccceeeccccccC-------cccceeeeee
Confidence            3679999999999999999999999999988764322     122222222222223333211       2355676666


Q ss_pred             EC---CHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          177 VD---DVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       177 V~---Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      +.   |+++++++|+++|+++...+.....|..+.+||+|||||.|||++..
T Consensus        72 ~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             ehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence            64   68999999999999987766655555568899999999999999754

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.70  E-value=5.1e-17  Score=131.59  Aligned_cols=130  Identities=18%  Similarity=0.174  Sum_probs=95.3

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCC------C-------
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVD------K-------  163 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~------~-------  163 (268)
                      .+.+++||+|.|+|++++++||+++|||++........+.........+.....+.+.........      .       
T Consensus        10 ~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (172)
T d1sp8a1          10 HTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAA   89 (172)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             CcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchh
Confidence            367999999999999999999999999999877654433222222222222222333222211110      0       


Q ss_pred             ----CCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC
Q 024414          164 ----YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  227 (268)
Q Consensus       164 ----~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~  227 (268)
                          ..++.|+.||||.|+|+++++++|+++|+++..+|.+..+| .+.++++.|.+..++|+|+.+.
T Consensus        90 ~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g-~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          90 RRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTT
T ss_pred             hhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCC-EEEEEEECCCCcEEEEEecCCC
Confidence                01467999999999999999999999999999999888765 6889999998889999999864

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.69  E-value=5.2e-16  Score=126.16  Aligned_cols=126  Identities=19%  Similarity=0.184  Sum_probs=91.9

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAV  177 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V  177 (268)
                      +.+|+||+|.|+|++++++|| ++|||++........+....+++..+...+.+  .+...       ..+++.|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l--~~~~~-------~~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDT--ALTGG-------NGPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSE--EEEES-------SBSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccce--ecccc-------cCCCccceeEEe
Confidence            578999999999999999999 68999998776655555556677655444333  33321       125788999999


Q ss_pred             CCH---HHHHHHHHHcCCeE--eeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCcee
Q 024414          178 DDV---AKTVELIKAKGGKV--TREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQ  233 (268)
Q Consensus       178 ~Di---d~~~~~L~~~G~~i--~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~  233 (268)
                      .++   .++.++|+++|+..  ...|.....|....+|++|||||.|||+.........+|
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~~~d~~~  133 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYYTGDPDN  133 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCCCCSTTC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCccccCCCC
Confidence            864   46667999999854  344555555667889999999999999986654333333

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.69  E-value=2.9e-17  Score=122.11  Aligned_cols=109  Identities=20%  Similarity=0.173  Sum_probs=79.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECC
Q 024414          100 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDD  179 (268)
Q Consensus       100 ~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~D  179 (268)
                      ++ +..|.|+|++++++||+++|||++....+.      ...+..+..  ...+......    ...+.+..|++|.++|
T Consensus         3 ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~d   69 (111)
T d2pjsa1           3 RV-VANIATPEPARAQAFYGDILGMPVAMDHGW------IVTHASPLE--AHAQVSFARE----GGSGTDVPDLSIEVDN   69 (111)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS------EEEEEEEEE--EEEEEEEESS----SBTTBCCCSEEEEESC
T ss_pred             EE-EEEEEeCCHHHHHHHHHHhhCCceeecccc------eeEeccccc--cceeeecccc----cCCCCceeEEEEEecC
Confidence            45 578999999999999999999998765431      122222211  1112111111    1123345589999999


Q ss_pred             HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          180 VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       180 id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      +++++++++++|+++..+|...++| .+.++++|||||.|||+
T Consensus        70 vd~~~~~l~~~g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          70 FDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHhhccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            9999999999999998888888876 57899999999999986

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.65  E-value=2.3e-15  Score=119.89  Aligned_cols=119  Identities=24%  Similarity=0.301  Sum_probs=85.2

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecC---CCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDI---PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFG  174 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~  174 (268)
                      ..+|+||+|.|+|++++.+||+++|||++......   ........++..+...+.+  .....      ....++.|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--a~~~~------~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTI--ALAAF------PIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSE--EEECC------SCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeecccccee--eeccC------CCCCceeEEE
Confidence            46899999999999999999999999998765432   1222334555555443333  22221      1235899999


Q ss_pred             EEECC---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCC-EEEEEEeC
Q 024414          175 IAVDD---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLERG  225 (268)
Q Consensus       175 f~V~D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~-~iEl~e~~  225 (268)
                      |.|++   +.+++++|+++|+.+. .+.....+....+|++||||+ .+|+....
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EECCCHHHHHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            99986   5567899999998653 455555456789999999998 69998754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.57  E-value=4e-14  Score=106.81  Aligned_cols=105  Identities=25%  Similarity=0.336  Sum_probs=75.1

Q ss_pred             EEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHHH
Q 024414          106 YRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTVE  185 (268)
Q Consensus       106 l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~~  185 (268)
                      |.|+|+++|++||++ |||++......      .+.+..+.    ..+.+.......+   .....++++.|+|++++++
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~   73 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFRDAG------WMILQRGD----LMLEFFAHPGLDP---LASWFSCCLRLDDLAEFYR   73 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEECSS------EEEEEETT----EEEEEEECTTCCG---GGCCCEEEEEESCHHHHHH
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEecCc------eeeeecce----ecccccccccccc---CCCCcEEEEEECCHHHHHH
Confidence            999999999999987 99998865431      23343332    2333333222111   1234479999999999999


Q ss_pred             HHHHcCCeEee-------CCcccCCCCeEEEEEECCCCCEEEEEEeC
Q 024414          186 LIKAKGGKVTR-------EPGPVKGGNTVIAFIEDPDGYKFELLERG  225 (268)
Q Consensus       186 ~L~~~G~~i~~-------~p~~~~~G~~~~~~~~DPdG~~iEl~e~~  225 (268)
                      .++++|+.+..       ++...++| .+.+||+|||||.|||+|..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~G-~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          74 QCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECC
T ss_pred             HHhhhhhhhccccccccccceecCCC-cEEEEEECCCCCEEEEEEcc
Confidence            99999887643       45556665 47899999999999999864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.53  E-value=1.6e-14  Score=111.54  Aligned_cols=116  Identities=12%  Similarity=0.094  Sum_probs=79.0

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-------CceeEEEEeeCCCCceEEEEEeec--c-CCCCCCCCCCeeE
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-------EKYTNAFLGYGPEDSHFVIELTYN--Y-GVDKYDIGTGFGH  172 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-------~~~~~~~l~~g~~~~~~~lel~~~--~-~~~~~~~g~g~~h  172 (268)
                      ++.|.|.|+++|++||+++||+++..+...++       +....+.+..++.    .+.+...  . ............+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS----SFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE----EEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCe----eeeccccccccccccCCCCCcceE
Confidence            35677789999999999999999876543221       1222344555431    2222221  1 1111112223348


Q ss_pred             EEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          173 FGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       173 i~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      +++.|+|++++++++.++|+++..++.+.++| .+.++++||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            99999999999999999999999999998887 478999999999999975

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.52  E-value=9.9e-14  Score=104.45  Aligned_cols=105  Identities=14%  Similarity=0.051  Sum_probs=74.2

Q ss_pred             EEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHHHH
Q 024414          105 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKTV  184 (268)
Q Consensus       105 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~~~  184 (268)
                      +|.|+|++++++||+++|||++....+      ..+++..+.    ..+.+......    ......++.+.++|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGD----IRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETT----EEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeee----eeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            489999999999999999999876533      134555443    23444442221    1123448999999999999


Q ss_pred             HHHHHcCCeEeeCCc-------ccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          185 ELIKAKGGKVTREPG-------PVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       185 ~~L~~~G~~i~~~p~-------~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +++++++......+.       ...+ +.+.+|++|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESP-AGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEET-TEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCC-CeEEEEEECCCCCEEEEEeC
Confidence            999999876533222       1223 35889999999999999853

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.45  E-value=1.3e-12  Score=97.43  Aligned_cols=105  Identities=12%  Similarity=0.011  Sum_probs=72.8

Q ss_pred             EEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEECCHHH
Q 024414          103 HVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAK  182 (268)
Q Consensus       103 HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~Did~  182 (268)
                      +.+|.|+|++++++||+++|||++..+.+.      ..++..+.    ..+.+......    ...+..++.+.+++++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~------~~~~~~~~----~~l~~~~~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD------FAGVVRDD----VTLFISAVQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS------EEEEEETT----EEEEEEECSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC------eeEEeccc----ceeeccccccc----cCCCCceEEEeeccHHH
Confidence            345999999999999999999999876442      34444443    23433332221    12344578899999999


Q ss_pred             HHHHHHHcCCeE--------eeCCcccCCCCeEEEEEECCCCCEEEEEE
Q 024414          183 TVELIKAKGGKV--------TREPGPVKGGNTVIAFIEDPDGYKFELLE  223 (268)
Q Consensus       183 ~~~~L~~~G~~i--------~~~p~~~~~G~~~~~~~~DPdG~~iEl~e  223 (268)
                      +++.+.+++...        ..++.+.++  ++.+|++|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence            988877665433        334444443  478999999999999986

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.37  E-value=1.5e-12  Score=102.87  Aligned_cols=122  Identities=10%  Similarity=0.048  Sum_probs=89.5

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCCCceeEEEEeeCCCCceEEEEEeeccCC--CC--CCCCCCeeEE
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGV--DK--YDIGTGFGHF  173 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~--~~~g~g~~hi  173 (268)
                      +.+|+||.+.|+|++++.+||++ |||+...+.....    ...++.+.    +.+.+......  ..  ..++.|+.||
T Consensus         7 ~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~G~----i~ll~~~~~~s~~~~~~~~hg~gv~hi   77 (150)
T d1cjxa1           7 LMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQGE----INLILNNEPNSIASYFAAEHGPSVCGM   77 (150)
T ss_dssp             EEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEETT----EEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             cCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEecCc----EEEEecCCCCCHhHhHHhhCCCceEEE
Confidence            56999999999999999999987 9999987654322    23333332    33333322111  11  1278899999


Q ss_pred             EEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCC
Q 024414          174 GIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  230 (268)
Q Consensus       174 ~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~  230 (268)
                      ||.|+|++++++++.++|++...++..  .|......+++|+|.++.|+++......
T Consensus        78 af~V~D~~~a~~~a~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~~~~~  132 (150)
T d1cjxa1          78 AFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSS  132 (150)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCC
T ss_pred             EEEeCCHHHHHHHHHHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCCCCCc
Confidence            999999999999999999997765432  3445678899999999999998765443

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.33  E-value=3.2e-12  Score=105.78  Aligned_cols=100  Identities=21%  Similarity=0.208  Sum_probs=71.8

Q ss_pred             CceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecCCCCc--eeEEEEeeCCCCceEEEEEeeccCCCC--------CC
Q 024414           98 KRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEEK--YTNAFLGYGPEDSHFVIELTYNYGVDK--------YD  165 (268)
Q Consensus        98 ~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~lel~~~~~~~~--------~~  165 (268)
                      ..+|+||++.|+  |+++++.||+++|||+.....+..+..  .....+.....  .+.+.+..+.....        ..
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~--~~~~~l~~~~~~~~sqi~~fl~~~   80 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDG--MIRIPLNEESSKGAGQIEEFLMQF   80 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTS--SCEEEEEEECTTCCSHHHHHHHHH
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeecccc--ccceecccCCCCCccHHHHHHHhc
Confidence            468999999998  999999999999999998776654332  22333333322  23344433222111        12


Q ss_pred             CCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCc
Q 024414          166 IGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPG  199 (268)
Q Consensus       166 ~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~  199 (268)
                      .+.|++||||.|+|+.+++++|+++|+++...|.
T Consensus        81 ~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~pp  114 (203)
T d1cjxa2          81 NGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPP  114 (203)
T ss_dssp             TSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             CCCCCceEEEEeCCHHHHHHHHHhcCCccccCch
Confidence            5679999999999999999999999999976553

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.29  E-value=2.4e-11  Score=100.04  Aligned_cols=102  Identities=16%  Similarity=0.248  Sum_probs=72.9

Q ss_pred             cCceeeEEEEEeC--CHHHHHHHHHhhcCCEEEEEecC-----CCCceeEEEEeeCCCCceEEEEEeeccCC--CC----
Q 024414           97 DKRRMLHVVYRVG--DLDRTIKFYTECLGMKLLRKRDI-----PEEKYTNAFLGYGPEDSHFVIELTYNYGV--DK----  163 (268)
Q Consensus        97 ~~~~l~HV~l~V~--Dle~a~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~----  163 (268)
                      +..+|+||++.|+  ++++++.||+++|||+.......     +.......-+..+..  .+.+.+..+...  ..    
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~--~v~l~lne~~~~~~~s~i~~   80 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTL--KVKFPINEPALAKKKSQIDE   80 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTS--CSEEEEEEECCSSSCCHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccccc--ccceeecccCccccccchhh
Confidence            4678999999999  99999999999999998765422     223333333433333  344444432211  11    


Q ss_pred             ---CCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcc
Q 024414          164 ---YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPGP  200 (268)
Q Consensus       164 ---~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~  200 (268)
                         ...+.|++||||.|+||.+++++|+++|+.+...|..
T Consensus        81 FL~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~  120 (199)
T d1t47a2          81 YLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS  120 (199)
T ss_dssp             HHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGG
T ss_pred             hhhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChH
Confidence               1256799999999999999999999999999877743

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=2.5e-11  Score=100.69  Aligned_cols=101  Identities=15%  Similarity=0.252  Sum_probs=71.3

Q ss_pred             cCceeeEEEEEeCC--HHHHHHHHHhhcCCEEEEEecCC-----CCceeEEEEeeCCCCceEEEEEeeccCC--CC----
Q 024414           97 DKRRMLHVVYRVGD--LDRTIKFYTECLGMKLLRKRDIP-----EEKYTNAFLGYGPEDSHFVIELTYNYGV--DK----  163 (268)
Q Consensus        97 ~~~~l~HV~l~V~D--le~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~g~~~~~~~lel~~~~~~--~~----  163 (268)
                      ...+|+||++.|++  ++++++||+++|||+.....+..     ....+...+..+++.  +.+.+..+...  ..    
T Consensus        21 gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~--i~~~lne~~~~~~~sqi~~   98 (210)
T d1sqia2          21 NLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEES--IKMPINEPAPGRKKSQIQE   98 (210)
T ss_dssp             CEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSC--CEEEEEECC-----CHHHH
T ss_pred             CcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCcc--ccccccccCCCCcccHHHH
Confidence            46689999999998  99999999999999976554321     123344444444433  44444443221  11    


Q ss_pred             ---CCCCCCeeEEEEEECCHHHHHHHHHHcCCeEeeCCc
Q 024414          164 ---YDIGTGFGHFGIAVDDVAKTVELIKAKGGKVTREPG  199 (268)
Q Consensus       164 ---~~~g~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~  199 (268)
                         ...|.|++||||.|+||.+++++|+++|+.+...|.
T Consensus        99 fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          99 YVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence               125789999999999999999999999999987775

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.20  E-value=6.1e-11  Score=99.33  Aligned_cols=94  Identities=20%  Similarity=0.305  Sum_probs=66.4

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCC-----CCceeEEEEeeCCCCceEEEEEeeccC---CCCC----
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIP-----EEKYTNAFLGYGPEDSHFVIELTYNYG---VDKY----  164 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~g~~~~~~~lel~~~~~---~~~~----  164 (268)
                      .+.+|+||++.|+|++++++||+++|||+...+....     ........+..+++  .+.+++.+...   ....    
T Consensus         6 Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g--~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           6 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHH
T ss_pred             CcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCC--ccceeeeeecCCCCCccHHHHH
Confidence            4679999999999999999999999999987765432     22334444444433  34455544221   1111    


Q ss_pred             ---CCCCCeeEEEEEECCHHHHHHHHHHcCC
Q 024414          165 ---DIGTGFGHFGIAVDDVAKTVELIKAKGG  192 (268)
Q Consensus       165 ---~~g~g~~hi~f~V~Did~~~~~L~~~G~  192 (268)
                         ..+.|++||||.|+||+++++.|+++|+
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv  114 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSA  114 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhccc
Confidence               1467999999999999999999998764

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.16  E-value=1e-09  Score=84.31  Aligned_cols=113  Identities=19%  Similarity=0.157  Sum_probs=74.7

Q ss_pred             EEeC-CHHHHHHHHHhhcCCEEEEEecCCCC------------ceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeE
Q 024414          106 YRVG-DLDRTIKFYTECLGMKLLRKRDIPEE------------KYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGH  172 (268)
Q Consensus       106 l~V~-Dle~a~~FY~~vLG~~~~~~~~~~~~------------~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~h  172 (268)
                      |... |.++|++||+++||+++......++.            ....+.+..++    ..+.............+ +-.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g----~~~~~~d~~~~~~~~~~-~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS----FALMASDNHPAYPYEGI-KGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT----EEEEEEECCTTSCCCCC-CSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcC----eEEEecccCCcccccCC-CcEE
Confidence            3444 99999999999999999866543221            11123333332    12222222222222223 3347


Q ss_pred             EEEEECCHH--HHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          173 FGIAVDDVA--KTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       173 i~f~V~Did--~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +++.+++.|  +.+.++.++|++++.++.+.++| .+.++|+||+|+.|+|...
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccccCCC-cEEEEEECCCCCEEEEEec
Confidence            888888654  55777788999999999999987 5889999999999999754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.99  E-value=6.2e-10  Score=93.37  Aligned_cols=93  Identities=15%  Similarity=0.282  Sum_probs=65.1

Q ss_pred             CceeeEEEEEeCCHHHHHHHHHhhcCCEEEEEecCCC-----CceeEEEEeeCCCCceEEEEEeeccCC---CC------
Q 024414           98 KRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPE-----EKYTNAFLGYGPEDSHFVIELTYNYGV---DK------  163 (268)
Q Consensus        98 ~~~l~HV~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~lel~~~~~~---~~------  163 (268)
                      ..+|+||++.|+|++++.+||.++||++........+     ..+...-+..++  ..+.+.+.+....   ..      
T Consensus        20 l~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~--g~v~~~l~E~~~~~~~~sqi~~FL   97 (230)
T d1sqda2          20 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--EMVLLPINEPVHGTKRKSQIQTYL   97 (230)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--SCSEEEEEEECCC---CCHHHHHH
T ss_pred             cCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCC--cccceeEEeecCCCCCcchHHHHH
Confidence            5689999999999999999999999998887654322     122222233332  3345555543211   11      


Q ss_pred             -CCCCCCeeEEEEEECCHHHHHHHHHHcCC
Q 024414          164 -YDIGTGFGHFGIAVDDVAKTVELIKAKGG  192 (268)
Q Consensus       164 -~~~g~g~~hi~f~V~Did~~~~~L~~~G~  192 (268)
                       ...+.|++||||.|+||.+++++|+++|+
T Consensus        98 ~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          98 EHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             hhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence             12578999999999999999999999754

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.93  E-value=4.6e-08  Score=74.85  Aligned_cols=113  Identities=16%  Similarity=0.231  Sum_probs=73.2

Q ss_pred             EEEEeCCHHHHHHHHHhhcCCEEEEEec-------CCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414          104 VVYRVGDLDRTIKFYTECLGMKLLRKRD-------IPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus       104 V~l~V~Dle~a~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      +.+.-.|.++|++||+++||.+.+.+..       ...+..-.+.+..++  .  .+.+...........+.++ .+++.
T Consensus        10 L~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~--~--~i~~~d~~~~~~~~~~~~~-s~~l~   84 (134)
T d1u7ia_          10 LMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD--Q--SVHCIDSHVRHAFDFTPAF-SFFVD   84 (134)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT--E--EEEEEEESSCCSCCCCTTE-EEEEE
T ss_pred             EEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECC--E--EEEEecCCCCCCCCCCCce-EEEEE
Confidence            3444568999999999999987654421       122334455666653  2  2333332222223333343 67888


Q ss_pred             ECCHHHH--HHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEE
Q 024414          177 VDDVAKT--VELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  222 (268)
Q Consensus       177 V~Did~~--~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~  222 (268)
                      +++.|+.  +.+..++|++++.++.+.++|. +...++||.|+.|.|.
T Consensus        85 ~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~-~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          85 CESNAQIERLAEALSDGGKALMPLGDYGFSQ-RFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CCCHHHHHHHHHHHHTTSEEEEEEECCSSSS-EEEEEECTTSCEEEEE
T ss_pred             eccHHHHHHHHHHHhcCCEEecCcccccccc-eEEEEECCCCCEEEEE
Confidence            8764433  4555577899999999888874 7889999999999885

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.37  E-value=1e-05  Score=60.89  Aligned_cols=109  Identities=11%  Similarity=0.075  Sum_probs=67.6

Q ss_pred             EEEeC-CHHHHHHHHHhhcCCEEE-EEec------CCCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEE
Q 024414          105 VYRVG-DLDRTIKFYTECLGMKLL-RKRD------IPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIA  176 (268)
Q Consensus       105 ~l~V~-Dle~a~~FY~~vLG~~~~-~~~~------~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~  176 (268)
                      -|... |.++|++||+++||-+.+ ....      .+++..-.+-+..++    ..+.+......  ..  .+ ..+.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g----~~~~~~d~~~~--~~--~~-~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAIDANSG--TE--LP-ISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC-----------C-CCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECC----EEEEeecCCCC--CC--CC-EEEEec
Confidence            35565 999999999999976433 3221      122334445565553    22333322111  11  12 247778


Q ss_pred             ECCHHH---HHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEe
Q 024414          177 VDDVAK---TVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  224 (268)
Q Consensus       177 V~Did~---~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~  224 (268)
                      +++.++   ++++| +.|+++..++.+.++| .+...++||.|+.|.|..+
T Consensus        80 ~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTIEMERLFNGL-KDEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHHHHHHHHHHH-HTTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHh-ccCCEEeccccccccc-ceEEEEECCCCCEEEEeCC
Confidence            887654   45555 4677998888888886 5889999999999999754

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2.1e-05  Score=61.49  Aligned_cols=37  Identities=43%  Similarity=0.639  Sum_probs=32.6

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecCCCC
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDNPEY  265 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p~~  265 (268)
                      -.+.|+.|+|.|++++++||+++|||++....++++.
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~   58 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIM   58 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTT
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCC
Confidence            4589999999999999999999999998877776654

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.54  E-value=0.0035  Score=48.15  Aligned_cols=127  Identities=16%  Similarity=0.140  Sum_probs=75.6

Q ss_pred             EeCCHHHHHHHHHhhcCCE-EEEEecC-------CCCceeEEEEeeCCCCceEEEEEeeccCCCCCCCCCCeeEEEEEEC
Q 024414          107 RVGDLDRTIKFYTECLGMK-LLRKRDI-------PEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVD  178 (268)
Q Consensus       107 ~V~Dle~a~~FY~~vLG~~-~~~~~~~-------~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~g~g~~hi~f~V~  178 (268)
                      .-.|.++|++||+++||-. +......       ..+..-.+.+..++  .  .+.....  .+.+..++++ ++.+.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g--~--~lm~sD~--~~~~~~~~~~-sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--I--PCLGLNG--GPAFRHSEAF-SFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--E--EEEEEEC--CTTCCCCTTE-EEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC--e--EEEeecC--CCCCCCCCCe-EEEEecC
Confidence            3479999999999999643 3322211       12234445555542  2  2222222  2334445555 7899998


Q ss_pred             C---HHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCceeEEEEcCCHHHHHHHHHHhcCCe
Q 024414          179 D---VAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEQAFGME  255 (268)
Q Consensus       179 D---id~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~~s~~FY~~vlG~~  255 (268)
                      |   +++++++|.+.| .+.     .+.|     +++|..|..|.|+-+.     +.. .+.-.|.+++.+-++.++.|+
T Consensus        82 ~~eE~d~~f~~LsegG-~~~-----~~~G-----~v~DkFGV~Wqi~~~~-----~~~-~~~~~~~~~~~~~~~a~~~m~  144 (156)
T d1u69a_          82 DQAETDRLWNAIVDNG-GEE-----SACG-----WCRDKWGISWQITPRV-----LSE-AIASPDRAAARRAFEAMMTMG  144 (156)
T ss_dssp             SHHHHHHHHHHHHHTT-CEE-----CSTT-----EEECTTSCEEEEEEHH-----HHH-HHTCSSHHHHHHHHHHHTTCS
T ss_pred             CHHHHHHHHHHHhccC-CCC-----CCCe-----EEECCCCCEEEeChHH-----HHH-HhcCCCHHHHHHHHHHHHcCc
Confidence            7   667788887765 332     2233     6999999999999542     000 011246677777777777776


Q ss_pred             Ee
Q 024414          256 LL  257 (268)
Q Consensus       256 ~~  257 (268)
                      ..
T Consensus       145 k~  146 (156)
T d1u69a_         145 RI  146 (156)
T ss_dssp             SC
T ss_pred             Ce
Confidence            43

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=0.00037  Score=52.63  Aligned_cols=87  Identities=13%  Similarity=0.138  Sum_probs=61.0

Q ss_pred             CeeEEEEEECCHHHHHHHHH-HcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC------------CCCceeEE
Q 024414          169 GFGHFGIAVDDVAKTVELIK-AKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVM  235 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~-~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~------------~~~l~~v~  235 (268)
                      ++.||+|.|.|++++.+... ..|.+................+...-.+..+++.+....            +..+.|+.
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~hia   90 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIA   90 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEEEEE
Confidence            78899999999999999885 579987654332222222333333335556777765432            24578999


Q ss_pred             EEcCCHHHHHHHHHHhcCCeE
Q 024414          236 LRVGDLDRSINFYEQAFGMEL  256 (268)
Q Consensus       236 L~v~d~~~s~~FY~~vlG~~~  256 (268)
                      +.|.|++++.+-..+ .|.+.
T Consensus        91 f~V~di~~~~~~l~~-~G~~~  110 (149)
T d1sqia1          91 FEVEDCEHIVQKARE-RGAKI  110 (149)
T ss_dssp             EEEECHHHHHHHHHH-HTCCE
T ss_pred             EEeccHHHHHHHHHH-CCCEE
Confidence            999999999999977 67664

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=97.41  E-value=0.00077  Score=51.70  Aligned_cols=88  Identities=14%  Similarity=0.224  Sum_probs=63.8

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC---------------CCCc
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPL  231 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~---------------~~~l  231 (268)
                      .++.||+|.|.|++++.+..++ .|.+..........+.....++....+..++|.+....               ...+
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G~   85 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGV   85 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCce
Confidence            4788999999999999999987 79887643222222222334444446667888886542               2468


Q ss_pred             eeEEEEcCCHHHHHHHHHHhcCCeE
Q 024414          232 CQVMLRVGDLDRSINFYEQAFGMEL  256 (268)
Q Consensus       232 ~~v~L~v~d~~~s~~FY~~vlG~~~  256 (268)
                      +|+.+.|.|++++.+-..+ .|.+.
T Consensus        86 ~hiaf~VdDid~a~~~l~~-~Ga~~  109 (163)
T d1t47a1          86 VDLAIEVPDARAAHAYAIE-HGARS  109 (163)
T ss_dssp             EEEEEECSCHHHHHHHHHH-TTCCE
T ss_pred             EEEEEeeCCHHHHHHHHHH-CCCeE
Confidence            8999999999999999977 66654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=97.28  E-value=0.0013  Score=48.84  Aligned_cols=88  Identities=20%  Similarity=0.324  Sum_probs=64.4

Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcc----------cCCCCeEEEEEECCCC-CEEEEEEeCCC----------
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGP----------VKGGNTVIAFIEDPDG-YKFELLERGPT----------  227 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~----------~~~G~~~~~~~~DPdG-~~iEl~e~~~~----------  227 (268)
                      ++.|+++.|.|+++..+..++.|.++......          .+......+++..++| ..+++++....          
T Consensus         9 ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~   88 (149)
T d1ss4a_           9 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAP   88 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCC
T ss_pred             EEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccccccC
Confidence            67899999999999999999999877543221          1123346677777775 46777764311          


Q ss_pred             --CCCceeEEEEcCCHHHHHHHHHHhcCCeEe
Q 024414          228 --PEPLCQVMLRVGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       228 --~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~  257 (268)
                        ...+.|+.+.|.|+++..+.+++ .|.+..
T Consensus        89 ~~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~  119 (149)
T d1ss4a_          89 VNALGYLRVMFTVEDIDEMVSRLTK-HGAELV  119 (149)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHH-TTCEES
T ss_pred             CCCcceeEEEEeechhHHHHHHHHH-CCCeEc
Confidence              12367999999999999999987 788764

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=97.18  E-value=0.0015  Score=46.13  Aligned_cols=82  Identities=18%  Similarity=0.287  Sum_probs=62.4

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC-CCCCceeEEEEcCCHHHHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRSIN  246 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~-~~~~l~~v~L~v~d~~~s~~  246 (268)
                      ++.||.+.|+|+++..+...+ .|.++....    .+  ...++.++++..+.+.+... ......|+.+.+.|.+...+
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~f~v~~~~~v~~   76 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR----GN--AFAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE----TT--TEEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHH
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEee----cC--cceeeeecceeeeeeeeeecccccccceeeeeeccccchhh
Confidence            677999999999999998888 798875432    22  34677888899999987664 34568899999998777777


Q ss_pred             HHHHh--cCCeE
Q 024414          247 FYEQA--FGMEL  256 (268)
Q Consensus       247 FY~~v--lG~~~  256 (268)
                      ++.++  .|.++
T Consensus        77 ~~~~l~~~G~~~   88 (113)
T d1xqaa_          77 INQRLKEDGFLV   88 (113)
T ss_dssp             HHHHHHHTTCCC
T ss_pred             hhhhHHHcCCcc
Confidence            76654  56654

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=97.15  E-value=0.00011  Score=55.68  Aligned_cols=32  Identities=22%  Similarity=0.381  Sum_probs=29.1

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      .+|+|+.|.|.|++++.+||+++|||++..+.
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~   46 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEED   46 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeec
Confidence            45899999999999999999999999987763

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=97.12  E-value=0.002  Score=47.37  Aligned_cols=89  Identities=15%  Similarity=0.141  Sum_probs=65.6

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEE-----CCCCCEEEEEEeCCC-------------C
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIE-----DPDGYKFELLERGPT-------------P  228 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~-----DPdG~~iEl~e~~~~-------------~  228 (268)
                      .++.||++.|.|++++.+..++ .|.......... ..+....+..     ...+..+++++....             .
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~   84 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENP-EQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   84 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEET-TTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeec-ccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCC
Confidence            4788999999999999998877 677765443333 3334444444     356678999987532             2


Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      ..+.|+.+.|.|++++.+-.++ .|+++..
T Consensus        85 ~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~  113 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATLRE-RGVQLLY  113 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-HTCCBSC
T ss_pred             CcceEEEEecchHHHHHHHHHH-CCCEEeC
Confidence            3588999999999999999988 6988643

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=97.04  E-value=0.0034  Score=46.46  Aligned_cols=89  Identities=15%  Similarity=0.184  Sum_probs=58.7

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCC---CCEEEEEEeCCC------CCCceeEEEE
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPD---GYKFELLERGPT------PEPLCQVMLR  237 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPd---G~~iEl~e~~~~------~~~l~~v~L~  237 (268)
                      .|++||++.|.|+++..+...+ .|.++.........+....+++.+..   +..+.+.+....      ...+.|+.+.
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~   84 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLL   84 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEe
Confidence            5899999999999999999988 89987654333333333444555544   345555554432      2348999999


Q ss_pred             cCCHHHHHHHHHHh--cCCeE
Q 024414          238 VGDLDRSINFYEQA--FGMEL  256 (268)
Q Consensus       238 v~d~~~s~~FY~~v--lG~~~  256 (268)
                      |.|.+...++...+  .|...
T Consensus        85 v~~~~~l~~~~~~l~~~gv~~  105 (144)
T d1zswa1          85 VPSEDSLHYWKERFEKFDVKH  105 (144)
T ss_dssp             ESCHHHHHHHHHHHHHTTCEE
T ss_pred             cCCchhHHHHhhhhhccceee
Confidence            99966655554443  55554

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.03  E-value=0.002  Score=49.39  Aligned_cols=89  Identities=11%  Similarity=0.109  Sum_probs=59.9

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC---------------C----
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------T----  227 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~---------------~----  227 (268)
                      .++.||+|.|.|++++.+...+ .|.+................+.....+..+.+.....               .    
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFD   90 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCC
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccccCC
Confidence            3788999999999999999986 8988754432222222333443443444444443321               0    


Q ss_pred             -----------CCCceeEEEEcCCHHHHHHHHHHhcCCeEe
Q 024414          228 -----------PEPLCQVMLRVGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       228 -----------~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~  257 (268)
                                 ...+.|+.|.|.|++++.+...+ .|.+..
T Consensus        91 ~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~  130 (167)
T d1sqda1          91 HGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVA-NGAIPS  130 (167)
T ss_dssp             HHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHH-TTCCEE
T ss_pred             cchHHHhhhccCCCceEEEEEeCCHHHHHHHHHH-CCCEEe
Confidence                       12579999999999999999987 577654

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.83  E-value=0.00036  Score=50.48  Aligned_cols=30  Identities=13%  Similarity=0.053  Sum_probs=27.1

Q ss_pred             ceeEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          231 LCQVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       231 l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      |.|+.|.|.|++++.+||+++||++.....
T Consensus         3 l~~i~i~V~di~~a~~FYe~~lg~~~~~~~   32 (115)
T d2i7ra1           3 LNQLDIIVSNVPQVCADLEHILDKKADYAN   32 (115)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTSCCSEEE
T ss_pred             ceEEEEEECCHHHHHHHHHHhhCCceeeec
Confidence            689999999999999999999999976543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=96.82  E-value=0.0043  Score=47.87  Aligned_cols=89  Identities=15%  Similarity=0.142  Sum_probs=59.5

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC--------------------
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------------------  227 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~--------------------  227 (268)
                      ++.||+|.|.|++++.+...+ .|.+................+.....+..+.+......                    
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARRF   92 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHHH
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchhhhh
Confidence            788999999999999999876 89887643222222222333333333444545433211                    


Q ss_pred             ----CCCceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          228 ----PEPLCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       228 ----~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                          ...++|+.|.|.|++++.+-..+ .|-++..
T Consensus        93 ~~~~g~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~  126 (172)
T d1sp8a1          93 AADHGLAVRAVALRVADAEDAFRASVA-AGARPAF  126 (172)
T ss_dssp             HHHHSSEEEEEEEEESCHHHHHHHHHT-TTCCEEE
T ss_pred             hhhcCCceEEEEEeeCcHHHHHHHHHH-CcCEecc
Confidence                13579999999999999999977 7776543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.58  E-value=0.006  Score=46.32  Aligned_cols=84  Identities=19%  Similarity=0.271  Sum_probs=56.2

Q ss_pred             CCCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcc-c-CCCCeEEEEEE-CCCCCEEEEEEeCCCCCCceeEEEEcCCHH
Q 024414          167 GTGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGP-V-KGGNTVIAFIE-DPDGYKFELLERGPTPEPLCQVMLRVGDLD  242 (268)
Q Consensus       167 g~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~-~-~~G~~~~~~~~-DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~  242 (268)
                      +.|+.|+++.|.|+++..+-.++ .|.++...... . ..+.....++. +++-+.+.+.. .+.+..+.|+.+.|.+.+
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~-~~~~~gl~Hiaf~v~~~d   86 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAA-FPIPKRIHHFMLQANTID   86 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEEC-CSCSSSEEEEEEEBSSHH
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeecc-CCCCCceeEEEEECCCHH
Confidence            35899999999999999998886 89887543221 1 11122233333 45566665543 344567999999998887


Q ss_pred             HHHHHHHHh
Q 024414          243 RSINFYEQA  251 (268)
Q Consensus       243 ~s~~FY~~v  251 (268)
                      ...+.+..+
T Consensus        87 dv~~~~d~l   95 (156)
T d1kw3b2          87 DVGYAFDRL   95 (156)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            766665543

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=96.58  E-value=0.0011  Score=47.26  Aligned_cols=29  Identities=17%  Similarity=0.397  Sum_probs=25.1

Q ss_pred             eEEEEcCCHHHHHHHHHHhcCCeEeeeec
Q 024414          233 QVMLRVGDLDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       233 ~v~L~v~d~~~s~~FY~~vlG~~~~~~~~  261 (268)
                      .-+|.|.|++++++||+++|||++..+..
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~   35 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED   35 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC
Confidence            34589999999999999999999877644

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=96.54  E-value=0.01  Score=48.08  Aligned_cols=83  Identities=13%  Similarity=0.045  Sum_probs=59.6

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCC----cccCCCCeEEEEEECCCCC-EEEEEEeCCC---------------
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREP----GPVKGGNTVIAFIEDPDGY-KFELLERGPT---------------  227 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p----~~~~~G~~~~~~~~DPdG~-~iEl~e~~~~---------------  227 (268)
                      .+.||++.|+|++++.+..++ .|.......    ...+.+..+...+..|+|. .+++.|....               
T Consensus         9 ~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL~~~~   88 (224)
T d1sp8a2           9 RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHG   88 (224)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHHT
T ss_pred             eeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHHHhcc
Confidence            577999999999999999888 788654321    1223344577788899874 4777765321               


Q ss_pred             CCCceeEEEEcCCHHHHHHHHHHh
Q 024414          228 PEPLCQVMLRVGDLDRSINFYEQA  251 (268)
Q Consensus       228 ~~~l~~v~L~v~d~~~s~~FY~~v  251 (268)
                      ...+.|+.|.|.|++++++..++.
T Consensus        89 g~GiqHIAf~vdDI~~av~~L~ar  112 (224)
T d1sp8a2          89 GPGVQHMALASDDVLRTLREMQAR  112 (224)
T ss_dssp             SSEEEEEEEEETTHHHHHHHHHTS
T ss_pred             CCCceeEEEEeCCHHHHHHHHHhc
Confidence            135899999999999999999764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=96.54  E-value=0.012  Score=44.66  Aligned_cols=82  Identities=15%  Similarity=0.131  Sum_probs=59.8

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCceeEEEEcCCHHHHHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINF  247 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~~s~~F  247 (268)
                      .+.||++.|.|+++..+-..+ .|.++..... ...+.....++....+.........+.+..+.|+.+.+.+.+...++
T Consensus         5 rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~   83 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFTKVLGFYLAEQVL-DENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRA   83 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEEE-CTTCCEEEEEEESSSBSCSEEEEECSSSSEEEEEEEECSCHHHHHHH
T ss_pred             cccEEEEECCCHHHHHHHHHHccCCEEEEEEc-cccccceeeeeecccccccccccccCCCCccceeEEEEeeehhhhhH
Confidence            478999999999999998887 8888765422 22333444555555555555666667777899999999999987777


Q ss_pred             HHHh
Q 024414          248 YEQA  251 (268)
Q Consensus       248 Y~~v  251 (268)
                      +..+
T Consensus        84 ~~~L   87 (162)
T d1mpya2          84 ADLI   87 (162)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7554

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=96.46  E-value=0.00069  Score=50.30  Aligned_cols=32  Identities=22%  Similarity=0.429  Sum_probs=26.9

Q ss_pred             eeEEEEcCCHHHHHHHHHHhcCCeEeeeecCC
Q 024414          232 CQVMLRVGDLDRSINFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       232 ~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p  263 (268)
                      ..|.+.|.|++++++||+++|||++.++.+.+
T Consensus        11 ~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~   42 (137)
T d1twua_          11 IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH   42 (137)
T ss_dssp             EEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE
T ss_pred             EEEecccCCHHHHHHHHHhccCCceeeeeccc
Confidence            35777889999999999999999987775544

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=96.45  E-value=0.0084  Score=46.12  Aligned_cols=83  Identities=13%  Similarity=0.087  Sum_probs=54.8

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEEC--CCCCEEEEEEeCC-----CCCCceeEEEEcC
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIED--PDGYKFELLERGP-----TPEPLCQVMLRVG  239 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~D--PdG~~iEl~e~~~-----~~~~l~~v~L~v~  239 (268)
                      .|+.||+|.|.|+++..+...+ .|.++....     +. ...+...  ..+..+.+.....     ....++|+.+.|.
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN-----DQ-EAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC-----SS-EEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec-----Cc-eEEEEeccCccceEEEeccccccccccCccccceEEEEeC
Confidence            5899999999999999999998 798876432     12 2233332  2233333333322     2345889999999


Q ss_pred             CHHHHHHHHHHh--cCCeE
Q 024414          240 DLDRSINFYEQA--FGMEL  256 (268)
Q Consensus       240 d~~~s~~FY~~v--lG~~~  256 (268)
                      |.+...+++.++  .|+.+
T Consensus        85 ~~~~l~~~~~~l~~~G~~~  103 (170)
T d1zswa2          85 NDAELAYWEEQVKQRGFHS  103 (170)
T ss_dssp             SHHHHHHHHHHHHHTTCCC
T ss_pred             ChHHHHHHHHHHHhcCCCc
Confidence            988777777765  45544

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=96.24  E-value=0.0029  Score=48.14  Aligned_cols=85  Identities=15%  Similarity=0.217  Sum_probs=59.5

Q ss_pred             CCeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCC----------CCCceeEEEE
Q 024414          168 TGFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------PEPLCQVMLR  237 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~----------~~~l~~v~L~  237 (268)
                      .|+.||.|.|+|++++.+.+.+.|.+......   ..  ....+..  |....++...+.          ...++|+.|.
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~lGF~~~~~~~---~~--~~~l~~~--G~i~ll~~~~~~s~~~~~~~~hg~gv~hiaf~   80 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEIMGFTKVATHR---SK--NVHLYRQ--GEINLILNNEPNSIASYFAAEHGPSVCGMAFR   80 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHHTTCEEEEEES---SS--SEEEEEE--TTEEEEEECCSSSHHHHHHHHHSSEEEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHHhCCEEEeccc---ce--EEEEEec--CcEEEEecCCCCCHhHhHHhhCCCceEEEEEE
Confidence            48899999999999999999999998764321   11  1222332  333333333321          2468999999


Q ss_pred             cCCHHHHHHHHHHhcCCeEeeee
Q 024414          238 VGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       238 v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      |.|++++.+...+ .|.++....
T Consensus        81 V~D~~~a~~~a~~-~Ga~~i~~~  102 (150)
T d1cjxa1          81 VKDSQKAYNRALE-LGAQPIHID  102 (150)
T ss_dssp             ESCHHHHHHHHHH-TTCCBCCCC
T ss_pred             eCCHHHHHHHHHH-CCCEEcccC
Confidence            9999999999976 888866543

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=96.17  E-value=0.002  Score=46.12  Aligned_cols=25  Identities=20%  Similarity=0.353  Sum_probs=22.9

Q ss_pred             EEEcCCHHHHHHHHHHhcCCeEeee
Q 024414          235 MLRVGDLDRSINFYEQAFGMELLRK  259 (268)
Q Consensus       235 ~L~v~d~~~s~~FY~~vlG~~~~~~  259 (268)
                      +|.|.|++++.+||+++|||++...
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~   34 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEec
Confidence            4899999999999999999998665

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.86  E-value=0.0021  Score=45.14  Aligned_cols=28  Identities=18%  Similarity=0.325  Sum_probs=24.7

Q ss_pred             eEEEEcCCHHHHHHHHHHhcCCeEeeee
Q 024414          233 QVMLRVGDLDRSINFYEQAFGMELLRKR  260 (268)
Q Consensus       233 ~v~L~v~d~~~s~~FY~~vlG~~~~~~~  260 (268)
                      +..|.|.|++++.+||+++|||++....
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~   32 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDH   32 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeecc
Confidence            4678999999999999999999987654

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.73  E-value=0.0028  Score=46.56  Aligned_cols=31  Identities=19%  Similarity=0.401  Sum_probs=22.2

Q ss_pred             eEEEEcCCHHHHHHHHHHhcCCeEeeeecCC
Q 024414          233 QVMLRVGDLDRSINFYEQAFGMELLRKRDNP  263 (268)
Q Consensus       233 ~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~p  263 (268)
                      .+.+.+.|.++|++||+++||+++..+...+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~   40 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYP   40 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC------
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecC
Confidence            4567778999999999999999987665544

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=95.69  E-value=0.026  Score=43.49  Aligned_cols=80  Identities=15%  Similarity=0.195  Sum_probs=55.4

Q ss_pred             CeeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEE-CCCCCEEEEEEeCCCCCCceeEEEEcCCHHHHHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIE-DPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINF  247 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~-DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~~s~~F  247 (268)
                      .+.||+|.|.|+++..+..+..|.++..... .+.+....+++. +...+.+.+...  ....+.|+.+.+.+++...+.
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~-~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~H~~f~~~~~~~v~~~   81 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSEDIK-DSDGVTYAAWMHRKQTVHDTALTGG--NGPRMHHVAFATHEKHNIIQI   81 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEEEE-CTTCCEEEEEEESSSSSCSEEEEES--SBSEEEEEEEECSSHHHHHHH
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEEEe-cCCcceeeeeeccCccccceecccc--cCCCccceeEEeccchhHHHH
Confidence            4679999999999999989889998764322 223333344444 444455555433  345789999999988888877


Q ss_pred             HHHh
Q 024414          248 YEQA  251 (268)
Q Consensus       248 Y~~v  251 (268)
                      +..+
T Consensus        82 ~~~l   85 (176)
T d1f1ua2          82 CDKM   85 (176)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=95.45  E-value=0.041  Score=39.88  Aligned_cols=79  Identities=18%  Similarity=0.231  Sum_probs=52.9

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEE-CCCCCEEEEEEeCCCCCCceeEEEEcCCHHH---
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIE-DPDGYKFELLERGPTPEPLCQVMLRVGDLDR---  243 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~-DPdG~~iEl~e~~~~~~~l~~v~L~v~d~~~---  243 (268)
                      ++.||+|.|+|++++.+..++ .|..+....    .+   .++++ |-..+.+.+.+.  ....+.|+.+.+.+.+.   
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~----~~---~~~l~~~~~~~~l~l~~~--~~~~~~h~~f~v~~~~dl~~   74 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT----DN---GDLFRIDSRAWRIAVQQG--EVDDLAFAGYEVADAAGLAQ   74 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE----TT---EEEEESSSBSCSEEEEEC--TTCEEEEEEEEESSHHHHHH
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecC----Cc---ceEEeecCCceEEEEecC--CCCCceEEEEEEccHHHHHH
Confidence            678999999999999999999 698876431    12   24555 434455665543  34578899999976555   


Q ss_pred             HHHHHHHhcCCeEe
Q 024414          244 SINFYEQAFGMELL  257 (268)
Q Consensus       244 s~~FY~~vlG~~~~  257 (268)
                      ..+.+++ .|.++.
T Consensus        75 ~~~~l~~-~g~~~~   87 (131)
T d1lgta1          75 MADKLKQ-AGIAVT   87 (131)
T ss_dssp             HHHHHHH-TTCCCE
T ss_pred             HHHHHHH-cCCceE
Confidence            4444443 455543

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=95.26  E-value=0.067  Score=38.13  Aligned_cols=88  Identities=10%  Similarity=0.222  Sum_probs=60.3

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC-CCCCceeEEEEc--CCHHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRV--GDLDRS  244 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~-~~~~l~~v~L~v--~d~~~s  244 (268)
                      |+.|+.+.|.|++++.+...+ .|.++...............++ ...+..+++.+..+ ......|+.+.+  .|++++
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~dv~~~   82 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFF-LIGDIWVAIMQGEKLAERSYNHIAFKIDDADFDRY   82 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEE-EETTEEEEEEECCCCSSCCSCEEEEECCGGGHHHH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEE-ecCCEEEeecccccccccceeeeeecccHHHHHHH
Confidence            688999999999999998876 7888765433332222223333 34567777777665 345678888876  578888


Q ss_pred             HHHHHHhcCCeEee
Q 024414          245 INFYEQAFGMELLR  258 (268)
Q Consensus       245 ~~FY~~vlG~~~~~  258 (268)
                      .+...+ -|.++..
T Consensus        83 ~~~l~~-~gv~i~~   95 (130)
T d1r9ca_          83 AERVGK-LGLDMRP   95 (130)
T ss_dssp             HHHHHH-HTCCBCC
T ss_pred             HHHHHH-CCCeEec
Confidence            888876 5777543

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0071  Score=48.63  Aligned_cols=33  Identities=12%  Similarity=0.237  Sum_probs=28.1

Q ss_pred             CCceeEEEEcCC--HHHHHHHHHHhcCCeEeeeec
Q 024414          229 EPLCQVMLRVGD--LDRSINFYEQAFGMELLRKRD  261 (268)
Q Consensus       229 ~~l~~v~L~v~d--~~~s~~FY~~vlG~~~~~~~~  261 (268)
                      ..+||+.+.|.+  ++++++||+++|||+.....+
T Consensus        23 ~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~   57 (210)
T d1sqia2          23 EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVD   57 (210)
T ss_dssp             EEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-
T ss_pred             ceeCceEeccCchhHHHHHHHHHHHhCCEEEEEec
Confidence            468999999976  999999999999998766544

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=94.99  E-value=0.065  Score=38.21  Aligned_cols=84  Identities=18%  Similarity=0.193  Sum_probs=57.6

Q ss_pred             eeEEEEEECCHHHHHHHHHHcCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeC-----------CCCCCceeEEEEc
Q 024414          170 FGHFGIAVDDVAKTVELIKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG-----------PTPEPLCQVMLRV  238 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~-----------~~~~~l~~v~L~v  238 (268)
                      +.|+++.|.|+++..+..++.|..+.....   .+.  .+.+..+.+..+.+.+..           +.+....|+.+.|
T Consensus         3 i~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v   77 (128)
T d1klla_           3 ISLFAVVVEDMAKSMEFYRKMGVEIPAEAD---SAP--HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEF   77 (128)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCCCTTGG---GCS--EEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEEC
T ss_pred             EeEEEEEcCCHHHHHHHHHHhCCccccccc---ccc--ceeeeccceeeeeecccccccccCCCCCCCccccceeEeeee
Confidence            569999999999999999888887653322   222  245556677777776532           1234567899999


Q ss_pred             CCHHHHHHHHHHh--cCCeEee
Q 024414          239 GDLDRSINFYEQA--FGMELLR  258 (268)
Q Consensus       239 ~d~~~s~~FY~~v--lG~~~~~  258 (268)
                      .+.+...+.|+++  .|.++..
T Consensus        78 ~~~~~l~~~~~~l~~~G~~~~~   99 (128)
T d1klla_          78 PDTASVDKKYAELVDAGYEGHL   99 (128)
T ss_dssp             SSHHHHHHHHHHHHHTTCEEEE
T ss_pred             ccchhhHHHHHHHHhccCcccc
Confidence            8877766666665  6666543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.14  E-value=0.08  Score=38.31  Aligned_cols=79  Identities=22%  Similarity=0.315  Sum_probs=52.7

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEEC-CCCCEEEEEEeCCCCCCceeEEEEcCC---HHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIED-PDGYKFELLERGPTPEPLCQVMLRVGD---LDR  243 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~D-PdG~~iEl~e~~~~~~~l~~v~L~v~d---~~~  243 (268)
                      .+.||+|.|+|+++..+...+ .|.++....     ++  .++++- -..+.+.+..  .....+.|+.+.+.+   +++
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~-----~~--~~~l~~~~~~~~l~~~~--~~~~~~~h~~f~v~~~~dl~~   74 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA-----GD--AALYRADQRAWRIAVQP--GELDDLAYAGLEVDDAAALER   74 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE-----TT--EEEEESSSBSCSEEEEE--CTTCEEEEEEEECSSHHHHHH
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceeccc-----cc--eeeeeeeecceeeeeec--cCCCCceEEEEEeccHHHHHH
Confidence            578999999999999999999 599875431     12  245553 2333444433  335578999999965   556


Q ss_pred             HHHHHHHhcCCeEe
Q 024414          244 SINFYEQAFGMELL  257 (268)
Q Consensus       244 s~~FY~~vlG~~~~  257 (268)
                      ..+..++ .|.++.
T Consensus        75 ~~~~l~~-~g~~~~   87 (132)
T d1kw3b1          75 MADKLRQ-AGVAFT   87 (132)
T ss_dssp             HHHHHHH-HTCCCE
T ss_pred             HHHHHHH-cCCCce
Confidence            6666655 466544

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=93.99  E-value=0.16  Score=39.96  Aligned_cols=89  Identities=15%  Similarity=0.122  Sum_probs=62.8

Q ss_pred             CeeEEEEEEC--CHHHHHHHHHH-cCCeEeeCCc-ccCCCCeEEEEEECCC-CCEEEEEEeCCC-------------CCC
Q 024414          169 GFGHFGIAVD--DVAKTVELIKA-KGGKVTREPG-PVKGGNTVIAFIEDPD-GYKFELLERGPT-------------PEP  230 (268)
Q Consensus       169 g~~hi~f~V~--Did~~~~~L~~-~G~~i~~~p~-~~~~G~~~~~~~~DPd-G~~iEl~e~~~~-------------~~~  230 (268)
                      .+.||++.|+  |++++++..++ .|.+...... ..+.+..+...+.+|+ +..+.+.++...             ...
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~G   84 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEG   84 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSB
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCC
Confidence            4679999998  89999998876 5887653311 2223444666677887 455555554432             135


Q ss_pred             ceeEEEEcCCHHHHHHHHHHhcCCeEee
Q 024414          231 LCQVMLRVGDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       231 l~~v~L~v~d~~~s~~FY~~vlG~~~~~  258 (268)
                      +.|+.|.|.|+.++++..++ -|++...
T Consensus        85 iqHIAf~vdDI~aav~~L~~-~Gv~fL~  111 (203)
T d1cjxa2          85 IQHVAFLTDDLVKTWDALKK-IGMRFMT  111 (203)
T ss_dssp             CCEEEEEESCHHHHHHHHHH-TTCCBCC
T ss_pred             CceEEEEeCCHHHHHHHHHh-cCCcccc
Confidence            89999999999999999977 6877543

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=93.96  E-value=0.1  Score=37.78  Aligned_cols=82  Identities=16%  Similarity=0.152  Sum_probs=53.6

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC------CCCCceeEEEEc--
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------TPEPLCQVMLRV--  238 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~------~~~~l~~v~L~v--  238 (268)
                      .|+.||+|.|.|++++.+..++ .|.++....     +. ...+..  .+..+.+.....      ....+.|+.+.+  
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~-----~~-~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~h~~~~~~~   74 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARW-----NT-GAYLTC--GDLWVCLSYDEARQYVPPQESDYTHYAFTVAE   74 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEE-----TT-EEEEEE--TTEEEEEEECTTCCCCCGGGSCSCEEEEECCH
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe-----cc-cccccc--ccccceeecccccccCCCcCCccceeeeechH
Confidence            4789999999999999999987 888875431     11 222222  333333433322      124567888887  


Q ss_pred             CCHHHHHHHHHHhcCCeEee
Q 024414          239 GDLDRSINFYEQAFGMELLR  258 (268)
Q Consensus       239 ~d~~~s~~FY~~vlG~~~~~  258 (268)
                      .|+++..+...+ .|.++..
T Consensus        75 ~d~~~~~~~l~~-~Gv~~~~   93 (140)
T d1npba_          75 EDFEPLSQRLEQ-AGVTIWK   93 (140)
T ss_dssp             HHHHHHHHHHHH-TTCCEEE
T ss_pred             HHHHHHHHHHHH-CCCeEee
Confidence            678888888866 6877543

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=93.57  E-value=0.33  Score=38.06  Aligned_cols=89  Identities=15%  Similarity=0.140  Sum_probs=64.7

Q ss_pred             CCeeEEEEEEC--CHHHHHHHHHH-cCCeEeeCC----cccCCCCeEEEEEECCCCCE-EEEEEeCCC------------
Q 024414          168 TGFGHFGIAVD--DVAKTVELIKA-KGGKVTREP----GPVKGGNTVIAFIEDPDGYK-FELLERGPT------------  227 (268)
Q Consensus       168 ~g~~hi~f~V~--Did~~~~~L~~-~G~~i~~~p----~~~~~G~~~~~~~~DPdG~~-iEl~e~~~~------------  227 (268)
                      .++.||++.|+  ++++++...++ .|.......    ...+.+..+...+.+|+|.. +-+.++.+.            
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~~   84 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEF   84 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhhh
Confidence            47889999998  99999999987 588754321    11234556777788998754 445554432            


Q ss_pred             --CCCceeEEEEcCCHHHHHHHHHHhcCCeEe
Q 024414          228 --PEPLCQVMLRVGDLDRSINFYEQAFGMELL  257 (268)
Q Consensus       228 --~~~l~~v~L~v~d~~~s~~FY~~vlG~~~~  257 (268)
                        ...+.|+.|.|.|+.++++-.++ -|.+..
T Consensus        85 ~~g~GiQHIAl~tdDI~~av~~L~~-~G~~fL  115 (199)
T d1t47a2          85 YGGAGVQHIALNTGDIVETVRTMRA-AGVQFL  115 (199)
T ss_dssp             HTSCEEEEEEEECSCHHHHHHHHHH-TTCCBC
T ss_pred             cCCCcceEEEEEcCCHHHHHHHHHH-cCCCCC
Confidence              13689999999999999999976 666543

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.48  E-value=0.028  Score=45.56  Aligned_cols=34  Identities=12%  Similarity=0.157  Sum_probs=29.6

Q ss_pred             CCceeEEEEcCCHHHHHHHHHHhcCCeEeeeecC
Q 024414          229 EPLCQVMLRVGDLDRSINFYEQAFGMELLRKRDN  262 (268)
Q Consensus       229 ~~l~~v~L~v~d~~~s~~FY~~vlG~~~~~~~~~  262 (268)
                      .++|||.++|.|++++.+||+++||+........
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~   54 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTA   54 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC-
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecc
Confidence            5789999999999999999999999987766543

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=90.93  E-value=0.58  Score=33.53  Aligned_cols=84  Identities=14%  Similarity=0.027  Sum_probs=50.0

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCCCCCCceeEEEEc---CCHHHH
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRV---GDLDRS  244 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~~~~~l~~v~L~v---~d~~~s  244 (268)
                      .+.||+|.|+|+++..+...+ .|..+....    .+........+..+.........+. ....|+.+.+   .|+++.
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dl~~~   81 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDRD----DQGRVYLKAWTEVDKFSLVLREADE-PGMDFMGFKVVDEDALRQL   81 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----TTSCEEEECTTCCBSCSEEEEECSS-CEEEEEEEEESCHHHHHHH
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEee----ccCccceecccccceeeccccccCc-ccceeeeeeehhHHHHHHH
Confidence            467999999999999999986 798875431    1222333344544444444444332 2345555554   456666


Q ss_pred             HHHHHHhcCCeEee
Q 024414          245 INFYEQAFGMELLR  258 (268)
Q Consensus       245 ~~FY~~vlG~~~~~  258 (268)
                      .+..++ .|.++.+
T Consensus        82 ~~~L~~-~g~~~~~   94 (145)
T d1mpya1          82 ERDLMA-YGCAVEQ   94 (145)
T ss_dssp             HHHHHH-HTCCCEE
T ss_pred             HHHHHH-CCCcEEE
Confidence            665544 6666544

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=90.28  E-value=1.8  Score=29.53  Aligned_cols=87  Identities=17%  Similarity=0.158  Sum_probs=54.3

Q ss_pred             eeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCE---EEEEEeCC-----CCCCceeEEEEcCC
Q 024414          170 FGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYK---FELLERGP-----TPEPLCQVMLRVGD  240 (268)
Q Consensus       170 ~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~---iEl~e~~~-----~~~~l~~v~L~v~d  240 (268)
                      +.|++|.|.|++++.+...+ .|.++....... .+.........-....   .+......     ......++.+.+.+
T Consensus         3 l~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (135)
T d1f9za_           3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENP-EYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEET-TTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             ceEEEEEcCCHHHHHHHHHHHhCCEEEeecccc-ccceeeeeeccceeeeccccccccccccccccccccceeeccchHH
Confidence            56999999999999998887 798876543222 2333333333222222   22222111     12356788899999


Q ss_pred             HHHHHHHHHHhcCCeEee
Q 024414          241 LDRSINFYEQAFGMELLR  258 (268)
Q Consensus       241 ~~~s~~FY~~vlG~~~~~  258 (268)
                      +++..+-.+. .|..+..
T Consensus        82 ~~~~~~~~~~-~g~~~~~   98 (135)
T d1f9za_          82 AAEACEKIRQ-NGGNVTR   98 (135)
T ss_dssp             HHHHHHHHHH-TTCEEEE
T ss_pred             HHHHHHHHHH-cCCCeec
Confidence            9999988765 6666544

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.38  E-value=0.45  Score=33.72  Aligned_cols=82  Identities=13%  Similarity=0.248  Sum_probs=52.9

Q ss_pred             CCeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCCEEEEEEeCC---CCCCceeEEEEc--CCH
Q 024414          168 TGFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---TPEPLCQVMLRV--GDL  241 (268)
Q Consensus       168 ~g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~~iEl~e~~~---~~~~l~~v~L~v--~d~  241 (268)
                      .++.||+|.|.|++++.+..++ .|.++....     +...  ++ +..+..+.......   ......|+.+.+  .|+
T Consensus         3 ~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~-----~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~dl   74 (134)
T d1nkia_           3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARW-----DQGA--YL-ELGSLWLCLSREPQYGGPAADYTHYAFGIAAADF   74 (134)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE-----TTEE--EE-EETTEEEEEEECTTCCCCCSSSCEEEEEECHHHH
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHhhCCeEEEec-----ccee--ee-ecCCeEEEEeeeccccccccccccchhccccchH
Confidence            3688999999999999998888 677764321     1222  22 22455555555443   234566766665  688


Q ss_pred             HHHHHHHHHhcCCeEee
Q 024414          242 DRSINFYEQAFGMELLR  258 (268)
Q Consensus       242 ~~s~~FY~~vlG~~~~~  258 (268)
                      +++.+...+ .|.++..
T Consensus        75 ~~~~~~l~~-~G~~~~~   90 (134)
T d1nkia_          75 ARFAAQLRA-HGVREWK   90 (134)
T ss_dssp             HHHHHHHHH-TTCCEEE
T ss_pred             HHHHHHHHH-CCCcCcc
Confidence            888887766 5776544

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=86.21  E-value=3.7  Score=31.35  Aligned_cols=87  Identities=14%  Similarity=0.093  Sum_probs=52.2

Q ss_pred             cCceeeEEEEEeCCHHHHHHHHHhhcCC-EEEEEecCCCCceeEEEE----eeCCCCceEEEEEeeccCCCCCCCCCCee
Q 024414           97 DKRRMLHVVYRVGDLDRTIKFYTECLGM-KLLRKRDIPEEKYTNAFL----GYGPEDSHFVIELTYNYGVDKYDIGTGFG  171 (268)
Q Consensus        97 ~~~~l~HV~l~V~Dle~a~~FY~~vLG~-~~~~~~~~~~~~~~~~~l----~~g~~~~~~~lel~~~~~~~~~~~g~g~~  171 (268)
                      ....++|++++|.+.+.|.+|-+..+-. ++.......+.....+-+    .+++. ..-++|+.++.. ..| .-.|--
T Consensus        40 ~~~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~-~I~ciELP~P~~-k~Y-p~eGWE  116 (190)
T d1k4na_          40 TPLTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHW-QFSIVELPWPGE-KRY-PHEGWE  116 (190)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTE-EEEEEEEECCCS-SCC-SSCEEE
T ss_pred             hhccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCc-EEEEEEeCCCCC-CCC-CCCCce
Confidence            3568899999999999999999998865 333333333322222222    23332 223577777543 222 335888


Q ss_pred             EEEEEECC-HHHHHHH
Q 024414          172 HFGIAVDD-VAKTVEL  186 (268)
Q Consensus       172 hi~f~V~D-id~~~~~  186 (268)
                      ||-+.++- .+.+.++
T Consensus       117 HIElVlp~~~~t~~~~  132 (190)
T d1k4na_         117 HIEIVLPGDPETLNAR  132 (190)
T ss_dssp             EEEEECCSCGGGHHHH
T ss_pred             EEEEEecCCHHHHHHH
Confidence            99999983 3444433

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=83.70  E-value=4.2  Score=27.54  Aligned_cols=82  Identities=16%  Similarity=0.131  Sum_probs=48.9

Q ss_pred             CeeEEEEEECCHHHHHHHHHH-cCCeEeeCCcccCCCCeEEEEEECCCCC--EEEEEEe-CC-----CCCCceeEEEEcC
Q 024414          169 GFGHFGIAVDDVAKTVELIKA-KGGKVTREPGPVKGGNTVIAFIEDPDGY--KFELLER-GP-----TPEPLCQVMLRVG  239 (268)
Q Consensus       169 g~~hi~f~V~Did~~~~~L~~-~G~~i~~~p~~~~~G~~~~~~~~DPdG~--~iEl~e~-~~-----~~~~l~~v~L~v~  239 (268)
                      -+.|++|.|.|+++..+...+ .|.++....... .+.........-...  ....... ..     ......++...+.
T Consensus         3 r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           3 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVP-EDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEG-GGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             ceEEEEEEeCCHHHHHHHHHHHhCCEeecccccc-ccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            367999999999999999888 898875442222 222222333221111  1111111 11     1234567778889


Q ss_pred             CHHHHHHHHHHh
Q 024414          240 DLDRSINFYEQA  251 (268)
Q Consensus       240 d~~~s~~FY~~v  251 (268)
                      ++++..+...+.
T Consensus        82 ~~~~~~~~~~~~   93 (139)
T d2c21a1          82 DVKELVADMRKH   93 (139)
T ss_dssp             CHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHc
Confidence            999998888764