Citrus Sinensis ID: 024415
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 268 | ||||||
| 255541628 | 268 | conserved hypothetical protein [Ricinus | 1.0 | 1.0 | 0.895 | 1e-135 | |
| 358249046 | 268 | uncharacterized protein LOC100810003 [Gl | 1.0 | 1.0 | 0.843 | 1e-134 | |
| 224127704 | 268 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.869 | 1e-131 | |
| 388500274 | 268 | unknown [Lotus japonicus] | 1.0 | 1.0 | 0.839 | 1e-127 | |
| 449441454 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 1.0 | 0.865 | 1e-127 | |
| 225454274 | 268 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 1.0 | 0.861 | 1e-126 | |
| 357507383 | 268 | hypothetical protein MTR_7g077870 [Medic | 1.0 | 1.0 | 0.824 | 1e-126 | |
| 297824659 | 268 | hypothetical protein ARALYDRAFT_904052 [ | 1.0 | 1.0 | 0.832 | 1e-125 | |
| 18406942 | 268 | uncharacterized protein [Arabidopsis tha | 1.0 | 1.0 | 0.828 | 1e-123 | |
| 147782417 | 275 | hypothetical protein VITISV_002394 [Viti | 1.0 | 0.974 | 0.836 | 1e-123 |
| >gi|255541628|ref|XP_002511878.1| conserved hypothetical protein [Ricinus communis] gi|223549058|gb|EEF50547.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/268 (89%), Positives = 260/268 (97%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDS +E+WIVDQM I+RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSALEEWIVDQMFIVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE+RMPSIRKSSV+EGLTVEGILENWSK+KPVIME+W E+RD+L+ LFG
Sbjct: 61 GYENLLLVRLLLEMRMPSIRKSSVAEGLTVEGILENWSKLKPVIMEEWGEDRDSLIHLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
K+RDEWMDKDL TWI ANRFYPG+PDALKFASSRIYIVTTKQSRFADALLRELAG+TIPP
Sbjct: 121 KIRDEWMDKDLATWIAANRFYPGVPDALKFASSRIYIVTTKQSRFADALLRELAGLTIPP 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
++IYGLGTGPKV+VLKQLQ+KPE QG+TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY
Sbjct: 181 EKIYGLGTGPKVKVLKQLQEKPEYQGLTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NTQKEREEAASIPRI+LLQLSDFS+KLK
Sbjct: 241 NTQKEREEAASIPRIRLLQLSDFSKKLK 268
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358249046|ref|NP_001239728.1| uncharacterized protein LOC100810003 [Glycine max] gi|255647823|gb|ACU24371.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/268 (84%), Positives = 252/268 (94%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M +LYALDFDGV+CDSCGESSLSA+KAAKVRWPGLFDGVDS E+WI+DQMH +RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVDSTTENWIIDQMHTVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYEN+LLVRLLLE R P+IRKSSV+EGLTVEGILENWSK+KP+IME+W E RD L+DLFG
Sbjct: 61 GYENVLLVRLLLESRTPTIRKSSVAEGLTVEGILENWSKLKPIIMEEWDEKRDDLIDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRDEW+++D TWIGANR YPG+ DALKFASSR+YIVTTKQSRFADALLRELAGVTIPP
Sbjct: 121 KVRDEWLEQDFATWIGANRLYPGVSDALKFASSRVYIVTTKQSRFADALLRELAGVTIPP 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLGTGPKVEVLKQLQKKPE QG+TLHFVEDRLATLKNVIKEPELD WNLYLG+WGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKKPEHQGLTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NTQKEREEAA+IPRI +L+LS+FS+KLK
Sbjct: 241 NTQKEREEAAAIPRIHVLELSNFSKKLK 268
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127704|ref|XP_002320140.1| predicted protein [Populus trichocarpa] gi|222860913|gb|EEE98455.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/268 (86%), Positives = 255/268 (95%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LFD VDS ++DWIVDQMHI+RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPVLFDTVDSTLQDWIVDQMHIVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE+R+PSIRKSSV+EGLTV+GIL+NWSKIKPVIME+W+ENRDAL++LFG
Sbjct: 61 GYENLLLVRLLLEMRIPSIRKSSVAEGLTVDGILDNWSKIKPVIMEEWAENRDALIELFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRDEWMD DL TWIGANRFYPG+PDALKFASS IYIVTTKQSRFADALL+ELAG+ IPP
Sbjct: 121 KVRDEWMDNDLATWIGANRFYPGVPDALKFASSSIYIVTTKQSRFADALLQELAGLKIPP 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLGTGPKVEVLKQLQ+KPE QG+ LHFVEDRLATLKNVIK+PELDGWNLYLGDWGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQRKPEHQGLKLHFVEDRLATLKNVIKDPELDGWNLYLGDWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NT +ER EAASIPRI LLQL+DFS+KLK
Sbjct: 241 NTHQERGEAASIPRITLLQLTDFSKKLK 268
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500274|gb|AFK38203.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/268 (83%), Positives = 252/268 (94%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M +LYALDFDGV+CDSCGESSLSA+KAAKVRWPGLFDGV+S +DWIVDQMH +RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPGLFDGVNSATQDWIVDQMHAVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE R PSIRKSSV+EGLTV+GILE WSK+KPVIME+W ENRDAL+DLFG
Sbjct: 61 GYENLLLVRLLLETRAPSIRKSSVAEGLTVDGILEKWSKLKPVIMEEWGENRDALIDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRDEW++++ TWIGANR YPG+ DALKFASSR+YIVTTKQSRFADA+LRELAGVTIPP
Sbjct: 121 KVRDEWLEQNFATWIGANRIYPGVSDALKFASSRVYIVTTKQSRFADAILRELAGVTIPP 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLG+GPKVEVLKQLQKKPE QG TLHFVEDRLATLKNVIKEPELD WNLYLG+WGY
Sbjct: 181 ERIYGLGSGPKVEVLKQLQKKPEHQGPTLHFVEDRLATLKNVIKEPELDQWNLYLGNWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NT+KE+EEAA+I RIQ+L+LSDFS+KLK
Sbjct: 241 NTRKEKEEAAAISRIQVLELSDFSKKLK 268
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441454|ref|XP_004138497.1| PREDICTED: uncharacterized protein LOC101221288 [Cucumis sativus] gi|449529778|ref|XP_004171875.1| PREDICTED: uncharacterized LOC101221288 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/268 (86%), Positives = 251/268 (93%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFD V+S +E+WIVDQM+ +RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDEVESSLENWIVDQMYTVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE+R+PSIRKSSV+EGLTV GILENWSK+KPVIME+W ENRDAL+DLFG
Sbjct: 61 GYENLLLVRLLLEMRLPSIRKSSVAEGLTVHGILENWSKLKPVIMEEWGENRDALIDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRD+W+D+DL TWIGANRFYPG+ DALKFASSRIYIVTTKQ RFADALLRELAGVTIPP
Sbjct: 121 KVRDQWIDEDLATWIGANRFYPGVSDALKFASSRIYIVTTKQGRFADALLRELAGVTIPP 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLGTGPKVEVLK LQK PE QG+ LHFVEDRLATLKNVIKE ELDGWN+YL DWGY
Sbjct: 181 ERIYGLGTGPKVEVLKMLQKMPEHQGLKLHFVEDRLATLKNVIKESELDGWNIYLVDWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NTQKEREEAA+I RIQLLQLSDFS KLK
Sbjct: 241 NTQKEREEAAAIKRIQLLQLSDFSTKLK 268
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454274|ref|XP_002275801.1| PREDICTED: uncharacterized protein LOC100260183 [Vitis vinifera] gi|297745313|emb|CBI40393.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/268 (86%), Positives = 250/268 (93%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDG+LCDSCGESSLSAVKAAKVRWPGLFDGVDS +EDWIVDQM I+RPVVET
Sbjct: 1 MGDLYALDFDGILCDSCGESSLSAVKAAKVRWPGLFDGVDSKLEDWIVDQMFIIRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE+R+PSIRKSSV EGLT+EGILENWSK+KPVIME+W E R+ LVDLFG
Sbjct: 61 GYENLLLVRLLLEMRLPSIRKSSVVEGLTIEGILENWSKLKPVIMEEWDEKREPLVDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRDEWM+ DL TWI ANRFYPG+ DALKFASS++YIVTTKQ RFA+ALLRELAGVTIP
Sbjct: 121 KVRDEWMEDDLATWIDANRFYPGVADALKFASSKVYIVTTKQGRFAEALLRELAGVTIPS 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLGTGPKVEVLKQLQK+ E QG+TLHFVEDRLATLKNVIKEPELDGWNLYLG WGY
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKQSEHQGLTLHFVEDRLATLKNVIKEPELDGWNLYLGKWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NTQKEREEAA I RIQLL+LSDFS+KLK
Sbjct: 241 NTQKEREEAAGISRIQLLELSDFSKKLK 268
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507383|ref|XP_003623980.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|217073782|gb|ACJ85251.1| unknown [Medicago truncatula] gi|355498995|gb|AES80198.1| hypothetical protein MTR_7g077870 [Medicago truncatula] gi|388518891|gb|AFK47507.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/268 (82%), Positives = 250/268 (93%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M +LYALDFDGV+CDSCGESSLSA+KAAKVRWP LFDGVDS IEDWIVDQMH +RPVVET
Sbjct: 1 MGELYALDFDGVICDSCGESSLSALKAAKVRWPVLFDGVDSTIEDWIVDQMHTVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE R PSIRKSSV+EGL VEGILE+WS +KP+IME+W ENR+AL+DLFG
Sbjct: 61 GYENLLLVRLLLETRTPSIRKSSVAEGLAVEGILESWSTLKPIIMEEWGENREALIDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRDEW+++D WIGANR YPG+ DALKFASS+++IVTTKQSRFADALLRELAGVTIP
Sbjct: 121 KVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALLRELAGVTIPS 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLGTGPKVE+LKQLQK+PE QG+TLHFVEDRLATLKNVIKEPELD WNLYLG+WGY
Sbjct: 181 ERIYGLGTGPKVEILKQLQKRPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGNWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NT +E+EEAA+IPRI++LQLSDFS+KLK
Sbjct: 241 NTAQEKEEAAAIPRIRVLQLSDFSKKLK 268
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297824659|ref|XP_002880212.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] gi|297326051|gb|EFH56471.1| hypothetical protein ARALYDRAFT_904052 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/268 (83%), Positives = 251/268 (93%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE R+PSIRKSSV+EGLTV+GILE+W+KIKPVIME W E++DAL+DLFG
Sbjct: 61 GYENLLLVRLLLETRIPSIRKSSVAEGLTVDGILESWAKIKPVIMEAWDEDKDALIDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTKQ RFA+ALLRE+AGV IP
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLG+GPKVEVLK +Q KPE QG+TLHFVEDRLATLKNVIKEPELD WNLYLG+WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLIQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWNLYLGNWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NT+KER EAASIPRIQ+++LS FS KLK
Sbjct: 241 NTEKERAEAASIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18406942|ref|NP_566060.1| uncharacterized protein [Arabidopsis thaliana] gi|30690184|ref|NP_850443.1| uncharacterized protein [Arabidopsis thaliana] gi|3702346|gb|AAC62903.1| expressed protein [Arabidopsis thaliana] gi|15292713|gb|AAK92725.1| unknown protein [Arabidopsis thaliana] gi|20197209|gb|AAM14973.1| expressed protein [Arabidopsis thaliana] gi|21280859|gb|AAM45106.1| unknown protein [Arabidopsis thaliana] gi|222423162|dbj|BAH19560.1| AT2G45990 [Arabidopsis thaliana] gi|330255533|gb|AEC10627.1| uncharacterized protein [Arabidopsis thaliana] gi|330255534|gb|AEC10628.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/268 (82%), Positives = 248/268 (92%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E+RDALVDLFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTKQ RFA+ALLRE+AGV IP
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLG+GPKVEVLK LQ KPE QG+TLHFVEDRLATLKNVIKEPELD W+LYLG WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGTWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NT+KER EAA IPRIQ+++LS FS KLK
Sbjct: 241 NTEKERAEAAGIPRIQVIELSTFSNKLK 268
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147782417|emb|CAN70694.1| hypothetical protein VITISV_002394 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/275 (83%), Positives = 249/275 (90%), Gaps = 7/275 (2%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDG+LCDSCGESSLSAVKAAKVRWPGLFDGVDS +EDWIVDQM I+RPVVET
Sbjct: 1 MGDLYALDFDGILCDSCGESSLSAVKAAKVRWPGLFDGVDSKLEDWIVDQMFIIRPVVET 60
Query: 61 GYENLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYENLLLVRLLLE+R+PSIRKSSV EGLT+EGILENWSK+KPVIME+W E R+ LVDLFG
Sbjct: 61 GYENLLLVRLLLEMRLPSIRKSSVVEGLTIEGILENWSKLKPVIMEEWDEKREPLVDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRDEWM+ DL TWI ANRFYPG+ DALKFASS++YIVTTKQ RFA+ALLRELAGVTIP
Sbjct: 121 KVRDEWMEDDLATWIDANRFYPGVADALKFASSKVYIVTTKQGRFAEALLRELAGVTIPS 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTL-------HFVEDRLATLKNVIKEPELDGWNL 233
+RIYGLGTGPKVEVLKQLQK+ E QG+TL FVEDRLATLKNVIKEPELDGWNL
Sbjct: 181 ERIYGLGTGPKVEVLKQLQKQSEHQGLTLPLYPILSSFVEDRLATLKNVIKEPELDGWNL 240
Query: 234 YLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268
YLG WGYNTQKEREEAA I RIQLL+LSDFS+KLK
Sbjct: 241 YLGKWGYNTQKEREEAAGISRIQLLELSDFSKKLK 275
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 268 | ||||||
| TAIR|locus:2050730 | 268 | AT2G45990 "AT2G45990" [Arabido | 1.0 | 1.0 | 0.798 | 7.1e-116 |
| TAIR|locus:2050730 AT2G45990 "AT2G45990" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 214/268 (79%), Positives = 240/268 (89%)
Query: 1 MADLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFDGVDSVIEDWIVDQMHILRPVVET 60
M DLYALDFDGVLCDSCGESSLSAVKAAKVRWP LF+GVDS +E+WIVDQMHI+RPVVET
Sbjct: 1 MGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPDLFEGVDSALEEWIVDQMHIVRPVVET 60
Query: 61 GYENXXXXXXXXEIRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFG 120
GYEN E ++PSIRKSSV+EGLTV+GILE+W+K KPVIME W E+RDALVDLFG
Sbjct: 61 GYENLLLVRLLLETKIPSIRKSSVAEGLTVDGILESWAKFKPVIMEAWDEDRDALVDLFG 120
Query: 121 KVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP 180
KVRD+W++KDLTTWIGANRFYPG+ DALKFASS+IYIVTTKQ RFA+ALLRE+AGV IP
Sbjct: 121 KVRDDWINKDLTTWIGANRFYPGVSDALKFASSKIYIVTTKQGRFAEALLREIAGVIIPS 180
Query: 181 DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240
+RIYGLG+GPKVEVLK LQ KPE QG+TLHFVEDRLATLKNVIKEPELD W+LYLG WGY
Sbjct: 181 ERIYGLGSGPKVEVLKLLQDKPEHQGLTLHFVEDRLATLKNVIKEPELDKWSLYLGTWGY 240
Query: 241 NTQKEREEAASIPRIQLLQLSDFSRKLK 268
NT+KER EAA IPRIQ+++LS FS KLK
Sbjct: 241 NTEKERAEAAGIPRIQVIELSTFSNKLK 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 260 0.00089 114 3 11 22 0.49 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 619 (66 KB)
Total size of DFA: 205 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.00u 0.18s 22.18t Elapsed: 00:00:01
Total cpu time: 22.00u 0.18s 22.18t Elapsed: 00:00:01
Start: Fri May 10 05:45:19 2013 End: Fri May 10 05:45:20 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XIV1313 | hypothetical protein (269 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.00150423 | SubName- Full=Putative uncharacterized protein; (206 aa) | • | • | 0.529 | |||||||
| gw1.XIII.355.1 | hypothetical protein (158 aa) | • | • | 0.514 | |||||||
| eugene3.00130190 | SubName- Full=Putative uncharacterized protein; (339 aa) | • | • | 0.502 | |||||||
| gw1.I.8641.1 | annotation not avaliable (113 aa) | • | 0.501 | ||||||||
| grail3.0089000701 | hypothetical protein (311 aa) | • | 0.501 | ||||||||
| eugene3.00061626 | hypothetical protein (259 aa) | • | 0.500 | ||||||||
| estExt_Genewise1_v1.C_LG_II4195 | SubName- Full=Putative uncharacterized protein; (140 aa) | • | 0.500 | ||||||||
| gw1.XII.99.1 | hypothetical protein (203 aa) | • | 0.498 | ||||||||
| gw1.2719.1.1 | annotation not avaliable (154 aa) | • | 0.498 | ||||||||
| gw1.1884.1.1 | annotation not avaliable (196 aa) | • | 0.498 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 268 | |||
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.97 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.97 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.96 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.96 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.96 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.95 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.95 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.95 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.95 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.94 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.94 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.94 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.93 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.93 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.93 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.93 | |
| PLN02940 | 382 | riboflavin kinase | 99.92 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.92 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.92 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.91 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.91 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.91 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.9 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.9 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.9 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.9 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.89 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.89 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.89 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.87 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.87 | |
| PLN02811 | 220 | hydrolase | 99.86 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.85 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.85 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.84 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.84 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.83 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.83 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.82 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.8 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.8 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.8 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.79 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.77 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.77 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.76 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.75 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.75 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.75 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.74 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.73 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.72 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.68 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.68 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.68 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.67 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.65 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.63 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.62 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.61 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.61 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.61 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.6 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.58 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.56 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.55 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.55 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.53 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.53 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.53 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.51 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.51 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.51 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.51 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.48 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.47 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.41 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.41 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.4 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.33 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.33 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.3 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.29 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.29 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.28 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.28 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.27 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.24 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.19 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.16 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.11 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.09 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.08 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.06 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.03 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.01 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.0 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.99 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.97 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.93 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.86 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.85 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.84 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.82 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.82 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.76 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.7 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.68 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.61 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.58 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.55 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.54 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.52 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.52 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.51 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.45 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.43 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.38 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.35 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.27 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.23 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.18 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.17 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.17 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.13 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.13 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.08 | |
| PLN02887 | 580 | hydrolase family protein | 98.06 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.05 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.02 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.01 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.0 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.89 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.87 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.84 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.77 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.68 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.62 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 97.59 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.58 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.55 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.48 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.47 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.45 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.43 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.43 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 97.41 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.34 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 97.26 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.26 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.23 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 97.23 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.11 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.11 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.08 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.92 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.9 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.9 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.84 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 96.74 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 96.72 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.65 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 96.48 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.43 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 96.42 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 96.36 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.33 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 96.31 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.25 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.13 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 96.1 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 96.1 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 96.08 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.06 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 96.03 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 95.98 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 95.97 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 95.97 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.74 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.73 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 95.71 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 95.71 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.69 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.67 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.65 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 95.6 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 95.49 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 95.48 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 95.43 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.21 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 95.15 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.14 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.0 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 94.89 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 94.87 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.78 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 94.77 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.43 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 94.41 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 94.39 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 94.36 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 94.21 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 94.03 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 93.88 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 93.78 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 93.55 | |
| PLN02423 | 245 | phosphomannomutase | 93.1 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.1 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 93.03 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 92.92 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 92.65 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 91.68 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 90.9 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 90.85 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 90.56 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 90.18 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 90.11 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 89.57 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 89.34 | |
| PLN02580 | 384 | trehalose-phosphatase | 89.29 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 88.99 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 88.28 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 88.11 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 88.07 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 87.73 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 87.67 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 87.65 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 87.26 | |
| COG2022 | 262 | ThiG Uncharacterized enzyme of thiazole biosynthes | 86.83 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 86.12 | |
| PF05690 | 247 | ThiG: Thiazole biosynthesis protein ThiG; InterPro | 85.18 | |
| PLN02423 | 245 | phosphomannomutase | 84.68 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 84.55 | |
| COG0731 | 296 | Fe-S oxidoreductases [Energy production and conver | 84.15 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 84.09 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 83.95 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 81.61 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 81.57 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 81.23 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 80.83 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 80.37 |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=219.07 Aligned_cols=124 Identities=28% Similarity=0.355 Sum_probs=112.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++|+||+++..++..+++ +|+..+|+.+++.+. ||+|..+..++.+++..|+++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~ 165 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEA 165 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhhe
Confidence 468999999999 799999999999999999999999 899999999999543 589999999999999998999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+||||+..|+++ |++||+.+|+|.|||+..+.+.. ..||+++.++.||...|
T Consensus 166 l~VGDs~~Di~a----A~~Ag~~~v~v~~g~~~~~~l~~--~~~d~vi~~~~el~~~l 217 (220)
T COG0546 166 LMVGDSLNDILA----AKAAGVPAVGVTWGYNSREELAQ--AGADVVIDSLAELLALL 217 (220)
T ss_pred EEECCCHHHHHH----HHHcCCCEEEEECCCCCCcchhh--cCCCEEECCHHHHHHHH
Confidence 999999999999 99999999999999875555555 56899999999998765
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=214.86 Aligned_cols=125 Identities=17% Similarity=0.156 Sum_probs=110.9
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||++...+...++. +|+..+|+.+++++. ||+|+++.++.++++++|++
T Consensus 92 ~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~ 170 (229)
T PRK13226 92 TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTD 170 (229)
T ss_pred hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhh
Confidence 4567999999999 689999999999999999999999 899999999988764 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCH-HHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ-KEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~-~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|+||||+.+|+++ |+++|+.+|++.||+... ..+.. ..|++.++++.+|.++|
T Consensus 171 ~l~IGDs~~Di~a----A~~aG~~~i~v~~g~~~~~~~~~~--~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 171 CVYVGDDERDILA----ARAAGMPSVAALWGYRLHDDDPLA--WQADVLVEQPQLLWNPA 224 (229)
T ss_pred EEEeCCCHHHHHH----HHHCCCcEEEEeecCCCCCcChhh--cCCCeeeCCHHHHHHHh
Confidence 9999999999999 999999999999998533 23333 46999999999998876
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=210.81 Aligned_cols=125 Identities=18% Similarity=0.121 Sum_probs=113.7
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||+....+...++. +|+..+|+.+++++. +|+|+++.++..+++.+|++
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 157 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEE 157 (214)
T ss_pred hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHH
Confidence 4467999999999 588999999999999999999999 899999999999864 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++||||+.+|+++ |+++|+.+|++.||+....++.+ ..|++.+.++.++.+++
T Consensus 158 ~~~iGDs~~Di~a----a~~aG~~~i~v~~g~~~~~~l~~--~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 158 ALMVGDNHHDILA----GKNAGTKTAGVAWTIKGREYLEQ--YKPDFMLDKMSDLLAIV 210 (214)
T ss_pred EEEECCCHHHHHH----HHHCCCeEEEEcCCCCCHHHHhh--cCcCEEECCHHHHHHHH
Confidence 9999999999999 99999999999999877666655 46889999999998875
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=211.31 Aligned_cols=126 Identities=11% Similarity=-0.003 Sum_probs=111.2
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC-CeEEecCC----CChHHHHHHHHhcCCCC-
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLGT----GPKVEVLKQLQKKPELQ- 205 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f-~~i~~~~~----~pk~~~~~~~~~~~~~~- 205 (268)
....+++||+.++| +++|++++|+||++...++..++. +|+..+| +.|++++. ||+|+++..+.++++..
T Consensus 95 ~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 95 AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 34568999999999 688999999999999999999999 7998885 88988864 59999999999999995
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCC-----------------------HHHHHhhcCCCCEEEcCHhH
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT-----------------------QKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~-----------------------~~~~~~~~~~p~~~~~~~~~ 262 (268)
|++|+|||||.+|+++ |+++|+.+|+|.||++. .+++.. ..||+++.++.+
T Consensus 174 ~~~~l~IGDs~~Di~a----A~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~e 247 (253)
T TIGR01422 174 VAACVKVGDTVPDIEE----GRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKA--AGAHYVIDTLAE 247 (253)
T ss_pred chheEEECCcHHHHHH----HHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHh--cCCCEehhcHHH
Confidence 9999999999999999 99999999999999862 235554 578999999999
Q ss_pred HHhhc
Q 024415 263 FSRKL 267 (268)
Q Consensus 263 l~~~l 267 (268)
|..+|
T Consensus 248 l~~~~ 252 (253)
T TIGR01422 248 LPAVI 252 (253)
T ss_pred HHHhh
Confidence 98765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-29 Score=208.83 Aligned_cols=121 Identities=11% Similarity=-0.008 Sum_probs=108.9
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||++...++..+++ +|+..+|+.+++++. ||+|+++.++.++++++|++
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 183 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH 183 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence 4567999999999 689999999999999999999999 899999999999875 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
|+||||+..|+++ |+++|+.+|++.||+ ..+.+.. ..|++++.++.|+.
T Consensus 184 ~l~vgDs~~Di~a----A~~aGi~~i~v~~g~-~~~~l~~--~~a~~vi~~~~e~~ 232 (248)
T PLN02770 184 TFVFEDSVSGIKA----GVAAGMPVVGLTTRN-PESLLME--AKPTFLIKDYEDPK 232 (248)
T ss_pred EEEEcCCHHHHHH----HHHCCCEEEEEeCCC-CHHHHhh--cCCCEEeccchhhH
Confidence 9999999999999 999999999999985 5545554 56899999999843
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=208.26 Aligned_cols=126 Identities=11% Similarity=0.023 Sum_probs=109.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCC-CCeEEecCC----CChHHHHHHHHhcCCCC-
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP-PDRIYGLGT----GPKVEVLKQLQKKPELQ- 205 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~-f~~i~~~~~----~pk~~~~~~~~~~~~~~- 205 (268)
.....++||+.++| +++|++++|+||+....+...++. +++..+ |+.|++++. ||+|+++..+.+++++.
T Consensus 97 ~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 97 ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYD 175 (267)
T ss_pred hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCC
Confidence 34568999999999 688999999999999999999998 788776 488888864 49999999999999996
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCC-----------------------HHHHHhhcCCCCEEEcCHhH
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT-----------------------QKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~-----------------------~~~~~~~~~~p~~~~~~~~~ 262 (268)
|++|+||||+++|+++ |+++|+.+|+|.||++. .+.+.. ..|++++.++.+
T Consensus 176 ~~e~l~IGDs~~Di~a----A~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~a~~vi~~~~~ 249 (267)
T PRK13478 176 VAACVKVDDTVPGIEE----GLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA--AGAHYVIDTIAD 249 (267)
T ss_pred CcceEEEcCcHHHHHH----HHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH--cCCCeehhhHHH
Confidence 6999999999999999 99999999999999863 234544 568899999999
Q ss_pred HHhhc
Q 024415 263 FSRKL 267 (268)
Q Consensus 263 l~~~l 267 (268)
|..+|
T Consensus 250 l~~~l 254 (267)
T PRK13478 250 LPAVI 254 (267)
T ss_pred HHHHH
Confidence 98765
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=204.45 Aligned_cols=125 Identities=18% Similarity=0.264 Sum_probs=112.8
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++|+||+....++..+++ +|+..+|+.+++++. ||+|+++.++.++++++|++
T Consensus 82 ~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 160 (213)
T TIGR01449 82 ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQ 160 (213)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhH
Confidence 3468999999999 688999999999999999999999 899999999998864 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++||||+.+|+++ |+++|+.+|++.||++..+.+.. ..|++++.++.+|..+|
T Consensus 161 ~~~igDs~~d~~a----a~~aG~~~i~v~~g~~~~~~l~~--~~a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 161 MVYVGDSRVDIQA----ARAAGCPSVLLTYGYRYGEAIDL--LPPDVLYDSLNELPPLL 213 (213)
T ss_pred eEEeCCCHHHHHH----HHHCCCeEEEEccCCCCCcchhh--cCCCeEeCCHHHHHhhC
Confidence 9999999999999 99999999999999876655654 46889999999998764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=202.88 Aligned_cols=125 Identities=16% Similarity=0.109 Sum_probs=113.1
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCC--CCCCeEEecCC----CChHHHHHHHHhcCCCC-C
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT--IPPDRIYGLGT----GPKVEVLKQLQKKPELQ-G 206 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~--~~f~~i~~~~~----~pk~~~~~~~~~~~~~~-~ 206 (268)
..+++||+.++| +++|++++|+||+....+...++. +|+. .+|+.+++++. ||+|+++..+..++++. |
T Consensus 85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred CCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 458999999999 688999999999999999999999 7998 99999999865 49999999999999997 7
Q ss_pred CcEEEEecCccchhcccccccccCCeE-EEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~-v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
++|+||||+..|+++ |+++|+.+ |++.+|+...+.+.+ ..|++++.++.+|..++.
T Consensus 164 ~~~~~igD~~~Di~a----a~~aG~~~~i~~~~g~~~~~~~~~--~~~~~~i~~~~~l~~~~~ 220 (220)
T TIGR03351 164 QSVAVAGDTPNDLEA----GINAGAGAVVGVLTGAHDAEELSR--HPHTHVLDSVADLPALLD 220 (220)
T ss_pred hHeEEeCCCHHHHHH----HHHCCCCeEEEEecCCCcHHHHhh--cCCceeecCHHHHHHhhC
Confidence 999999999999999 99999999 999999877777765 468899999999988763
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=205.81 Aligned_cols=126 Identities=20% Similarity=0.271 Sum_probs=114.2
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEE
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l 210 (268)
....+++||+.++| +++|++++|+||+....+...++. +|+..+|+.+++++.. +|++++..++++.++.|++|+
T Consensus 138 ~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l 216 (273)
T PRK13225 138 LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVM 216 (273)
T ss_pred cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEE
Confidence 34568999999999 688999999999999999999999 8999999998887664 889999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
||||+..|+++ |+++|+.+|++.||++...++.. ..|++.+.++.+|..++
T Consensus 217 ~IGDs~~Di~a----A~~AG~~~I~v~~g~~~~~~l~~--~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 217 YVGDETRDVEA----ARQVGLIAVAVTWGFNDRQSLVA--ACPDWLLETPSDLLQAV 267 (273)
T ss_pred EECCCHHHHHH----HHHCCCeEEEEecCCCCHHHHHH--CCCCEEECCHHHHHHHH
Confidence 99999999999 99999999999999988777765 57999999999998764
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=206.36 Aligned_cols=124 Identities=23% Similarity=0.277 Sum_probs=111.9
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +.+|++++|+||++...++..++. +|+..+|+.+++++. +|+|++++.+.++.++.|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 457899999999 588999999999999999999999 899999999998864 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+||||+.+|+++ |+++|+.+++|.+|++....+.+ ..|+++++++.+|..++
T Consensus 178 l~IGD~~~Di~a----A~~aGi~~i~v~~G~~~~~~l~~--~~~~~vi~~l~el~~~~ 229 (272)
T PRK13223 178 LFVGDSRSDVLA----AKAAGVQCVALSYGYNHGRPIAE--ESPALVIDDLRALLPGC 229 (272)
T ss_pred EEECCCHHHHHH----HHHCCCeEEEEecCCCCchhhhh--cCCCEEECCHHHHHHHH
Confidence 999999999999 99999999999999877666655 46899999999998754
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=198.23 Aligned_cols=126 Identities=19% Similarity=0.274 Sum_probs=114.7
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||+....+...++. +|+..+|+.+++++. ||+|+++..+.++++++|++
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 4568999999999 688999999999999999999999 899999999998864 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
++||||+..|+.+ |+++|+.+|++.||++..+++.+ ..|++++.++.+|..+++
T Consensus 151 ~l~igD~~~Di~a----A~~~Gi~~i~~~~g~~~~~~l~~--~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 151 AVMVGDAVTDLAS----ARAAGTATVAALWGEGDAGELLA--ARPDFLLRKPQSLLALCR 204 (205)
T ss_pred eEEEcCCHHHHHH----HHHcCCeEEEEEecCCChhhhhh--cCCCeeeCCHHHHHHHhh
Confidence 9999999999999 99999999999999988777765 468899999999988764
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-27 Score=198.81 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=107.2
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++|+||++...+...+++ +|+..+|+.+++++. ||+|+++..+.++++++|++|
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC 185 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence 457899999999 689999999999999999999999 899999999998864 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
+|||||..|+++ |+++|+.+|++. |+.....+. .|++++.++++|...
T Consensus 186 l~IgDs~~Di~a----A~~aG~~~i~v~-g~~~~~~l~----~ad~vi~~~~el~~~ 233 (260)
T PLN03243 186 IVFGNSNSSVEA----AHDGCMKCVAVA-GKHPVYELS----AGDLVVRRLDDLSVV 233 (260)
T ss_pred EEEcCCHHHHHH----HHHcCCEEEEEe-cCCchhhhc----cCCEEeCCHHHHHHH
Confidence 999999999999 999999999986 665554443 488999999998654
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=197.15 Aligned_cols=118 Identities=18% Similarity=0.091 Sum_probs=101.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||+....+...++. .|+ .+|+.+++++. ||+|+++..+.++.++.|++
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~ 157 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE 157 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc
Confidence 4567999999999 689999999999998888888888 788 45788887753 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
|+|||||..|+++ |+++|+.+|++.++... ... ..|++.+.++.+|.
T Consensus 158 ~l~igDs~~di~a----A~~aG~~~i~v~~~~~~-~~~----~~~~~~~~~~~el~ 204 (218)
T PRK11587 158 CVVVEDAPAGVLS----GLAAGCHVIAVNAPADT-PRL----DEVDLVLHSLEQLT 204 (218)
T ss_pred EEEEecchhhhHH----HHHCCCEEEEECCCCch-hhh----ccCCEEecchhhee
Confidence 9999999999999 99999999999887532 222 35889999999874
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-27 Score=195.19 Aligned_cols=125 Identities=24% Similarity=0.326 Sum_probs=111.8
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++++||+....+...++. +|+..+|+.+++++. +|+|++++.+.++++.+|++
T Consensus 90 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 168 (226)
T PRK13222 90 GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEE 168 (226)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhh
Confidence 3567999999999 688999999999999999999999 899999999998764 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+++|||+.+|+.+ |+++|+.+|++.||+++..+... ..|++++.++.+|...|
T Consensus 169 ~i~igD~~~Di~~----a~~~g~~~i~v~~g~~~~~~~~~--~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 169 MLFVGDSRNDIQA----ARAAGCPSVGVTYGYNYGEPIAL--SEPDVVIDHFAELLPLL 221 (226)
T ss_pred eEEECCCHHHHHH----HHHCCCcEEEECcCCCCccchhh--cCCCEEECCHHHHHHHH
Confidence 9999999999999 99999999999999875555543 46889999999998765
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=201.46 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=106.5
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++|+||+++..++..+++ +|+..+|+.|++++. ||+|+++..+..++++.|++
T Consensus 213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pee 291 (381)
T PLN02575 213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPER 291 (381)
T ss_pred cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCccc
Confidence 3467999999999 689999999999999999999999 899999999999875 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
|+||||+..|+++ |+++|+.+|++.+++ ...++ ..+++++.++.||.
T Consensus 292 cl~IGDS~~DIeA----Ak~AGm~~IgV~~~~-~~~~l----~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 292 CIVFGNSNQTVEA----AHDARMKCVAVASKH-PIYEL----GAADLVVRRLDELS 338 (381)
T ss_pred EEEEcCCHHHHHH----HHHcCCEEEEECCCC-ChhHh----cCCCEEECCHHHHH
Confidence 9999999999999 999999999998764 33333 24789999999984
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-27 Score=194.39 Aligned_cols=122 Identities=15% Similarity=0.158 Sum_probs=107.7
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||+....++..++. +|+..+|+.+++++. +|+|+++..++.++++.|++
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLT 167 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 4568999999999 689999999999999999999999 899999999998864 49999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHh
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 265 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~ 265 (268)
|+||||+.+|+++ |+++|+.+|++.++....+. .. ..+++++.++.||..
T Consensus 168 ~~~igDs~~Di~a----A~~aG~~~i~v~~~~~~~~~-~~--~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 168 CVALEDSFNGMIA----AKAARMRSIVVPAPEQQNDP-RW--ALADVKLESLTELTA 217 (222)
T ss_pred eEEEcCChhhHHH----HHHcCCEEEEecCCccCchh-hh--hhhheeccCHHHHhh
Confidence 9999999999999 99999999999988644322 22 247899999999864
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=185.05 Aligned_cols=122 Identities=20% Similarity=0.233 Sum_probs=105.6
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||++...+...+++ +|+..+|+.+++++. ||+|+++..+.++++++|++
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 3457999999999 688999999999999999999999 899999999988764 49999999999999999999
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
++||||+. +|+.+ |+++|+.+|++.+++....+.. ....|++.+.++.+|
T Consensus 170 ~~~igDs~~~di~~----A~~aG~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~el 220 (221)
T TIGR02253 170 AVMVGDRLDKDIKG----AKNLGMKTVWINQGKSSKMEDD-VYPYPDYEISSLREL 220 (221)
T ss_pred EEEECCChHHHHHH----HHHCCCEEEEECCCCCcccccc-cccCCCeeeCcHHhh
Confidence 99999998 89999 9999999999998865332222 124688999999886
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=188.56 Aligned_cols=124 Identities=16% Similarity=0.123 Sum_probs=104.8
Q ss_pred ccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCC-CCc
Q 024415 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQ-GMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~-~~~ 208 (268)
...+++||+.++|+ ++|++++|+||+....++..++. +|+..+|+.+++++. ||+|+++..+.++++.. +++
T Consensus 92 ~~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 92 EICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR 170 (224)
T ss_pred hcCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence 34678999999992 36899999999999999999999 899999999998864 59999999999999975 489
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
|+||||+. +|+++ |+++|+.+|++.++... .... ..|++.+.++.+|..+|+
T Consensus 171 ~~~vgD~~~~Di~~----A~~aG~~~i~~~~~~~~--~~~~--~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 171 VLMVGDNLHSDILG----GINAGIDTCWLNAHGRE--QPEG--IAPTYQVSSLSELEQLLC 223 (224)
T ss_pred EEEEcCCcHHHHHH----HHHCCCcEEEECCCCCC--CCCC--CCCeEEECCHHHHHHHHh
Confidence 99999998 69999 99999999999854221 1111 358999999999988774
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-26 Score=207.58 Aligned_cols=121 Identities=17% Similarity=0.258 Sum_probs=106.6
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC---CChHHHHHHHHhcCCCCCCcE
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT---GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~---~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...+++||+.++| +++|++++|+||++...+...++. +|+..+|+.+++++. +|||+++..+.+++ .|++|
T Consensus 327 ~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~ 403 (459)
T PRK06698 327 GKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEA 403 (459)
T ss_pred cCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceE
Confidence 3468999999999 689999999999999999999999 899999999999875 48999998888765 46899
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++|||+..|+.+ |+++|+.+|++.|++...+++ ..|++.+.++.+|.+++
T Consensus 404 v~VGDs~~Di~a----Ak~AG~~~I~v~~~~~~~~~~----~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 404 AVVGDRLSDINA----AKDNGLIAIGCNFDFAQEDEL----AQADIVIDDLLELKGIL 453 (459)
T ss_pred EEEeCCHHHHHH----HHHCCCeEEEEeCCCCccccc----CCCCEEeCCHHHHHHHH
Confidence 999999999999 999999999999987654443 25899999999998875
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=182.49 Aligned_cols=153 Identities=11% Similarity=0.051 Sum_probs=112.2
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 100 IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
....++..+|.+.+............+. .|.....++||+.++|+ +.+++++|+||++.. ++. +|+.
T Consensus 79 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~-~gl~ 147 (238)
T PRK10748 79 AIEQAMLDAGLSAEEASAGADAAMINFA-----KWRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PEL-FGLG 147 (238)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHH-----HHhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHH-CCcH
Confidence 3455667777755442222222222221 12344679999999992 345999999998764 477 7999
Q ss_pred CCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCC
Q 024415 178 IPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASI 252 (268)
Q Consensus 178 ~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~ 252 (268)
.+|+.|++++. ||+|+++..+.++.++.|++|+||||+ ..|+.+ |+++|+.++|+..+.............
T Consensus 148 ~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~----A~~aG~~~i~v~~~~~~~~~~~~~~~~ 223 (238)
T PRK10748 148 DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAG----AIRCGMQACWINPENGDLMQTWDSRLL 223 (238)
T ss_pred HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHH----HHHCCCeEEEEcCCCccccccccccCC
Confidence 99999998864 599999999999999999999999999 599999 999999999998764321111111146
Q ss_pred CCEEEcCHhHHHhhc
Q 024415 253 PRIQLLQLSDFSRKL 267 (268)
Q Consensus 253 p~~~~~~~~~l~~~l 267 (268)
|++++.++.||.++|
T Consensus 224 p~~~i~~l~el~~~~ 238 (238)
T PRK10748 224 PHIEISRLASLTSLI 238 (238)
T ss_pred CCEEECCHHHHHhhC
Confidence 999999999999875
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-25 Score=182.99 Aligned_cols=121 Identities=19% Similarity=0.280 Sum_probs=106.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcC-CCCCCc
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKP-ELQGMT 208 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~-~~~~~~ 208 (268)
..+++||+.++| +++ ++++|+||+....++..++. +|+..+|+.+++++. ||+|+++..+.++. +++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 457999999999 566 99999999999999999999 899999999998864 59999999999999 999999
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++||||+. .|+++ |+++|+++|+++++..+. ... ..|++++.++.||..+|
T Consensus 173 ~v~igD~~~~di~~----A~~~G~~~i~~~~~~~~~--~~~--~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 173 VLMIGDSLTADIKG----GQNAGLDTCWMNPDMHPN--PDD--IIPTYEIRSLEELYEIL 224 (224)
T ss_pred eEEECCCcHHHHHH----HHHCCCcEEEECCCCCCC--CCC--CCCceEECCHHHHHhhC
Confidence 99999998 79999 999999999999875442 122 46889999999998765
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-26 Score=186.87 Aligned_cols=123 Identities=9% Similarity=0.039 Sum_probs=102.1
Q ss_pred ccCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC-eEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 136 GANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPD-RIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 136 ~~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~-~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
....++||+.++|+..+++++|+||++...+...++. +|+..+|+ .+++++. ||+|+++..+.+++++.|++|+
T Consensus 85 ~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 85 SELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred ccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 4578999999999877899999999999999999999 89999996 6777642 5999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
||||+..|+++ |+++|+++|++.++.... .+.. .++.++.++.+|..++
T Consensus 164 ~igDs~~di~a----A~~aG~~~i~~~~~~~~~-~~~~---~~~~~~~~~~~l~~~~ 212 (221)
T PRK10563 164 LVDDSSAGAQS----GIAAGMEVFYFCADPHNK-PIDH---PLVTTFTDLAQLPELW 212 (221)
T ss_pred EEeCcHhhHHH----HHHCCCEEEEECCCCCCc-chhh---hhhHHHHHHHHHHHHH
Confidence 99999999999 999999999997654332 2221 2345578888877653
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-25 Score=198.00 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=105.9
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHH-HhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLR-ELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~-~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
....++||+.++| +++|++++|+||+++..+...++ . +|+..+|+.|++++. ||+|+++..++++++++|+
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~-~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCH-QGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-cChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 3467899999999 68999999999999999988887 6 799999999999875 5999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
+|+||||+..|+++ |+++|+.+|++.|++.... .. ..|++.+.++.+|.
T Consensus 169 ~~l~VGDs~~Di~a----A~~aGi~~I~v~~g~~~~~--~~--~~ad~~i~sl~el~ 217 (382)
T PLN02940 169 NCLVIEDSLPGVMA----GKAAGMEVIAVPSIPKQTH--LY--SSADEVINSLLDLQ 217 (382)
T ss_pred HEEEEeCCHHHHHH----HHHcCCEEEEECCCCcchh--hc--cCccEEeCCHhHcC
Confidence 99999999999999 9999999999999864332 22 46889999999875
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-25 Score=182.94 Aligned_cols=126 Identities=17% Similarity=0.174 Sum_probs=105.9
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
....++.||+.++| +++|++++++||+++..++..+.. +|+.++|+.++++++ ||+|+++....+++|+.|+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 45678999999999 688899999999999999999999 899999999988764 5999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCH--HHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ--KEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~--~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+||.|+||.+++++ |++|||.+|++..++... ..+.. ...+....++.++..++
T Consensus 161 ~CvviEDs~~Gi~A----a~aAGm~vv~v~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~ 216 (221)
T COG0637 161 ECVVVEDSPAGIQA----AKAAGMRVVGVPAGHDRPHLDPLDA--HGADTVLLDLAELPALL 216 (221)
T ss_pred HeEEEecchhHHHH----HHHCCCEEEEecCCCCccccchhhh--hhcchhhccHHHHHHHH
Confidence 99999999999999 999999999998754421 22222 23456677777776543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=176.95 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=92.0
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++|+||+++..+...++. +|+..+|+.+++++. ||+|+++..++++++++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 4468999999999 688999999999999999999999 899999999998764 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCe-EEEeecCCCC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWN-LYLGDWGYNT 242 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~-~v~v~~g~~~ 242 (268)
|+||||+..|+++ |+++||. +++|.++...
T Consensus 169 ~l~igDs~~di~a----A~~aG~~~~~~v~~~~~~ 199 (224)
T PRK14988 169 TLFIDDSEPILDA----AAQFGIRYCLGVTNPDSG 199 (224)
T ss_pred EEEEcCCHHHHHH----HHHcCCeEEEEEeCCCCC
Confidence 9999999999999 9999997 5678777543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-23 Score=169.67 Aligned_cols=98 Identities=17% Similarity=0.196 Sum_probs=91.3
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++|+||++...+...++. +|+..+|+.+++++. ||+|++++.+..+.++.|+++
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~ 168 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEV 168 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence 457899999999 688999999999999999999999 899999999998864 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecC
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
+||||+..|+.+ |+++|+.+|+++++
T Consensus 169 ~~vgD~~~Di~~----A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 169 LFVASNPWDLGG----AKKFGFKTAWVNRP 194 (198)
T ss_pred EEEeCCHHHHHH----HHHCCCcEEEecCC
Confidence 999999999999 99999999999875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-23 Score=177.13 Aligned_cols=117 Identities=13% Similarity=0.129 Sum_probs=98.8
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCC---CCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT---IPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~---~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
.+++||+.++| +++|++++|+||++...+...++. .+.. .+|+.+ +++. ||+|+++..+..+++++|+
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~ 220 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPS 220 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChH
Confidence 57999999999 688999999999999999999887 4332 334444 4442 5999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
+|+||||+..|+++ |+++|+.+|++.+|++..+.+ ..|++.+.++.++.
T Consensus 221 ~~l~IGDs~~Di~a----A~~aG~~~i~v~~g~~~~~~l----~~ad~vi~~~~~l~ 269 (286)
T PLN02779 221 RCVVVEDSVIGLQA----AKAAGMRCIVTKSSYTADEDF----SGADAVFDCLGDVP 269 (286)
T ss_pred HEEEEeCCHHhHHH----HHHcCCEEEEEccCCcccccc----CCCcEEECChhhcc
Confidence 99999999999999 999999999999998765554 25889999998864
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-24 Score=174.03 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=93.3
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC----CCCeEEecCC-CChHHHHHHHHhcCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI----PPDRIYGLGT-GPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~----~f~~i~~~~~-~pk~~~~~~~~~~~~~~~ 206 (268)
....+++||+.++| ++. ++++++||++.......++. +++.. +|+.+++++. +|||+++..+.++++ |
T Consensus 70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~ 145 (197)
T PHA02597 70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--D 145 (197)
T ss_pred HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--C
Confidence 44567999999999 454 57888899877666666666 67654 4567777665 599999999999998 8
Q ss_pred CcEEEEecCccchhccccccccc--CCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHh
Q 024415 207 MTLHFVEDRLATLKNVIKEPELD--GWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 265 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~a--G~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~ 265 (268)
++++||||+..|+++ |+++ ||.+|+++||+. .....|++.++|+.|+.+
T Consensus 146 ~~~v~vgDs~~di~a----A~~a~~Gi~~i~~~~~~~------~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 146 RVVCFVDDLAHNLDA----AHEALSQLPVIHMLRGER------DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred CcEEEeCCCHHHHHH----HHHHHcCCcEEEecchhh------ccccchhhhhccHHHHhc
Confidence 889999999999999 9999 999999999853 222356789999998864
|
2 hypothetical protein; Provisional |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-24 Score=169.88 Aligned_cols=93 Identities=20% Similarity=0.172 Sum_probs=85.0
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++++||+ ..++..++. +|+..+|+.+++++. +|+|++++++.++++.+|+++
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 162 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNEC 162 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 468999999999 6889999999998 567889999 899999999998864 489999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEe
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLG 236 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v 236 (268)
+||||+..|+++ |+++|+.+|+|
T Consensus 163 v~IgD~~~di~a----A~~~G~~~i~v 185 (185)
T TIGR02009 163 VVFEDALAGVQA----ARAAGMFAVAV 185 (185)
T ss_pred EEEeCcHhhHHH----HHHCCCeEeeC
Confidence 999999999999 99999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-23 Score=170.65 Aligned_cols=123 Identities=19% Similarity=0.184 Sum_probs=106.0
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++|++.++| +++ ++++++||+....+...++. +|+.++||.|+.++. ||+|+++++++++.++.|+++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 468999999999 344 88999999999999999999 899999999998875 599999999999999999999
Q ss_pred EEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 210 l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+||||+. +|+.+ |+++||.+||+..+.... ......|++.+.++.++.++++
T Consensus 175 l~VgD~~~~di~g----A~~~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 175 LFVGDSLENDILG----ARALGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EEECCChhhhhHH----HHhcCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHHh
Confidence 9999996 67799 999999999998774332 2222469999999999988763
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.6e-24 Score=170.52 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=84.1
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...++||+.++| +++|++++|+||+.. ....++. +|+..+|+.+++++. +|+|++++.++++.++.|+++
T Consensus 85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSEC 161 (185)
T ss_pred CcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 347899999999 688999999998753 4568899 899999999998764 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEee
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
+||||+..|+++ |+++|+.+|+|.
T Consensus 162 v~vgD~~~di~a----A~~aG~~~i~v~ 185 (185)
T TIGR01990 162 IGIEDAQAGIEA----IKAAGMFAVGVG 185 (185)
T ss_pred EEEecCHHHHHH----HHHcCCEEEecC
Confidence 999999999999 999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-24 Score=170.51 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=85.3
Q ss_pred ccCCCCCChHHHH-H-cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 136 GANRFYPGIPDAL-K-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 136 ~~~~~~pg~~e~L-~-~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...+++|| .++| . +.+++++|+||++...++..+++ +|+..+|+.|++++. ||+|+++.++.++++..|++|
T Consensus 85 ~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred ccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 34567886 4777 2 34589999999999999999999 899999999999864 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEee
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
+||||+..|+++ |+++|+.+|++.
T Consensus 163 l~igDs~~di~a----A~~aG~~~i~~~ 186 (188)
T PRK10725 163 VVFEDADFGIQA----ARAAGMDAVDVR 186 (188)
T ss_pred EEEeccHhhHHH----HHHCCCEEEeec
Confidence 999999999999 999999999874
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-23 Score=169.84 Aligned_cols=92 Identities=16% Similarity=0.240 Sum_probs=83.0
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
..++||+.++| +++|++++|+||++.. ....++. +|+..+|+.|++++. ||+|+++.+++++++++|++++
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 47899999999 6789999999998875 4778898 799999999998764 5999999999999999999999
Q ss_pred EEecCc-cchhcccccccccCCeEEE
Q 024415 211 FVEDRL-ATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 211 ~IGDs~-~Di~~~~~~A~~aG~~~v~ 235 (268)
||||+. .|+++ |+++|+.+||
T Consensus 182 ~IgD~~~~Di~~----A~~aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQG----ARAAGWRALL 203 (203)
T ss_pred EECCCchHHHHH----HHHcCCeeeC
Confidence 999997 89999 9999999875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.4e-23 Score=201.57 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=106.5
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCC-CCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT-IPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~-~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
.++||+.++| +++|++++|+||+....++..+++ +|+. .+|+.+++++. ||+|+++..+.+++++.|++|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 4799999999 689999999999999999999999 8996 78999999874 5999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
||||+..|+++ |+++||.+|++.+++ ..+++.. ..|++.+.++.++
T Consensus 240 ~IgDs~~Di~A----A~~aGm~~I~v~~~~-~~~~L~~--~~a~~vi~~l~el 285 (1057)
T PLN02919 240 VIEDALAGVQA----ARAAGMRCIAVTTTL-SEEILKD--AGPSLIRKDIGNI 285 (1057)
T ss_pred EEcCCHHHHHH----HHHcCCEEEEECCCC-CHHHHhh--CCCCEEECChHHC
Confidence 99999999999 999999999999986 5566665 5688999999985
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=163.06 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=86.6
Q ss_pred cCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------CChHHHHHHHHhcCCCCCCc
Q 024415 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 137 ~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------~pk~~~~~~~~~~~~~~~~~ 208 (268)
..+++||+.++|+...++++|+||++...+...++. +|+..+|+.|++++. ||+|+++..+.++.+..|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 456899999999655579999999999999999999 899999999998752 68999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEe
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLG 236 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v 236 (268)
++||||+..|+++ |+++|+.+|+|
T Consensus 161 ~l~vgD~~~di~a----A~~~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAA----AKALGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHH----HHHcCCEEeeC
Confidence 9999999999999 99999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=155.44 Aligned_cols=97 Identities=18% Similarity=0.216 Sum_probs=89.9
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
....+++||+.++| +++|++++++||++...+...++. +|+..+|+.+++++. ||++++++.+.++++++|+
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~ 151 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPE 151 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGG
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcc
Confidence 35668999999999 579999999999999999999999 799999999998863 4899999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEe
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v 236 (268)
+++||||+..|+++ |+++||.+|+|
T Consensus 152 ~~~~vgD~~~d~~~----A~~~G~~~i~v 176 (176)
T PF13419_consen 152 EILFVGDSPSDVEA----AKEAGIKTIWV 176 (176)
T ss_dssp GEEEEESSHHHHHH----HHHTTSEEEEE
T ss_pred eEEEEeCCHHHHHH----HHHcCCeEEeC
Confidence 99999999999999 99999999986
|
... |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-23 Score=168.26 Aligned_cols=107 Identities=12% Similarity=0.078 Sum_probs=88.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHH--HHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRF--ADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~--~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~ 206 (268)
...+++||+.++| +++|++++|+||+.... ....+.. .++..+|+.+++++. ||+|+++..++.+.+++|
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~ 169 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAP 169 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCH
Confidence 3467899999999 68899999999986543 3333445 578889999988753 699999999999999999
Q ss_pred CcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHH
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 247 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~ 247 (268)
++|+||||+..|+.+ |+++|+.+|++.++.....++.
T Consensus 170 ~~~l~i~D~~~di~a----A~~aG~~~i~v~~~~~~~~~l~ 206 (211)
T TIGR02247 170 EECVFLDDLGSNLKP----AAALGITTIKVSDEEQAIHDLE 206 (211)
T ss_pred HHeEEEcCCHHHHHH----HHHcCCEEEEECCHHHHHHHHH
Confidence 999999999999999 9999999999987644444443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.4e-22 Score=164.82 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=99.8
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC--C----CChHHHHHHHHhcCC---C
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--T----GPKVEVLKQLQKKPE---L 204 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~--~----~pk~~~~~~~~~~~~---~ 204 (268)
..+++||+.++| +++|++++|+||+........+....++..+|+.+++++ . ||+|+++..+.++++ +
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 457899999999 689999999999987655543333147788999999888 3 599999999999886 9
Q ss_pred CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 205 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 205 ~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
+|++|+||||+..|+++ |+++|+.+|++.+++.....+ ..|++++.++.++.
T Consensus 156 ~~~~~v~IgDs~~di~a----A~~aG~~~i~v~~~~~~~~~~----~~~d~vi~~~~e~~ 207 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEA----AKNAGMSVVMVPDPRLDKSYC----KGADQVLSSLLDFK 207 (220)
T ss_pred CccceEEEeccHhhHHH----HHHCCCeEEEEeCCCCcHhhh----hchhhHhcCHhhCC
Confidence 99999999999999999 999999999999987554333 25888999998764
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=153.80 Aligned_cols=105 Identities=11% Similarity=0.150 Sum_probs=90.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEE
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
+++||+.++| +++|++++|+||++.......+....++..+|+.+++++. ||+|++++.+.++.+++|++|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 5899999999 6899999999999988777666552478889999998864 59999999999999999999999
Q ss_pred EecCccchhcccccccccCCeEEEeecCCCCHHHHH
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 247 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~ 247 (268)
|||+..|+.+ |+++|+.++++.++....+.++
T Consensus 164 vgD~~~di~a----A~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 164 FDDNADNIEA----ANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred eCCCHHHHHH----HHHcCCEEEEecCCccHHHHHH
Confidence 9999999999 9999999999988755444443
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=150.73 Aligned_cols=93 Identities=20% Similarity=0.249 Sum_probs=84.6
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
.+++||+.++| +++|++++|+||++... ...+.+ +|+..+|+.+++++. ||+|++++.+.++.+++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 68999999999 58899999999999988 777777 799999999988653 5999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEe
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLG 236 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v 236 (268)
||||+..|+.+ |+++|+.+|+|
T Consensus 162 ~vgD~~~di~a----A~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEA----AKAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHH----HHHcCCEEEeC
Confidence 99999999999 99999999875
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-19 Score=149.11 Aligned_cols=121 Identities=20% Similarity=0.355 Sum_probs=93.3
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCC--CCCCe---------EEecC-------CCChHHHHH
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT--IPPDR---------IYGLG-------TGPKVEVLK 196 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~--~~f~~---------i~~~~-------~~pk~~~~~ 196 (268)
.+++||+.++| +++|++++|+|++....++..++. +|+. .+|+. +.+.+ .+|||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 46899999999 689999999999999999999999 7996 34532 11111 137999999
Q ss_pred HHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 197 QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 197 ~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
.+..+.+. ++++||||+.+|+.+ |+++|+.++.. +|......... ..|++.+.++.+|.+++.
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~a----a~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~~~~el~~~~~ 224 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEA----RKPGGADLFIG-YGGVQVREAVA--AKADWFVTDFQDLIEVLD 224 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHh----hhcCCCCEEEe-cCCCccCHHHH--hcCCEEECCHHHHHHhhC
Confidence 99888764 589999999999999 99999876644 44332223222 368899999999988763
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=149.64 Aligned_cols=118 Identities=15% Similarity=0.099 Sum_probs=93.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEE-------ec----CC---CChHHHHHHHH
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY-------GL----GT---GPKVEVLKQLQ 199 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~-------~~----~~---~pk~~~~~~~~ 199 (268)
..+++||+.++| +++|++++|+||+....+...++. +|+..+|+..+ ++ .. +|||.+++.+.
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 161 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILL 161 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHH
Confidence 356899999999 688999999999999999999999 79988875321 11 11 26999999999
Q ss_pred hcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhhc
Q 024415 200 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 267 (268)
Q Consensus 200 ~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~l 267 (268)
++.+++|++|+||||+.+|+.+ |+++|+..+ + ++...+.+ .+++.+. ++.++.++|
T Consensus 162 ~~~~~~~~~~i~iGDs~~Di~a----a~~ag~~i~-~----~~~~~~~~---~a~~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 162 RKEGISPENTVAVGDGANDLSM----IKAAGLGIA-F----NAKPKLQQ---KADICINKKDLTDILPLL 219 (219)
T ss_pred HHcCCCHHHEEEEECCHHHHHH----HHhCCCeEE-e----CCCHHHHH---hchhccCCCCHHHHHhhC
Confidence 9999999999999999999999 999999643 3 23344544 3567766 668877765
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-20 Score=147.02 Aligned_cols=119 Identities=24% Similarity=0.233 Sum_probs=96.2
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCH---------------HHHHHHHHHhcCCCCCCCeEEec-----C----CCCh
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL-----G----TGPK 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~---------------~~~~~~l~~~~gl~~~f~~i~~~-----~----~~pk 191 (268)
.++||+.++| +++|++++|+||++. ..+...++. +|+ .|+.++.+ + .||+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCCC
Confidence 3789999999 688999999999863 334456666 576 47776642 1 2599
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCC--CEEEcCHhHHHhhc
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIP--RIQLLQLSDFSRKL 267 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p--~~~~~~~~~l~~~l 267 (268)
|+++..+.++++..|++++||||+..|+.+ |+++|+.++++.+|+... .... ..| ++++.++.++.++|
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~----A~~aG~~~i~v~~g~~~~-~~~~--~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQA----AAAAGVTPVLVRTGKGVT-TLAE--GAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHH----HHHCCCeEEEEcCCCCch-hhhc--ccCCCceeecCHHHHHHHH
Confidence 999999999999999999999999999999 999999999999986533 3322 345 89999999998876
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.8e-21 Score=154.39 Aligned_cols=86 Identities=16% Similarity=0.089 Sum_probs=77.3
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC---CChHHHHHHHHhcCCCCCCcEEEE
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT---GPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~---~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
.+.++..++| +++|++++|+||+++..++..++. +|+..+|+.+++++. ||+|+++..+.++.++.|++|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 3455667777 688999999999999999999999 899999999998865 599999999999999999999999
Q ss_pred ecCccchhccccccccc
Q 024415 213 EDRLATLKNVIKEPELD 229 (268)
Q Consensus 213 GDs~~Di~~~~~~A~~a 229 (268)
||+.+|+.+ |+++
T Consensus 185 GD~~~Di~a----A~~a 197 (197)
T TIGR01548 185 GDTVDDIIT----GRKA 197 (197)
T ss_pred eCCHHHHHH----HHhC
Confidence 999999999 8764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.8e-20 Score=145.60 Aligned_cols=117 Identities=26% Similarity=0.274 Sum_probs=94.0
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCH---------------HHHHHHHHHhcCCCCCCCeEEec--------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL-------------- 186 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~---------------~~~~~~l~~~~gl~~~f~~i~~~-------------- 186 (268)
.++||+.++| +++|++++|+||++. ......+.. .++. |+.++.+
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCCC
Confidence 3779999999 689999999999984 344456666 5665 6665532
Q ss_pred -CCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeE-EEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 187 -GTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 187 -~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~-v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
..||+|+++..+.+++++.|++++||||+..|+++ |+++|+.+ +++.||+..... .. ..|++++.++.+|.
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~a----A~~aG~~~~i~v~~g~~~~~~-~~--~~ad~~i~~~~el~ 175 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQA----GVAAKVKTNVLVRTGKPITPE-AE--NIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHH----HHHCCCcEEEEEecCCccccc-cc--ccCCEEeccHHHhh
Confidence 12699999999999999999999999999999999 99999988 899998653222 21 35899999999986
Q ss_pred h
Q 024415 265 R 265 (268)
Q Consensus 265 ~ 265 (268)
+
T Consensus 176 ~ 176 (176)
T TIGR00213 176 Q 176 (176)
T ss_pred C
Confidence 4
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-20 Score=149.58 Aligned_cols=84 Identities=19% Similarity=0.172 Sum_probs=76.8
Q ss_pred cCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEEE
Q 024415 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 137 ~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
..+++||+.++|+ +++|+||++...++..+++ +|+..+|+.+++++. ||+|+++..+.++.+++|++|+||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 4569999999998 4899999999999999999 899999999988865 599999999999999999999999
Q ss_pred ecCccchhccccccccc
Q 024415 213 EDRLATLKNVIKEPELD 229 (268)
Q Consensus 213 GDs~~Di~~~~~~A~~a 229 (268)
||+..|+.+ |+++
T Consensus 163 gD~~~Di~~----A~~~ 175 (175)
T TIGR01493 163 AAHQWDLIG----ARKF 175 (175)
T ss_pred ecChhhHHH----HhcC
Confidence 999999999 8763
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-20 Score=143.62 Aligned_cols=87 Identities=23% Similarity=0.271 Sum_probs=78.3
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC---CChHHHHHHHHhcCCCCCCcEE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT---GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~---~pk~~~~~~~~~~~~~~~~~~l 210 (268)
....+||+.++| +++|++++|+||+....+...++. + +..+|+.+++++. ||+|+++.+++.+++++| +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 335679999999 578999999999999999999998 5 7889999988764 599999999999999999 999
Q ss_pred EEecCccchhcccccccccC
Q 024415 211 FVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG 230 (268)
||||+..|+++ |+++|
T Consensus 139 ~iGDs~~Di~a----a~~aG 154 (154)
T TIGR01549 139 HVGDNLNDIEG----ARNAG 154 (154)
T ss_pred EEeCCHHHHHH----HHHcc
Confidence 99999999999 99887
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=141.71 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=90.0
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCC-CHHHHHHHHHHhcCCC---------CCCCeEEecCCC----ChHHHHHHH
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTK-QSRFADALLRELAGVT---------IPPDRIYGLGTG----PKVEVLKQL 198 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~-~~~~~~~~l~~~~gl~---------~~f~~i~~~~~~----pk~~~~~~~ 198 (268)
...+++||+.++| +++|++++|+||+ ....++..++. +|+. .+|+.+++++.. |.+.+++++
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 3457899999999 6899999999998 88889999999 8998 999999998652 446677888
Q ss_pred HhcC--CCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCH
Q 024415 199 QKKP--ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 243 (268)
Q Consensus 199 ~~~~--~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~ 243 (268)
.+.. +++|++|+||||++.|+.+ |+++|+.++++.+|+.-.
T Consensus 121 ~~~~~~gl~p~e~l~VgDs~~di~a----A~~aGi~~i~v~~g~~~~ 163 (174)
T TIGR01685 121 NKVDPSVLKPAQILFFDDRTDNVRE----VWGYGVTSCYCPSGMDKG 163 (174)
T ss_pred hhcccCCCCHHHeEEEcChhHhHHH----HHHhCCEEEEcCCCccHH
Confidence 7777 8999999999999999999 999999999999997443
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=142.16 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=88.7
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhc---CCCCCCCeEEecC--CCChHHHHHHHHhcCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELA---GVTIPPDRIYGLG--TGPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~---gl~~~f~~i~~~~--~~pk~~~~~~~~~~~~~~~ 206 (268)
....+++||+.++| +++|++++|+||++...+...++. . ++..+|+.++... .||+|+.+.++.++++++|
T Consensus 91 ~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 91 ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh
Confidence 44568999999999 689999999999999988888877 5 5666677665433 3699999999999999999
Q ss_pred CcEEEEecCccchhcccccccccCCeEEEeecCCCC
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 242 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~ 242 (268)
++++||||+..|+++ |+++||.++++.++.+.
T Consensus 170 ~e~lfVgDs~~Di~A----A~~AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 170 REILFLSDIINELDA----ARKAGLHTGQLVRPGND 201 (220)
T ss_pred hHEEEEeCCHHHHHH----HHHcCCEEEEEECCCCC
Confidence 999999999999999 99999999999987543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.77 E-value=9e-18 Score=136.77 Aligned_cols=94 Identities=13% Similarity=0.010 Sum_probs=79.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC-C-------------CChHHHHHHHH
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-T-------------GPKVEVLKQLQ 199 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~-~-------------~pk~~~~~~~~ 199 (268)
..+++||+.++| +++|++++|+||+....++..++. +|+..+|+..+..+ . .+|+++++++.
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 457999999999 689999999999999999999999 79987776554432 1 13457889999
Q ss_pred hcCCCCCCcEEEEecCccchhcccccccccCCeEEE
Q 024415 200 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 200 ~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~ 235 (268)
++.++++++++||||+.+|+.+ |+.+|+.++.
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~----a~~ag~~~a~ 188 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPM----FEVADISISL 188 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHH----HHhcCCeEEE
Confidence 9999999999999999999999 9999996654
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.1e-19 Score=144.35 Aligned_cols=104 Identities=17% Similarity=0.222 Sum_probs=89.4
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
.....+++.++| +..|..++++||.+...- ..+.. +|+..+||.++.|.. ||+|++++.++++.+..|++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 456778888888 699999999999988775 77777 799999999988754 599999999999999999999
Q ss_pred EEEecCc-cchhcccccccccCCeEEEeecCCCCHHHH
Q 024415 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKER 246 (268)
Q Consensus 210 l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~ 246 (268)
+||||+. +|+++ |+++||+++.|..+.+...++
T Consensus 189 vhIgD~l~nD~~g----A~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 189 VHIGDLLENDYEG----ARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred EEecCccccccHh----HHHcCCEEEEEccccchhhhh
Confidence 9999995 78999 999999999998765444343
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.2e-18 Score=139.17 Aligned_cols=121 Identities=15% Similarity=0.110 Sum_probs=83.1
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC--CC--CeEEecCC----CChHHH----------
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI--PP--DRIYGLGT----GPKVEV---------- 194 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~--~f--~~i~~~~~----~pk~~~---------- 194 (268)
...+++||+.++| +++|++++|+||+....++..+++ + +.. .+ +..++++. +|.|..
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 148 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCC 148 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCc
Confidence 4467999999999 699999999999999999999998 6 543 11 22233222 243322
Q ss_pred HHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 195 LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 195 ~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
-..+..+++..+.+|+|||||.+|+.+ |++||+.++ .+. ..+.... ...|.+.+.++.|+...|
T Consensus 149 K~~~l~~~~~~~~~~i~iGDs~~Di~a----a~~Ag~~~a---~~~-l~~~~~~-~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 149 KPSLIRKLSDTNDFHIVIGDSITDLEA----AKQADKVFA---RDF-LITKCEE-LGIPYTPFETFHDVQTEL 212 (219)
T ss_pred hHHHHHHhccCCCCEEEEeCCHHHHHH----HHHCCccee---HHH-HHHHHHH-cCCCccccCCHHHHHHHH
Confidence 123344556677789999999999999 999999333 221 1111122 235888999999987765
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.7e-18 Score=139.98 Aligned_cols=98 Identities=8% Similarity=-0.022 Sum_probs=81.0
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCC----CHHHHHHHHHHhcCCCCCCCeEEecCCC--ChHHHHHHHHhcCCCCCC
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTK----QSRFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~----~~~~~~~~l~~~~gl~~~f~~i~~~~~~--pk~~~~~~~~~~~~~~~~ 207 (268)
...+++++.++| +++|+++++|||+ ....++..++. +|+..+|+.+++++.. |||+... +..+++++
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~~-~l~~~~i~-- 187 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKTQ-WIQDKNIR-- 187 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHHH-HHHhCCCe--
Confidence 345677799999 6999999999998 66788889998 8999999999998752 4554443 44566775
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHH
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 244 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~ 244 (268)
+||||+.+|+.+ |+++|+.++.+.||++...
T Consensus 188 --i~vGDs~~DI~a----Ak~AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 188 --IHYGDSDNDITA----AKEAGARGIRILRASNSTY 218 (237)
T ss_pred --EEEeCCHHHHHH----HHHCCCCEEEEEecCCCCC
Confidence 999999999999 9999999999999987654
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-18 Score=133.83 Aligned_cols=95 Identities=24% Similarity=0.292 Sum_probs=78.0
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCH---------------HHHHHHHHHhcCCCCCCCeEEe----cC----CCChH
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYG----LG----TGPKV 192 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~---------------~~~~~~l~~~~gl~~~f~~i~~----~~----~~pk~ 192 (268)
+++||+.++| +++|++++|+||+++ ..+...++. +|+... ..+++ ++ .||+|
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~-~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVD-GVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCcee-EEEECCCCCCCCCCCCCCCH
Confidence 3778998888 799999999999874 456677888 788521 12221 22 26999
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
++++.+.++++++|++|+||||+..|+++ |+++|+.+||+..|
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~----A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQA----ARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHH----HHHCCCCEEEecCC
Confidence 99999999999999999999999999999 99999999999765
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.2e-18 Score=128.43 Aligned_cols=91 Identities=31% Similarity=0.413 Sum_probs=77.9
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCC--------HHHHHHHHHHhcCCCCCCCeEEecC--CCChHHHHHHHHhcC-CCC
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQ--------SRFADALLRELAGVTIPPDRIYGLG--TGPKVEVLKQLQKKP-ELQ 205 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~--------~~~~~~~l~~~~gl~~~f~~i~~~~--~~pk~~~~~~~~~~~-~~~ 205 (268)
++||+.++| +++|++++|+||+. ...+...++. +|+. ++.++.+. .||+|++++.+..+. +++
T Consensus 26 ~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 26 LYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVP--IDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred eCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCC--EEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 678888888 68999999999998 7888899999 7885 33333322 369999999999999 599
Q ss_pred CCcEEEEec-CccchhcccccccccCCeEEEee
Q 024415 206 GMTLHFVED-RLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 206 ~~~~l~IGD-s~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
|++++|||| +..|+.+ |+++|+.+|++.
T Consensus 103 ~~~~v~IGD~~~~Di~~----A~~~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQA----AKRAGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCcccHHH----HHHCCCeEEEee
Confidence 999999999 6999999 999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-18 Score=135.34 Aligned_cols=122 Identities=15% Similarity=0.032 Sum_probs=96.0
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHH--------HHHHHHHHhcCCCCCCCeEE-ecC----CCChHHHHHHHHhcC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSR--------FADALLRELAGVTIPPDRIY-GLG----TGPKVEVLKQLQKKP 202 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~--------~~~~~l~~~~gl~~~f~~i~-~~~----~~pk~~~~~~~~~~~ 202 (268)
.++||+.++| +++|++++|+||++.. .....++. +|+..+|..+. +++ .||+|+++.++.+++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l 106 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKH 106 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHc
Confidence 4789999999 6889999999998742 23344666 67755443332 222 369999999999999
Q ss_pred CCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCH------HHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 203 ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ------KEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 203 ~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~------~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+.+|++|+||||+..|+.+ |+++|+.+|++.||++.. +.+.. ..|++++.++.||.++|
T Consensus 107 ~~~p~~~i~IGD~~~Di~a----A~~aGi~~i~v~~g~~~~~~~~~~~~l~~--~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 107 GLDLTQCAVIGDRWTDIVA----AAKVNATTILVRTGAGYDALHTYRDKWAH--IEPNYIAENFEDAVNWI 171 (173)
T ss_pred CCCHHHeEEEcCCHHHHHH----HHHCCCeEEEEecCCCchhhhhhhccccc--CCCcchhhCHHHHHHHH
Confidence 9999999999999999999 999999999999987542 12222 46899999999998754
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7e-17 Score=132.09 Aligned_cols=115 Identities=14% Similarity=0.108 Sum_probs=83.1
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEec--------CC--C--ChHHHHHHHHh
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL--------GT--G--PKVEVLKQLQK 200 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~--------~~--~--pk~~~~~~~~~ 200 (268)
...+++||+.++| +++ ++++|+||+....++..+++ +|+..+|+..+.. .. + ||...++.+..
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 4567899999999 566 99999999999999999999 8998777653321 11 1 34445554443
Q ss_pred cCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCE-EEcCHhHHHhhc
Q 024415 201 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQLSDFSRKL 267 (268)
Q Consensus 201 ~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~-~~~~~~~l~~~l 267 (268)
.+.+++|||||.+|+.+ ++++|+.. ++ +. .+.... ..|++ .+.++.+|..+|
T Consensus 143 ----~~~~~v~iGDs~~D~~~----~~aa~~~v-~~--~~--~~~~~~--~~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 143 ----LGYRVIAAGDSYNDTTM----LGEADAGI-LF--RP--PANVIA--EFPQFPAVHTYDELLAAI 195 (205)
T ss_pred ----hCCeEEEEeCCHHHHHH----HHhCCCCE-EE--CC--CHHHHH--hCCcccccCCHHHHHHHH
Confidence 45678999999999999 99999743 32 22 222222 24666 899999998765
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=129.55 Aligned_cols=99 Identities=22% Similarity=0.214 Sum_probs=84.9
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCC---------------HHHHHHHHHHhcCCCCCCCeE-Ee----cCC----CCh
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRI-YG----LGT----GPK 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~---------------~~~~~~~l~~~~gl~~~f~~i-~~----~~~----~pk 191 (268)
+++||+.++| +++|++++|+||.+ ...+...++. +|+. |+.+ ++ ++. ||+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~KP~ 105 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCRKPK 105 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCCCCC
Confidence 4789999999 68899999999973 5577888999 7996 7655 44 333 599
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHH
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 244 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~ 244 (268)
|+++..+.++++++|++++||||+..|+++ |+++|+.++++.++.-++.
T Consensus 106 ~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~----A~~aGi~~i~~~~~~~~~~ 154 (161)
T TIGR01261 106 IKLLEPYLKKNLIDKARSYVIGDRETDMQL----AENLGIRGIQYDEEELNWD 154 (161)
T ss_pred HHHHHHHHHHcCCCHHHeEEEeCCHHHHHH----HHHCCCeEEEEChhhcCHH
Confidence 999999999999999999999999999999 9999999999998865554
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.3e-17 Score=131.67 Aligned_cols=120 Identities=12% Similarity=0.065 Sum_probs=96.6
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcC-CCCCCCeEEecCC------CChHHHHHHHHhcCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG-VTIPPDRIYGLGT------GPKVEVLKQLQKKPEL 204 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~g-l~~~f~~i~~~~~------~pk~~~~~~~~~~~~~ 204 (268)
.....+.||+.+++ +.+|++++++|+.++......+++ ++ +...|+.++.++. ||+|+++-.....++.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 45567899999999 699999999999999999998888 45 6677887776332 4999999999999999
Q ss_pred CC-CcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 205 QG-MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 205 ~~-~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
.| +.|++++|++.++++ |++|||.+|++.+. .-...+. ..+++.+.++.++
T Consensus 167 ~~~~k~lVfeds~~Gv~a----a~aagm~vi~v~~~-~~~~~~~---~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 167 PPPSKCLVFEDSPVGVQA----AKAAGMQVVGVATP-DLSNLFS---AGATLILESLEDF 218 (222)
T ss_pred CCccceEEECCCHHHHHH----HHhcCCeEEEecCC-Ccchhhh---hccceeccccccc
Confidence 88 999999999999999 99999999999872 2222222 3456777766554
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.6e-16 Score=123.40 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=75.7
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-----------------------C-C
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-----------------------G-P 190 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-----------------------~-p 190 (268)
.+++||+.++| +++|++++|+||+....++..++. +|+..+|+.+++++. + +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 57999999999 688999999999999999999999 799999999886421 2 6
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCe
Q 024415 191 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 191 k~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~ 232 (268)
|+++++++..+. +.+++||||+.+|+.+ |+++++.
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~a----a~~~d~~ 184 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCP----AKLSDVV 184 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhch----HhcCCcc
Confidence 899999988764 7888999999999999 9998763
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=132.23 Aligned_cols=119 Identities=14% Similarity=0.135 Sum_probs=90.5
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC-------eEEec----C---CCChHHHHHHH
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD-------RIYGL----G---TGPKVEVLKQL 198 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~-------~i~~~----~---~~pk~~~~~~~ 198 (268)
...+++||+.++| ++.|++++|+|++.....+..++. +|+...+. ..+++ + .+||+++++.+
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 3467999999998 799999999999999888988888 78865332 11211 1 24999999999
Q ss_pred HhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhhc
Q 024415 199 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 267 (268)
Q Consensus 199 ~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~l 267 (268)
.+++++.+++|++|||+.+|+.+ ++.||+.+++ |.....++ .+++.++ ++..+..+|
T Consensus 257 a~~lgi~~~qtIaVGDg~NDl~m----~~~AGlgiA~-----nAkp~Vk~---~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 257 AQEYEIPLAQTVAIGDGANDLPM----IKAAGLGIAY-----HAKPKVNE---QAQVTIRHADLMGVLCIL 315 (322)
T ss_pred HHHcCCChhhEEEEECCHHHHHH----HHHCCCeEEe-----CCCHHHHh---hCCEEecCcCHHHHHHHh
Confidence 99999999999999999999999 9999986554 34445554 3556655 444444443
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-16 Score=125.29 Aligned_cols=89 Identities=21% Similarity=0.261 Sum_probs=74.8
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHH------------HHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHh
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSR------------FADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQK 200 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~------------~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~ 200 (268)
++||+.++| +++|++++|+||++.. .++..++. +|+. ++.+++++. +|+|++++++.+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVP--IQVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCC--EEEEEecCCCCCCCCccHHHHHHHH
Confidence 679999988 6899999999998763 46778898 7984 355555442 589999999999
Q ss_pred cCC--CCCCcEEEEecCc--------cchhcccccccccCCeEEE
Q 024415 201 KPE--LQGMTLHFVEDRL--------ATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 201 ~~~--~~~~~~l~IGDs~--------~Di~~~~~~A~~aG~~~v~ 235 (268)
+.+ +.+++++||||+. .|+++ |+++|+.+++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~a----A~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKF----AKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHH----HHHCCCCcCC
Confidence 998 8999999999996 69999 9999998875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.8e-17 Score=137.61 Aligned_cols=122 Identities=10% Similarity=-0.013 Sum_probs=97.3
Q ss_pred CCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC-------CCChHHHHHHHHhcCCCCCCcEE
Q 024415 141 YPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-------TGPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 141 ~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~-------~~pk~~~~~~~~~~~~~~~~~~l 210 (268)
|+++.+.+ +..+++++++||.++......+.. .|+..+|+.+.++. .||+|++++.+.++++.+|++++
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence 55666655 578899999999888766555556 67777777655332 26999999999999999999999
Q ss_pred EEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 211 FVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 211 ~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
||||+. .|+.+ |+++|+.+++|.||.....+.+.....|++++.++.+|.++|
T Consensus 201 ~vGD~~~~Di~~----a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 201 MIGDDCRDDVGG----AQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EECCCcHHHHHH----HHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 999996 89999 999999999999996554444333467999999999998754
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-15 Score=126.70 Aligned_cols=98 Identities=11% Similarity=-0.010 Sum_probs=78.3
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCC----HHHHHHHHHHhcCC--CCCCCeEEecCC--CChHHHHHHHHhcCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQ----SRFADALLRELAGV--TIPPDRIYGLGT--GPKVEVLKQLQKKPE 203 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~----~~~~~~~l~~~~gl--~~~f~~i~~~~~--~pk~~~~~~~~~~~~ 203 (268)
.....++||+.++| +++|+++++|||++ ...++.+++. +|+ ..+|+.+++++. +|.+. . ..++++
T Consensus 110 ~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~--~-~l~~~~ 185 (237)
T PRK11009 110 DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKT--Q-WLKKKN 185 (237)
T ss_pred cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHH--H-HHHhcC
Confidence 34467899999999 69999999999953 5577777877 799 889999988875 33332 2 223566
Q ss_pred CCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHH
Q 024415 204 LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 244 (268)
Q Consensus 204 ~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~ 244 (268)
++ +||||+.+|+++ |++||+.+|.+.||++...
T Consensus 186 i~----I~IGDs~~Di~a----A~~AGi~~I~v~~G~~~~~ 218 (237)
T PRK11009 186 IR----IFYGDSDNDITA----AREAGARGIRILRAANSTY 218 (237)
T ss_pred Ce----EEEcCCHHHHHH----HHHcCCcEEEEecCCCCCC
Confidence 65 999999999999 9999999999999987543
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.8e-16 Score=134.62 Aligned_cols=118 Identities=16% Similarity=0.153 Sum_probs=90.9
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHH-HHHHHhcCCCCCCCeEEe---cC----CCChHHHHHHHHhcCCCCCCc
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFAD-ALLRELAGVTIPPDRIYG---LG----TGPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~-~~l~~~~gl~~~f~~i~~---~~----~~pk~~~~~~~~~~~~~~~~~ 208 (268)
-|+|+.+++ +++|. ++|+||.+..... ..+.. .|+..+|+.+.+ .+ .||+|++++.+.++++..|++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~ 221 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR 221 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence 467888877 56676 7999998864321 12223 455555555432 22 259999999999999999999
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhh------cCCCCEEEcCHhHH
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA------ASIPRIQLLQLSDF 263 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~------~~~p~~~~~~~~~l 263 (268)
++||||+. .||.+ |+++|+.+++|.||+...+++... ...||+++.++.+|
T Consensus 222 ~lmIGD~~~tDI~~----A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 222 TLMVGDRLETDILF----GHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEEECCChHHHHHH----HHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999995 89999 999999999999999888887642 34799999999874
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-14 Score=119.93 Aligned_cols=117 Identities=12% Similarity=0.160 Sum_probs=80.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC---CeEEecCC----CCh--------------H
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP---DRIYGLGT----GPK--------------V 192 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f---~~i~~~~~----~pk--------------~ 192 (268)
..+++||+.++| +++|++++|+|++....++..++. ++....+ +.++.++. +|. .
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 457999999999 688999999999999999999998 5543333 22333322 243 3
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.+++.+. ..+++++||||+.+|+.+ |+.||+ +++ .++ .....+. .-.|...+.++.|+...|
T Consensus 147 ~~l~~~~----~~~~~~i~iGDg~~D~~~----a~~Ad~-~~a--r~~-l~~~~~~-~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 147 SLIRKLS----EPNDYHIVIGDSVTDVEA----AKQSDL-CFA--RDY-LLNECEE-LGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred HHHHHHh----hcCCcEEEEeCCHHHHHH----HHhCCe-eEe--hHH-HHHHHHH-cCCCccCcCCHHHHHHHH
Confidence 4444443 356778999999999999 999998 222 221 1111222 234778889999987765
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.1e-16 Score=116.12 Aligned_cols=81 Identities=21% Similarity=0.114 Sum_probs=73.2
Q ss_pred CCCChHHHH---HcCCCeEEEEcCC-CHHHHHHHHHHhcC-------CCCCCCeEEecCCCChHHHHHHHHhcCC--CCC
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTK-QSRFADALLRELAG-------VTIPPDRIYGLGTGPKVEVLKQLQKKPE--LQG 206 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~-~~~~~~~~l~~~~g-------l~~~f~~i~~~~~~pk~~~~~~~~~~~~--~~~ 206 (268)
++||+.++| +++|++++|+||+ ....+...++. ++ +..+|+.+++++.+|+|+++..+.++.+ ++|
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 667788877 6899999999999 88888888898 78 7889999999877899999999999999 999
Q ss_pred CcEEEEecCccchhc
Q 024415 207 MTLHFVEDRLATLKN 221 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~ 221 (268)
++|+||||+..|+..
T Consensus 109 ~~~l~igDs~~n~~~ 123 (128)
T TIGR01681 109 KSILFVDDRPDNNEE 123 (128)
T ss_pred ceEEEECCCHhHHHH
Confidence 999999999999877
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=8e-15 Score=128.12 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=84.6
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCC---------------CHHHHHHHHHHhcCCCCCCCeE-Eec----C----CCC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRI-YGL----G----TGP 190 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~---------------~~~~~~~~l~~~~gl~~~f~~i-~~~----~----~~p 190 (268)
.+++||+.++| +++|++++|+||+ ....+...++. .|+. |+.+ ++. + .+|
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCCCCC
Confidence 45889999999 6899999999995 34456667888 6883 6665 442 2 259
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 191 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 191 k~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
+|+++.++..++++.|++++||||+.+|+++ |+++|+.+|+++...-.+++.+.
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~a----Ak~aGi~~I~v~~~~~~~~~i~~ 159 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQL----AENMGIKGIRYARETLNWDAIAE 159 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHH----HHHCCCeEEEEECCCCCHHHHHH
Confidence 9999999999999999999999999999999 99999999999876555555443
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-14 Score=114.72 Aligned_cols=100 Identities=17% Similarity=0.166 Sum_probs=86.4
Q ss_pred ccCCCCCChHHHH-HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----------CChHHHHHHHHhcCCC
Q 024415 136 GANRFYPGIPDAL-KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----------GPKVEVLKQLQKKPEL 204 (268)
Q Consensus 136 ~~~~~~pg~~e~L-~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----------~pk~~~~~~~~~~~~~ 204 (268)
+...+.|-.+++| +-...+.++.||+....+.++|++ +|+.+.|+.|++.+. ||.+++++.+.+..|+
T Consensus 97 q~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi 175 (244)
T KOG3109|consen 97 QDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGI 175 (244)
T ss_pred hhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCC
Confidence 3356677788888 333333899999999999999999 899999999988753 4889999999999999
Q ss_pred C-CCcEEEEecCccchhcccccccccCCeEEEeecCC
Q 024415 205 Q-GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 240 (268)
Q Consensus 205 ~-~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~ 240 (268)
. |.+++|++||.++|++ |++.|+.++++....
T Consensus 176 ~~p~~t~FfDDS~~NI~~----ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 176 DSPRNTYFFDDSERNIQT----AKEVGLKTVLVGREH 208 (244)
T ss_pred CCcCceEEEcCchhhHHH----HHhccceeEEEEeee
Confidence 8 9999999999999999 999999999987664
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=112.63 Aligned_cols=113 Identities=16% Similarity=0.168 Sum_probs=87.5
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe-E
Q 024415 108 WSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR-I 183 (268)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~-i 183 (268)
.|++.+++......+.+... ...++||+.++| +++|++++|+|++....++..++. +|+...|.. +
T Consensus 65 ~g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l 134 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRL 134 (202)
T ss_pred cCCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecce
Confidence 36666766555554444432 235889999999 689999999999999999999999 799877654 2
Q ss_pred Ee-------cC------CC-ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEE
Q 024415 184 YG-------LG------TG-PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 184 ~~-------~~------~~-pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v 234 (268)
.. +. .+ +|...++++..+.++.++++++||||.+|+.+ ++.+|..++
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~----~~~a~~~~~ 195 (202)
T TIGR01490 135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPL----LSLVGHPYV 195 (202)
T ss_pred EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHH----HHhCCCcEE
Confidence 21 11 01 56788999988889999999999999999999 999997554
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.9e-15 Score=115.74 Aligned_cols=99 Identities=11% Similarity=0.038 Sum_probs=82.4
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
+.|+++|++++|+||++...+...++. +|+..+|+. .+|||++++.++.++++.+++|+||||+.+|+.+
T Consensus 38 ~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~---- 107 (154)
T TIGR01670 38 RCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPV---- 107 (154)
T ss_pred HHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----
Confidence 555889999999999999999999999 798776652 3699999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
++++|+. +++.++. .... ..|++++.+..
T Consensus 108 ~~~ag~~-~~v~~~~---~~~~---~~a~~i~~~~~ 136 (154)
T TIGR01670 108 MEKVGLS-VAVADAH---PLLI---PRADYVTRIAG 136 (154)
T ss_pred HHHCCCe-EecCCcC---HHHH---HhCCEEecCCC
Confidence 9999996 7776553 2333 34678777654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-14 Score=108.54 Aligned_cols=93 Identities=23% Similarity=0.216 Sum_probs=81.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------------------CChHHHH
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------------------GPKVEVL 195 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------------------~pk~~~~ 195 (268)
+++||+.++| +++|++++++||+....+...++. .|+..+++.+++... +|++..+
T Consensus 24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (139)
T cd01427 24 ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL 102 (139)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence 4677888887 578999999999999999999999 799888888876541 5789999
Q ss_pred HHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEe
Q 024415 196 KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 236 (268)
Q Consensus 196 ~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v 236 (268)
+.+..+.+..++++++|||+.+|+.+ |+++|+.+++|
T Consensus 103 ~~~~~~~~~~~~~~~~igD~~~d~~~----~~~~g~~~i~v 139 (139)
T cd01427 103 LAALKLLGVDPEEVLMVGDSLNDIEM----AKAAGGLGVAV 139 (139)
T ss_pred HHHHHHcCCChhhEEEeCCCHHHHHH----HHHcCCceeeC
Confidence 99999999999999999999999999 99999998875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-14 Score=125.78 Aligned_cols=96 Identities=17% Similarity=0.055 Sum_probs=86.4
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC-CCCeEEecC----------C-CChHHHHHHHHhcCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLG----------T-GPKVEVLKQLQKKPE 203 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~-~f~~i~~~~----------~-~pk~~~~~~~~~~~~ 203 (268)
.++||+.++| +++|++++++||++....+..++. +++.. +|+.+++.+ . +|+|+++...+.+.+
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~ 265 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKI 265 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHh
Confidence 5788988888 688999999999999999999999 79986 899988876 2 489999999988877
Q ss_pred C-CCCcEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 204 L-QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 204 ~-~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
. .+++|+||||+..|+.+ |+++|+.+++|.||
T Consensus 266 ~~~~~~~~~vgD~~~d~~~----a~~~Gi~~i~v~~g 298 (300)
T PHA02530 266 APKYDVLLAVDDRDQVVDM----WRRIGLECWQVAPG 298 (300)
T ss_pred ccCceEEEEEcCcHHHHHH----HHHhCCeEEEecCC
Confidence 7 57999999999999999 99999999999987
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-13 Score=108.20 Aligned_cols=89 Identities=19% Similarity=0.195 Sum_probs=73.0
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC-------------C--C-ChHHHHH
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-------------T--G-PKVEVLK 196 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~-------------~--~-pk~~~~~ 196 (268)
...+++||+.++| +++|++++|+|++....++..++. +|+...+...+..+ . + +|+..++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 3456889999999 689999999999999999999999 79987665432221 1 1 5788999
Q ss_pred HHHhcCCCCCCcEEEEecCccchhccccccccc
Q 024415 197 QLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 197 ~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~a 229 (268)
++..+.++.++++++||||.+|+.+ ++.+
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~----~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPM----LKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHH----HhcC
Confidence 9888889999999999999999999 7653
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.5e-14 Score=114.14 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=82.4
Q ss_pred HHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccc
Q 024415 148 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 148 L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~ 227 (268)
|+++|++++|+||.+...+...++. +|+..+|+ ...+|++.++.+++++++.+++++||||+.+|+.+ |+
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~-----g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~----a~ 129 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ-----GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPV----ME 129 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec-----CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHH----HH
Confidence 4678999999999999999999999 79877665 22478999999999999999999999999999999 99
Q ss_pred ccCCeEEEeecCCCCHHHHHhhcCCCCEEEc------CHhHHHhhc
Q 024415 228 LDGWNLYLGDWGYNTQKEREEAASIPRIQLL------QLSDFSRKL 267 (268)
Q Consensus 228 ~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~------~~~~l~~~l 267 (268)
++|+.+ .+. +...+.. ..|++++. .+.++.++|
T Consensus 130 ~aG~~~-~v~----~~~~~~~--~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 130 KVGLSV-AVA----DAHPLLL--PRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HCCCeE-ecC----ChhHHHH--HhCCEEecCCCCCCHHHHHHHHH
Confidence 999984 443 2223322 24678885 577776543
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-14 Score=114.48 Aligned_cols=96 Identities=18% Similarity=0.176 Sum_probs=79.7
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
..|+++|++++|+||++...++..++. +|+..+|+.+ +|||+.++.+..++++.++++++|||+.+|+.+
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~---- 113 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSM---- 113 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHH----
Confidence 345788999999999999999999999 8998888743 699999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 258 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~ 258 (268)
++.+|+..+. . +....++.. ++++..
T Consensus 114 ~~~ag~~~am-~---nA~~~lk~~---A~~I~~ 139 (169)
T TIGR02726 114 MKRVGLAVAV-G---DAVADVKEA---AAYVTT 139 (169)
T ss_pred HHHCCCeEEC-c---CchHHHHHh---CCEEcC
Confidence 9999986554 2 334455542 445543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.3e-13 Score=110.05 Aligned_cols=115 Identities=10% Similarity=0.100 Sum_probs=81.6
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe--EE------ecC---CC-ChHHHHHHHHh
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR--IY------GLG---TG-PKVEVLKQLQK 200 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~--i~------~~~---~~-pk~~~~~~~~~ 200 (268)
...+++||+.++| +++ .+++|+|++....+..+++. +|+..+|.. .+ ++. .+ +|...++.+..
T Consensus 65 ~~i~l~pga~ell~~lk~~-~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~ 142 (203)
T TIGR02137 65 ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 142 (203)
T ss_pred HhCCCCccHHHHHHHHHhC-CeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHh
Confidence 3457899999999 454 59999999999999999999 899887762 22 221 12 45666776643
Q ss_pred cCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCE-EEcCHhHHHhhc
Q 024415 201 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQLSDFSRKL 267 (268)
Q Consensus 201 ~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~-~~~~~~~l~~~l 267 (268)
.+ .++++|||+.+|+.+ ++.+|...+. +.+..... .-|++ .+.+.++|...+
T Consensus 143 -~~---~~~v~vGDs~nDl~m----l~~Ag~~ia~-----~ak~~~~~--~~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 143 -LY---YRVIAAGDSYNDTTM----LSEAHAGILF-----HAPENVIR--EFPQFPAVHTYEDLKREF 195 (203)
T ss_pred -hC---CCEEEEeCCHHHHHH----HHhCCCCEEe-----cCCHHHHH--hCCCCCcccCHHHHHHHH
Confidence 33 268999999999999 9999986654 22333332 23555 567777776654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.1e-14 Score=112.39 Aligned_cols=100 Identities=20% Similarity=0.247 Sum_probs=84.3
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCC-HHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~-~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
..++||+.++| +++|++++|+||++ ...+...++. +|+..++ ...+|+|+++..++++.++.+++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 46899999998 68899999999998 5677777777 6764322 2347999999999999999999999999
Q ss_pred cCc-cchhcccccccccCCeEEEeecCCCCHHHHH
Q 024415 214 DRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKERE 247 (268)
Q Consensus 214 Ds~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~ 247 (268)
|+. .|+.+ |+++|+.+|++.||+...+.+.
T Consensus 116 Ds~~~Di~a----A~~aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 116 DRLFTDVMG----GNRNGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CcchHHHHH----HHHcCCeEEEEccCcCCccccc
Confidence 998 79999 9999999999999986654443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-13 Score=115.09 Aligned_cols=71 Identities=13% Similarity=0.155 Sum_probs=63.4
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
||+|++++.+.+.++.++++++||||+. .|+.+ |+++|+.+++|.||+...+++......|++++.++.+|
T Consensus 178 KP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~----a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 178 KPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRA----GIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CChHHHHHHHHHHcCCCcccEEEECCCchhhHHH----HHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 4779999999999999999999999996 89999 99999999999999887777766556799999998874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=7e-13 Score=108.69 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=79.1
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------------CChHHHHHHHHh
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------------GPKVEVLKQLQK 200 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------------~pk~~~~~~~~~ 200 (268)
.+++||+.+++ +++|++++|+|++....++.+.+. +|++..+...+..++ ..|.+.++++..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 67999999999 799999999999999999999999 799877765433221 147889999999
Q ss_pred cCCCCCCcEEEEecCccchhcccccccccCCeEE
Q 024415 201 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 201 ~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v 234 (268)
+.++.+++++++|||.+|+.+ -+.+|...+
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpm----l~~ag~~ia 184 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPM----LEAAGLPIA 184 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHH----HHhCCCCeE
Confidence 999999999999999999999 888996444
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-13 Score=111.61 Aligned_cols=85 Identities=21% Similarity=0.300 Sum_probs=76.5
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--CChHHHHHHHHhcCCCCCCcEEEE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--GPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
.+++||+.++| ++.|++++++||.....+....+. +|+ ++.++.+.. +|.+.++.++.+.++..+++|+||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi---~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGI---FDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTS---CSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccc---ccccccccccccccchhHHHHHHHHhcCCCEEEEE
Confidence 37899999999 689999999999999999999999 798 555666665 799999999999999999999999
Q ss_pred ecCccchhcccccccccC
Q 024415 213 EDRLATLKNVIKEPELDG 230 (268)
Q Consensus 213 GDs~~Di~~~~~~A~~aG 230 (268)
||+.+|+.+ +++||
T Consensus 202 GDg~nD~~a----l~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPA----LKAAG 215 (215)
T ss_dssp ESSGGHHHH----HHHSS
T ss_pred ccCHHHHHH----HHhCc
Confidence 999999999 99886
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-14 Score=119.66 Aligned_cols=72 Identities=15% Similarity=0.117 Sum_probs=66.4
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
||+|++++.+.++.+.+|++++||||+. +|+.+ |+++|+.+++|.||.+..++++.....|++.+.++.+|.
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~----A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILA----GFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHH----HHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 5999999999999999999999999996 89999 999999999999999888888765568999999999984
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-11 Score=101.40 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=87.5
Q ss_pred hccCCCCCChHHHHH-----cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------------------C
Q 024415 135 IGANRFYPGIPDALK-----FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------------------G 189 (268)
Q Consensus 135 ~~~~~~~pg~~e~L~-----~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------------------~ 189 (268)
....++.||+.++++ +.|+.++|+|.+..-+++..|++ .|+...|+.|++... +
T Consensus 67 l~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 67 LRSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred HHcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 467789999999992 46999999999999999999999 899999998887531 1
Q ss_pred ----ChHHHHHHHHhc---CCCCCCcEEEEecCccchhcccccccccCC-eEEEeecCCCCHHHHHh
Q 024415 190 ----PKVEVLKQLQKK---PELQGMTLHFVEDRLATLKNVIKEPELDGW-NLYLGDWGYNTQKEREE 248 (268)
Q Consensus 190 ----pk~~~~~~~~~~---~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~-~~v~v~~g~~~~~~~~~ 248 (268)
.|..+++++... .+....+++||||+.+|+-+ +.+.+- +.+....||.-.+.+.+
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp----~~~L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP----ALRLRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc----ccccCCCCEEecCCCChHHHHHhc
Confidence 257777777765 36778999999999999999 776554 66777778766655554
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-13 Score=92.53 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=65.7
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 188 TGPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 188 ~~pk~~~~~~~~~~~~~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
.||+|.+++.+.+++++.+++++||||+ ..||.+ |+++|+.+|+|.+|....+++......|++++.++.|+
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~----a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEA----AKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHH----HHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHH----HHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 3699999999999999999999999999 899999 99999999999999877777765556899999999885
|
... |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-12 Score=108.80 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=66.4
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|.+.+++.+.+..+..+++++||||+. +||.+ |+++||.+++|.+|....+++......|++++.|+.++...+
T Consensus 191 P~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~----a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 191 PSPAIYEAALEKLGLDRSEVLMVGDRLDTDILG----AKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred CCHHHHHHHHHHhCCCcccEEEEcCCchhhHHH----HHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 558899999999999999999999995 89999 999999999999998878887766678999999999987654
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-11 Score=96.09 Aligned_cols=84 Identities=19% Similarity=0.325 Sum_probs=67.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC--CCCe---------EEe-------cCCCChHH
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI--PPDR---------IYG-------LGTGPKVE 193 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~--~f~~---------i~~-------~~~~pk~~ 193 (268)
....++.||++++. +++|..++++|++-+.++..+... +|+.. -+.. ..+ ++++.|++
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~ 162 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAE 162 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHH
Confidence 34678999999998 799999999999999999999999 79863 1211 111 12247899
Q ss_pred HHHHHHhcCCCCCCcEEEEecCccchhc
Q 024415 194 VLKQLQKKPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~IGDs~~Di~~ 221 (268)
++..+.+ +...+.++||||+.+|+++
T Consensus 163 ~i~~lrk--~~~~~~~~mvGDGatDlea 188 (227)
T KOG1615|consen 163 VIALLRK--NYNYKTIVMVGDGATDLEA 188 (227)
T ss_pred HHHHHHh--CCChheeEEecCCcccccc
Confidence 9999988 6666788999999999999
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.3e-11 Score=99.10 Aligned_cols=90 Identities=8% Similarity=-0.026 Sum_probs=64.6
Q ss_pred CCCCCChHHHH----HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC-----C----C------ChHHHHHHH
Q 024415 138 NRFYPGIPDAL----KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----T----G------PKVEVLKQL 198 (268)
Q Consensus 138 ~~~~pg~~e~L----~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~-----~----~------pk~~~~~~~ 198 (268)
..++||+.++| +++|++++|+||++...++..+.. +|+.. .+.+++.+ + + -|...+++.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~ 171 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERK 171 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHH
Confidence 56799999999 257999999999999999999999 78632 44455443 1 1 234444433
Q ss_pred HhcCCCCCCcEEEEecCccchhcccccccccCCeEEEee
Q 024415 199 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 199 ~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
. +.+...+.+-|||.+|+.+ -..+|- +++|+
T Consensus 172 ~---~~~~~~~~aY~Ds~~D~pm----L~~a~~-~~~vn 202 (211)
T PRK11590 172 I---GTPLRLYSGYSDSKQDNPL----LYFCQH-RWRVT 202 (211)
T ss_pred h---CCCcceEEEecCCcccHHH----HHhCCC-CEEEC
Confidence 3 3455566899999999999 888884 55554
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.9e-11 Score=92.60 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=71.4
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCc-cchhccccccc
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPE 227 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~ 227 (268)
+..|+++.|+||+...-+....++ +|+. .+....||.+..+++++++.++++++|+||||.. .|+.+ |+
T Consensus 59 k~~gi~v~vvSNn~e~RV~~~~~~-l~v~-----fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlg----gn 128 (175)
T COG2179 59 KEAGIKVVVVSNNKESRVARAAEK-LGVP-----FIYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLG----GN 128 (175)
T ss_pred HhcCCEEEEEeCCCHHHHHhhhhh-cCCc-----eeecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhc----cc
Confidence 789999999999999999999999 7874 2333446999999999999999999999999995 79999 99
Q ss_pred ccCCeEEEeec
Q 024415 228 LDGWNLYLGDW 238 (268)
Q Consensus 228 ~aG~~~v~v~~ 238 (268)
.+|+.+|.|..
T Consensus 129 r~G~~tIlV~P 139 (175)
T COG2179 129 RAGMRTILVEP 139 (175)
T ss_pred ccCcEEEEEEE
Confidence 99999999864
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.8e-12 Score=110.54 Aligned_cols=87 Identities=17% Similarity=0.135 Sum_probs=74.8
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHH---hcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRE---LAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~---~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
++||+.++| +++|+.++|+||++...+...+++ |+++..+|+.+.++ .+|||+.+..+.+++++.+++++|||
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~vfid 110 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSFLFID 110 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcEEEEC
Confidence 356666666 689999999999999999999987 33777888887665 35999999999999999999999999
Q ss_pred cCccchhcccccccccCC
Q 024415 214 DRLATLKNVIKEPELDGW 231 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~ 231 (268)
|++.|+.+ +++++-
T Consensus 111 D~~~d~~~----~~~~lp 124 (320)
T TIGR01686 111 DNPAERAN----VKITLP 124 (320)
T ss_pred CCHHHHHH----HHHHCC
Confidence 99999999 777665
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-12 Score=113.20 Aligned_cols=114 Identities=18% Similarity=0.136 Sum_probs=90.0
Q ss_pred cCCCeEEEEcCCCHHH-HHHHHHHhcCCCCCCCeEEecCC-------CChHHHHHHHHhcCCCCCCcEEEEecCc-cchh
Q 024415 150 FASSRIYIVTTKQSRF-ADALLRELAGVTIPPDRIYGLGT-------GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLK 220 (268)
Q Consensus 150 ~~g~~i~ivTn~~~~~-~~~~l~~~~gl~~~f~~i~~~~~-------~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~ 220 (268)
.++-..+|+||.+... ....+.. .|...+|+.+.+... ||+|.+++.+.++++.++++++||||+. +|+.
T Consensus 184 ~~~g~~~i~tn~d~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~ 262 (311)
T PLN02645 184 ENPGCLFIATNRDAVTHLTDAQEW-AGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDIL 262 (311)
T ss_pred cCCCCEEEEeCCCCCCCCCCCCCc-cchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHH
Confidence 3345789999988643 2233344 466666776654331 5999999999999999999999999997 8999
Q ss_pred cccccccccCCeEEEeecCCCCHHHHHhh--cCCCCEEEcCHhHHHhhcC
Q 024415 221 NVIKEPELDGWNLYLGDWGYNTQKEREEA--ASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 221 ~~~~~A~~aG~~~v~v~~g~~~~~~~~~~--~~~p~~~~~~~~~l~~~l~ 268 (268)
+ |+++|+.+++|.||++..+++... ...|++.+.++.+|.++++
T Consensus 263 ~----A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 263 F----GQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred H----HHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 9 999999999999999887777542 3579999999999988764
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.4e-10 Score=95.56 Aligned_cols=118 Identities=12% Similarity=0.146 Sum_probs=88.5
Q ss_pred HHhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHH
Q 024415 93 ILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADAL 169 (268)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~ 169 (268)
+..+|+.....++..++++.+.+... .. ....++.||+.+++ +++|++++|+|++....++.+
T Consensus 89 ~m~eWw~k~~~l~~~~~~~~e~i~~~-------v~-------~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~v 154 (277)
T TIGR01544 89 YMVEWWTKSHGLLVQQAFPKAKIKEI-------VA-------ESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEV 154 (277)
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHH-------Hh-------hcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHH
Confidence 45677777777778777776663221 11 13568999999999 699999999999999999999
Q ss_pred HHHhcCCCCCCCeEEe------cCC---C-ChH---------HHHHHHHhcCC--CCCCcEEEEecCccchhcccccccc
Q 024415 170 LRELAGVTIPPDRIYG------LGT---G-PKV---------EVLKQLQKKPE--LQGMTLHFVEDRLATLKNVIKEPEL 228 (268)
Q Consensus 170 l~~~~gl~~~f~~i~~------~~~---~-pk~---------~~~~~~~~~~~--~~~~~~l~IGDs~~Di~~~~~~A~~ 228 (268)
++. .|+...+..|++ .+. | |.| .+++.....++ ..+++||+||||.+|+.| |..
T Consensus 155 L~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~m----a~g 229 (277)
T TIGR01544 155 LRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRM----ADG 229 (277)
T ss_pred HHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhH----hcC
Confidence 999 798767766632 221 2 333 44555666666 788999999999999999 776
Q ss_pred c
Q 024415 229 D 229 (268)
Q Consensus 229 a 229 (268)
.
T Consensus 230 ~ 230 (277)
T TIGR01544 230 V 230 (277)
T ss_pred C
Confidence 6
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.2e-11 Score=107.73 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=73.4
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----C--ChHHHHHHHHhcCCCCCC
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----G--PKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~--pk~~~~~~~~~~~~~~~~ 207 (268)
..+++||+.+.| +++|++++++||+++..++..+++ +|+ ||.+++++. + ||++.+. +.++ .+
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~ 140 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ER 140 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--cc
Confidence 346889999999 699999999999999999999999 787 899998874 2 3455444 2222 24
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCC
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYN 241 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~ 241 (268)
+++|+|||.+|+.+ ++.+| ++++|+.+..
T Consensus 141 ~~~yvGDS~~Dlp~----~~~A~-~av~Vn~~~~ 169 (479)
T PRK08238 141 GFDYAGNSAADLPV----WAAAR-RAIVVGASPG 169 (479)
T ss_pred CeeEecCCHHHHHH----HHhCC-CeEEECCCHH
Confidence 57999999999999 99999 7888876643
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=112.57 Aligned_cols=85 Identities=24% Similarity=0.392 Sum_probs=70.6
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCH------------HHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHh
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQS------------RFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQK 200 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~------------~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~ 200 (268)
++||+.+.| +++||+++|+||... ..+..+++. +|+ .|+.+++.+. ||+|.++..+.+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgi--pfdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGV--PFQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCC--ceEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 578999988 699999999999776 457778888 687 4888887754 599999999998
Q ss_pred cCC----CCCCcEEEEecCccchhcccccccccCC
Q 024415 201 KPE----LQGMTLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 201 ~~~----~~~~~~l~IGDs~~Di~~~~~~A~~aG~ 231 (268)
+++ +.+++++||||+..|+++ |+++|-
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~----g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPAN----GKAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHH----HHhcCC
Confidence 874 889999999999999887 666654
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-11 Score=96.40 Aligned_cols=91 Identities=12% Similarity=-0.037 Sum_probs=76.9
Q ss_pred cCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCC-CCCeEEecCCC--ChHHHHHHHHhcCCCCCCcEEE
Q 024415 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTG--PKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 137 ~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~-~f~~i~~~~~~--pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
...++||+.++|+ +++++++|+||+....++..+++ +++.. +|+.|+++++. .||. +.+..++++..|++|++
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 4468999999992 46799999999999999999999 79864 56999988763 4555 66667788999999999
Q ss_pred EecCccchhcccccccccCCeE
Q 024415 212 VEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~ 233 (268)
|||+..|+.+ |+++|+..
T Consensus 121 i~Ds~~~~~a----a~~ngI~i 138 (148)
T smart00577 121 IDDSPDSWPF----HPENLIPI 138 (148)
T ss_pred EECCHHHhhc----CccCEEEe
Confidence 9999999999 99999844
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-09 Score=88.53 Aligned_cols=111 Identities=12% Similarity=0.054 Sum_probs=72.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH----HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEE
Q 024415 109 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL----KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 184 (268)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L----~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~ 184 (268)
|.+.+++.+....+.+.+. ....++||+.++| +++|++++||||++...++.+.+. .++..- +.++
T Consensus 72 g~~~~~l~~~~~~f~~~~~--------~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~i 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFR--------DKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNLI 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHH--------HhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcEE
Confidence 5555555554444444442 2346899999999 247999999999999999999987 565332 3333
Q ss_pred ecC----C-----C------ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEee
Q 024415 185 GLG----T-----G------PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 185 ~~~----~-----~------pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
+.+ . + -|...+++.. +.....+.+-|||.+|+.+ -..+|- +++|+
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pm----L~~a~~-~~~Vn 201 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPL----LAFCEH-RWRVS 201 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHh---CCChhheEEecCCcccHHH----HHhCCC-cEEEC
Confidence 332 1 1 2344444333 3344566899999999999 888885 44453
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.6e-11 Score=92.58 Aligned_cols=106 Identities=20% Similarity=0.273 Sum_probs=73.2
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEc-CCCHHHHHHHHHHhcCCC----------CCCCeEEecCCCChHHHHHHHHhc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVT-TKQSRFADALLRELAGVT----------IPPDRIYGLGTGPKVEVLKQLQKK 201 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivT-n~~~~~~~~~l~~~~gl~----------~~f~~i~~~~~~pk~~~~~~~~~~ 201 (268)
....+||++.++| +.+|++++++| +...+.++.+|+. +++. .+|+.. .--.++|..-++.+.++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~-eI~~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYL-EIYPGSKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEE-EESSS-HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchh-heecCchHHHHHHHHHh
Confidence 3457999999999 68999999999 5667789999999 7998 777662 22234899999999999
Q ss_pred CCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 202 PELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 202 ~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
.++..++++|++|...++.. ....|+.++.+-.|- +.+.+++
T Consensus 120 tgI~y~eMlFFDDe~~N~~~----v~~lGV~~v~v~~Gl-t~~~~~~ 161 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEV----VSKLGVTCVLVPDGL-TWDEFER 161 (169)
T ss_dssp H---GGGEEEEES-HHHHHH----HHTTT-EEEE-SSS---HHHHHH
T ss_pred cCCChhHEEEecCchhccee----eEecCcEEEEeCCCC-CHHHHHH
Confidence 99999999999999999999 788999999998874 5555543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.6e-10 Score=88.27 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhc---CCCCCCCeEEecCCC
Q 024415 116 VDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELA---GVTIPPDRIYGLGTG 189 (268)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~---gl~~~f~~i~~~~~~ 189 (268)
...++.++-..++...+.-.-..++||++.+.| ++.|.+++|.|+++-..++..... . .|..+|+..+....|
T Consensus 80 ~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fgh-s~agdL~~lfsGyfDttiG 158 (229)
T COG4229 80 DTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGH-SDAGDLNSLFSGYFDTTIG 158 (229)
T ss_pred cchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcc-cccccHHhhhcceeecccc
Confidence 344566666676666555455568999999999 699999999999988777666553 2 344566666655555
Q ss_pred Ch--HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 190 PK--VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 190 pk--~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
+| ..-+.++....|++|.+++|+.|.+..+.+ |+.+|+.++++.+.
T Consensus 159 ~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~A----A~~vGl~t~l~~R~ 206 (229)
T COG4229 159 KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKA----AAGVGLATGLAVRP 206 (229)
T ss_pred ccccchhHHHHHHhcCCCchheEEecCCHHHHHH----HHhcchheeeeecC
Confidence 55 456788889999999999999999999999 99999999988765
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-10 Score=98.39 Aligned_cols=100 Identities=19% Similarity=0.195 Sum_probs=83.8
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcC-------CCCCCCeEEecCCCCh-------------
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG-------VTIPPDRIYGLGTGPK------------- 191 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~g-------l~~~f~~i~~~~~~pk------------- 191 (268)
.......||+.++| +++|++++|+||++...++..++.++| +..+||.|+++..||.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence 44456799999999 689999999999999999999999337 8899999999886552
Q ss_pred ---------H-----------HHHHHHHhcCCCCCCcEEEEecCc-cchhccccccc-ccCCeEEEeec
Q 024415 192 ---------V-----------EVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPE-LDGWNLYLGDW 238 (268)
Q Consensus 192 ---------~-----------~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~-~aG~~~v~v~~ 238 (268)
. --+..+.+..+..+++++||||+. .|+.+ |+ .+||.+++|..
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~----~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLR----SKKKRGWRTAAIIP 324 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHh----hHHhcCcEEEEEch
Confidence 0 123666777788999999999995 79999 88 99999999975
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.6e-11 Score=88.94 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=69.2
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
..|...|++++|+|+.....++...+. +|+...|..+ ..|..+++.+..++++++++|.||||...|+..
T Consensus 45 k~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~qG~-----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpv---- 114 (170)
T COG1778 45 KLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQGI-----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPV---- 114 (170)
T ss_pred HHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeeech-----HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHH----
Confidence 344688999999999999999999999 8997655321 268999999999999999999999999999999
Q ss_pred ccccCCeEE
Q 024415 226 PELDGWNLY 234 (268)
Q Consensus 226 A~~aG~~~v 234 (268)
.+++|.+++
T Consensus 115 m~~vGls~a 123 (170)
T COG1778 115 MEKVGLSVA 123 (170)
T ss_pred HHHcCCccc
Confidence 999998665
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.2e-09 Score=90.52 Aligned_cols=109 Identities=13% Similarity=0.069 Sum_probs=69.1
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCC-----HHHHHHHHHHhcCCCC---CCCeEEec-CCCChHHHHHHHHhcCCCCCC
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQ-----SRFADALLRELAGVTI---PPDRIYGL-GTGPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~-----~~~~~~~l~~~~gl~~---~f~~i~~~-~~~pk~~~~~~~~~~~~~~~~ 207 (268)
.++++.+++ +..+..+.++|+.+ ....+...+. +++.. .+..+-.. ....|+.+++.+++.++++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 345555554 45566666777644 2233344444 45431 11222111 122789999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCH
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 260 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~ 260 (268)
++++|||+.+|+.+ ++.+|+ .+.+| +..++++. .+++++.+-
T Consensus 217 e~i~~GD~~NDi~m----~~~ag~---~vamg-na~~~lk~---~Ad~v~~~n 258 (272)
T PRK10530 217 NVVAFGDNFNDISM----LEAAGL---GVAMG-NADDAVKA---RADLVIGDN 258 (272)
T ss_pred HeEEeCCChhhHHH----HHhcCc---eEEec-CchHHHHH---hCCEEEecC
Confidence 99999999999999 999997 33445 34456654 466776553
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=86.35 Aligned_cols=117 Identities=24% Similarity=0.247 Sum_probs=87.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCC---------------HHHHHHHHHHhcCCCCCCCeEEec---------CCCCh
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRIYGL---------GTGPK 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~---------------~~~~~~~l~~~~gl~~~f~~i~~~---------~~~pk 191 (268)
.+.||+.+.| ++.||+++++||.+ .......++. .|+ .|+.|+.. +.||+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP~ 107 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKPK 107 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCCC
Confidence 3779999988 69999999999932 2234445555 465 46666532 23699
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHh
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 265 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~ 265 (268)
+.+++.+++++++++.+.++|||+.+|+++ |.++|+..+.+.+|......... ..+..+.++.++..
T Consensus 108 ~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~----a~n~gi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 174 (181)
T COG0241 108 PGMLLSALKEYNIDLSRSYVVGDRLTDLQA----AENAGIKGVLVLTGIGVTTDGAG---RAKWVFDSLAEFAN 174 (181)
T ss_pred hHHHHHHHHHhCCCccceEEecCcHHHHHH----HHHCCCCceEEEcCccccccccc---ccccccccHHHHHH
Confidence 999999999999999999999999999999 99999999988887544322211 23467777777663
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.2e-09 Score=88.31 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=65.2
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHH---HHHHHHHHhcCCCCC-CCeEEecCC-CChHHHHHHHHhcCCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTIP-PDRIYGLGT-GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~---~~~~~l~~~~gl~~~-f~~i~~~~~-~pk~~~~~~~~~~~~~~~~ 207 (268)
...+++||+.++| +++|++++++||++.. .+...|+. +|+..+ ++.++..+. .+|+...+.+.+.+++.
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Iv-- 191 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIV-- 191 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEE--
Confidence 4557899999999 5999999999998744 45577888 799754 466776654 38888888888888885
Q ss_pred cEEEEecCccchhc
Q 024415 208 TLHFVEDRLATLKN 221 (268)
Q Consensus 208 ~~l~IGDs~~Di~~ 221 (268)
++|||...|+..
T Consensus 192 --l~vGD~~~Df~~ 203 (266)
T TIGR01533 192 --LLFGDNLLDFDD 203 (266)
T ss_pred --EEECCCHHHhhh
Confidence 999999999976
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.2e-09 Score=84.22 Aligned_cols=106 Identities=22% Similarity=0.244 Sum_probs=80.4
Q ss_pred hccCCCCCChHHHH---HcCC-CeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC---------------------
Q 024415 135 IGANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--------------------- 189 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g-~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~--------------------- 189 (268)
....|..||+.+++ ++.| +.+.|||.+..-+++..|++ +|+.+.|..|++....
T Consensus 80 ~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 80 LRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred HhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 35678999999999 3555 58999999999999999999 8999999988875421
Q ss_pred C----hHHHHHHHH---hcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHH
Q 024415 190 P----KVEVLKQLQ---KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 244 (268)
Q Consensus 190 p----k~~~~~~~~---~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~ 244 (268)
| |...+..+. .+-++..++++||||+.+|+-++ -+-.+.+++....||-.+.
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~---l~Lr~~D~ampRkgfpl~k 217 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPV---LRLRACDVAMPRKGFPLWK 217 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcc---hhcccCceecccCCCchHh
Confidence 1 223333332 34577788999999999999996 3346677777788876554
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.2e-09 Score=82.86 Aligned_cols=76 Identities=18% Similarity=0.314 Sum_probs=59.3
Q ss_pred CChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-------------CC----hHHHHHHH---
Q 024415 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-------------GP----KVEVLKQL--- 198 (268)
Q Consensus 142 pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-------------~p----k~~~~~~~--- 198 (268)
|++.++| +++|++++|+|+++...++.+++. +|+...+ +++.+. ++ |...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 4444999 689999999999999999999998 7886422 222110 12 89999999
Q ss_pred HhcCCCCCCcEEEEecCccchhc
Q 024415 199 QKKPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 199 ~~~~~~~~~~~l~IGDs~~Di~~ 221 (268)
... +.....+++||||.+|+.+
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~ 190 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPM 190 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHH
Confidence 555 7788889999999999988
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.4e-09 Score=100.31 Aligned_cols=111 Identities=20% Similarity=0.265 Sum_probs=87.0
Q ss_pred CCCCCChHHHH---HcCC-CeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g-~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
.+++||+.++| +++| ++++++||.+...++..+++ +|+..+|..+. ..+|+++++++... +.+++|||
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~v~~l~~~----~~~v~~vG 454 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELL---PEDKLAIVKELQEE----GGVVAMVG 454 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCC---HHHHHHHHHHHHHc----CCEEEEEE
Confidence 47999999999 6899 99999999999999999999 89977765431 12678888888764 45789999
Q ss_pred cCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhhc
Q 024415 214 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 267 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~l 267 (268)
|+.+|+.+ ++++| +++.+|.... ... ..+|+++. ++..+.+++
T Consensus 455 Dg~nD~~a----l~~A~---vgia~g~~~~-~~~---~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 455 DGINDAPA----LAAAD---VGIAMGAGSD-VAI---EAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred CChhHHHH----HhhCC---EeEEeCCCCH-HHH---HhCCEEEeCCCHHHHHHHH
Confidence 99999999 99999 5667773322 222 24778887 688777664
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.1e-09 Score=99.08 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=89.8
Q ss_pred cCCCCCChHHHH---HcCCC-eEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEE
Q 024415 137 ANRFYPGIPDAL---KFASS-RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~-~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
..+++||+.++| +++|+ +++++||.+...++..+++ +|+..+|..+. ..+|++.++++..+. ++++||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l~~~~----~~v~~v 431 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKELREKY----GPVAMV 431 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHHHhcC----CEEEEE
Confidence 347899999999 69999 9999999999999999999 89987775332 126788888887665 577999
Q ss_pred ecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhc
Q 024415 213 EDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 267 (268)
Q Consensus 213 GDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l 267 (268)
||+.+|+.+ ++++|+ .+.+|++..+.... .+|+++ +++.++.+++
T Consensus 432 GDg~nD~~a----l~~A~v---gia~g~~~~~~~~~---~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 432 GDGINDAPA----LAAADV---GIAMGASGSDVAIE---TADVVLLNDDLSRLPQAI 478 (536)
T ss_pred eCCHHHHHH----HHhCCE---EEEeCCCccHHHHH---hCCEEEECCCHHHHHHHH
Confidence 999999999 999995 66777533333332 477888 8999988765
|
. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.7e-08 Score=77.43 Aligned_cols=114 Identities=12% Similarity=0.196 Sum_probs=75.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe--EEecC----------------C--C-C
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR--IYGLG----------------T--G-P 190 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~--i~~~~----------------~--~-p 190 (268)
.+...+.||.++++ +.++++++|+|++-...+..+++.+ +-....+. |++.+ + | .
T Consensus 69 lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~i-vgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~d 147 (220)
T COG4359 69 LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGI-VGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHD 147 (220)
T ss_pred HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhh-ccccceeeeEEeecCceEcCCCceeeecCCccccCCC
Confidence 44567899999999 7999999999999999999999984 42222221 22211 1 1 4
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh---hcCCCCEEEcCHhHHHh
Q 024415 191 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE---AASIPRIQLLQLSDFSR 265 (268)
Q Consensus 191 k~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~---~~~~p~~~~~~~~~l~~ 265 (268)
|+..+..+.+. ++.++|+|||++|+.+ |+....-+. +..|.. .+-.|...+..+.|+..
T Consensus 148 K~~vI~~l~e~----~e~~fy~GDsvsDlsa----aklsDllFA--------K~~L~nyc~eqn~~f~~fe~F~eIlk 209 (220)
T COG4359 148 KSSVIHELSEP----NESIFYCGDSVSDLSA----AKLSDLLFA--------KDDLLNYCREQNLNFLEFETFYEILK 209 (220)
T ss_pred cchhHHHhhcC----CceEEEecCCcccccH----hhhhhhHhh--------HHHHHHHHHHcCCCCcccccHHHHHH
Confidence 46666655544 5557999999999999 887765111 112221 11356677788777654
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-08 Score=94.02 Aligned_cols=109 Identities=18% Similarity=0.221 Sum_probs=84.2
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
.+++||+.++| +++|++++++||.+...++..++. +|++ +++... .+|++.++.+..+ +++|+|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~~----~~~v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQEK----GRVVAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHHc----CCEEEEEe
Confidence 46899999988 689999999999999999999999 7995 333222 3778888888763 56789999
Q ss_pred cCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhc
Q 024415 214 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 267 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l 267 (268)
|+.+|+.+ ++++|+ .+.+|++.. ... ..+|+++ +++.++.+++
T Consensus 474 Dg~nD~~a----l~~A~v---gia~g~g~~--~a~--~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 474 DGINDAPA----LAQADV---GIAIGAGTD--VAI--EAADVVLMRNDLNDVATAI 518 (562)
T ss_pred CCCccHHH----HhhCCE---EEEeCCcCH--HHH--hhCCEEEeCCCHHHHHHHH
Confidence 99999999 999996 456665432 222 2477888 4888877664
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.1e-10 Score=93.99 Aligned_cols=92 Identities=11% Similarity=0.013 Sum_probs=73.7
Q ss_pred CCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeE--EecCC----CChHHHHHHHHhcCCCC-CCcEE
Q 024415 141 YPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRI--YGLGT----GPKVEVLKQLQKKPELQ-GMTLH 210 (268)
Q Consensus 141 ~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i--~~~~~----~pk~~~~~~~~~~~~~~-~~~~l 210 (268)
+|++.+++ +++|+++ |+||.+.......+.. .|...+|..+ .+.+. ||+|++++.+.++++.. +++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 67888877 4679997 8899988777666666 6766666654 44432 59999999999999875 57899
Q ss_pred EEecC-ccchhcccccccccCCeEEEeec
Q 024415 211 FVEDR-LATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 211 ~IGDs-~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
||||+ .+|+.+ |+++|+.+++|.+
T Consensus 218 ~vGD~~~~Di~~----a~~~G~~~i~v~t 242 (242)
T TIGR01459 218 MVGDSFYTDILG----ANRLGIDTALVLT 242 (242)
T ss_pred EECCCcHHHHHH----HHHCCCeEEEEeC
Confidence 99999 599999 9999999999864
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.5e-09 Score=81.85 Aligned_cols=87 Identities=22% Similarity=0.230 Sum_probs=57.8
Q ss_pred CCChHHHH---HcCCCeEEEEcCC---CH-----------HHHHHHHHHhcCCCCCCCeEEecC----CCChHHHHHHHH
Q 024415 141 YPGIPDAL---KFASSRIYIVTTK---QS-----------RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQ 199 (268)
Q Consensus 141 ~pg~~e~L---~~~g~~i~ivTn~---~~-----------~~~~~~l~~~~gl~~~f~~i~~~~----~~pk~~~~~~~~ 199 (268)
.|++.+.| ++.||.|+|+||. .. ..+..+++. +++. +...++.. +||++-+++.+.
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHHH
Confidence 35677777 5999999999985 11 234445666 4553 33333322 269999999999
Q ss_pred hcCCC----CCCcEEEEecC-----------ccchhcccccccccCCeEE
Q 024415 200 KKPEL----QGMTLHFVEDR-----------LATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 200 ~~~~~----~~~~~l~IGDs-----------~~Di~~~~~~A~~aG~~~v 234 (268)
.+++. +.++++||||. -+|.+. |.++|+.+.
T Consensus 108 ~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~f----A~N~gi~f~ 153 (159)
T PF08645_consen 108 KDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKF----ALNCGIKFY 153 (159)
T ss_dssp CCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHH----HHHHT--EE
T ss_pred HhccccccccccceEEEeccCCCCCcccccChhHHHH----HHHcCCccc
Confidence 98875 88899999996 478999 999999654
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.5e-09 Score=89.29 Aligned_cols=83 Identities=13% Similarity=-0.011 Sum_probs=58.6
Q ss_pred HcCCCeEEEE---cCCCHHHHHHHHHHhcCCC----CCCCeEEecCCCChHHHHHHHHhcCCCCC-CcEEEEecCccchh
Q 024415 149 KFASSRIYIV---TTKQSRFADALLRELAGVT----IPPDRIYGLGTGPKVEVLKQLQKKPELQG-MTLHFVEDRLATLK 220 (268)
Q Consensus 149 ~~~g~~i~iv---Tn~~~~~~~~~l~~~~gl~----~~f~~i~~~~~~pk~~~~~~~~~~~~~~~-~~~l~IGDs~~Di~ 220 (268)
+..++...++ |+.....+...++. .++. .++..|+... .|..+++++.+.+++++ +++++|||+.+|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~ 221 (273)
T PRK00192 145 KDREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLP 221 (273)
T ss_pred HhcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHH
Confidence 3445554444 44444555566666 5664 3333444443 78999999999999999 99999999999999
Q ss_pred cccccccccCCeEEEeecC
Q 024415 221 NVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 221 ~~~~~A~~aG~~~v~v~~g 239 (268)
+ ++.+|..++ +.++
T Consensus 222 m----~~~ag~~va-m~NA 235 (273)
T PRK00192 222 M----LEAADIAVV-VPGP 235 (273)
T ss_pred H----HHhCCeeEE-eCCC
Confidence 9 999997554 4444
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.3e-08 Score=80.45 Aligned_cols=92 Identities=20% Similarity=0.166 Sum_probs=62.5
Q ss_pred eEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEec---C---CC-ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccc
Q 024415 154 RIYIVTTKQSRFADALLRELAGVTIPPDRIYGL---G---TG-PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 154 ~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~---~---~~-pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A 226 (268)
.+.+.++.........++. ++.. +..+.+. + .+ +|+.+++.+++.++++++++++|||+.+|+.+ +
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m----~ 189 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEM----F 189 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHH----H
Confidence 3455566666667777777 5531 2222111 1 12 78999999999999999999999999999999 9
Q ss_pred cccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 227 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 227 ~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
+.+|+.+ ++. |..++.++. .+++..+
T Consensus 190 ~~ag~~v-am~---Na~~~vk~~---a~~v~~~ 215 (230)
T PRK01158 190 EVAGFGV-AVA---NADEELKEA---ADYVTEK 215 (230)
T ss_pred HhcCceE-Eec---CccHHHHHh---cceEecC
Confidence 9999854 444 334455552 3455544
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.3e-08 Score=75.87 Aligned_cols=78 Identities=22% Similarity=0.212 Sum_probs=56.5
Q ss_pred eEEEEcCCC-------HHHHHHHHHHhcCCCCCCCeEEecCCCC--hHHHHHHHHhc-CCCCCCcEEEEecCc-cchhcc
Q 024415 154 RIYIVTTKQ-------SRFADALLRELAGVTIPPDRIYGLGTGP--KVEVLKQLQKK-PELQGMTLHFVEDRL-ATLKNV 222 (268)
Q Consensus 154 ~i~ivTn~~-------~~~~~~~l~~~~gl~~~f~~i~~~~~~p--k~~~~~~~~~~-~~~~~~~~l~IGDs~-~Di~~~ 222 (268)
++.|+||+. ...++.+-+. +|+. .+.....|| ..++++++... ....|+++++|||.. .|+.+
T Consensus 79 ~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~- 152 (168)
T PF09419_consen 79 RVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM- 152 (168)
T ss_pred eEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH-
Confidence 699999983 5666677777 6753 222333344 34566666554 234699999999996 89999
Q ss_pred cccccccCCeEEEeecCC
Q 024415 223 IKEPELDGWNLYLGDWGY 240 (268)
Q Consensus 223 ~~~A~~aG~~~v~v~~g~ 240 (268)
|...|+-+||+..|.
T Consensus 153 ---gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 153 ---GNRMGSYTILVTDGV 167 (168)
T ss_pred ---hhccCceEEEEecCc
Confidence 999999999998773
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.68 E-value=6e-08 Score=81.96 Aligned_cols=39 Identities=13% Similarity=0.014 Sum_probs=36.6
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT 188 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~ 188 (268)
+++|++++|+||+.+..+...++. +|+..+|+.|++++.
T Consensus 159 kekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~Gd 197 (301)
T TIGR01684 159 KKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGGH 197 (301)
T ss_pred HHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECCc
Confidence 799999999999999999999999 899999999998875
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=7.8e-08 Score=94.31 Aligned_cols=113 Identities=19% Similarity=0.171 Sum_probs=86.8
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
.+++||+.+.| ++.|++++++|+.....++..++. +|+..+|..+ ...+|.++++.+..+ +++++||||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~~i~~l~~~----~~~v~~vGD 720 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAEAIKRLQSQ----GRQVAMVGD 720 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHHHHHHHhhc----CCEEEEEeC
Confidence 37899999998 689999999999999999999999 7996543321 112577788877654 567899999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+.+|+.+ ++.+|+ ++.+|.++....+. +.+.+..+++.++.+++
T Consensus 721 g~nD~~a----l~~Agv---gia~g~g~~~a~~~--ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 721 GINDAPA----LAQADV---GIAMGGGSDVAIET--AAITLMRHSLMGVADAL 764 (834)
T ss_pred CHHHHHH----HHhCCe---eEEecCCCHHHHHh--CCEEEecCCHHHHHHHH
Confidence 9999999 999999 55566555544443 45556778888887765
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.1e-07 Score=73.54 Aligned_cols=105 Identities=17% Similarity=0.142 Sum_probs=64.1
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCH-------HHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQS-------RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQ 205 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~-------~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~ 205 (268)
...++.||+.++| .+.|+.+.+||+.+. ......+++.+|...+-+.+++ ..|. ..+..
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~-~~K~----------~v~~D 138 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFT-GDKT----------LVGGD 138 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEE-SSGG----------GC--S
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEe-cCCC----------eEecc
Confidence 4568999999999 478877777776543 2444556653453222234444 3321 12334
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
++|+|++..+.. +.+.|+.++++.++||.... .-..+.+.+|+.++
T Consensus 139 ----vlIDD~~~n~~~----~~~~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 139 ----VLIDDRPHNLEQ----FANAGIPVILFDQPYNRDES-------NFPRVNNWEEIEDL 184 (191)
T ss_dssp ----EEEESSSHHHSS-----SSESSEEEEE--GGGTT---------TSEEE-STTSHHHH
T ss_pred ----EEecCChHHHHh----ccCCCceEEEEcCCCCCCCC-------CCccCCCHHHHHHH
Confidence 999999999999 99999999999998875422 33788999987664
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-07 Score=75.95 Aligned_cols=94 Identities=18% Similarity=0.210 Sum_probs=74.3
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCH---------------HHHHHHHHHhcCCCCCCCeEEecC--------------
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGLG-------------- 187 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~---------------~~~~~~l~~~~gl~~~f~~i~~~~-------------- 187 (268)
+.|.+..++ ++.|++++|||-++. ++++..|+. .+.+...+.+++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 445566655 589999999996655 368888887 55554445555421
Q ss_pred -CCChHHH--H--HHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeec
Q 024415 188 -TGPKVEV--L--KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 188 -~~pk~~~--~--~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
.+|+|++ + ++++++.++.|++++||+|+..++++ |++.|+.++.+..
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVea----A~~lGi~ai~f~~ 206 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKN----ALKEGYIALHVTG 206 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHH----HHHCCCEEEEcCC
Confidence 1488888 8 99999999999999999999999999 9999999999863
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.8e-07 Score=78.50 Aligned_cols=83 Identities=18% Similarity=0.318 Sum_probs=67.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHH--HHHHHhcCCCC-CCCeEEecCCCChHHHHHHHHhcCCCCCCcEE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFAD--ALLRELAGVTI-PPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~--~~l~~~~gl~~-~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l 210 (268)
...++||+.++| +++|++++++||+++.... ..+++ +|+.. +|+.|++++... .+.+.....+.+..+.+++
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~~ 99 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGIIY 99 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceEE
Confidence 346899999999 6899999999999887665 77899 79987 899999987532 2456666667778889999
Q ss_pred EEecCccchhc
Q 024415 211 FVEDRLATLKN 221 (268)
Q Consensus 211 ~IGDs~~Di~~ 221 (268)
+|||+..|+..
T Consensus 100 ~vGd~~~d~~~ 110 (242)
T TIGR01459 100 LLGHLENDIIN 110 (242)
T ss_pred EeCCcccchhh
Confidence 99999888876
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.9e-07 Score=77.95 Aligned_cols=39 Identities=15% Similarity=-0.011 Sum_probs=36.3
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT 188 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~ 188 (268)
+++|++++|+||+++..+...++. +|+..+|+.|++++.
T Consensus 161 kekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g~ 199 (303)
T PHA03398 161 KERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGGR 199 (303)
T ss_pred HHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECCC
Confidence 799999999999999999999999 899999999988764
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.52 E-value=5e-07 Score=78.68 Aligned_cols=86 Identities=15% Similarity=0.252 Sum_probs=59.9
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCC---HHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~---~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
++||+.++| +++|++++++||++ .......++. +|+...++.|+++.. ....+.+..+....+.+||+
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~~-----~~~~~l~~~~~~~~~~V~vi 118 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSSF-----AAAAYLKSINFPKDKKVYVI 118 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehHH-----HHHHHHHhhccCCCCEEEEE
Confidence 456666666 68999999999987 4444455677 799877888877653 33333333333333448898
Q ss_pred cCccchhcccccccccCCeEEE
Q 024415 214 DRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~ 235 (268)
++..+... ++.+|+.++.
T Consensus 119 G~~~~~~~----l~~~Gi~~~~ 136 (311)
T PLN02645 119 GEEGILEE----LELAGFQYLG 136 (311)
T ss_pred cCHHHHHH----HHHCCCEEec
Confidence 88888888 8999987654
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.2e-07 Score=74.59 Aligned_cols=95 Identities=8% Similarity=-0.108 Sum_probs=75.0
Q ss_pred cCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCC-CCCeEEecCCC--ChHHHHHHHHhcCCCCCCcEEE
Q 024415 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTG--PKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 137 ~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~-~f~~i~~~~~~--pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
.+..+||+.++|+ ++.+.++|.|++.+.+++.+++. ++... +|+.+++.+.. .++. +.+-+...+.+++++|+
T Consensus 40 ~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIi 117 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVII 117 (162)
T ss_pred EEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEE
Confidence 3468899999992 44499999999999999999999 68765 88888887763 2222 33333446778899999
Q ss_pred EecCccchhcccccccccCCeEEEee
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
|||++.++.+ +..+|+.+....
T Consensus 118 VDD~~~~~~~----~~~NgI~i~~f~ 139 (162)
T TIGR02251 118 IDNSPYSYSL----QPDNAIPIKSWF 139 (162)
T ss_pred EeCChhhhcc----CccCEeecCCCC
Confidence 9999999999 999998777655
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.1e-06 Score=86.81 Aligned_cols=114 Identities=17% Similarity=0.203 Sum_probs=85.6
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEec-----------------------CCC-Ch
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-----------------------GTG-PK 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~-----------------------~~~-pk 191 (268)
+++||+.+++ ++.|+++.++|+.....+....+. .|+...++.++++ ... .|
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 7899999999 799999999999999999999999 8997666544332 221 35
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhc
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 267 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l 267 (268)
..+++.+... .+.+.||||+.+|..+ .+.|++ ++.+|.+..+.-+ ..+|+++ +++..+.+.+
T Consensus 607 ~~iv~~lq~~----g~~v~mvGDGvND~pA----l~~AdV---Gia~g~~g~~va~---~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 607 MKIVKALQKR----GDVVAMTGDGVNDAPA----LKLADI---GVAMGQTGTDVAK---EAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHC----CCEEEEECCCcccHHH----HHhCCe---eEecCCCcCHHHH---HhcCEEEcCCCHHHHHHHH
Confidence 5566666654 3667999999999999 999995 6666643332322 2478999 5588887654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.4e-07 Score=76.95 Aligned_cols=75 Identities=23% Similarity=0.192 Sum_probs=65.5
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhh----cCCCCEEEcCHhHH
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA----ASIPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~----~~~p~~~~~~~~~l 263 (268)
||.+.+++.+.++.++.|++++||||+. +||.. ++++|+.++++.+|-++.++.+.. ...|||.+.++.++
T Consensus 224 KP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlF----G~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 224 KPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILF----GKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcccchhhhhH----hhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 4889999999999999999999999995 79999 999999999999998777766553 23599999999988
Q ss_pred Hhhc
Q 024415 264 SRKL 267 (268)
Q Consensus 264 ~~~l 267 (268)
..++
T Consensus 300 ~~~~ 303 (306)
T KOG2882|consen 300 LPLL 303 (306)
T ss_pred hhhc
Confidence 7664
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.1e-07 Score=79.54 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=56.5
Q ss_pred CChHHHHHHHHhcC--------C-----CCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCC
Q 024415 189 GPKVEVLKQLQKKP--------E-----LQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPR 254 (268)
Q Consensus 189 ~pk~~~~~~~~~~~--------~-----~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~ 254 (268)
||++.+++.+...+ + ..+++++||||+. +||.+ |+++||.+++|.+|-...++. .....|+
T Consensus 233 KP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~g----a~~~G~~silV~tG~~~~~~~-~~~~~p~ 307 (321)
T TIGR01456 233 KPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIG----AQNYGWFSCLVKTGVYNGGDD-LKECKPT 307 (321)
T ss_pred CCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhh----HHhCCceEEEecccccCCCCC-CCCCCCC
Confidence 48888887755544 2 2457999999996 89999 999999999999984333231 1224699
Q ss_pred EEEcCHhHHHhhc
Q 024415 255 IQLLQLSDFSRKL 267 (268)
Q Consensus 255 ~~~~~~~~l~~~l 267 (268)
+++.++.|+...|
T Consensus 308 ~vv~~l~e~~~~i 320 (321)
T TIGR01456 308 LIVNDVFDAVTKI 320 (321)
T ss_pred EEECCHHHHHHHh
Confidence 9999999988764
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.4e-06 Score=64.22 Aligned_cols=85 Identities=13% Similarity=0.141 Sum_probs=65.1
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHH----HHHHh--cCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVL----KQLQK--KPELQG 206 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~----~~~~~--~~~~~~ 206 (268)
....++|.+.+++ +..|+-++.+|=+....+-+.|.. +++..+|+.++.....-|-.++ +.+.. ...++|
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP 116 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKP 116 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCc
Confidence 3457999999999 799999999998888888899999 8999999988766543333333 33332 355799
Q ss_pred CcEEEEecCccchhc
Q 024415 207 MTLHFVEDRLATLKN 221 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~ 221 (268)
.+++|++|..--+..
T Consensus 117 ~~Ivy~DDR~iH~~~ 131 (164)
T COG4996 117 SEIVYLDDRRIHFGN 131 (164)
T ss_pred ceEEEEecccccHHH
Confidence 999999999754444
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.7e-06 Score=80.68 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=81.1
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
+++||+.+.| +++|++++++|+.....+..+.+. +|+..++. .. .-|+.+++.+.+. ..++||||
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~-----~~p~~K~~~v~~l~~~-----~~v~mvGD 636 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG-----LLPEDKVKAVTELNQH-----APLAMVGD 636 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC-----CCHHHHHHHHHHHhcC-----CCEEEEEC
Confidence 7999999999 689999999999999999999999 89963222 11 1478888888742 46899999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+.+|..+ .+.++ |++..|.++....+. +...+..+++..|..++
T Consensus 637 giNDapA----l~~A~---vgia~g~~~~~a~~~--adivl~~~~l~~l~~~i 680 (741)
T PRK11033 637 GINDAPA----MKAAS---IGIAMGSGTDVALET--ADAALTHNRLRGLAQMI 680 (741)
T ss_pred CHHhHHH----HHhCC---eeEEecCCCHHHHHh--CCEEEecCCHHHHHHHH
Confidence 9999999 99998 455556554434333 33334446788777654
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=8.8e-07 Score=70.48 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=63.4
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
||.|..|+..+...+..|++++||||.. .|+.+ |.++||..|.|.+|...+.+.......||..++++.|-.+++
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgG----Aq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I 256 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGG----AQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI 256 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhh----HhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence 4899999999999999999999999996 59999 999999999999996555455555567899999998866553
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.5e-05 Score=65.77 Aligned_cols=81 Identities=20% Similarity=0.134 Sum_probs=59.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHH---HHHHHHHhcCCCCCCCeEEecC--CC-C-----hHHHHHHHHh
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGLG--TG-P-----KVEVLKQLQK 200 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~---~~~~l~~~~gl~~~f~~i~~~~--~~-p-----k~~~~~~~~~ 200 (268)
....+..|++.+++ +++|++++++||.+... +..-|.. .|+..+ +.++-.. .. + |.+..+++..
T Consensus 116 ~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~ 193 (229)
T TIGR01675 116 KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLME 193 (229)
T ss_pred cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHh
Confidence 34568899999999 59999999999998766 6667777 688765 5544432 22 2 5566656654
Q ss_pred -cCCCCCCcEEEEecCccchhc
Q 024415 201 -KPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 201 -~~~~~~~~~l~IGDs~~Di~~ 221 (268)
.+.+- ..|||..+|+.+
T Consensus 194 ~GYrIv----~~iGDq~sDl~G 211 (229)
T TIGR01675 194 EGYRIW----GNIGDQWSDLLG 211 (229)
T ss_pred CCceEE----EEECCChHHhcC
Confidence 36666 899999999977
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.3e-06 Score=70.00 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=41.3
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
.|..+++.+.+.+++.+++++.|||+.+|+.+ -+.+|.. |++.+ ..++.+.
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~M----l~~ag~g-vam~N---a~~~~k~ 239 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEM----LEVAGLG-VAMGN---ADEELKE 239 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHH----HHhcCee-eeccC---CCHHHHh
Confidence 78999999999999999999999999999999 8888864 33433 3345554
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.5e-05 Score=68.06 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=43.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA 249 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~ 249 (268)
.|..+++.+++.+++++++++.|||+.+|+.+ -+.+|. .|++. |..++.++.
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~M----l~~ag~-~vAm~---Na~~~vK~~ 239 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREM----LGSVGR-GFIMG---NAMPQLRAE 239 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHH----HHHcCC-ceecc---CChHHHHHh
Confidence 78999999999999999999999999999999 899997 44444 444566653
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.4e-06 Score=64.44 Aligned_cols=84 Identities=15% Similarity=0.094 Sum_probs=59.7
Q ss_pred HcCCCeEEEEcCCCHHHHHHH----HHHhcCCCCCCCeEEecCCCChHHHH--HHHHhcCCCCCCcEEEEecCccchhcc
Q 024415 149 KFASSRIYIVTTKQSRFADAL----LRELAGVTIPPDRIYGLGTGPKVEVL--KQLQKKPELQGMTLHFVEDRLATLKNV 222 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~----l~~~~gl~~~f~~i~~~~~~pk~~~~--~~~~~~~~~~~~~~l~IGDs~~Di~~~ 222 (268)
.++|-.|+.+|+..+..++.+ .+. +.+......++.++. |+|.-. -+...+.+.. |+-|||-+||.+
T Consensus 127 q~RGD~i~FvTGRt~gk~d~vsk~Lak~-F~i~~m~pv~f~Gdk-~k~~qy~Kt~~i~~~~~~----IhYGDSD~Di~A- 199 (237)
T COG3700 127 QRRGDAIYFVTGRTPGKTDTVSKTLAKN-FHITNMNPVIFAGDK-PKPGQYTKTQWIQDKNIR----IHYGDSDNDITA- 199 (237)
T ss_pred HhcCCeEEEEecCCCCcccccchhHHhh-cccCCCcceeeccCC-CCcccccccHHHHhcCce----EEecCCchhhhH-
Confidence 599999999999866544333 334 566655556666554 454443 2344456777 999999999999
Q ss_pred cccccccCCeEEEeecCCCC
Q 024415 223 IKEPELDGWNLYLGDWGYNT 242 (268)
Q Consensus 223 ~~~A~~aG~~~v~v~~g~~~ 242 (268)
|+.+|+..|-+.+..|.
T Consensus 200 ---AkeaG~RgIRilRAaNS 216 (237)
T COG3700 200 ---AKEAGARGIRILRAANS 216 (237)
T ss_pred ---HHhcCccceeEEecCCc
Confidence 99999999988766543
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=59.50 Aligned_cols=115 Identities=11% Similarity=0.187 Sum_probs=83.9
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
-.+|+.+.+.+ +.. ..++|.|+....++...++- .|+. .+.++.... --|..+++.+.+++ +.|+|||
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~a~~e~K~~ii~eLkk~~----~k~vmVG 100 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEF-VGIP--VERVFAGADPEMKAKIIRELKKRY----EKVVMVG 100 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHH-cCCc--eeeeecccCHHHHHHHHHHhcCCC----cEEEEec
Confidence 46888888888 466 99999999888888888888 7863 445544433 25677777776644 4459999
Q ss_pred cCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 214 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
|+.+|+.+ -+++.+-.+-+-.+ +-++.+. ..+|+++.++.|+.++++
T Consensus 101 nGaND~la----Lr~ADlGI~tiq~e-~v~~r~l---~~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 101 NGANDILA----LREADLGICTIQQE-GVPERLL---LTADVVLKEIAEILDLLK 147 (152)
T ss_pred CCcchHHH----hhhcccceEEeccC-CcchHHH---hhchhhhhhHHHHHHHhh
Confidence 99999999 88888766665543 3333333 247899999999888763
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.8e-06 Score=71.01 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=43.9
Q ss_pred CChHHHHHHHHhcCCCCCCcE-EEEecCc-cchhcccccccccCCeEEEeecC
Q 024415 189 GPKVEVLKQLQKKPELQGMTL-HFVEDRL-ATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~-l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
||+|.+++.+.++.+..++++ +||||+. .|+.+ |+++|+.+++|.||
T Consensus 188 KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~----A~~~G~~~i~v~~G 236 (236)
T TIGR01460 188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILG----AKNAGFDTLLVLTG 236 (236)
T ss_pred CCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHH----HHHCCCcEEEEecC
Confidence 699999999999999988887 9999998 89999 99999999999886
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.06 E-value=5e-05 Score=71.18 Aligned_cols=59 Identities=10% Similarity=0.007 Sum_probs=47.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
.|..+++.+++.+++++++++.|||+.+|+.| -+.+|. .|++. |..++.++. .+++..+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeM----Le~AG~-gVAMg---NA~eeVK~~---Ad~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEM----LQLASL-GVALS---NGAEKTKAV---ADVIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHH----HHHCCC-EEEeC---CCCHHHHHh---CCEEeCC
Confidence 89999999999999999999999999999999 999997 44444 344566653 4455544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.05 E-value=7.2e-06 Score=68.12 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=61.1
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCH---HHHHHHHHHhcCCCCCCCeEEecCC--CC------hHHHHHHHHhc-CC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLGT--GP------KVEVLKQLQKK-PE 203 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~---~~~~~~l~~~~gl~~~f~~i~~~~~--~p------k~~~~~~~~~~-~~ 203 (268)
+..||+.+++ +++|+.|+++||.+. .....-|.+ .|+..+-..++-.+. .+ |....+.+.++ +.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 7889999999 699999999999754 455566777 698765444544322 12 56677777777 66
Q ss_pred CCCCcEEEEecCccchhcccccccccC
Q 024415 204 LQGMTLHFVEDRLATLKNVIKEPELDG 230 (268)
Q Consensus 204 ~~~~~~l~IGDs~~Di~~~~~~A~~aG 230 (268)
+. ++|||..+|+.. ++..|
T Consensus 194 Ii----~~iGD~~~D~~~----~~~~~ 212 (229)
T PF03767_consen 194 II----ANIGDQLSDFSG----AKTAG 212 (229)
T ss_dssp EE----EEEESSGGGCHC----THHHH
T ss_pred EE----EEeCCCHHHhhc----ccccc
Confidence 76 999999999999 65543
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.5e-05 Score=72.14 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=66.9
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCC--------CCCCCeEEecCCCCh----------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGV--------TIPPDRIYGLGTGPK---------------- 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl--------~~~f~~i~~~~~~pk---------------- 191 (268)
..-|.+..+| |++|.++.++||++-.++...+..++|- .++||.|++...||.
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g 262 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETG 262 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTS
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCC
Confidence 3456777777 7999999999999999999999986654 478999998776553
Q ss_pred ------------------HHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccc-cCCeEEEeecC
Q 024415 192 ------------------VEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPEL-DGWNLYLGDWG 239 (268)
Q Consensus 192 ------------------~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~-aG~~~v~v~~g 239 (268)
.--+..+.+..+....+++||||+. .||.. ++. .||.+++|-..
T Consensus 263 ~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~----~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 263 KLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILK----SKKRHGWRTAAIIPE 326 (448)
T ss_dssp SEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHH----HHHHH-SEEEEE-TT
T ss_pred ccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhh----hccccceEEEEEehh
Confidence 1123555666677789999999995 79999 554 59999999753
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00014 Score=61.23 Aligned_cols=99 Identities=20% Similarity=0.262 Sum_probs=71.8
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHHHH---HHHhcCCCCCCC-----eEE------ecC-------------CC
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADAL---LRELAGVTIPPD-----RIY------GLG-------------TG 189 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~---l~~~~gl~~~f~-----~i~------~~~-------------~~ 189 (268)
.-+.+.+++ +.+|+++..+|..+..+.... |+. +|+...-. .++ ... .+
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 445666666 689999999999876654444 555 56641111 111 000 02
Q ss_pred -ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 190 -PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 190 -pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
+|.+++..+..+.+..|+.+|||+|+..++..+-+.++..|+.++++.+.
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 78999999999999999999999999887777555588899999999865
|
The function is not known. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.6e-05 Score=76.41 Aligned_cols=113 Identities=18% Similarity=0.229 Sum_probs=80.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC--------------------------eEEecCCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--------------------------RIYGLGTG 189 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~--------------------------~i~~~~~~ 189 (268)
+++||+.+.+ ++.|+++.++|+.....+....+. .|+...-. .++.+...
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 7899999999 799999999999999999999999 79853211 11222222
Q ss_pred --ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC--HhHHHh
Q 024415 190 --PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ--LSDFSR 265 (268)
Q Consensus 190 --pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~--~~~l~~ 265 (268)
.|.++++.+... .+.+.|+||+.+|+.+ .+.|++ ++..|.++ +..+ ..+|+++.+ +..+.+
T Consensus 616 P~~K~~iV~~lq~~----g~~va~iGDG~ND~~a----lk~AdV---Gia~g~g~-~~ak---~aAD~vl~dd~f~~i~~ 680 (917)
T TIGR01116 616 PSHKSELVELLQEQ----GEIVAMTGDGVNDAPA----LKKADI---GIAMGSGT-EVAK---EASDMVLADDNFATIVA 680 (917)
T ss_pred HHHHHHHHHHHHhc----CCeEEEecCCcchHHH----HHhCCe---eEECCCCc-HHHH---HhcCeEEccCCHHHHHH
Confidence 346667766543 4566999999999999 999998 33444332 2323 247898877 887776
Q ss_pred hc
Q 024415 266 KL 267 (268)
Q Consensus 266 ~l 267 (268)
++
T Consensus 681 ~i 682 (917)
T TIGR01116 681 AV 682 (917)
T ss_pred HH
Confidence 54
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00015 Score=61.08 Aligned_cols=81 Identities=15% Similarity=0.132 Sum_probs=54.7
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHH---HHHHHHHhcCCCCCCCeEEec-C-CC-------ChHHHHHHHH
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL-G-TG-------PKVEVLKQLQ 199 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~---~~~~l~~~~gl~~~f~~i~~~-~-~~-------pk~~~~~~~~ 199 (268)
....+..||+.++. +++|++|+++||.+... ...-|++ .|+..+ +.++-. . +. -|.+.-+++.
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li 218 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLI 218 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHH
Confidence 34567889999998 59999999999997643 4445666 688655 433332 2 11 1333334444
Q ss_pred h-cCCCCCCcEEEEecCccchhc
Q 024415 200 K-KPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 200 ~-~~~~~~~~~l~IGDs~~Di~~ 221 (268)
+ .+.+- ..|||..+|+.+
T Consensus 219 ~eGYrIv----~~iGDq~sDl~G 237 (275)
T TIGR01680 219 QEGYNIV----GIIGDQWNDLKG 237 (275)
T ss_pred HcCceEE----EEECCCHHhccC
Confidence 3 46666 999999999987
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.9e-05 Score=59.84 Aligned_cols=144 Identities=12% Similarity=0.069 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcC-------CCCCCCe
Q 024415 113 DALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAG-------VTIPPDR 182 (268)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~g-------l~~~f~~ 182 (268)
++....++...-.+++...+.-.-....++++...+ +..|++++|.|+++...+..+... -+ +..|||.
T Consensus 97 d~k~t~~K~lQg~iw~~gy~sg~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~-s~~gdl~~y~~gyfDt 175 (254)
T KOG2630|consen 97 DEKRTILKQLQGRIWAAGYESGELKAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY-SDAGDLRKYISGYFDT 175 (254)
T ss_pred hcccchhHHHHHHHHHhhcccccccccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc-cCcchHHHHhhhhhhc
Confidence 344455556666666554333233348899999999 589999999999988776665544 22 2234444
Q ss_pred EEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 183 IYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 183 i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
-+|. |-..+.+..+....+.++.+++|.-|-+.-..+ |+.+|+.+..+.++-|.+ ....++.. --++.+++.
T Consensus 176 ~iG~--K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~a----a~~aGl~a~l~~rPgna~-l~dd~~~~-y~~i~~F~~ 247 (254)
T KOG2630|consen 176 TIGL--KVESQSYKKIGHLIGKSPREILFLTDVPREAAA----ARKAGLQAGLVSRPGNAP-LPDDAKVE-YCVIWSFEI 247 (254)
T ss_pred cccc--eehhHHHHHHHHHhCCChhheEEeccChHHHHH----HHhcccceeeeecCCCCC-CCcccccc-eeeeccchh
Confidence 2221 245778888988999999999999999999999 999999888777663322 22222211 235666666
Q ss_pred HHh
Q 024415 263 FSR 265 (268)
Q Consensus 263 l~~ 265 (268)
|.+
T Consensus 248 l~~ 250 (254)
T KOG2630|consen 248 LEN 250 (254)
T ss_pred hhc
Confidence 554
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00017 Score=56.40 Aligned_cols=88 Identities=18% Similarity=0.269 Sum_probs=51.9
Q ss_pred CCChHHHH---HcCCCeEEEEcCCCHHHHH---HHHHHh--cCCCCCCCeEEecCC-------------CC---hHHHHH
Q 024415 141 YPGIPDAL---KFASSRIYIVTTKQSRFAD---ALLREL--AGVTIPPDRIYGLGT-------------GP---KVEVLK 196 (268)
Q Consensus 141 ~pg~~e~L---~~~g~~i~ivTn~~~~~~~---~~l~~~--~gl~~~f~~i~~~~~-------------~p---k~~~~~ 196 (268)
.||+.+++ +++|++++++|+++..... ..+..+ .|...+...++++.. .| |.+.++
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~ 108 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLR 108 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHH
Confidence 35666666 5899999999999877764 455541 022212223443321 13 455666
Q ss_pred HHHhcCCCCCCcE-EEEecCccchhcccccccccCCe
Q 024415 197 QLQKKPELQGMTL-HFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 197 ~~~~~~~~~~~~~-l~IGDs~~Di~~~~~~A~~aG~~ 232 (268)
.+...+...-... +.+||+.+|+.+ =+++|+.
T Consensus 109 ~i~~~~~~~~~~f~~~~gn~~~D~~~----y~~~gi~ 141 (157)
T smart00775 109 DIKSLFPPQGNPFYAGFGNRITDVIS----YSAVGIP 141 (157)
T ss_pred HHHHhcCCCCCCEEEEeCCCchhHHH----HHHcCCC
Confidence 6665433211122 346777999999 8889984
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.77 E-value=5.4e-05 Score=58.31 Aligned_cols=90 Identities=18% Similarity=0.184 Sum_probs=59.3
Q ss_pred CChHHHH--HcCCCeEEEEcCCCHHHHHHHHHHhcCC-CCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCc-c
Q 024415 142 PGIPDAL--KFASSRIYIVTTKQSRFADALLRELAGV-TIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRL-A 217 (268)
Q Consensus 142 pg~~e~L--~~~g~~i~ivTn~~~~~~~~~l~~~~gl-~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~ 217 (268)
.++...| .+...+++.+|...+.+.+..-.. +.. ..++|.+.-.+...|-++++ ..+++ +|+.|+. +
T Consensus 75 q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h~KV~~vr----th~id----lf~ed~~~n 145 (194)
T COG5663 75 QLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLHHKVEAVR----THNID----LFFEDSHDN 145 (194)
T ss_pred HHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhcccccchhhH----hhccC----ccccccCch
Confidence 3555666 466688999998877776665554 222 34566542222223444444 34566 9999995 5
Q ss_pred chhcccccccccCCeEEEeecCCCCHH
Q 024415 218 TLKNVIKEPELDGWNLYLGDWGYNTQK 244 (268)
Q Consensus 218 Di~~~~~~A~~aG~~~v~v~~g~~~~~ 244 (268)
=++. |+++|++++.+++.||...
T Consensus 146 a~~i----Ak~~~~~vilins~ynRkp 168 (194)
T COG5663 146 AGQI----AKNAGIPVILINSPYNRKP 168 (194)
T ss_pred HHHH----HHhcCCcEEEecCcccccc
Confidence 6666 9999999999999987543
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.002 Score=59.51 Aligned_cols=115 Identities=11% Similarity=-0.033 Sum_probs=67.6
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCC-------
Q 024415 107 DWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIP------- 179 (268)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~------- 179 (268)
..|.+.+++....+++...+.... ++|...+.++++|.+ +|+|..++.+++...+.++|++..
T Consensus 87 f~G~~~~el~~~~r~~l~~f~~~~---------l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev 156 (497)
T PLN02177 87 FAGLKIRDIELVSRSVLPKFYAED---------VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEV 156 (497)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHh---------cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEE
Confidence 346666665555455555554322 667777777777765 999999999999999753476522
Q ss_pred -CCeEEecC-CCCh----HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEee
Q 024415 180 -PDRIYGLG-TGPK----VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 180 -f~~i~~~~-~~pk----~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
.+..+++. .+++ .+-.+++.+..+..... ...|||.+|..+ -..++- .++|.
T Consensus 157 ~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~pl----L~~a~e-~y~V~ 214 (497)
T PLN02177 157 SKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDF----MSICKE-GYMVP 214 (497)
T ss_pred CcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHH----HHhCCc-cEEeC
Confidence 12223222 1221 22233333444433222 899999999999 777773 44444
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00015 Score=59.79 Aligned_cols=71 Identities=14% Similarity=0.095 Sum_probs=52.1
Q ss_pred EcCCCHHHHHHHHHHhcCCC----CCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeE
Q 024415 158 VTTKQSRFADALLRELAGVT----IPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 158 vTn~~~~~~~~~l~~~~gl~----~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~ 233 (268)
.++.....+...+.. .++. .+|..|...+. .|+.+++.+++.++++++++++|||+.+|+.+ .+.+|..+
T Consensus 145 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~m----l~~ag~~v 218 (221)
T TIGR02463 145 DSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPL----LEVADYAV 218 (221)
T ss_pred CchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHH----HHhCCceE
Confidence 344555556666776 5664 33333333222 68889999999999999999999999999999 99999754
Q ss_pred E
Q 024415 234 Y 234 (268)
Q Consensus 234 v 234 (268)
+
T Consensus 219 a 219 (221)
T TIGR02463 219 V 219 (221)
T ss_pred E
Confidence 4
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00017 Score=59.27 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=65.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHhcCCCCCCC---eEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccccc
Q 024415 153 SRIYIVTTKQSRFADALLRELAGVTIPPD---RIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 153 ~~i~ivTn~~~~~~~~~l~~~~gl~~~f~---~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~a 229 (268)
..++++++.........++. .++...+. .-+......|..+++.+++.++++++++++|||+.+|+.+ .+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~m----l~~a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDL----FRVV 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHH----HHhC
Confidence 34455677666777777777 56643321 1122222388999999999999999999999999999999 9999
Q ss_pred CCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 230 GWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 230 G~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
|+.+. +. |..+++++. .+++..+
T Consensus 183 g~~va-m~---na~~~~k~~---A~~v~~~ 205 (215)
T TIGR01487 183 GFKVA-VA---NADDQLKEI---ADYVTSN 205 (215)
T ss_pred CCeEE-cC---CccHHHHHh---CCEEcCC
Confidence 97544 33 344566653 3465543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00055 Score=58.35 Aligned_cols=81 Identities=6% Similarity=-0.056 Sum_probs=52.5
Q ss_pred HcCCCeEEEE-cCCCHHHHHHHHHHhcCCC----CCCCeEEe------------------cC--CCChHHHHHHHHhcCC
Q 024415 149 KFASSRIYIV-TTKQSRFADALLRELAGVT----IPPDRIYG------------------LG--TGPKVEVLKQLQKKPE 203 (268)
Q Consensus 149 ~~~g~~i~iv-Tn~~~~~~~~~l~~~~gl~----~~f~~i~~------------------~~--~~pk~~~~~~~~~~~~ 203 (268)
+++-+.--++ +...... ...+.. .|+. ..|-++.+ .+ ..+|..+++.+.+.+.
T Consensus 144 ~~Re~SEp~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 144 QKREYSEIFSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred HhccCCcceEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 3444544444 5555544 666666 5764 23444444 21 2278888877777655
Q ss_pred CC--CCcEEEEecCccchhcccccccccCCeEEE
Q 024415 204 LQ--GMTLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 204 ~~--~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~ 235 (268)
.. +-.++-+|||++|+.+ -..+-+.+|.
T Consensus 222 ~~~~~~~tiaLGDspND~~m----Le~~D~~vvi 251 (302)
T PRK12702 222 RHLGPIKALGIGCSPPDLAF----LRWSEQKVVL 251 (302)
T ss_pred hccCCceEEEecCChhhHHH----HHhCCeeEEe
Confidence 43 5688999999999999 8888876664
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00055 Score=56.09 Aligned_cols=81 Identities=14% Similarity=0.225 Sum_probs=59.1
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHH----HHHHHHHhcCCCCCCC-eE-EecCCCChHHHHHHHHhcCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRF----ADALLRELAGVTIPPD-RI-YGLGTGPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~----~~~~l~~~~gl~~~f~-~i-~~~~~~pk~~~~~~~~~~~~~~~ 206 (268)
....+.||+.|+| .++|..|..+||+..+. ...-|++ .|+....+ .+ +-.+.+||..-.+.+.+.+.+.
T Consensus 119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~iV- 196 (274)
T COG2503 119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYKIV- 196 (274)
T ss_pred cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhcccee-
Confidence 3456889999999 59999999999998776 3344566 57764432 23 3333348877777787777777
Q ss_pred CcEEEEecCccchhc
Q 024415 207 MTLHFVEDRLATLKN 221 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~ 221 (268)
++|||...|...
T Consensus 197 ---m~vGDNl~DF~d 208 (274)
T COG2503 197 ---MLVGDNLDDFGD 208 (274)
T ss_pred ---eEecCchhhhcc
Confidence 999999887765
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00025 Score=55.30 Aligned_cols=78 Identities=17% Similarity=0.149 Sum_probs=58.3
Q ss_pred ccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCC-CCC-CeEEecCC--CChHHHHHHHHhcCCCCCCcE
Q 024415 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLGT--GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 136 ~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~-~~f-~~i~~~~~--~pk~~~~~~~~~~~~~~~~~~ 209 (268)
....++||+.++|+ +.++.++|+|++.+..+..+++. ++.. .+| +.+++.+. ++...- +..-.+.....+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~Kd---L~~i~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKS---LLRLFPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCcccc---HHHHcCCCcccE
Confidence 44578999999992 56699999999999999999999 7887 478 67787765 232222 222234566778
Q ss_pred EEEecCcc
Q 024415 210 HFVEDRLA 217 (268)
Q Consensus 210 l~IGDs~~ 217 (268)
++|+|++.
T Consensus 131 vivDd~~~ 138 (156)
T TIGR02250 131 VIIDDRED 138 (156)
T ss_pred EEEeCCHH
Confidence 99999974
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00093 Score=63.87 Aligned_cols=108 Identities=19% Similarity=0.167 Sum_probs=77.9
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
++.||+++.+ ++.|+++.++|+.....+....+. .|+.+ +++.... -|.+.++.++.+-.. +.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~~G~~----VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQAEGRL----VAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHHcCCe----EEEECC
Confidence 6889999998 799999999999999999999999 89854 3443332 578888888876444 499999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhh
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRK 266 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~ 266 (268)
+.+|..+ -+.|.+ .|++.+| +. .-++ -.|.++. ++..+...
T Consensus 516 GvNDAPA----La~ADV-GIAMgsG--Td-vAke---AADiVLldd~~s~Iv~a 558 (679)
T PRK01122 516 GTNDAPA----LAQADV-GVAMNSG--TQ-AAKE---AGNMVDLDSNPTKLIEV 558 (679)
T ss_pred CcchHHH----HHhCCE-eEEeCCC--CH-HHHH---hCCEEEeCCCHHHHHHH
Confidence 9999999 777775 3344433 32 3333 2445543 56665544
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00057 Score=65.18 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=77.5
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
++.||+.+.+ ++.|+++.++|+.....+....+. +|+.+ +++.... .|.+.++.++.+.+ .+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~----v~a~~~PedK~~~v~~lq~~g~----~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDD----FIAEATPEDKIALIRQEQAEGK----LVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCE----EEcCCCHHHHHHHHHHHHHcCC----eEEEECC
Confidence 7889999999 699999999999999999999999 79864 3333221 46888888877644 4699999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhh
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 266 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~ 266 (268)
+.+|..+ -+.+++. +++..| +. .-+++ .|+++ ++++.+...
T Consensus 517 G~NDapA----L~~AdvG-iAm~~g--t~-~akea---adivLldd~~s~Iv~a 559 (675)
T TIGR01497 517 GTNDAPA----LAQADVG-VAMNSG--TQ-AAKEA---ANMVDLDSDPTKLIEV 559 (675)
T ss_pred CcchHHH----HHhCCEe-EEeCCC--CH-HHHHh---CCEEECCCCHHHHHHH
Confidence 9999999 8888863 344433 22 33332 34554 345555443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00089 Score=64.19 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=76.9
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
++.|+..+.+ |+.|+++.++|+..+..++.+.+. +|++.++. .-. .-|.+.++++.++. ..+.||||
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~A----ellPedK~~~V~~l~~~g----~~VamVGD 607 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRA----ELLPEDKAEIVRELQAEG----RKVAMVGD 607 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhhec----cCCcHHHHHHHHHHHhcC----CEEEEEeC
Confidence 7889999999 799999999999999999999999 79855432 211 14688899998654 44599999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhhc
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 267 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~l 267 (268)
+.||-.+ -..|-+ ++.-|.++.-..+. .|+++- ++..+...+
T Consensus 608 GINDAPA----LA~AdV---GiAmG~GtDvA~ea----ADvvL~~~dL~~v~~ai 651 (713)
T COG2217 608 GINDAPA----LAAADV---GIAMGSGTDVAIEA----ADVVLMRDDLSAVPEAI 651 (713)
T ss_pred CchhHHH----HhhcCe---eEeecCCcHHHHHh----CCEEEecCCHHHHHHHH
Confidence 9999988 444443 33334334433332 455543 466665543
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0008 Score=64.23 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=77.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
++.||+++.+ ++.|+++.++|+.+...+..+.+. +|+.++ ++.-.. -|.++++.++++- +.+.|+||
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v----~A~~~PedK~~iV~~lQ~~G----~~VaMtGD 511 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRF----VAECKPEDKINVIREEQAKG----HIVAMTGD 511 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceE----EcCCCHHHHHHHHHHHHhCC----CEEEEECC
Confidence 7899999999 789999999999999999999999 899653 333221 4688888887663 34599999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhh
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 266 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~ 266 (268)
+.+|..+ -+.|.+ .|++.+| +. .-++ -.|.++ ++++.+...
T Consensus 512 GvNDAPA----La~ADV-GIAMgsG--Td-vAke---AADiVLldd~ls~Iv~a 554 (673)
T PRK14010 512 GTNDAPA----LAEANV-GLAMNSG--TM-SAKE---AANLIDLDSNPTKLMEV 554 (673)
T ss_pred ChhhHHH----HHhCCE-EEEeCCC--CH-HHHH---hCCEEEcCCCHHHHHHH
Confidence 9999999 788876 3344433 33 3333 244555 456665543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00076 Score=55.61 Aligned_cols=86 Identities=16% Similarity=0.115 Sum_probs=58.3
Q ss_pred eEEEEcCCCHHHHHHHHHHhcCCCCCC---C-eE-EecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccc
Q 024415 154 RIYIVTTKQSRFADALLRELAGVTIPP---D-RI-YGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (268)
Q Consensus 154 ~i~ivTn~~~~~~~~~l~~~~gl~~~f---~-~i-~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~ 228 (268)
...+.+......+...++. ++....+ . .+ +.....+|..+++.+++.++++++++++|||+.+|+.+ ++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m----~~~ 183 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKE-LGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDL----FEV 183 (225)
T ss_pred eEEEeecCCHHHHHHHHHh-cCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHH----HHh
Confidence 3445555556666777777 5643110 0 01 11112389999999999999999999999999999999 999
Q ss_pred cCCeEEEeecCCCCHHHHHh
Q 024415 229 DGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 229 aG~~~v~v~~g~~~~~~~~~ 248 (268)
+|.. +++. |..++.++
T Consensus 184 ag~~-vam~---Na~~~~k~ 199 (225)
T TIGR01482 184 PGFG-VAVA---NAQPELKE 199 (225)
T ss_pred cCce-EEcC---ChhHHHHH
Confidence 9985 4443 34445555
|
catalyze the same reaction as SPP. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0015 Score=65.35 Aligned_cols=114 Identities=19% Similarity=0.209 Sum_probs=79.1
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC-----------------------eEEecCC-CCh
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD-----------------------RIYGLGT-GPK 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~-----------------------~i~~~~~-~pk 191 (268)
++.|++.+++ ++.|+++.++|+.....+..+.+. .|+...-. .+++.-. ..|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 7899999999 699999999999999999999999 89963222 2333222 145
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhhc
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 267 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~l 267 (268)
.++++.+.++-. .+.|+||+.+|..| -+.|.+ ++.-|.+..+.-++ .+|+++. +++.+...+
T Consensus 658 ~~iV~~lq~~g~----vVam~GDGvNDapA----Lk~AdV---GIAmg~~gtdvAk~---aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 658 QLLVLMLKDMGE----VVAVTGDGTNDAPA----LKLADV---GFSMGISGTEVAKE---ASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHHCCC----EEEEECCCCchHHH----HHhCCc---ceecCCCccHHHHH---hCCEEEecCCHHHHHHHH
Confidence 778888876533 45999999999999 777776 22223112222222 3677776 677666543
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0015 Score=55.52 Aligned_cols=28 Identities=11% Similarity=0.119 Sum_probs=21.1
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
+++|++++++|+++...+...++. +++.
T Consensus 33 ~~~G~~~~iaTGR~~~~~~~~~~~-l~~~ 60 (270)
T PRK10513 33 RAKGVNVVLTTGRPYAGVHRYLKE-LHME 60 (270)
T ss_pred HHCCCEEEEecCCChHHHHHHHHH-hCCC
Confidence 567788888888887777777777 5764
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0019 Score=65.06 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=77.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC----------CeEEecC------------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP----------DRIYGLG------------------ 187 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f----------~~i~~~~------------------ 187 (268)
++.|++.+++ ++.|+++.++|+.....+..+.+. .|+.... ..++++.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 7899999999 799999999999999999999999 8995321 1222221
Q ss_pred -----C-CChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC--
Q 024415 188 -----T-GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ-- 259 (268)
Q Consensus 188 -----~-~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~-- 259 (268)
. ..|.++++.+...-. .+.|+||+.+|..+ -+.|.+. +.-|.+..+.-++ .+|+++.+
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~----~Vam~GDGvNDapa----Lk~AdVG---IAmg~~gt~vak~---aADivl~dd~ 790 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKA----FCAMTGDGVNDSPS----LKMANVG---IAMGINGSDVAKD---ASDIVLSDDN 790 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCC----eeEEeCCCcchHHH----HHhCCcc---EecCCCccHHHHH---hcCEEEecCC
Confidence 1 134667777776533 45999999999999 8888762 2223222223232 36677754
Q ss_pred HhHHHhhc
Q 024415 260 LSDFSRKL 267 (268)
Q Consensus 260 ~~~l~~~l 267 (268)
+..+.+.+
T Consensus 791 f~~I~~~i 798 (1053)
T TIGR01523 791 FASILNAI 798 (1053)
T ss_pred HHHHHHHH
Confidence 77665543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0005 Score=57.77 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=54.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccccc-------CCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD-------GWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~a-------G~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
.|..+++.+.++++..+.+++||||+.+|+.+ ++.+ |...+.|.+|. ....+++++.++.+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~----~~~~~~~~~~~g~~~v~v~~g~--------~~~~A~~~~~~~~~ 234 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDA----FRVVNNQWGNYGFYPVPIGSGS--------KKTVAKFHLTGPQQ 234 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHH----HHHHhcccCCCCeEEEEEecCC--------cCCCceEeCCCHHH
Confidence 56899999999999999999999999999999 7777 66777776552 11356799999999
Q ss_pred HHhhc
Q 024415 263 FSRKL 267 (268)
Q Consensus 263 l~~~l 267 (268)
+.++|
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 88766
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0011 Score=56.35 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=39.5
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhh
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA 249 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~ 249 (268)
..+++.+++.+++++++++.|||+.+|+.+ -+.+|.. |++. |..+++++.
T Consensus 192 g~al~~l~~~lgi~~~~viafGD~~NDi~M----l~~ag~~-vAm~---NA~~~vK~~ 241 (266)
T PRK10976 192 GHALEAVAKKLGYSLKDCIAFGDGMNDAEM----LSMAGKG-CIMG---NAHQRLKDL 241 (266)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCcccHHH----HHHcCCC-eeec---CCcHHHHHh
Confidence 556788888899999999999999999999 8999974 4444 344566653
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0036 Score=62.03 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=75.4
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC----------------------eEEecCC-CChH
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD----------------------RIYGLGT-GPKV 192 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~----------------------~i~~~~~-~pk~ 192 (268)
++.|++.+.+ ++.|+++.++|+.....+..+.+. .|+... + .+++.-. .-|.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 7899999999 799999999999999999999999 899521 1 1222222 1456
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHh
Q 024415 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSR 265 (268)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~ 265 (268)
++++.+.++ .+.+.|+||+.+|..+ -+.|.+. |++..| + +.-++ ..|+++ +++..+.+
T Consensus 593 ~iV~~lq~~----G~vVam~GDGvNDapA----Lk~AdVG-IAmg~g--t-dvAk~---aADiVLldd~~~~I~~ 652 (867)
T TIGR01524 593 RIIGLLKKA----GHTVGFLGDGINDAPA----LRKADVG-ISVDTA--A-DIAKE---ASDIILLEKSLMVLEE 652 (867)
T ss_pred HHHHHHHhC----CCEEEEECCCcccHHH----HHhCCEE-EEeCCc--c-HHHHH---hCCEEEecCChHHHHH
Confidence 777777765 2456999999999999 8888873 334433 2 23333 245655 44554443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.003 Score=62.74 Aligned_cols=109 Identities=17% Similarity=0.117 Sum_probs=75.2
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe-----------------------EEecCCC-Ch
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR-----------------------IYGLGTG-PK 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~-----------------------i~~~~~~-pk 191 (268)
++.|++.+.+ ++.|+++.++|+.+...+..+.+. .|+.. +. +++.-.. .|
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 7889999999 799999999999999999999999 89952 22 2222221 35
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHh
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSR 265 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~ 265 (268)
.++++.+..+- +.+.|+||+.+|..+ -+.|.+ .|++.+| + +.-++ -.|+++ +++..+.+
T Consensus 627 ~~IV~~Lq~~G----~vVam~GDGvNDaPA----Lk~ADV-GIAmg~g--t-dvAke---aADiVLldd~~~~I~~ 687 (902)
T PRK10517 627 ERIVTLLKREG----HVVGFMGDGINDAPA----LRAADI-GISVDGA--V-DIARE---AADIILLEKSLMVLEE 687 (902)
T ss_pred HHHHHHHHHCC----CEEEEECCCcchHHH----HHhCCE-EEEeCCc--C-HHHHH---hCCEEEecCChHHHHH
Confidence 67777777653 345999999999999 788876 3344333 2 23333 355666 34555443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0026 Score=63.22 Aligned_cols=111 Identities=19% Similarity=0.160 Sum_probs=76.9
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC----------------------eEEecCCC-ChH
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD----------------------RIYGLGTG-PKV 192 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~----------------------~i~~~~~~-pk~ 192 (268)
++.|++.+++ ++.|+++.++|+.+...+..+.+. .|+..- + .+++.-.. .|.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 7889999999 799999999999999999999999 899521 1 12322221 457
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhh
Q 024415 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 266 (268)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~ 266 (268)
.+++.+..+- +-+.|+||+.+|..+ -+.|.+- |++.+| +. .-++ -.|+++ +++..+.+.
T Consensus 628 ~iV~~Lq~~G----~vVamtGDGvNDaPA----Lk~ADVG-IAmg~g--td-vAke---aADiVLldd~f~~Iv~a 688 (903)
T PRK15122 628 RVLKALQANG----HTVGFLGDGINDAPA----LRDADVG-ISVDSG--AD-IAKE---SADIILLEKSLMVLEEG 688 (903)
T ss_pred HHHHHHHhCC----CEEEEECCCchhHHH----HHhCCEE-EEeCcc--cH-HHHH---hcCEEEecCChHHHHHH
Confidence 7778887653 445999999999999 7877763 344433 22 2233 355666 456655443
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.005 Score=60.12 Aligned_cols=89 Identities=13% Similarity=0.072 Sum_probs=66.1
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC---Ce-----------------------EEecCCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP---DR-----------------------IYGLGTG 189 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f---~~-----------------------i~~~~~~ 189 (268)
++.|++.+.+ ++.|+++.++|+.....+..+.+. .|+.... +. +++.-..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 7899999999 799999999999999999999999 8996420 00 2222221
Q ss_pred -ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEee
Q 024415 190 -PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 190 -pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
.|..+++.+..+- +.+.|+||+.+|..+ -+.|.+. |++.
T Consensus 521 e~K~~iV~~lq~~G----~~VamvGDGvNDapA----L~~AdVG-IAm~ 560 (755)
T TIGR01647 521 EHKYEIVEILQKRG----HLVGMTGDGVNDAPA----LKKADVG-IAVA 560 (755)
T ss_pred HHHHHHHHHHHhcC----CEEEEEcCCcccHHH----HHhCCee-EEec
Confidence 4566777776553 446999999999999 7877763 3444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0055 Score=61.62 Aligned_cols=113 Identities=13% Similarity=0.140 Sum_probs=74.6
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC------------------------CeEEec-----
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP------------------------DRIYGL----- 186 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f------------------------~~i~~~----- 186 (268)
++.|++.+.+ +++|+++.++|+.....+....+. .|+...- ..++++
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 7889999999 699999999999999999999999 7884211 012221
Q ss_pred --------------------CC-CChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHH
Q 024415 187 --------------------GT-GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 245 (268)
Q Consensus 187 --------------------~~-~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~ 245 (268)
-. ..|..+++.+.+.- +-+.|+||+.+|+.+ -+.|.+ ++.-|....+.
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g----~vv~~~GDG~ND~pa----Lk~AdV---Giamg~~G~~v 715 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQG----AIVAVTGDGVNDSPA----LKKADI---GVAMGIAGSDV 715 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCC----CEEEEECCCcccHHH----HhhCCc---ceecCCcccHH
Confidence 11 13455666665442 346999999999999 888876 33334222223
Q ss_pred HHhhcCCCCEEEcC--HhHHHhh
Q 024415 246 REEAASIPRIQLLQ--LSDFSRK 266 (268)
Q Consensus 246 ~~~~~~~p~~~~~~--~~~l~~~ 266 (268)
.++ -.|+++.+ +.-+.+.
T Consensus 716 ak~---aADivL~dd~f~~Iv~a 735 (997)
T TIGR01106 716 SKQ---AADMILLDDNFASIVTG 735 (997)
T ss_pred HHH---hhceEEecCCHHHHHHH
Confidence 333 35677665 6665543
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0022 Score=53.90 Aligned_cols=52 Identities=15% Similarity=0.026 Sum_probs=44.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
+|..+++.+.+.++++++++++|||+.+|+.+ .+.++...|++.+ ...+++.
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~m----l~~~~~~~va~~n---a~~~~k~ 218 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIEL----FEIGSVRGVIVSN---AQEELLQ 218 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHH----HHccCCcEEEECC---CHHHHHH
Confidence 89999999999999999999999999999999 8887777788764 4445553
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0027 Score=52.91 Aligned_cols=57 Identities=16% Similarity=-0.041 Sum_probs=45.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCC
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPR 254 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~ 254 (268)
+|+.+++.+.++++++++++++|||+.+|+.+ .+.+|... ++. +...++++....|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~m----l~~~~~~i-av~---na~~~~k~~a~~~~ 215 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEM----LRGLTLGV-VVG---NHDPELEGLRHQQR 215 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHH----HcCCCcEE-EEc---CCcHHHHHhhcCCc
Confidence 89999999999999999999999999999999 88888644 443 34456666534444
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0024 Score=52.38 Aligned_cols=28 Identities=25% Similarity=0.236 Sum_probs=21.6
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
+++|++++++|+++...+...++. +++.
T Consensus 31 ~~~g~~~~~~TGR~~~~~~~~~~~-l~~~ 58 (215)
T TIGR01487 31 EKKGIPVSLVTGNTVPFARALAVL-IGTS 58 (215)
T ss_pred HHCCCEEEEEcCCcchhHHHHHHH-hCCC
Confidence 567888888888888777777777 5664
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0034 Score=54.95 Aligned_cols=69 Identities=19% Similarity=0.123 Sum_probs=40.6
Q ss_pred CCeEEEEcCCC---HHH-HHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccc
Q 024415 152 SSRIYIVTTKQ---SRF-ADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 152 g~~i~ivTn~~---~~~-~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~ 227 (268)
|+++.++||+. ... ++.+.+. +|+....+.|+++.. ++..+...++ ..+++||-+. -... ++
T Consensus 36 g~~~~flTNn~g~s~~~~~~~l~~~-lG~~~~~~~i~~s~~-----~~~~ll~~~~---~~v~viG~~~-~~~~----l~ 101 (321)
T TIGR01456 36 KIPYIFLTNGGGFSERARAEEISSL-LGVDVSPLQVIQSHS-----PYKSLVNKYE---KRILAVGTGS-VRGV----AE 101 (321)
T ss_pred CCCEEEEecCCCCCHHHHHHHHHHH-cCCCCCHHHHHhhhH-----HHHHHHHHcC---CceEEEeChH-HHHH----HH
Confidence 89999999986 444 3334477 688654445544431 3344444432 2568888653 2344 66
Q ss_pred ccCCeEE
Q 024415 228 LDGWNLY 234 (268)
Q Consensus 228 ~aG~~~v 234 (268)
..|+..+
T Consensus 102 ~~G~~~v 108 (321)
T TIGR01456 102 GYGFQNV 108 (321)
T ss_pred HcCCccc
Confidence 7887654
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.011 Score=57.09 Aligned_cols=74 Identities=20% Similarity=0.257 Sum_probs=60.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
.+.|++..++ |+.|++++++|+.....++...+. .| ++.|++.-.. .|.+.++.+.+.-+.. .||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~~~V----aMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNGGPV----AMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcCCcE----EEEeC
Confidence 5778888777 899999999999999999999999 68 5566655432 5788999998876444 99999
Q ss_pred Cccchhc
Q 024415 215 RLATLKN 221 (268)
Q Consensus 215 s~~Di~~ 221 (268)
+.+|--+
T Consensus 794 GINDaPA 800 (951)
T KOG0207|consen 794 GINDAPA 800 (951)
T ss_pred CCCccHH
Confidence 9999877
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0067 Score=50.30 Aligned_cols=29 Identities=24% Similarity=0.131 Sum_probs=23.9
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~ 178 (268)
+++|++++++|+++...+...++. +|+..
T Consensus 28 ~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~ 56 (225)
T TIGR02461 28 KDLGFPIVFVSSKTRAEQEYYREE-LGVEP 56 (225)
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 577899999999988888888888 68754
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.012 Score=59.61 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=75.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC----------------------------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD---------------------------------- 181 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~---------------------------------- 181 (268)
++.||+.+++ ++.|+++.++|+.....+...... .|+-..-.
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 709 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNL 709 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhh
Confidence 7899999999 799999999999988888888777 67632211
Q ss_pred -------eEEecCC----------------------------C--ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccc
Q 024415 182 -------RIYGLGT----------------------------G--PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 224 (268)
Q Consensus 182 -------~i~~~~~----------------------------~--pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~ 224 (268)
.+++++. . .|.++++.+.... ...+++|||+.+|+.|
T Consensus 710 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~---~~~vl~iGDG~ND~~m--- 783 (1057)
T TIGR01652 710 GDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKST---GKTTLAIGDGANDVSM--- 783 (1057)
T ss_pred ccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcC---CCeEEEEeCCCccHHH---
Confidence 1222210 0 2344555554432 3457999999999999
Q ss_pred cccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 225 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 225 ~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
-+.|.+.. ++. |. +-.++...+|+.+.+++.|.++|
T Consensus 784 -lk~AdVGI-gi~-g~----eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 784 -IQEADVGV-GIS-GK----EGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred -HhhcCeee-Eec-Ch----HHHHHHHhhhhhhhhHHHHHHHH
Confidence 78777633 332 21 11122234789999988888765
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0049 Score=52.37 Aligned_cols=59 Identities=14% Similarity=0.033 Sum_probs=47.2
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
.|..+++.+++.+++++++++.|||+.+|+.+ -+.+|. .|++. |..++++.. .+++..+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~M----l~~ag~-~vAm~---NA~~~vK~~---A~~vt~~ 254 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAM----IEYAGV-GVAMG---NAIPSVKEV---AQFVTKS 254 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHH----HHhCCc-eEEec---CccHHHHHh---cCeeccC
Confidence 88999999999999999999999999999999 899997 44444 344566653 3455544
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.025 Score=47.26 Aligned_cols=78 Identities=22% Similarity=0.248 Sum_probs=53.5
Q ss_pred cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccccc
Q 024415 150 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 150 ~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~a 229 (268)
..-++++|||..+....+.+++.+-.+.-..|..+.-..-||..+++.+.-. ||++|....++. |. .
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~~K~~vL~~~~ph--------IFFDDQ~~H~~~----a~-~ 250 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGLPKGPVLKAFRPH--------IFFDDQDGHLES----AS-K 250 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCCchhHHHHhhCCC--------EeecCchhhhhH----hh-c
Confidence 4458999999776655555555422222235544433334888888877655 999999999999 77 7
Q ss_pred CCeEEEeecCC
Q 024415 230 GWNLYLGDWGY 240 (268)
Q Consensus 230 G~~~v~v~~g~ 240 (268)
+++++.|-+|.
T Consensus 251 ~vps~hVP~gv 261 (264)
T PF06189_consen 251 VVPSGHVPYGV 261 (264)
T ss_pred CCCEEeccCCc
Confidence 78888887764
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.11 Score=42.63 Aligned_cols=39 Identities=13% Similarity=0.276 Sum_probs=31.4
Q ss_pred cCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCC
Q 024415 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV 176 (268)
Q Consensus 137 ~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl 176 (268)
..++.||+.++++ +.-+.=+|+|.+.++++....+. .|+
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGV 121 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCC
Confidence 3578899999995 44467788999999898888887 677
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.01 Score=49.61 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=24.3
Q ss_pred HcCCCeEEEEcCCC---HHHHHHHHHHhcCCCCCCCeEEecC
Q 024415 149 KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLG 187 (268)
Q Consensus 149 ~~~g~~i~ivTn~~---~~~~~~~l~~~~gl~~~f~~i~~~~ 187 (268)
+++|+++.++||+. .......|..++|+....+.++++.
T Consensus 27 ~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 27 RAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred HHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 57889999999765 3333334444247766666676653
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.018 Score=48.63 Aligned_cols=40 Identities=18% Similarity=0.038 Sum_probs=36.4
Q ss_pred HHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC
Q 024415 148 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT 188 (268)
Q Consensus 148 L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~ 188 (268)
|++.|-.+++=|.+.++.+...++. ++|..+||.|++...
T Consensus 154 Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 154 LKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGGN 193 (297)
T ss_pred HHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCCc
Confidence 4788999999999999999999999 899999999998763
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.0034 Score=50.94 Aligned_cols=40 Identities=18% Similarity=0.051 Sum_probs=37.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeE
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~ 233 (268)
+|+.+++.++++++.+++++++|||+.+|+.+ ++.+|+..
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~----~~~~~~~v 202 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEM----FEVAGLAV 202 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHH----HHHcCCce
Confidence 89999999999999999999999999999999 99999754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.0053 Score=53.03 Aligned_cols=93 Identities=20% Similarity=0.260 Sum_probs=67.6
Q ss_pred CChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCC--CCCCCeEEecCCCCh-------------------------
Q 024415 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGV--TIPPDRIYGLGTGPK------------------------- 191 (268)
Q Consensus 142 pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl--~~~f~~i~~~~~~pk------------------------- 191 (268)
|....+| +.+|.++.++||++-.++..-++.+.|- .+.||.|+.-..+|+
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~ 322 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVD 322 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhh
Confidence 3444555 6999999999999999999988864443 477998876554433
Q ss_pred ---------HHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEee
Q 024415 192 ---------VEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 192 ---------~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~ 237 (268)
...+..+.+--+.-..+++|+||+. +|+..+ ..+.||.+-++-
T Consensus 323 klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~---tlkhgWRTgAII 375 (510)
T KOG2470|consen 323 KLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADL---TLKHGWRTGAII 375 (510)
T ss_pred hcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhh---Hhhcccccccch
Confidence 1133556666677788999999995 798883 448898776654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.0074 Score=49.67 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=25.4
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
+++|++++++||++...+...++. +++.
T Consensus 29 ~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 29 QEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 678999999999999999999999 7875
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0074 Score=50.87 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
.|..+++.+++.+++.++++++|||+.+|+.+ .+.+|+.++ +. +..+..+. ..+++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m----~~~~~~~~a-~~---na~~~~k~---~a~~~~~~ 246 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEM----LEAAGYGVA-MG---NADEELKA---LADYVTDS 246 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHH----HHhCCceeE-ec---CchHHHHH---hCCEEecC
Confidence 78999999999999999999999999999999 999998544 32 33445554 24466554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.02 Score=57.14 Aligned_cols=87 Identities=14% Similarity=0.213 Sum_probs=66.9
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC--eEEecCC---C--------------------
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGT---G-------------------- 189 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~--~i~~~~~---~-------------------- 189 (268)
.|+.|++++++ +++|+++.++|+.....+..+.+. .|+...-+ .++++.. .
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 38999999999 799999999999999999999999 89875543 2444431 0
Q ss_pred -ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeE
Q 024415 190 -PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 190 -pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~ 233 (268)
.|..+++.+.+.-. -+.|+||+.+|..| -+.|.+-.
T Consensus 625 ~qK~~IV~~lq~~g~----vVamtGDGvNDapA----Lk~ADVGI 661 (917)
T COG0474 625 EQKARIVEALQKSGH----VVAMTGDGVNDAPA----LKAADVGI 661 (917)
T ss_pred HHHHHHHHHHHhCCC----EEEEeCCCchhHHH----HHhcCccE
Confidence 23556666666633 35999999999999 88888743
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.012 Score=48.49 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=19.7
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGV 176 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl 176 (268)
+++|++++++|+++...+...++. +|+
T Consensus 28 ~~~Gi~~~~aTGR~~~~~~~~~~~-l~~ 54 (225)
T TIGR01482 28 ESVGIPVVLVTGNSVQFARALAKL-IGT 54 (225)
T ss_pred HHCCCEEEEEcCCchHHHHHHHHH-hCC
Confidence 467788888888777777777776 564
|
catalyze the same reaction as SPP. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.0099 Score=50.37 Aligned_cols=17 Identities=35% Similarity=0.436 Sum_probs=15.7
Q ss_pred CCceeEeecCccccCch
Q 024415 1 MADLYALDFDGVLCDSC 17 (268)
Q Consensus 1 M~~~viFD~DGTL~d~~ 17 (268)
|+|+|+||+||||++..
T Consensus 1 mikli~~DlDGTLl~~~ 17 (266)
T PRK10976 1 MYQVVASDLDGTLLSPD 17 (266)
T ss_pred CceEEEEeCCCCCcCCC
Confidence 78999999999999876
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.053 Score=49.65 Aligned_cols=62 Identities=8% Similarity=0.024 Sum_probs=42.6
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 106 EDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
...|+..++++.....+...++..+ +.|...+..++.| +++|+|..++-+++..++.++|++
T Consensus 72 ~f~Gl~~~die~vaRavlpkf~~~d---------v~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 72 ATAGVHESEIESVARAVLPKFYMDD---------VDMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HhCCCCHHHHHHHHHHHhhHHHHhh---------CCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 4456666666555556665555333 3444556667777 999999999999999999844553
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.014 Score=49.25 Aligned_cols=28 Identities=14% Similarity=0.311 Sum_probs=23.3
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
+++|++++++|+++...+...++. +++.
T Consensus 29 ~~~G~~~~iaTGR~~~~~~~~~~~-~~~~ 56 (256)
T TIGR00099 29 REKGIKVVLATGRPYKEVKNILKE-LGLD 56 (256)
T ss_pred HHCCCeEEEEeCCCHHHHHHHHHH-cCCC
Confidence 577899999999998888888888 6765
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.037 Score=47.13 Aligned_cols=66 Identities=6% Similarity=-0.152 Sum_probs=44.5
Q ss_pred hHHHHHHHHhcCCC---CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 191 KVEVLKQLQKKPEL---QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 191 k~~~~~~~~~~~~~---~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
|..+++.+++.+++ ++++++.|||+.+|+.| -+.+|. .|++.........+......++++....+
T Consensus 188 Kg~al~~l~~~lgi~~~~~~~viafGDs~NDi~M----l~~ag~-gvAM~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 188 KDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPL----LDVMDY-AVVVKGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHH----HHhCCE-EEEecCCCCCCcccccccCCceEeccCCC
Confidence 36788999999999 99999999999999999 889996 44444321121223222234556555443
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.019 Score=41.22 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=43.1
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCH---HHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEE
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~---~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
.++||+.++| +++|++++++||++. ......|+. .|+....+.|+++.. .+..++.+..+ ..++.+|
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~ts~~----~~~~~l~~~~~--~~~v~vl 86 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIITSGM----AAAEYLKEHKG--GKKVYVL 86 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEEHHH----HHHHHHHHHTT--SSEEEEE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEChHH----HHHHHHHhcCC--CCEEEEE
Confidence 5789999999 699999999999863 344555677 688755566665432 33444444322 4456777
Q ss_pred ecC
Q 024415 213 EDR 215 (268)
Q Consensus 213 GDs 215 (268)
|-.
T Consensus 87 G~~ 89 (101)
T PF13344_consen 87 GSD 89 (101)
T ss_dssp S-H
T ss_pred cCH
Confidence 754
|
... |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.065 Score=48.54 Aligned_cols=69 Identities=25% Similarity=0.334 Sum_probs=54.2
Q ss_pred HHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------CChHHHHHHHHhcCCCCCCcEEEEecCccch
Q 024415 148 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKPELQGMTLHFVEDRLATL 219 (268)
Q Consensus 148 L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di 219 (268)
|+++|.-++|+|-+....+..+..+ ..+-|..-+. .||.+-++.+.+++++-.+..+||+|++...
T Consensus 267 l~kqGVlLav~SKN~~~da~evF~k------hp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~Er 340 (574)
T COG3882 267 LKKQGVLLAVCSKNTEKDAKEVFRK------HPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAER 340 (574)
T ss_pred HHhccEEEEEecCCchhhHHHHHhh------CCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHH
Confidence 4799999999997777666666665 2333443332 2999999999999999999999999999877
Q ss_pred hcc
Q 024415 220 KNV 222 (268)
Q Consensus 220 ~~~ 222 (268)
+-+
T Consensus 341 E~v 343 (574)
T COG3882 341 ELV 343 (574)
T ss_pred HHH
Confidence 773
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.077 Score=51.16 Aligned_cols=98 Identities=18% Similarity=0.219 Sum_probs=72.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe----EEecCC-----------------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR----IYGLGT----------------------- 188 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~----i~~~~~----------------------- 188 (268)
||+|++.+.+ ++.|+++.++|+.....+..+-+. .|+...-+. .+++..
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 8999999988 799999999999999999999999 797544332 222211
Q ss_pred -CChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 189 -GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 189 -~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
..|.++++.+...-.+. .|-||+++|--+ -+.|.+ ++..|-+..+.-++
T Consensus 663 P~HK~kIVeaLq~~geiv----AMTGDGVNDApA----LK~AdI---GIAMG~~GTdVaKe 712 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVV----AMTGDGVNDAPA----LKKADI---GIAMGISGTDVAKE 712 (972)
T ss_pred chhHHHHHHHHHhcCCEE----EecCCCccchhh----hhhccc---ceeecCCccHhhHh
Confidence 02477888888887777 999999999999 788876 44455333334343
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.011 Score=50.42 Aligned_cols=46 Identities=9% Similarity=-0.118 Sum_probs=26.9
Q ss_pred HHHHHHHHhcCCCC-CCCeEE-ecCCCChHHHHHHHHhcCCCCCCcEEEEecCccch
Q 024415 165 FADALLRELAGVTI-PPDRIY-GLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATL 219 (268)
Q Consensus 165 ~~~~~l~~~~gl~~-~f~~i~-~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di 219 (268)
.++.+++. +|+.. ..+.++ -+|...+.++++... .. +.+|+...+.
T Consensus 191 al~~l~~~-lgi~~~~~~~viafGDs~NDi~Ml~~ag----~g----vAM~~~~~~~ 238 (271)
T PRK03669 191 AANWLIAT-YQQLSGTRPTTLGLGDGPNDAPLLDVMD----YA----VVVKGLNREG 238 (271)
T ss_pred HHHHHHHH-HHhhcCCCceEEEEcCCHHHHHHHHhCC----EE----EEecCCCCCC
Confidence 35556666 67721 234444 455557888887755 34 7888765443
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.06 Score=44.51 Aligned_cols=60 Identities=17% Similarity=0.099 Sum_probs=44.9
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
..+++.+.+.+++++++++.|||+.+|+.+ -+.+|.. |++. +..+.++.. .+++..+-.+
T Consensus 188 ~~ai~~l~~~~~i~~~~~~~~GD~~ND~~M----l~~~~~~-~am~---na~~~~k~~---a~~i~~~~~~ 247 (254)
T PF08282_consen 188 GSAIKYLLEYLGISPEDIIAFGDSENDIEM----LELAGYS-VAMG---NATPELKKA---ADYITPSNND 247 (254)
T ss_dssp HHHHHHHHHHHTTSGGGEEEEESSGGGHHH----HHHSSEE-EEET---TS-HHHHHH---SSEEESSGTC
T ss_pred HHHHHHHhhhcccccceeEEeecccccHhH----HhhcCeE-EEEc---CCCHHHHHh---CCEEecCCCC
Confidence 668899999999999999999999999999 8999875 4443 344566553 3466555443
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.022 Score=47.14 Aligned_cols=13 Identities=38% Similarity=0.427 Sum_probs=11.6
Q ss_pred eEeecCccccCch
Q 024415 5 YALDFDGVLCDSC 17 (268)
Q Consensus 5 viFD~DGTL~d~~ 17 (268)
|+||+||||++..
T Consensus 1 i~~DlDGTLl~~~ 13 (254)
T PF08282_consen 1 IFSDLDGTLLNSD 13 (254)
T ss_dssp EEEECCTTTCSTT
T ss_pred cEEEECCceecCC
Confidence 7899999999866
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.029 Score=47.36 Aligned_cols=43 Identities=12% Similarity=-0.049 Sum_probs=35.9
Q ss_pred hHHHHHHHHhcCCCC--CCcEEEEecCccchhcccccccccCCeEEEeec
Q 024415 191 KVEVLKQLQKKPELQ--GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 191 k~~~~~~~~~~~~~~--~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
|..+++++++.++++ ++++++|||+.+|+.+ .+.+|..++ +.+
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~M----l~~ag~~va-m~N 221 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPL----LEVVDLAVV-VPG 221 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHH----HHHCCEEEE-eCC
Confidence 467788888888888 9999999999999999 999997444 443
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.12 Score=40.06 Aligned_cols=88 Identities=15% Similarity=0.096 Sum_probs=49.2
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHH---HHHHHHhc---CCCCCCCeEEec-C---------C-CChHH-----H
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFA---DALLRELA---GVTIPPDRIYGL-G---------T-GPKVE-----V 194 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~---~~~l~~~~---gl~~~f~~i~~~-~---------~-~pk~~-----~ 194 (268)
.+||+.++. +++||++.-+|+.+-... +..|.. . |..-+.--++.+ + . .++|+ .
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~-~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQ-HQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHH-HHhCCccCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 446777777 699999999999875443 334444 2 222122223333 1 1 13444 3
Q ss_pred HHHHHhcCC-CCCCcEEEEecCccchhcccccccccCCe
Q 024415 195 LKQLQKKPE-LQGMTLHFVEDRLATLKNVIKEPELDGWN 232 (268)
Q Consensus 195 ~~~~~~~~~-~~~~~~l~IGDs~~Di~~~~~~A~~aG~~ 232 (268)
++.+...+. ....=..-.|++.+|+.+ =+++|+.
T Consensus 107 L~~l~~~f~~~~~pf~agfGN~~tDv~a----Y~~vGip 141 (157)
T PF08235_consen 107 LRDLRALFPPDGNPFYAGFGNRSTDVIA----YKAVGIP 141 (157)
T ss_pred HHHHHHhcCCCCCeEEEecCCcHHHHHH----HHHcCCC
Confidence 444444322 111111346788999999 8899983
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.053 Score=55.43 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=41.1
Q ss_pred HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 192 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.++++.+.+.. ..-+++|||+.+|+.| -+.|.+-. ++. |. +-.++.-..|+.+..+..|.+||
T Consensus 860 a~IV~~vk~~~---~~vtlaIGDGaNDv~m----Iq~AdVGI-GIs-G~----EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 860 AGIVALVKNRT---SDMTLAIGDGANDVSM----IQMADVGV-GIS-GQ----EGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred HHHHHHHHhcC---CcEEEEECCCcchHHH----HHhcCeee-eec-Cc----hhHHHHHhhccchhhhHHHHHHH
Confidence 44444444432 2346999999999999 78776532 432 32 22233335889999999999886
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.03 Score=47.66 Aligned_cols=64 Identities=20% Similarity=0.115 Sum_probs=50.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccccc---CCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD---GWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~a---G~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
.|..+++++.+.+++..+++++|||+.+|+.+ -+.+ |...|.|..+. ....+.+.++.++..+
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~m----f~~~~~~~g~~vavg~a~----------~~A~~~l~~~~~v~~~ 239 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAG----FAVVNRLGGISVKVGTGA----------TQASWRLAGVPDVWSW 239 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHH----HHHHHhcCCeEEEECCCC----------CcCeEeCCCHHHHHHH
Confidence 78999999999999999999999999999999 5655 34556664331 2345888899888776
Q ss_pred c
Q 024415 267 L 267 (268)
Q Consensus 267 l 267 (268)
|
T Consensus 240 L 240 (266)
T PRK10187 240 L 240 (266)
T ss_pred H
Confidence 6
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.07 Score=54.20 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=35.1
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
++.|++.+++ ++.|+++.++|+.+...+..+.+. .|+-
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 7999999999 799999999999999999999999 7984
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.04 Score=49.98 Aligned_cols=52 Identities=15% Similarity=-0.073 Sum_probs=43.3
Q ss_pred ChHHHHHHHHhcC---CCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 190 PKVEVLKQLQKKP---ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 190 pk~~~~~~~~~~~---~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
.|..+++++++.+ ++++++++.+||+.+|+.+ -+.+|...|++.+ ..+++++
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleM----l~~ag~~gvam~N---A~~elk~ 229 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAEL----FSVPDVYGVMVSN---AQEELLQ 229 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHH----HhcCCCCEEEEcC---CcHHHHH
Confidence 7899999999998 9999999999999999999 8888865666653 3345554
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.33 Score=40.58 Aligned_cols=145 Identities=14% Similarity=0.127 Sum_probs=78.5
Q ss_pred HHhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHH
Q 024415 93 ILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADAL 169 (268)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~ 169 (268)
...+|++..-.++...++..+.+.+.+. .....+++|+.+++ +++++|+.|+|.+-...++.+
T Consensus 58 ~M~EWw~kah~llv~~~l~k~~i~~~V~--------------~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~v 123 (246)
T PF05822_consen 58 HMEEWWTKAHELLVEQGLTKSEIEEAVK--------------ESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEV 123 (246)
T ss_dssp HHHHHHHHHHHHHHHHT-BGGGHHHHHH--------------CS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcCHHHHHHHHH--------------hcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHH
Confidence 3456766666777777777666433221 23457899999998 699999999999999999999
Q ss_pred HHHhcCCCCCCCeEEecC-----C-------CC------hH-HHHH--HHHhcCCCCCCcEEEEecCccchhcccccccc
Q 024415 170 LRELAGVTIPPDRIYGLG-----T-------GP------KV-EVLK--QLQKKPELQGMTLHFVEDRLATLKNVIKEPEL 228 (268)
Q Consensus 170 l~~~~gl~~~f~~i~~~~-----~-------~p------k~-~~~~--~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~ 228 (268)
|++ .|....--.|++.- . +| |- ..+. ...+. --...+++..|||..|+.+ |..
T Consensus 124 L~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~~-~~~R~NvlLlGDslgD~~M----a~G 197 (246)
T PF05822_consen 124 LRQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALEDSPYFKQ-LKKRTNVLLLGDSLGDLHM----ADG 197 (246)
T ss_dssp HHH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTTHHHHHC-TTT--EEEEEESSSGGGGT----TTT
T ss_pred HHH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccCchHHHH-hccCCcEEEecCccCChHh----hcC
Confidence 999 66532222234321 1 12 21 1221 11111 2356789999999999999 766
Q ss_pred c-CC---eEEEeecCCCCHHHHHhhcCCCCEEEc
Q 024415 229 D-GW---NLYLGDWGYNTQKEREEAASIPRIQLL 258 (268)
Q Consensus 229 a-G~---~~v~v~~g~~~~~~~~~~~~~p~~~~~ 258 (268)
. .. -.|+.... +-.+.+...-..=|+++.
T Consensus 198 ~~~~~~~lkIGFLn~-~ve~~l~~Y~~~yDIVlv 230 (246)
T PF05822_consen 198 VPDEENVLKIGFLND-KVEENLEKYLEAYDIVLV 230 (246)
T ss_dssp -S--SEEEEEEEE-S-SHHHHHHHHHCCSSEEEE
T ss_pred CCccccEEEEEeccc-CHHHHHHHHHhcCCEEEE
Confidence 6 32 33444443 223334444344455544
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.076 Score=44.16 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=27.4
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEe
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG 185 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~ 185 (268)
+++|++++++|+++...+...++. +++. ..+.+++
T Consensus 27 ~~~gi~~viaTGR~~~~v~~~~~~-l~l~-~~~~~I~ 61 (236)
T TIGR02471 27 SGDAVGFGIATGRSVESAKSRYAK-LNLP-SPDVLIA 61 (236)
T ss_pred cCCCceEEEEeCCCHHHHHHHHHh-CCCC-CCCEEEE
Confidence 577899999999999999999998 6775 3444443
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.41 Score=39.75 Aligned_cols=79 Identities=11% Similarity=0.054 Sum_probs=60.4
Q ss_pred EEEEcCC-CHHHHHHHHHHhcCCCCCC--CeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCC
Q 024415 155 IYIVTTK-QSRFADALLRELAGVTIPP--DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 155 i~ivTn~-~~~~~~~~l~~~~gl~~~f--~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~ 231 (268)
-++||+. --...-++|- +||...| +.|+++-.-.|...|+++..+++-+...-++|||+..--.+ |+..+|
T Consensus 178 NvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~a----Ak~l~w 251 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTA----AQAMNW 251 (274)
T ss_pred EEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHH----HHhcCC
Confidence 3555554 3444444444 5787666 45777655589999999999999977889999999999899 999999
Q ss_pred eEEEeecC
Q 024415 232 NLYLGDWG 239 (268)
Q Consensus 232 ~~v~v~~g 239 (268)
+++-+...
T Consensus 252 PFw~I~~h 259 (274)
T TIGR01658 252 PFVKIDLH 259 (274)
T ss_pred CeEEeecC
Confidence 99988754
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.022 Score=48.09 Aligned_cols=43 Identities=12% Similarity=-0.078 Sum_probs=26.5
Q ss_pred HHHHHHHhcCCCC-CCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCcc
Q 024415 166 ADALLRELAGVTI-PPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLA 217 (268)
Q Consensus 166 ~~~~l~~~~gl~~-~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~ 217 (268)
++.+++. +|+.. .-+.+..+|...+.++++..... +.+|+...
T Consensus 181 i~~l~~~-~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~--------vam~Na~~ 224 (256)
T TIGR01486 181 ANALKQF-YNQPGGAIKVVGLGDSPNDLPLLEVVDLA--------VVVPGPNG 224 (256)
T ss_pred HHHHHHH-HhhcCCCceEEEEcCCHhhHHHHHHCCEE--------EEeCCCCC
Confidence 4556666 67642 23445555666788888865543 77787653
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.078 Score=49.35 Aligned_cols=77 Identities=18% Similarity=0.224 Sum_probs=60.4
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
++.|++.+++ ++.|+++.++|+.....+....+. .|+ ++.-. .-|.+.++.+.... ..+.||||
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~~g----~~v~~vGD 414 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQKKG----RVVAMTGD 414 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHHCC----CEEEEECC
Confidence 7889999998 689999999999999999999998 786 22211 14567777775443 55799999
Q ss_pred CccchhcccccccccCC
Q 024415 215 RLATLKNVIKEPELDGW 231 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~ 231 (268)
+.+|..+ -+.+++
T Consensus 415 g~nD~~a----l~~Adv 427 (499)
T TIGR01494 415 GVNDAPA----LKKADV 427 (499)
T ss_pred ChhhHHH----HHhCCC
Confidence 9999999 676764
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.15 Score=39.11 Aligned_cols=51 Identities=16% Similarity=0.062 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhcCC-CCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHH
Q 024415 190 PKVEVLKQLQKKPE-LQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQK 244 (268)
Q Consensus 190 pk~~~~~~~~~~~~-~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~ 244 (268)
...|.++++...-. .++.+++||||.. .||.. |...|--.||...|....+
T Consensus 122 ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~----aN~mGs~gVw~~~gv~~~~ 174 (190)
T KOG2961|consen 122 CTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVY----ANRMGSLGVWTEPGVRAEE 174 (190)
T ss_pred ccHHHHHHHhCCcccCChhHeEEEccchhhhHhh----hhhccceeEEecccccccc
Confidence 34778888776544 4689999999996 79999 9999999999998865443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.028 Score=47.20 Aligned_cols=40 Identities=15% Similarity=-0.041 Sum_probs=34.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEec----CccchhcccccccccCCeEEEee
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGD----s~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
.|..+++.+.+. +++++.||| +.+|+.+ -+.++...+.|.
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieM----l~~~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEI----YNDPRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhh----hhcCCCceEEeC
Confidence 789999999988 589999999 8999999 777777666665
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.15 Score=43.60 Aligned_cols=70 Identities=14% Similarity=0.206 Sum_probs=44.6
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCC---HHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~---~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
++||+.++| +++|++++++||++ +......++. +|+....+.|+++. .+...++.+......++++||
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts~-----~~~~~~l~~~~~~~~~v~~iG 92 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSSA-----LCAARLLRQPPDAPKAVYVIG 92 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecHH-----HHHHHHHHhhCcCCCEEEEEc
Confidence 678888888 68999999999965 3344456777 68865555555432 233333333222345678888
Q ss_pred cC
Q 024415 214 DR 215 (268)
Q Consensus 214 Ds 215 (268)
+.
T Consensus 93 ~~ 94 (279)
T TIGR01452 93 EE 94 (279)
T ss_pred CH
Confidence 75
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.038 Score=45.79 Aligned_cols=41 Identities=15% Similarity=0.042 Sum_probs=35.8
Q ss_pred ChHHHHHHHHhcCCC--CCCcEEEEecCccchhcccccccccCCeEE
Q 024415 190 PKVEVLKQLQKKPEL--QGMTLHFVEDRLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 190 pk~~~~~~~~~~~~~--~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v 234 (268)
.|+.+++.+.+..++ .++++++|||+.+|+.+ .+.+|+.++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~m----l~~ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPM----FEVVDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHH----HHhCCCcEe
Confidence 889999999888766 67799999999999999 999998544
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.056 Score=45.45 Aligned_cols=44 Identities=14% Similarity=-0.037 Sum_probs=36.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeec
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
.|..+++++..+.++++++++.+|||.+|+.+ - ..+...|.|.+
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~m----L-~~~~~~vvV~N 208 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEM----L-EGGDHGVVVGN 208 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHH----H-CCSSEEEE-TT
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHH----H-cCcCCEEEEcC
Confidence 68999999999999999999999999999999 5 66667887764
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.12 Score=49.20 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=13.9
Q ss_pred CceeEeecCccccCch
Q 024415 2 ADLYALDFDGVLCDSC 17 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~ 17 (268)
.|+|++|+||||++..
T Consensus 416 ~KLIfsDLDGTLLd~d 431 (694)
T PRK14502 416 KKIVYTDLDGTLLNPL 431 (694)
T ss_pred eeEEEEECcCCCcCCC
Confidence 3689999999999866
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.029 Score=42.00 Aligned_cols=15 Identities=13% Similarity=0.220 Sum_probs=13.1
Q ss_pred ceeEeecCccccCch
Q 024415 3 DLYALDFDGVLCDSC 17 (268)
Q Consensus 3 ~~viFD~DGTL~d~~ 17 (268)
|+|+||+||||++..
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 899999999998654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.031 Score=43.49 Aligned_cols=81 Identities=16% Similarity=0.109 Sum_probs=54.2
Q ss_pred CCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCC-CCCCCeEEecCCC---ChHHHHHHHHhcCCCCCCcEEE
Q 024415 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV-TIPPDRIYGLGTG---PKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 138 ~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl-~~~f~~i~~~~~~---pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
..++||+.++|+ +..+.++|.|.+....++.+++. +.- ...|+.++..+.. .... .+.+ ...+...+++|+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~-~KdL-~~l~~~~~~vvi 111 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY-IKDL-SKLGRDLDNVVI 111 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE-E--G-GGSSS-GGGEEE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc-ccch-HHHhhccccEEE
Confidence 457899999993 66699999999999999999999 554 4678888877642 1111 2222 233557899999
Q ss_pred EecCccchhc
Q 024415 212 VEDRLATLKN 221 (268)
Q Consensus 212 IGDs~~Di~~ 221 (268)
|+|++.-...
T Consensus 112 vDD~~~~~~~ 121 (159)
T PF03031_consen 112 VDDSPRKWAL 121 (159)
T ss_dssp EES-GGGGTT
T ss_pred EeCCHHHeec
Confidence 9999875544
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.11 Score=44.23 Aligned_cols=14 Identities=29% Similarity=0.553 Sum_probs=12.1
Q ss_pred eeEeecCccccCch
Q 024415 4 LYALDFDGVLCDSC 17 (268)
Q Consensus 4 ~viFD~DGTL~d~~ 17 (268)
+|+||+||||++..
T Consensus 16 li~~D~DGTLl~~~ 29 (266)
T PRK10187 16 AWFFDLDGTLAEIK 29 (266)
T ss_pred EEEEecCCCCCCCC
Confidence 79999999999743
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.24 Score=41.54 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=21.7
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
+++|+.++++|+++...+...++. +++.
T Consensus 34 ~~~gi~fv~aTGR~~~~~~~~~~~-~~~~ 61 (249)
T TIGR01485 34 RGEDSLLVYSTGRSPHSYKELQKQ-KPLL 61 (249)
T ss_pred hccCceEEEEcCCCHHHHHHHHhc-CCCC
Confidence 577788888888888888888777 5654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.067 Score=44.93 Aligned_cols=40 Identities=18% Similarity=-0.079 Sum_probs=35.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEec----CccchhcccccccccCCeEEEeec
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGD----s~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
.|..+++.++ ++++++.+|| +.+|+++ -+.-|+.++.|+.
T Consensus 189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eM----l~~~~~~~~~~~~ 232 (245)
T PLN02423 189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEI----FESERTIGHTVTS 232 (245)
T ss_pred CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHH----HhCCCcceEEeCC
Confidence 7899999998 8899999999 7999999 7777988888863
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.095 Score=42.74 Aligned_cols=86 Identities=15% Similarity=-0.028 Sum_probs=45.5
Q ss_pred HcCCCeEEEEcCCCHH---HHHHHHHHhcCCC----CCCCeEEecCCCChHHHHHHHHhcCCC-CCC-cEEEEecCccch
Q 024415 149 KFASSRIYIVTTKQSR---FADALLRELAGVT----IPPDRIYGLGTGPKVEVLKQLQKKPEL-QGM-TLHFVEDRLATL 219 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~---~~~~~l~~~~gl~----~~f~~i~~~~~~pk~~~~~~~~~~~~~-~~~-~~l~IGDs~~Di 219 (268)
..+-|...|++-+..+ .....|.. .|+. -.|-.+.+... .|..+.+.+.+.+.. .+. -++-+||+++|+
T Consensus 145 ~~rEyseti~~rs~d~~~~~~~~~L~e-~glt~v~garf~~v~~as~-gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~ 222 (274)
T COG3769 145 MLREYSETIIWRSSDERMAQFTARLNE-RGLTFVHGARFWHVLDASA-GKGQAANWLLETYRRLGGARTTLGLGDGPNDA 222 (274)
T ss_pred HHHHhhhheeecccchHHHHHHHHHHh-cCceEEeccceEEEecccc-CccHHHHHHHHHHHhcCceeEEEecCCCCCcc
Confidence 4555666666643333 13344555 4664 22333344333 344555554443332 122 479999999999
Q ss_pred hcccccccccCCeEEEeecCCCC
Q 024415 220 KNVIKEPELDGWNLYLGDWGYNT 242 (268)
Q Consensus 220 ~~~~~~A~~aG~~~v~v~~g~~~ 242 (268)
-. -..+..++.|. |+|.
T Consensus 223 Pl-----~ev~d~AfiV~-~lnr 239 (274)
T COG3769 223 PL-----LEVMDYAFIVK-GLNR 239 (274)
T ss_pred cH-----HHhhhhheeec-ccch
Confidence 88 45566666554 3443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.03 E-value=2.2 Score=43.48 Aligned_cols=52 Identities=13% Similarity=-0.023 Sum_probs=35.8
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+.-++.|||+.+|+-| .+.|.+ .|++. | ++-.++.-.+|+-+..+.-|.++|
T Consensus 794 ~~~TLAIGDGANDVsM----IQ~AhV-GVGIs-G----~EGmQAvmsSD~AIaqFrfL~rLL 845 (1151)
T KOG0206|consen 794 KAVTLAIGDGANDVSM----IQEAHV-GVGIS-G----QEGMQAVMSSDFAIAQFRFLERLL 845 (1151)
T ss_pred CceEEEeeCCCccchh----eeeCCc-Ceeec-c----chhhhhhhcccchHHHHHHHhhhh
Confidence 3446999999999999 787765 23332 2 233344456889888888887775
|
|
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.69 Score=38.68 Aligned_cols=94 Identities=14% Similarity=0.112 Sum_probs=74.2
Q ss_pred CCCCCChHHHHH------cCCCeEEEEcCCCHHHHHHHHHHhcCCCC--CCCeEEecCCC-ChHHHHHHHHhcCCCCCCc
Q 024415 138 NRFYPGIPDALK------FASSRIYIVTTKQSRFADALLRELAGVTI--PPDRIYGLGTG-PKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 138 ~~~~pg~~e~L~------~~g~~i~ivTn~~~~~~~~~l~~~~gl~~--~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~ 208 (268)
..++|+..++|+ +.|+.+.-.+|.+...+++..+ .|-.- +.-.-+++..| .+|..++.+.+.+.++
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~vp--- 191 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKIP--- 191 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCCc---
Confidence 478999999992 8999999999998877666655 47541 12223445555 7899999999999999
Q ss_pred EEEEecC---ccchhcccccccccCCeEEEeecCCC
Q 024415 209 LHFVEDR---LATLKNVIKEPELDGWNLYLGDWGYN 241 (268)
Q Consensus 209 ~l~IGDs---~~Di~~~~~~A~~aG~~~v~v~~g~~ 241 (268)
++||=+ ++|+.. |...|++.|+++++--
T Consensus 192 -VivdAGIgt~sDa~~----AmElGaDgVL~nSaIa 222 (267)
T CHL00162 192 -VIIDAGIGTPSEASQ----AMELGASGVLLNTAVA 222 (267)
T ss_pred -EEEeCCcCCHHHHHH----HHHcCCCEEeecceee
Confidence 999976 479999 9999999999998853
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.56 Score=39.14 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=49.4
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC-----C----CCh----------HHHHHH
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----T----GPK----------VEVLKQ 197 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~-----~----~pk----------~~~~~~ 197 (268)
+..|+.++. .++++|+.|.|.+-...++.++.+..++. .+-.+++.- + +-+ ...++.
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~-pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~ 217 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLH-PNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQN 217 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccC-ccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHh
Confidence 345555555 79999999999999988888887733433 332233210 1 111 112222
Q ss_pred HHhcCC--CCCCcEEEEecCccchhc
Q 024415 198 LQKKPE--LQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 198 ~~~~~~--~~~~~~l~IGDs~~Di~~ 221 (268)
-...+. ....++++.||+..|+.+
T Consensus 218 ~s~yf~~~~~~~nVillGdsigdl~m 243 (298)
T KOG3128|consen 218 ESEYFHQLAGRVNVILLGDSIGDLHM 243 (298)
T ss_pred hhHHHhhccCCceEEEeccccccchh
Confidence 222222 245788999999999999
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.58 Score=42.33 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=72.3
Q ss_pred hccCCCCCChH--HHH---HcCCCeEEEEcCC--CHHHHHHHHHHhcCCCCCCCeEEec-CC---CChHHHHHHHHhcCC
Q 024415 135 IGANRFYPGIP--DAL---KFASSRIYIVTTK--QSRFADALLRELAGVTIPPDRIYGL-GT---GPKVEVLKQLQKKPE 203 (268)
Q Consensus 135 ~~~~~~~pg~~--e~L---~~~g~~i~ivTn~--~~~~~~~~l~~~~gl~~~f~~i~~~-~~---~pk~~~~~~~~~~~~ 203 (268)
++...++|..+ ++. .++|-+++++|.- +.+-.+..|.. +|....---++.+ +. +.....+..+.+..+
T Consensus 93 tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s-~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~En 171 (635)
T COG5610 93 TEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNS-FGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLEN 171 (635)
T ss_pred cceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHh-cCCCccCceeeecceeehhcccchHHHHHHhhcC
Confidence 44446777654 333 5899999999963 66667778888 7875333224544 32 466889999999999
Q ss_pred CCCCcEEEEecC-ccchhcccccccccCCeEEEe
Q 024415 204 LQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLG 236 (268)
Q Consensus 204 ~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v 236 (268)
++|...++|||. ..|... +++.|+.+...
T Consensus 172 Vd~~~w~H~GDN~~aD~l~----pk~LgI~Tlf~ 201 (635)
T COG5610 172 VDPKKWIHCGDNWVADYLK----PKNLGISTLFY 201 (635)
T ss_pred CChhheEEecCchhhhhcC----ccccchhHHHH
Confidence 999999999999 579999 99999977654
|
|
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=90.90 E-value=1.3 Score=36.85 Aligned_cols=95 Identities=15% Similarity=0.115 Sum_probs=68.5
Q ss_pred CCCCCChHHHH---H---cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC--eEEecCCC-ChHHHHHHHHhcCCCCCCc
Q 024415 138 NRFYPGIPDAL---K---FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTG-PKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 138 ~~~~pg~~e~L---~---~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~--~i~~~~~~-pk~~~~~~~~~~~~~~~~~ 208 (268)
..++|+..+++ + +.|+.+.-+++.+....+.+.+ +|-.-.-- .-+++..+ .+|+.++.+.+..+++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp--- 177 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP--- 177 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc---
Confidence 46899999999 3 5699999566666666665555 46542211 23444444 5799999998877777
Q ss_pred EEEEecC---ccchhcccccccccCCeEEEeecCCCC
Q 024415 209 LHFVEDR---LATLKNVIKEPELDGWNLYLGDWGYNT 242 (268)
Q Consensus 209 ~l~IGDs---~~Di~~~~~~A~~aG~~~v~v~~g~~~ 242 (268)
+++|=+ +.|+.. |...|++.|.++++...
T Consensus 178 -VI~egGI~tpeda~~----AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 178 -VIVDAGIGTPSDAAQ----AMELGADAVLLNTAIAK 209 (248)
T ss_pred -EEEeCCCCCHHHHHH----HHHcCCCEEEEChHhcC
Confidence 888855 579999 99999999999988643
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.39 Score=44.16 Aligned_cols=89 Identities=18% Similarity=0.137 Sum_probs=64.9
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC--ChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~--pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
.-||++|=. ++-|++.+.+|+.++.......+. .|++++.. +.+ .|.+.+++-+.+-.+. .|.||
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-----eatPEdK~~~I~~eQ~~grlV----AMtGD 517 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-----EATPEDKLALIRQEQAEGRLV----AMTGD 517 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-----cCChHHHHHHHHHHHhcCcEE----EEcCC
Confidence 558988766 799999999999999888888888 89977643 112 3566666666665565 99999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCH
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQ 243 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~ 243 (268)
+.+|--+ -..|.. .+++++|....
T Consensus 518 GTNDAPA----LAqAdV-g~AMNsGTqAA 541 (681)
T COG2216 518 GTNDAPA----LAQADV-GVAMNSGTQAA 541 (681)
T ss_pred CCCcchh----hhhcch-hhhhccccHHH
Confidence 9999888 444443 34677775433
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.56 E-value=2.6 Score=36.61 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=46.8
Q ss_pred CCCCCChHHHH---HcCC-CeEEEEcCCCHHHHHHHHHHhcCCC-------------CCCCeEEecCCCChHHHHHHHHh
Q 024415 138 NRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVT-------------IPPDRIYGLGTGPKVEVLKQLQK 200 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g-~~i~ivTn~~~~~~~~~l~~~~gl~-------------~~f~~i~~~~~~pk~~~~~~~~~ 200 (268)
..++|||.... .+.| .++..+||++-.....+-+- ++-. ..++.++.+..--|...+..+..
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~ef-i~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~ 273 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEF-ITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILR 273 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHH-HhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHHH
Confidence 45888988777 3444 78999999877553332222 2211 22344544433345566664554
Q ss_pred cCCCCCCcEEEEecC-ccchhc
Q 024415 201 KPELQGMTLHFVEDR-LATLKN 221 (268)
Q Consensus 201 ~~~~~~~~~l~IGDs-~~Di~~ 221 (268)
++.- .+.+.|||+ ..|.+.
T Consensus 274 ~~p~--~kfvLVGDsGE~DpeI 293 (373)
T COG4850 274 RYPD--RKFVLVGDSGEHDPEI 293 (373)
T ss_pred hCCC--ceEEEecCCCCcCHHH
Confidence 4332 356889998 678764
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=90.18 E-value=0.34 Score=41.00 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=35.7
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHH---HHHHHHHHhcCCCCCCCeEEecC
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGLG 187 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~---~~~~~l~~~~gl~~~f~~i~~~~ 187 (268)
++||+.++| +++|++++++||++.. .....++. +|+..-.+.|+++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcHH
Confidence 678999999 6899999999997554 46666777 68865556676653
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.46 Score=46.46 Aligned_cols=64 Identities=13% Similarity=-0.067 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.|..+++.+.+ +..++.++++||+.+|+.+ -+.++...+.|.-|. .. +..++.+.+..++.++|
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~M----f~~~~~~~~~v~vG~-~~-------s~A~~~l~~~~eV~~~L 720 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDM----FRALPETAITVKVGP-GE-------SRARYRLPSQREVRELL 720 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHH----HHhcccCceEEEECC-CC-------CcceEeCCCHHHHHHHH
Confidence 78999999988 7788899999999999999 666542233333342 11 34568889888877765
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.57 E-value=2.4 Score=37.54 Aligned_cols=83 Identities=14% Similarity=0.021 Sum_probs=57.9
Q ss_pred cCCCeEEEEcCCCHHHHHHHHHHhcCCCCC--CCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccc
Q 024415 150 FASSRIYIVTTKQSRFADALLRELAGVTIP--PDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 150 ~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~--f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~ 227 (268)
+.+---++||+...-.....+-. +||... .+.|++...-.|...|+++..++|- .-.-+.|||+...-.+ |+
T Consensus 368 r~ncvnVlvTttqLipalaKvLL-~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~a----AK 441 (468)
T KOG3107|consen 368 RKNCVNVLVTTTQLIPALAKVLL-YGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQA----AK 441 (468)
T ss_pred ccceeEEEEeccchhHHHHHHHH-HhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHH----HH
Confidence 33434566676544332222222 466644 4567777655899999999999998 4667889999999999 99
Q ss_pred ccCCeEEEeec
Q 024415 228 LDGWNLYLGDW 238 (268)
Q Consensus 228 ~aG~~~v~v~~ 238 (268)
+..|+++-++.
T Consensus 442 ~ln~PfwrI~~ 452 (468)
T KOG3107|consen 442 ALNMPFWRISS 452 (468)
T ss_pred hhCCceEeecc
Confidence 99998877653
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=89.34 E-value=0.65 Score=46.10 Aligned_cols=67 Identities=15% Similarity=0.065 Sum_probs=44.7
Q ss_pred ChHHHHHHHHh---cCCCCCCcEEEEecCccchhcccccccccCC-----------eEEEeecCCCCHHHHHhhcCCCCE
Q 024415 190 PKVEVLKQLQK---KPELQGMTLHFVEDRLATLKNVIKEPELDGW-----------NLYLGDWGYNTQKEREEAASIPRI 255 (268)
Q Consensus 190 pk~~~~~~~~~---~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~-----------~~v~v~~g~~~~~~~~~~~~~p~~ 255 (268)
.|..+++.+.+ ..+..++.+++|||..+|..+ -+.++- ..+.|.=|.. . +...+
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedM----F~~~~~~~~g~~~~~~~~~~~v~VG~~------~--S~A~y 829 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDM----FEVITSSMAGPSIAPRAEVFACTVGQK------P--SKAKY 829 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHH----HHHhhhhccCCcccccccceeEEECCC------C--ccCeE
Confidence 45777777764 467889999999999999999 443331 1223332321 1 34558
Q ss_pred EEcCHhHHHhhcC
Q 024415 256 QLLQLSDFSRKLK 268 (268)
Q Consensus 256 ~~~~~~~l~~~l~ 268 (268)
.+.+..++.++|+
T Consensus 830 ~L~d~~eV~~lL~ 842 (854)
T PLN02205 830 YLDDTAEIVRLMQ 842 (854)
T ss_pred ecCCHHHHHHHHH
Confidence 8999999888774
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.29 E-value=0.69 Score=41.41 Aligned_cols=70 Identities=19% Similarity=0.035 Sum_probs=47.8
Q ss_pred ChHHHHHHHHhcCCCCCCc---EEEEecCccchhccccccc-ccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHh
Q 024415 190 PKVEVLKQLQKKPELQGMT---LHFVEDRLATLKNVIKEPE-LDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 265 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~---~l~IGDs~~Di~~~~~~A~-~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~ 265 (268)
.|..+++.+++.+++...+ .++|||..+|..+.+.+.. ..|+ .|.|..+.. + ....+.+.+..++.+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~---~-----t~A~y~L~dp~eV~~ 371 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPK---E-----SNAFYSLRDPSEVME 371 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCC---C-----ccceEEcCCHHHHHH
Confidence 7899999999999887653 3899999999999322211 1343 455554321 1 234599999999887
Q ss_pred hcC
Q 024415 266 KLK 268 (268)
Q Consensus 266 ~l~ 268 (268)
+|+
T Consensus 372 ~L~ 374 (384)
T PLN02580 372 FLK 374 (384)
T ss_pred HHH
Confidence 763
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.99 E-value=0.93 Score=38.83 Aligned_cols=86 Identities=20% Similarity=0.385 Sum_probs=51.7
Q ss_pred HHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHh--cCCCC-CCCeEEecCCCChHHHHHH
Q 024415 124 DEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLREL--AGVTI-PPDRIYGLGTGPKVEVLKQ 197 (268)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~--~gl~~-~f~~i~~~~~~pk~~~~~~ 197 (268)
-....++...|. ...+.||+.+.+ ++.|.++.++||++....+..++++ +|+.. --+.|++ |...+..+
T Consensus 24 tfifDcDGVlW~-g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~s----sa~~~a~y 98 (306)
T KOG2882|consen 24 TFIFDCDGVLWL-GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFS----SAYAIADY 98 (306)
T ss_pred EEEEcCCcceee-cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccC----hHHHHHHH
Confidence 334455556676 557889999998 7999999999999877666665541 35542 1122222 44455555
Q ss_pred HHhcCCCCCCcEEEEecC
Q 024415 198 LQKKPELQGMTLHFVEDR 215 (268)
Q Consensus 198 ~~~~~~~~~~~~l~IGDs 215 (268)
+.... ...+.+..+|-.
T Consensus 99 lk~~~-~~~k~Vyvig~~ 115 (306)
T KOG2882|consen 99 LKKRK-PFGKKVYVIGEE 115 (306)
T ss_pred HHHhC-cCCCeEEEecch
Confidence 54433 333455555533
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=88.28 E-value=0.22 Score=35.71 Aligned_cols=13 Identities=38% Similarity=0.810 Sum_probs=11.5
Q ss_pred eEeecCccccCch
Q 024415 5 YALDFDGVLCDSC 17 (268)
Q Consensus 5 viFD~DGTL~d~~ 17 (268)
++||+||||++..
T Consensus 1 ~l~D~dGvl~~g~ 13 (101)
T PF13344_consen 1 FLFDLDGVLYNGN 13 (101)
T ss_dssp EEEESTTTSEETT
T ss_pred CEEeCccEeEeCC
Confidence 6899999999766
|
... |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=88.11 E-value=0.21 Score=38.76 Aligned_cols=15 Identities=40% Similarity=0.623 Sum_probs=12.5
Q ss_pred ceeEeecCccccCch
Q 024415 3 DLYALDFDGVLCDSC 17 (268)
Q Consensus 3 ~~viFD~DGTL~d~~ 17 (268)
|+++||+||||+.+.
T Consensus 1 k~LVlDLD~TLv~~~ 15 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSS 15 (159)
T ss_dssp EEEEEE-CTTTEEEE
T ss_pred CEEEEeCCCcEEEEe
Confidence 579999999999877
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.07 E-value=2.7 Score=37.54 Aligned_cols=93 Identities=14% Similarity=0.194 Sum_probs=65.6
Q ss_pred hHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcC--CCCCCCeEEecCCCC-------------------------------
Q 024415 144 IPDALKFASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLGTGP------------------------------- 190 (268)
Q Consensus 144 ~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~g--l~~~f~~i~~~~~~p------------------------------- 190 (268)
....++..|.++.++||+.-......+...+| ...+|+.++....+|
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~ 285 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQG 285 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhc
Confidence 33344899999999999999888888876444 456788776553211
Q ss_pred ---hHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecC
Q 024415 191 ---KVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 191 ---k~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
.+.....++...+....++++|||+. .||.-. -+.-|+.+++|...
T Consensus 286 ~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~s---kk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 286 GVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVS---KKRRGWRTVLVAPE 335 (424)
T ss_pred ccCCcchHHHHHHHhcccccceeecccceeeeEEec---ceecceEEEEEehh
Confidence 13344555556666668889999996 688775 45689999887643
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=87.73 E-value=0.38 Score=38.81 Aligned_cols=14 Identities=43% Similarity=0.655 Sum_probs=11.8
Q ss_pred eeEeecCccccCch
Q 024415 4 LYALDFDGVLCDSC 17 (268)
Q Consensus 4 ~viFD~DGTL~d~~ 17 (268)
+|+||+||||++..
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 48999999999754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=87.67 E-value=3.2 Score=34.67 Aligned_cols=95 Identities=15% Similarity=0.101 Sum_probs=67.2
Q ss_pred CCCCCChHHHH---H---cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC--eEEecCCC-ChHHHHHHHHhcCCCCCCc
Q 024415 138 NRFYPGIPDAL---K---FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTG-PKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 138 ~~~~pg~~e~L---~---~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~--~i~~~~~~-pk~~~~~~~~~~~~~~~~~ 208 (268)
..++|+..+++ + +.|+.+.-+++.+....+.+.+ +|-.-.-- .-+++..+ .+|+.++.+.+..+++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~vp--- 177 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADVP--- 177 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCCe---
Confidence 36789999999 3 5599999555555555555554 46542211 33444444 5799999998877777
Q ss_pred EEEEecC---ccchhcccccccccCCeEEEeecCCCC
Q 024415 209 LHFVEDR---LATLKNVIKEPELDGWNLYLGDWGYNT 242 (268)
Q Consensus 209 ~l~IGDs---~~Di~~~~~~A~~aG~~~v~v~~g~~~ 242 (268)
+++|=+ +.|+.. |...|++.|.++++...
T Consensus 178 -VIveaGI~tpeda~~----AmelGAdgVlV~SAItk 209 (250)
T PRK00208 178 -VIVDAGIGTPSDAAQ----AMELGADAVLLNTAIAV 209 (250)
T ss_pred -EEEeCCCCCHHHHHH----HHHcCCCEEEEChHhhC
Confidence 888855 479999 99999999999988643
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=87.65 E-value=3.5 Score=35.92 Aligned_cols=94 Identities=15% Similarity=0.198 Sum_probs=69.5
Q ss_pred CCCCCChHHHH---H---cCCCeEEEEcCCCHHHHHHHHHHhcCCC--CCCCeEEecCCC-ChHHHHHHHHhcCCCCCCc
Q 024415 138 NRFYPGIPDAL---K---FASSRIYIVTTKQSRFADALLRELAGVT--IPPDRIYGLGTG-PKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 138 ~~~~pg~~e~L---~---~~g~~i~ivTn~~~~~~~~~l~~~~gl~--~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~ 208 (268)
..++|+..+++ + +.|+.+.++++.+...++...+ +|-. .+.-.-+++..+ .+|+.++.+.+.+.++
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~avmPl~~pIGsg~gv~~p~~i~~~~e~~~vp--- 251 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVAVMPLGAPIGSGLGIQNPYTIRLIVEGATVP--- 251 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEEEeeccccccCCCCCCCHHHHHHHHHcCCCc---
Confidence 36889999999 3 5599996677666666665555 4541 011233444444 7999999999998888
Q ss_pred EEEEecC---ccchhcccccccccCCeEEEeecCCC
Q 024415 209 LHFVEDR---LATLKNVIKEPELDGWNLYLGDWGYN 241 (268)
Q Consensus 209 ~l~IGDs---~~Di~~~~~~A~~aG~~~v~v~~g~~ 241 (268)
++||=+ .+|+.. |...|++.|+++++--
T Consensus 252 -VivdAGIg~~sda~~----AmelGadgVL~nSaIa 282 (326)
T PRK11840 252 -VLVDAGVGTASDAAV----AMELGCDGVLMNTAIA 282 (326)
T ss_pred -EEEeCCCCCHHHHHH----HHHcCCCEEEEcceec
Confidence 999977 469999 9999999999998854
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.26 E-value=6.2 Score=38.79 Aligned_cols=105 Identities=23% Similarity=0.229 Sum_probs=69.3
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC--eEEec-CC-----------CCh----------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGL-GT-----------GPK---------- 191 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~--~i~~~-~~-----------~pk---------- 191 (268)
|.+||+++.+ ++.|+.+-.||+.+-..++..... .|+...-+ .+..+ +- -||
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 7889999999 699999999999999999999998 89864443 22222 20 033
Q ss_pred --HHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc
Q 024415 192 --VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 258 (268)
Q Consensus 192 --~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~ 258 (268)
...++-+.+. .+=+.+-||+.+|-.+ -+.|.+ ++..|-...+.-++ ..|+++.
T Consensus 726 DK~lLVk~L~~~----g~VVAVTGDGTNDaPA----LkeADV---GlAMGIaGTeVAKE---aSDIIi~ 780 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQ----GEVVAVTGDGTNDAPA----LKEADV---GLAMGIAGTEVAKE---ASDIIIL 780 (1034)
T ss_pred hHHHHHHHHHhc----CcEEEEecCCCCCchh----hhhccc---chhccccchhhhhh---hCCeEEE
Confidence 2233444422 2334677999999999 788876 33445433334343 4666654
|
|
| >COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.83 E-value=4 Score=33.72 Aligned_cols=93 Identities=18% Similarity=0.157 Sum_probs=73.1
Q ss_pred CCCCCChHHHHH------cCCCeEEEEcCCCHHHHHHHHHHhcCCCC--CCCeEEecCCC-ChHHHHHHHHhcCCCCCCc
Q 024415 138 NRFYPGIPDALK------FASSRIYIVTTKQSRFADALLRELAGVTI--PPDRIYGLGTG-PKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 138 ~~~~pg~~e~L~------~~g~~i~ivTn~~~~~~~~~l~~~~gl~~--~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~ 208 (268)
..+.|+..++|+ +.|+.+...|+.+.-.+++..+ .|..- +...-+++..| -+++.++.+.++..++
T Consensus 110 ~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee--~GcaavMPl~aPIGSg~G~~n~~~l~iiie~a~VP--- 184 (262)
T COG2022 110 KTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEE--AGCAAVMPLGAPIGSGLGLQNPYNLEIIIEEADVP--- 184 (262)
T ss_pred cccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHh--cCceEeccccccccCCcCcCCHHHHHHHHHhCCCC---
Confidence 479999999993 8999999999999877777666 46532 22233455555 6799999999999999
Q ss_pred EEEEecC---ccchhcccccccccCCeEEEeecCC
Q 024415 209 LHFVEDR---LATLKNVIKEPELDGWNLYLGDWGY 240 (268)
Q Consensus 209 ~l~IGDs---~~Di~~~~~~A~~aG~~~v~v~~g~ 240 (268)
+.|+-+ ++|... |...|++.|++++..
T Consensus 185 -viVDAGiG~pSdAa~----aMElG~DaVL~NTAi 214 (262)
T COG2022 185 -VIVDAGIGTPSDAAQ----AMELGADAVLLNTAI 214 (262)
T ss_pred -EEEeCCCCChhHHHH----HHhcccceeehhhHh
Confidence 888866 478888 999999999998754
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.12 E-value=1.3 Score=37.22 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=34.6
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHH---HHHHHHHhcCCCCCCCeEEec
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL 186 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~---~~~~l~~~~gl~~~f~~i~~~ 186 (268)
++||+.++| +++|.+++++||++... ....|.. .|+.-..+.|+++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~-~G~~~~~~~i~ts 69 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTS 69 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHhhEecH
Confidence 679999998 68999999999987643 4445666 5886556667665
|
|
| >PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences | Back alignment and domain information |
|---|
Probab=85.18 E-value=1.4 Score=36.46 Aligned_cols=92 Identities=15% Similarity=0.119 Sum_probs=61.7
Q ss_pred CCCCCChHHHH------HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCC--CCeEEecCCC-ChHHHHHHHHhcCCCCCCc
Q 024415 138 NRFYPGIPDAL------KFASSRIYIVTTKQSRFADALLRELAGVTIP--PDRIYGLGTG-PKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 138 ~~~~pg~~e~L------~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~--f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~ 208 (268)
..++|+..+++ -+.|+.+.-.+|.+...+++..+ .|..-. .-.-+++..| -++..++.+.++.+++
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d--~GcaavMPlgsPIGSg~Gi~n~~~l~~i~~~~~vP--- 177 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGRGIQNPYNLRIIIERADVP--- 177 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHH--TT-SEBEEBSSSTTT---SSTHHHHHHHHHHGSSS---
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--CCCCEEEecccccccCcCCCCHHHHHHHHHhcCCc---
Confidence 46889999999 28999999999988877766666 475311 1112233334 7799999999999999
Q ss_pred EEEEecC---ccchhcccccccccCCeEEEeecC
Q 024415 209 LHFVEDR---LATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 209 ~l~IGDs---~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
+.|+-+ ++|..- |...|++.|++++.
T Consensus 178 -vIvDAGiG~pSdaa~----AMElG~daVLvNTA 206 (247)
T PF05690_consen 178 -VIVDAGIGTPSDAAQ----AMELGADAVLVNTA 206 (247)
T ss_dssp -BEEES---SHHHHHH----HHHTT-SEEEESHH
T ss_pred -EEEeCCCCCHHHHHH----HHHcCCceeehhhH
Confidence 888766 479988 99999999999875
|
ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=84.68 E-value=0.96 Score=37.92 Aligned_cols=35 Identities=11% Similarity=-0.030 Sum_probs=22.4
Q ss_pred eEEEeec----CCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 232 NLYLGDW----GYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 232 ~~v~v~~----g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.++++.- ++|.-+=++..+. +...+.+++|...+|
T Consensus 202 e~~aFGD~~~~~~ND~eMl~~~~~-~~~~~~~~~~~~~~~ 240 (245)
T PLN02423 202 EIHFFGDKTYEGGNDHEIFESERT-IGHTVTSPDDTREQC 240 (245)
T ss_pred eEEEEeccCCCCCCcHHHHhCCCc-ceEEeCCHHHHHHHH
Confidence 4566655 5665544543233 568899999977765
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=84.55 E-value=1.5 Score=36.69 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=14.5
Q ss_pred CceeEeecCccccCch
Q 024415 2 ADLYALDFDGVLCDSC 17 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~ 17 (268)
+|+|+||+||||+++.
T Consensus 5 ~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 5 KTILLFDVDGTLTKPR 20 (247)
T ss_pred CeEEEEECcCCCcCCC
Confidence 4799999999999877
|
|
| >COG0731 Fe-S oxidoreductases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.15 E-value=3.4 Score=35.57 Aligned_cols=44 Identities=25% Similarity=0.473 Sum_probs=32.8
Q ss_pred ccCCCCCChHHHH---HcCC-CeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEec
Q 024415 136 GANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 186 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g-~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~ 186 (268)
+...++|...+++ |+.| ++++||||+.. ..+++. +. .+|.++.+
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~-L~---~~dql~~s 136 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEE-LK---LPDQLYVS 136 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHH-hc---cCCEEEEE
Confidence 4458999999988 7888 79999999998 455555 22 46666544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.09 E-value=1.1 Score=42.93 Aligned_cols=45 Identities=18% Similarity=0.009 Sum_probs=38.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEE--ecCccchhcccccccccCCeEEEeecC
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFV--EDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~I--GDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
.|..+++.+++.+++..++++.| ||+.+|+.+ -+.+|..+ ++...
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisM----Le~Ag~gV-AM~~~ 659 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSM----LETVDSPI-LVQRP 659 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHH----HHhCCceE-EEcCC
Confidence 89999999999999988888999 999999999 89999844 45433
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=83.95 E-value=4.4 Score=32.74 Aligned_cols=81 Identities=14% Similarity=0.112 Sum_probs=51.8
Q ss_pred CCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCC--CCe--EEecC---------CCCh-HHHHHHHHhcCC
Q 024415 140 FYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIP--PDR--IYGLG---------TGPK-VEVLKQLQKKPE 203 (268)
Q Consensus 140 ~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~--f~~--i~~~~---------~~pk-~~~~~~~~~~~~ 203 (268)
.+|++.++|+ ...|.|+|-|.+...+++..+.. +|+... +.. +...+ .++. ..-+..+-.+++
T Consensus 46 kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~ 124 (195)
T TIGR02245 46 MRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLP 124 (195)
T ss_pred eCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcc
Confidence 5699999993 67899999999999999999998 676422 111 11111 1211 111222322333
Q ss_pred --CCCCcEEEEecCccchhc
Q 024415 204 --LQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 204 --~~~~~~l~IGDs~~Di~~ 221 (268)
.+..++|+|+|++.....
T Consensus 125 ~~~~~~ntiiVDd~p~~~~~ 144 (195)
T TIGR02245 125 EFYSMKNTIMFDDLRRNFLM 144 (195)
T ss_pred cCCCcccEEEEeCCHHHHhc
Confidence 367899999999764433
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.61 E-value=6 Score=38.10 Aligned_cols=65 Identities=20% Similarity=0.070 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.|.++.+.+.++-+ .++-.|||+-+|+-+ -+.|.+ .|++...-+. |+..-+|+.+..+..+.++|
T Consensus 768 QKA~v~~llq~~t~---krvc~IGDGGNDVsM----Iq~A~~-GiGI~gkEGk-----QASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTG---KRVCAIGDGGNDVSM----IQAADV-GIGIVGKEGK-----QASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHHHHHHhhC---ceEEEEcCCCccchh----eeeccc-ceeeeccccc-----ccchhccccHHHHHHHHHHh
Confidence 56777777776655 567899999999999 554443 1233211122 22234678888888877765
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=81.57 E-value=0.72 Score=38.59 Aligned_cols=33 Identities=9% Similarity=0.016 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHH
Q 024415 164 RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQL 198 (268)
Q Consensus 164 ~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~ 198 (268)
..+..+++. +++.. -..++.+|+..+..+++.+
T Consensus 170 ~a~~~~~~~-~~~~~-~~~i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 170 EIVKRLLWH-QPGSG-ISPVYLGDDITDEDAFRVV 202 (244)
T ss_pred HHHHHHHHh-cccCC-CceEEEcCCCcHHHHHHHH
Confidence 466777777 67643 2345566666888888877
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=81.23 E-value=2.6 Score=41.67 Aligned_cols=18 Identities=22% Similarity=0.137 Sum_probs=13.8
Q ss_pred CCCCEEEcCHhHHHhhcC
Q 024415 251 SIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 251 ~~p~~~~~~~~~l~~~l~ 268 (268)
+...+.+++..|+.++|+
T Consensus 764 s~A~y~l~~~~eV~~lL~ 781 (797)
T PLN03063 764 TKARYVLDSSNDVVSLLH 781 (797)
T ss_pred ccCeecCCCHHHHHHHHH
Confidence 345689999999888773
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=80.83 E-value=2.3 Score=42.32 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=14.0
Q ss_pred CCceeEeecCccccCch
Q 024415 1 MADLYALDFDGVLCDSC 17 (268)
Q Consensus 1 M~~~viFD~DGTL~d~~ 17 (268)
|.++|+||+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 45789999999999654
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=80.37 E-value=2.7 Score=35.70 Aligned_cols=38 Identities=24% Similarity=0.182 Sum_probs=30.5
Q ss_pred CChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC
Q 024415 142 PGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP 180 (268)
Q Consensus 142 pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f 180 (268)
|++.++| +++|++++++||++...+...++. +|+..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCE
Confidence 3344555 689999999999999999999999 7886554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 268 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 3e-04 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 7e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 2e-05
Identities = 33/221 (14%), Positives = 68/221 (30%), Gaps = 51/221 (23%)
Query: 17 CGESSL--SAVKAAKVRWPGLFDGVDSVIEDWI-VDQMHILRPVVETGYENLLLVRLLLE 73
G++ + + KV+ + + W+ + + V+E +L +LL +
Sbjct: 161 SGKTWVALDVCLSYKVQ-CKMDFKIF-----WLNLKNCNSPETVLE------MLQKLLYQ 208
Query: 74 IRMPSIRKSSVSEGLTVEGILENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTT 133
I +S S + + + + +++ L+ L + +
Sbjct: 209 IDPNWTSRSDHSSNIKLR--IHSIQAELRRLLKSKPYEN-CLLVL----LNVQ---NAKA 258
Query: 134 WIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVE 193
W +A S +I ++TT+ + D L L
Sbjct: 259 W-----------NAFNL-SCKI-LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 194 VL-KQLQKKPE------LQGMTLH------FVEDRLATLKN 221
+L K L +P+ L + D LAT N
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 3e-04
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 139 RFYPGIPDALKFASSRIY---IVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKV--- 192
+ YP IP L+ S+ + +V+ K + +L L ++ D I G T +
Sbjct: 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL-NLSGYFDLIVGGDTFGEKKPS 141
Query: 193 -----EVLKQLQKKPE 203
+ L+ L ++PE
Sbjct: 142 PTPVLKTLEILGEEPE 157
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 7e-04
Identities = 16/98 (16%), Positives = 27/98 (27%), Gaps = 12/98 (12%)
Query: 117 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIY---IVTTKQSRFADALLREL 173
D R E+ + +P L + I++TK + LR
Sbjct: 67 DQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH 126
Query: 174 AGVTIPPDRIYGLGTGPK--------VEVLKQLQKKPE 203
D I G + + +L+ PE
Sbjct: 127 -MPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPE 163
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 268 | |||
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.96 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.96 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.95 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.95 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.95 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.95 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.95 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.94 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.94 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.94 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.94 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.94 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.93 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.93 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.93 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.93 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.93 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.93 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.93 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.93 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.93 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.92 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.92 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.92 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.92 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.92 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.92 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.92 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.92 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.92 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.92 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.92 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.91 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.91 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.91 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.91 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.91 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.91 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.91 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.9 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.9 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.9 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.9 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.9 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.9 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.89 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.89 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.89 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.89 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.89 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.89 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.88 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.87 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.87 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.87 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.87 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.85 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.85 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.85 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.84 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.84 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.83 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.82 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.81 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.8 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.8 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.8 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.8 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.79 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.78 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.78 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.77 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.77 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.77 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.77 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.76 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.75 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.75 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.74 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.73 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.73 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.71 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.71 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.7 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.7 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.7 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.69 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.68 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.5 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.67 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.67 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.66 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.66 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.65 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.64 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.64 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.62 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.62 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.61 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.61 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.61 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.6 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.58 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.54 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.48 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.48 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.46 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.45 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.37 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.35 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.33 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.32 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.29 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.27 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.27 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.23 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.17 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.13 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.13 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.12 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.07 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.05 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.96 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.95 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.89 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.88 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.83 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.8 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.75 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.59 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.47 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.41 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.32 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.17 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.15 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.1 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.01 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.01 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.97 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.79 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 97.56 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.47 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.43 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.39 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.37 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.29 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.29 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.29 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.05 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.03 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.0 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 96.99 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 96.98 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 96.93 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.83 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.64 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.57 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 96.49 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 96.02 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 95.97 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 95.5 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 95.35 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 95.29 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 93.9 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 93.63 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 93.28 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 93.06 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 92.62 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 92.36 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 92.04 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 91.58 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 85.24 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 84.35 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 84.14 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 82.87 |
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=211.32 Aligned_cols=124 Identities=20% Similarity=0.260 Sum_probs=111.5
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC--CCChHHHHHHHHhcCCCCCCcEEE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--TGPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~--~~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
..+++||+.++| ++ |++++|+||+++..++..++. +|+..+|+.+++++ .||+|+++..++++++++|++|+|
T Consensus 82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~ 159 (210)
T 2ah5_A 82 EAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp SCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHh-cCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcccEEE
Confidence 457899999999 56 999999999999999999999 89999999999876 259999999999999999999999
Q ss_pred EecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
|||+.+|+++ |+++|+.+|++.+|++..+++.. ..|++++.++.+|..+|+
T Consensus 160 vgDs~~Di~~----a~~aG~~~i~v~~~~~~~~~l~~--~~a~~v~~~~~el~~~l~ 210 (210)
T 2ah5_A 160 IGDTKFDMLG----ARETGIQKLAITWGFGEQADLLN--YQPDYIAHKPLEVLAYFQ 210 (210)
T ss_dssp EESSHHHHHH----HHHHTCEEEEESSSSSCHHHHHT--TCCSEEESSTTHHHHHTC
T ss_pred ECCCHHHHHH----HHHCCCcEEEEcCCCCCHHHHHh--CCCCEEECCHHHHHHHhC
Confidence 9999999999 99999999999999776666654 468999999999988774
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-30 Score=211.22 Aligned_cols=125 Identities=18% Similarity=0.131 Sum_probs=109.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
....+++||+.++| +++|++++++||+++..+...++. +|+..+||.+++++. ||+|++++.++++++++|+
T Consensus 80 ~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~-~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~ 158 (216)
T 3kbb_A 80 SELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR-LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPE 158 (216)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGG
T ss_pred HHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHh-cCCCccccccccccccCCCcccHHHHHHHHHhhCCCcc
Confidence 44567899999998 699999999999999999999999 899999999998864 5999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEE-eecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYL-GDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~-v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+|+||||+..|+.+ |+++||.+|+ +.+|++..+.+.+.+ + ..+.++.++.+.|
T Consensus 159 e~l~VgDs~~Di~a----A~~aG~~~i~~v~~g~~~~~~l~~~~--~-~~i~~~~eli~~l 212 (216)
T 3kbb_A 159 KVVVFEDSKSGVEA----AKSAGIERIYGVVHSLNDGKALLEAG--A-VALVKPEEILNVL 212 (216)
T ss_dssp GEEEEECSHHHHHH----HHHTTCCCEEEECCSSSCCHHHHHTT--C-SEEECGGGHHHHH
T ss_pred ceEEEecCHHHHHH----HHHcCCcEEEEecCCCCCHHHHHhCC--C-cEECCHHHHHHHH
Confidence 99999999999999 9999999985 899988888887743 3 3445777776665
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-29 Score=206.29 Aligned_cols=124 Identities=12% Similarity=0.163 Sum_probs=110.6
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||++...++..++. +|+. +|+.+++++. +|+|+++..++++++++|++
T Consensus 107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~ 184 (240)
T 2hi0_A 107 IKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEE-LFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDK 184 (240)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGG
T ss_pred hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 4467899999999 689999999999999999999999 7998 9999998764 49999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|++|||+.+|+.+ |+++|+.+|++.+|+...+++.. ..|++++.++.|+..+|
T Consensus 185 ~~~vGDs~~Di~~----a~~aG~~~v~v~~~~~~~~~~~~--~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 185 CVYIGDSEIDIQT----ARNSEMDEIAVNWGFRSVPFLQK--HGATVIVDTAEKLEEAI 237 (240)
T ss_dssp EEEEESSHHHHHH----HHHTTCEEEEESSSSSCHHHHHH--TTCCCEECSHHHHHHHH
T ss_pred eEEEcCCHHHHHH----HHHCCCeEEEECCCCCchhHHHh--cCCCEEECCHHHHHHHh
Confidence 9999999999999 99999999999999766556654 46889999999998765
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=200.74 Aligned_cols=126 Identities=16% Similarity=0.217 Sum_probs=114.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
.....++||+.++| +++|++++++||+....++..++. +|+..+|+.+++++. +|||++++.++++++++|+
T Consensus 82 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 160 (226)
T 3mc1_A 82 MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEH-FKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSD 160 (226)
T ss_dssp GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGG
T ss_pred cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcc
Confidence 44568999999999 688999999999999999999999 899999999998874 4999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+|++|||+.+|+.+ |+++|+.+|++.+|+...+.+.. ..|++++.++.||.++|
T Consensus 161 ~~i~iGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~--~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 161 DAIMIGDREYDVIG----ALKNNLPSIGVTYGFGSYEELKN--AGANYIVNSVDELHKKI 214 (226)
T ss_dssp GEEEEESSHHHHHH----HHTTTCCEEEESSSSSCHHHHHH--HTCSEEESSHHHHHHHH
T ss_pred cEEEECCCHHHHHH----HHHCCCCEEEEccCCCCHHHHHH--cCCCEEECCHHHHHHHH
Confidence 99999999999999 99999999999999877777644 36899999999999886
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-28 Score=199.79 Aligned_cols=126 Identities=15% Similarity=0.182 Sum_probs=114.9
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++++||+....++..++. +|+..+|+.+++++. +|++++++.++++++++|++
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 179 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAEL-TGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPER 179 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 4567899999999 688999999999999999999999 799999999999875 49999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
|++|||+.+|+.+ |+.+|+.+|+|.+|++..+.+.. ..|++++.++.||.++|+
T Consensus 180 ~i~vGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~--~~ad~v~~~~~el~~~l~ 233 (237)
T 4ex6_A 180 CVVIGDGVPDAEM----GRAAGMTVIGVSYGVSGPDELMR--AGADTVVDSFPAAVTAVL 233 (237)
T ss_dssp EEEEESSHHHHHH----HHHTTCEEEEESSSSSCHHHHHH--TTCSEEESSHHHHHHHHH
T ss_pred eEEEcCCHHHHHH----HHHCCCeEEEEecCCCCHHHHHh--cCCCEEECCHHHHHHHHH
Confidence 9999999999999 99999999999999877777765 468999999999998763
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=198.10 Aligned_cols=126 Identities=21% Similarity=0.206 Sum_probs=114.5
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCC-C
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQ-G 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~-~ 206 (268)
....+++||+.++| +++|++++++||+....++..++. +|+..+|+.+++++. +|++++++.+.++++++ |
T Consensus 106 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 184 (240)
T 3sd7_A 106 IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRY-FDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDK 184 (240)
T ss_dssp GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCG
T ss_pred ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-cCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCC
Confidence 44568999999999 688999999999999999999999 899999999998874 49999999999999999 9
Q ss_pred CcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+++++|||+.+|+.+ |+++|+.++++.+|++..+.+.. ..|++++.++.||.++|
T Consensus 185 ~~~i~vGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~--~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 185 DKVIMVGDRKYDIIG----AKKIGIDSIGVLYGYGSFEEISE--SEPTYIVENVESIKDIL 239 (240)
T ss_dssp GGEEEEESSHHHHHH----HHHHTCEEEEESSSSCCHHHHHH--HCCSEEESSSTTHHHHH
T ss_pred CcEEEECCCHHHHHH----HHHCCCCEEEEeCCCCCHHHHhh--cCCCEEECCHHHHHHHh
Confidence 999999999999999 99999999999999887777644 46899999999999876
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=205.08 Aligned_cols=121 Identities=15% Similarity=0.070 Sum_probs=100.9
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...++||+.++| +++|++++++||+.. ....++. +|+..+|+.+++++. ||+|+++..+++++++.|++|
T Consensus 93 ~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 169 (243)
T 4g9b_A 93 VNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAA-LELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 169 (243)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHH-TTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccccccHHHHHHhhhcccccceecccccc--hhhhhhh-hhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence 346899999998 689999999999765 4567888 899999999998864 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
+||||+..|+.+ |+++||.+|+|.+|+...+.+.. +.+++.+.++.++.+.
T Consensus 170 l~VgDs~~di~a----A~~aG~~~I~V~~g~~~ad~~~~--~~~~l~~~~l~~~~~~ 220 (243)
T 4g9b_A 170 IGIEDAQAGIDA----INASGMRSVGIGAGLTGAQLLLP--STESLTWPRLSAFWQN 220 (243)
T ss_dssp EEEESSHHHHHH----HHHHTCEEEEESTTCCSCSEEES--SGGGCCHHHHHHHHHH
T ss_pred EEEcCCHHHHHH----HHHcCCEEEEECCCCCcHHHhcC--ChhhcCHHHHHHHHHH
Confidence 999999999999 99999999999999865544332 2344666667666543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=195.85 Aligned_cols=126 Identities=14% Similarity=-0.045 Sum_probs=115.4
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++++||+....+...++. +|+..+|+.+++++. +|++++++.++++++++|++
T Consensus 88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 166 (233)
T 3s6j_A 88 HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKA-LKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDE 166 (233)
T ss_dssp GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHT-TTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHh-cchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHH
Confidence 4568899999999 689999999999999999999999 899999999998864 49999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++|||+.+|+.+ |+++|+.+|+|.+|.+..+.+.. ..|++++.++.||.++|+
T Consensus 167 ~i~iGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~l~~--~~ad~v~~~~~el~~~l~ 220 (233)
T 3s6j_A 167 CLVIGDAIWDMLA----ARRCKATGVGLLSGGYDIGELER--AGALRVYEDPLDLLNHLD 220 (233)
T ss_dssp EEEEESSHHHHHH----HHHTTCEEEEEGGGSCCHHHHHH--TTCSEEESSHHHHHHTGG
T ss_pred EEEEeCCHHhHHH----HHHCCCEEEEEeCCCCchHhHHh--cCCCEEECCHHHHHHHHH
Confidence 9999999999999 99999999999999888878776 458999999999998874
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=199.37 Aligned_cols=126 Identities=11% Similarity=-0.002 Sum_probs=111.1
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCC-CCeEEecCC----CChHHHHHHHHhcCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIP-PDRIYGLGT----GPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~-f~~i~~~~~----~pk~~~~~~~~~~~~~~~ 206 (268)
.....++||+.++| +++|++++++||++...+...++. +|+..+ |+.+++++. +|+|.+++.++++++++|
T Consensus 107 ~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 185 (277)
T 3iru_A 107 AQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIA-AKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGH 185 (277)
T ss_dssp HHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSC
T ss_pred hccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHh-cCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCC
Confidence 45578999999998 689999999999999999999999 798888 899998864 499999999999999999
Q ss_pred -CcEEEEecCccchhcccccccccCCeEEEeecCCC-----------------------CHHHHHhhcCCCCEEEcCHhH
Q 024415 207 -MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYN-----------------------TQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 207 -~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~-----------------------~~~~~~~~~~~p~~~~~~~~~ 262 (268)
++|++|||+.+|+.+ |+++|+.+|+|.+|++ ....+.. ..||+++.++.|
T Consensus 186 ~~~~i~vGD~~~Di~~----a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~ad~v~~~~~e 259 (277)
T 3iru_A 186 VNGCIKVDDTLPGIEE----GLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFN--AGAHYVIDSVAD 259 (277)
T ss_dssp GGGEEEEESSHHHHHH----HHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH--HTCSEEESSGGG
T ss_pred CccEEEEcCCHHHHHH----HHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhh--CCCCEEecCHHH
Confidence 999999999999999 9999999999999975 2334444 358999999999
Q ss_pred HHhhc
Q 024415 263 FSRKL 267 (268)
Q Consensus 263 l~~~l 267 (268)
|..+|
T Consensus 260 l~~~l 264 (277)
T 3iru_A 260 LETVI 264 (277)
T ss_dssp THHHH
T ss_pred HHHHH
Confidence 98876
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-28 Score=202.25 Aligned_cols=112 Identities=17% Similarity=0.119 Sum_probs=96.6
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++++|+... +...++. +|+..+|+.|++++. ||+|+++..+++++++.|++|
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~-~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 190 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNH-LGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC 190 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-HTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccccchhHHHHHHHHHhcccccccccccch--hhhHhhh-cccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence 446899999998 689999999887654 4567888 799999999998864 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
+||||+..|+++ |+++|+.+|+|.+. +.+. .||+++.++.||
T Consensus 191 l~VGDs~~Di~a----A~~aG~~~i~v~~~----~~~~----~ad~vi~~l~eL 232 (250)
T 4gib_A 191 IGIEDASAGIDA----INSANMFSVGVGNY----ENLK----KANLVVDSTNQL 232 (250)
T ss_dssp EEEESSHHHHHH----HHHTTCEEEEESCT----TTTT----TSSEEESSGGGC
T ss_pred EEECCCHHHHHH----HHHcCCEEEEECCh----hHhc----cCCEEECChHhC
Confidence 999999999999 99999999998543 2222 489999999986
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-28 Score=197.90 Aligned_cols=122 Identities=22% Similarity=0.248 Sum_probs=109.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||++...+...++. +|+..+|+.+++++. ||+|++++.+.++++++|++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 158 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDI-LNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEK 158 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGG
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchh
Confidence 4567999999999 688999999999999999999999 899999999998763 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|+||||+.+|+.+ |+++|+.+|++.+|++.... ..|++++.++.++..+|
T Consensus 159 ~~~vGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~-----~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 159 ALIVGDTDADIEA----GKRAGTKTALALWGYVKLNS-----QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp EEEEESSHHHHHH----HHHHTCEEEEETTSSCSCCC-----CCCSEEESSTTHHHHHH
T ss_pred EEEECCCHHHHHH----HHHCCCeEEEEcCCCCCccc-----cCCCEEECCHHHHHHHH
Confidence 9999999999999 99999999999998754432 46899999999998765
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-27 Score=197.52 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=112.0
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
....+++||+.++| +++|++++|+||++...+...++. +|+..+|+.+++++. +|+|++++.+.+++++.|+
T Consensus 110 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 188 (243)
T 2hsz_A 110 CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK 188 (243)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHH-cCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChh
Confidence 34568999999999 688999999999999999999999 799999999998764 5999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+|+||||+.+|+.+ |+++|+.++++.+|++....+.. ..|++++.++.+|.++++
T Consensus 189 ~~~~vGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~--~~ad~vi~~~~el~~~l~ 243 (243)
T 2hsz_A 189 QILFVGDSQNDIFA----AHSAGCAVVGLTYGYNYNIPIAQ--SKPDWIFDDFADILKITQ 243 (243)
T ss_dssp GEEEEESSHHHHHH----HHHHTCEEEEESSSCSTTCCGGG--GCCSEEESSGGGGGGGTC
T ss_pred hEEEEcCCHHHHHH----HHHCCCeEEEEcCCCCchhhhhh--CCCCEEECCHHHHHHHhC
Confidence 99999999999999 99999999999998764433322 468999999999998875
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=186.98 Aligned_cols=126 Identities=16% Similarity=0.108 Sum_probs=110.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++|+||+....+...++. +|+..+|+.+++++. +|+|++++.+++++++.|++
T Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~ 169 (241)
T 2hoq_A 91 AYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILR-LELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEE 169 (241)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred hhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHH-cCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCccc
Confidence 3457899999999 688999999999999999999999 899999999998763 59999999999999999999
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|++|||+. +|+.+ |+++|+.++++.+|+.....+. ....|++++.++.||..+|
T Consensus 170 ~i~iGD~~~~Di~~----a~~aG~~~~~v~~g~~~~~~~~-~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 170 ALMVGDRLYSDIYG----AKRVGMKTVWFRYGKHSERELE-YRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp EEEEESCTTTTHHH----HHHTTCEEEEECCSCCCHHHHT-TGGGCSEEESSTTHHHHHH
T ss_pred EEEECCCchHhHHH----HHHCCCEEEEECCCCCCccccc-ccCCCCEEECCHHHHHHHH
Confidence 99999998 99999 9999999999998876655542 1135899999999998775
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-26 Score=187.70 Aligned_cols=152 Identities=13% Similarity=0.120 Sum_probs=120.8
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCC
Q 024415 100 IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT 177 (268)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~ 177 (268)
....++..++.+.+.. ...+...+... ......++||+.++|+ ++|++++++||++...+...++. +|+.
T Consensus 75 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~-~~l~ 146 (240)
T 3qnm_A 75 RFFYPLQAVGVEDEAL---AERFSEDFFAI----IPTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRS-AGVD 146 (240)
T ss_dssp HHHHHHHHTTCCCHHH---HHHHHHHHHHH----GGGCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHH-HTCG
T ss_pred HHHHHHHHcCCCcHHH---HHHHHHHHHHH----hhhcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHH-cChH
Confidence 3455666667653332 22222223222 2455789999999991 38999999999999999999999 7999
Q ss_pred CCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCC
Q 024415 178 IPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASI 252 (268)
Q Consensus 178 ~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~ 252 (268)
.+|+.+++++. +|++++++.++++++++|++|++|||+. +|+.+ |+++|+.+++++++... .....
T Consensus 147 ~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~----a~~aG~~~~~~~~~~~~-----~~~~~ 217 (240)
T 3qnm_A 147 RYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITG----AHGVGMHQAFYNVTERT-----VFPFQ 217 (240)
T ss_dssp GGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHH----HHHTTCEEEEECCSCCC-----CCSSC
T ss_pred hhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHH----HHHcCCeEEEEcCCCCC-----CcCCC
Confidence 99999998864 4999999999999999999999999996 99999 99999999999998641 12257
Q ss_pred CCEEEcCHhHHHhhcC
Q 024415 253 PRIQLLQLSDFSRKLK 268 (268)
Q Consensus 253 p~~~~~~~~~l~~~l~ 268 (268)
||+++.++.|+..+++
T Consensus 218 ~d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 218 PTYHIHSLKELMNLLE 233 (240)
T ss_dssp CSEEESSTHHHHHHTC
T ss_pred CceEECCHHHHHHHHh
Confidence 9999999999988764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=191.81 Aligned_cols=124 Identities=12% Similarity=-0.026 Sum_probs=111.4
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC--CeEEecCC----CChHHHHHHHHhcCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP--DRIYGLGT----GPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f--~~i~~~~~----~pk~~~~~~~~~~~~~~~ 206 (268)
....++||+.++| +++|++++++||++...+...++. |+..+| +.+++++. +|+|++++.++++++++|
T Consensus 106 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~ 183 (243)
T 3qxg_A 106 PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH--NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKA 183 (243)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH--HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCG
T ss_pred ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH--hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCH
Confidence 3467899999998 689999999999998888888876 889999 88998864 499999999999999999
Q ss_pred CcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++|++|||+.+|+.+ |+++|+.+|++.+|+...+.+.. ..|++++.++.||..+|
T Consensus 184 ~~~i~vGD~~~Di~~----a~~aG~~~i~v~~~~~~~~~l~~--~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 184 DEAVVIENAPLGVEA----GHKAGIFTIAVNTGPLDGQVLLD--AGADLLFPSMQTLCDSW 238 (243)
T ss_dssp GGEEEEECSHHHHHH----HHHTTCEEEEECCSSSCHHHHHH--TTCSEEESCHHHHHHHH
T ss_pred HHeEEEeCCHHHHHH----HHHCCCEEEEEeCCCCCHHHHHh--cCCCEEECCHHHHHHHH
Confidence 999999999999999 99999999999999877777665 56899999999998876
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=188.81 Aligned_cols=125 Identities=10% Similarity=-0.016 Sum_probs=108.4
Q ss_pred ccCCCCCChHHHH---HcC-CCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-----ChHHHHHHHHhcCC--C
Q 024415 136 GANRFYPGIPDAL---KFA-SSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-----PKVEVLKQLQKKPE--L 204 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~-g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-----pk~~~~~~~~~~~~--~ 204 (268)
....++||+.++| +++ |++++|+||+....+...++. +|+..+|+.+++++.. |++.+++.++++++ +
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~ 168 (234)
T 2hcf_A 90 EDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANY 168 (234)
T ss_dssp GGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred CCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHH-CCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence 3456889999999 577 999999999999999999999 8999999987766531 56788999999999 8
Q ss_pred CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 205 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 205 ~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.|++|++|||+.+|+.+ |+++|+.++++.+|+...+.+.. ..|++++.++.||.++|
T Consensus 169 ~~~~~i~iGD~~~Di~~----a~~aG~~~i~v~~~~~~~~~~~~--~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 169 SPSQIVIIGDTEHDIRC----ARELDARSIAVATGNFTMEELAR--HKPGTLFKNFAETDEVL 225 (234)
T ss_dssp CGGGEEEEESSHHHHHH----HHTTTCEEEEECCSSSCHHHHHT--TCCSEEESCSCCHHHHH
T ss_pred CcccEEEECCCHHHHHH----HHHCCCcEEEEcCCCCCHHHHHh--CCCCEEeCCHHhHHHHH
Confidence 99999999999999999 99999999999999776666554 45889999999998776
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=182.40 Aligned_cols=148 Identities=11% Similarity=0.124 Sum_probs=120.1
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCC
Q 024415 100 IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGV 176 (268)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl 176 (268)
....++..++++.+..........+.+... .....++||+.++| +++ ++++++||++.. ++. +|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~-~~l 138 (230)
T 3vay_A 71 VLFHALEDAGYDSDEAQQLADESFEVFLHG-----RHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRR-LGL 138 (230)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHHH-----HTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGG-STT
T ss_pred HHHHHHHHhCCChhhhHHHHHHHHHHHHHh-----hccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhh-cCc
Confidence 345566677777666555555555544432 34578999999999 455 999999998865 677 799
Q ss_pred CCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcC
Q 024415 177 TIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAAS 251 (268)
Q Consensus 177 ~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~ 251 (268)
..+|+.+++++. +|+|++++.++++++++|+++++|||+. +|+.+ |+++|+.++++.+|.+.... ..
T Consensus 139 ~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~----a~~aG~~~~~v~~~~~~~~~----~~ 210 (230)
T 3vay_A 139 ADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAG----AQQAGMRAIWYNPQGKAWDA----DR 210 (230)
T ss_dssp GGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHH----HHHTTCEEEEECTTCCCCCS----SS
T ss_pred HHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHH----HHHCCCEEEEEcCCCCCCcc----cC
Confidence 999999998753 5999999999999999999999999997 99999 99999999999998765433 35
Q ss_pred CCCEEEcCHhHHHhhc
Q 024415 252 IPRIQLLQLSDFSRKL 267 (268)
Q Consensus 252 ~p~~~~~~~~~l~~~l 267 (268)
.|++++.++.||..+|
T Consensus 211 ~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 211 LPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CCSEEESSGGGHHHHH
T ss_pred CCCeeECCHHHHHHHH
Confidence 7999999999999876
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=191.44 Aligned_cols=123 Identities=13% Similarity=0.015 Sum_probs=108.1
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC--CeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP--DRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f--~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
..+++||+.++| +++|++++++||++...+...++. |+..+| +.+++++. +|+|++++.++++++++|+
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH--NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPN 183 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH--HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh--hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChh
Confidence 467899999999 689999999999999888888886 889999 88988863 4999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+|++|||+.+|+.+ |+++|+.+|++.+|......+.. ..|++++.++.||.++|
T Consensus 184 ~~i~vGD~~~Di~~----a~~aG~~~i~v~~~~~~~~~l~~--~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 184 EALVIENAPLGVQA----GVAAGIFTIAVNTGPLHDNVLLN--EGANLLFHSMPDFNKNW 237 (247)
T ss_dssp GEEEEECSHHHHHH----HHHTTSEEEEECCSSSCHHHHHT--TTCSEEESSHHHHHHHH
T ss_pred heEEEeCCHHHHHH----HHHCCCeEEEEcCCCCCHHHHHh--cCCCEEECCHHHHHHHH
Confidence 99999999999999 99999999999999877777665 56899999999998876
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-27 Score=189.85 Aligned_cols=119 Identities=14% Similarity=0.047 Sum_probs=106.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEE
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
.++||+.++| +++|++++++||++...++..++. +|+..+|+.+++++. +|+|++++.++++++++|++|++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 167 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEE-NRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALI 167 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHH-cCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeEE
Confidence 5889999999 689999999999999999999999 899999999998864 49999999999999999999999
Q ss_pred EecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|||+.+|+.+ |+++|+.++++.++...... ..|++++.++.||.++|
T Consensus 168 iGD~~~Di~~----a~~aG~~~~~~~~~~~~~~~-----~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 168 IEDSEKGIAA----GVAADVEVWAIRDNEFGMDQ-----SAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp EECSHHHHHH----HHHTTCEEEEECCSSSCCCC-----TTSSEEESSGGGGGGGC
T ss_pred EeccHhhHHH----HHHCCCEEEEECCCCccchh-----ccHHHHHHHHHHHHhhC
Confidence 9999999999 99999999999987433322 46899999999998875
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.8e-26 Score=182.87 Aligned_cols=123 Identities=15% Similarity=0.212 Sum_probs=108.4
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++ ++++|+||++...++..++. +|+..+|+.+++++. ||+|++++.+.++++++|++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 157 (209)
T 2hdo_A 80 DQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQN 157 (209)
T ss_dssp GGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGG
T ss_pred ccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHH-cChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCccc
Confidence 4567899999999 466 99999999999999999999 799999999988763 58899999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++|||+.+|+.+ |+++|+.+++++||+...+.+. . |++++.++.||.++|+
T Consensus 158 ~i~vGD~~~Di~~----a~~aG~~~~~~~~~~~~~~~~~---~-a~~~~~~~~el~~~l~ 209 (209)
T 2hdo_A 158 ALFIGDSVSDEQT----AQAANVDFGLAVWGMDPNADHQ---K-VAHRFQKPLDILELFK 209 (209)
T ss_dssp EEEEESSHHHHHH----HHHHTCEEEEEGGGCCTTGGGS---C-CSEEESSGGGGGGGC-
T ss_pred EEEECCChhhHHH----HHHcCCeEEEEcCCCCChhhhc---c-CCEEeCCHHHHHHhhC
Confidence 9999999999999 9999999999999976544443 3 8999999999998875
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-25 Score=180.04 Aligned_cols=126 Identities=15% Similarity=0.067 Sum_probs=106.5
Q ss_pred hccCCCCCChHHHH---HcCC-CeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEE
Q 024415 135 IGANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g-~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l 210 (268)
.....++||+.++| +++| ++++++||++...+...++. +|+..+|+.+++.. +|||++++.++++++++|++|+
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~-kpk~~~~~~~~~~lgi~~~~~i 178 (234)
T 3ddh_A 101 KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLER-SGLSPYFDHIEVMS-DKTEKEYLRLLSILQIAPSELL 178 (234)
T ss_dssp TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHH-HTCGGGCSEEEEES-CCSHHHHHHHHHHHTCCGGGEE
T ss_pred hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHH-hCcHhhhheeeecC-CCCHHHHHHHHHHhCCCcceEE
Confidence 45678999999998 6888 99999999999999999999 79999999998754 6999999999999999999999
Q ss_pred EEecCc-cchhcccccccccCCeEEEeecCCC---CHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 211 FVEDRL-ATLKNVIKEPELDGWNLYLGDWGYN---TQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 211 ~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~---~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+|||+. +|+.+ |+++|+.++++.+|+. ...+.. ...|++++.++.||.++|+
T Consensus 179 ~iGD~~~~Di~~----a~~aG~~~v~v~~~~~~g~~~~~~~--~~~~d~v~~~l~el~~~l~ 234 (234)
T 3ddh_A 179 MVGNSFKSDIQP----VLSLGGYGVHIPFEVMWKHEVTETF--AHERLKQVKRLDDLLSLLG 234 (234)
T ss_dssp EEESCCCCCCHH----HHHHTCEEEECCCCTTCCCC---CC--CCTTEEECSSGGGHHHHCC
T ss_pred EECCCcHHHhHH----HHHCCCeEEEecCCcccccCCcccc--cCCCceecccHHHHHHhcC
Confidence 999996 99999 9999999999955432 221221 1234999999999999875
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.93 E-value=8.3e-26 Score=186.14 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=108.5
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCC-CCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPE-LQG 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~-~~~ 206 (268)
.....++||+.++| +++ ++++++||++...+...++. +|+..+|+.+++++. +|+|++++.+.++++ ++|
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 176 (238)
T 3ed5_A 99 EEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRD-SGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSA 176 (238)
T ss_dssp TTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCG
T ss_pred HhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHH-cChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCCh
Confidence 34468999999999 566 99999999999999999999 799999999998764 499999999999999 999
Q ss_pred CcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 207 MTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 207 ~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++++|||+. +|+.+ |+++|+.++++.+|.... . ....|++++.++.||.++|+
T Consensus 177 ~~~i~vGD~~~~Di~~----a~~aG~~~i~~~~~~~~~-~---~~~~ad~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 177 EHTLIIGDSLTADIKG----GQLAGLDTCWMNPDMKPN-V---PEIIPTYEIRKLEELYHILN 231 (238)
T ss_dssp GGEEEEESCTTTTHHH----HHHTTCEEEEECTTCCCC-T---TCCCCSEEESSGGGHHHHHT
T ss_pred hHeEEECCCcHHHHHH----HHHCCCEEEEECCCCCCC-c---ccCCCCeEECCHHHHHHHHH
Confidence 9999999998 99999 999999999999884322 2 22479999999999998874
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-25 Score=179.58 Aligned_cols=125 Identities=13% Similarity=0.174 Sum_probs=111.7
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++++||.+...+...++. +|+..+|+.+++++. +|+|++++.+.++++++|++
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 171 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGN-SGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESE 171 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHH-CCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCccc
Confidence 4567899999998 689999999999999999999999 799999999998864 49999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++|||+.+|+.+ |+++|+.++++.+|.+..+.+. ..|++++.++.||.++|+
T Consensus 172 ~~~iGD~~~Di~~----a~~aG~~~~~~~~~~~~~~~~~---~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 172 ILFVSCNSWDATG----AKYFGYPVCWINRSNGVFDQLG---VVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp EEEEESCHHHHHH----HHHHTCCEEEECTTSCCCCCSS---CCCSEEESSHHHHHHTCC
T ss_pred EEEEeCCHHHHHH----HHHCCCEEEEEeCCCCcccccc---CCCcEEeCCHHHHHHHHH
Confidence 9999999999999 9999999999999865543332 479999999999998874
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=183.64 Aligned_cols=119 Identities=14% Similarity=0.102 Sum_probs=104.5
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
.....++||+.++| +++|++++++||++...+...++. +|+..+|+.+++++. +|+|++++.+.++++++|+
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 177 (231)
T 3kzx_A 99 SDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHH-KNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPS 177 (231)
T ss_dssp CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCS
T ss_pred cccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHH-CCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcc
Confidence 34568999999999 689999999999999999999999 899999999998864 4999999999999999999
Q ss_pred -cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 208 -TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 208 -~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++++|||+.+|+.+ |+++|+.+|++.++.. ..|++.+.++.||.++|
T Consensus 178 ~~~v~vGD~~~Di~~----a~~aG~~~v~~~~~~~---------~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 178 KEVFFIGDSISDIQS----AIEAGCLPIKYGSTNI---------IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp TTEEEEESSHHHHHH----HHHTTCEEEEECC--------------CCEEESSHHHHHHHH
T ss_pred cCEEEEcCCHHHHHH----HHHCCCeEEEECCCCC---------CCCceeeCCHHHHHHHH
Confidence 99999999999999 9999999999865421 25789999999998876
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-25 Score=181.73 Aligned_cols=123 Identities=18% Similarity=0.157 Sum_probs=108.1
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
.....++||+.++| +++ ++++++||++...+...++. +|+..+|+.+++++. +|+|++++.+.++++++|+
T Consensus 96 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 173 (234)
T 3u26_A 96 QRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGE 173 (234)
T ss_dssp HHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGG
T ss_pred HhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHH-cCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCch
Confidence 34567899999999 466 99999999999999999999 899999999998763 5999999999999999999
Q ss_pred cEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 208 TLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 208 ~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++++|||+. +|+.+ |+++|+.++++.+|.... +... .|++++.++.+|.++|
T Consensus 174 ~~~~vGD~~~~Di~~----a~~aG~~~~~v~~~~~~~-~~~~---~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 174 EAVYVGDNPVKDCGG----SKNLGMTSILLDRKGEKR-EFWD---KCDFIVSDLREVIKIV 226 (234)
T ss_dssp GEEEEESCTTTTHHH----HHTTTCEEEEECSSSTTG-GGGG---GCSEEESSTHHHHHHH
T ss_pred hEEEEcCCcHHHHHH----HHHcCCEEEEECCCCCcc-cccc---CCCEeeCCHHHHHHHH
Confidence 999999997 99999 999999999999985433 3332 5899999999998876
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-25 Score=184.62 Aligned_cols=125 Identities=14% Similarity=0.049 Sum_probs=110.8
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe-EEecC-----CCChHHHHHHHHhcCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR-IYGLG-----TGPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~-i~~~~-----~~pk~~~~~~~~~~~~~~~ 206 (268)
....++||+.++| +++|++++|+||.....++..++. +|+..+|+. +++++ .+|++++++.++++++++|
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 185 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRV-AGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILP 185 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHH-TTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCG
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHh-cChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCH
Confidence 4567899999999 578999999999999999999999 899999998 88764 2499999999999999999
Q ss_pred CcEEEEecCccchhcccccccccCCeEEEeecCCCC----HHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT----QKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~----~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++|++|||+.+|+.+ |+++|+.+|++.+|... .+.+.. ..|++++.++.||.++|
T Consensus 186 ~~~i~iGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~~~~~--~~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 186 ERCVVIEDSVTGGAA----GLAAGATLWGLLVPGHPHPDGAAALSR--LGAARVLTSHAELRAAL 244 (259)
T ss_dssp GGEEEEESSHHHHHH----HHHHTCEEEEECCTTSCCSSCHHHHHH--HTCSEEECSHHHHHHHH
T ss_pred HHEEEEcCCHHHHHH----HHHCCCEEEEEccCCCcccccHHHHHh--cCcchhhCCHHHHHHHH
Confidence 999999999999999 99999999999988654 555554 46899999999999876
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.8e-26 Score=190.94 Aligned_cols=158 Identities=13% Similarity=0.164 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHH
Q 024415 96 NWSKIKPVIMEDWSE-NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLR 171 (268)
Q Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~ 171 (268)
.|..+....+...+. +.+.+.......+..+.. ....+++||+.++| +++|++++|+||+... +...++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~ 140 (263)
T 3k1z_A 68 WWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSH------PCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILG 140 (263)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTS------GGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhcC------cccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHH
Confidence 444455566666665 333333333333333221 12347899999999 6889999999998774 688899
Q ss_pred HhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHH-H
Q 024415 172 ELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQK-E 245 (268)
Q Consensus 172 ~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~-~ 245 (268)
. +|+..+|+.+++++. +|+|++++.+++++++.|++|+||||+. +|+.+ |+++|+.++++.++..... .
T Consensus 141 ~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~----a~~aG~~~i~~~~~~~~~~~~ 215 (263)
T 3k1z_A 141 G-LGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQG----PRAVGMHSFLVVGPQALDPVV 215 (263)
T ss_dssp H-TTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHH----HHTTTCEEEEECCSSCCCHHH
T ss_pred h-CCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHH----HHHCCCEEEEEcCCCCCchhh
Confidence 9 899999999998853 5999999999999999999999999997 99999 9999999999999865443 3
Q ss_pred HHhhcCCCCEEEcCHhHHHhhc
Q 024415 246 REEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 246 ~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+.. ..|++++.++.+|.++|
T Consensus 216 ~~~--~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 216 RDS--VPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHH--SCGGGEESSGGGHHHHH
T ss_pred ccc--CCCceEeCCHHHHHHHH
Confidence 333 56899999999998876
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=184.15 Aligned_cols=126 Identities=11% Similarity=0.020 Sum_probs=108.1
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC-CeEEecCC----CChHHHHHHHHhcCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLGT----GPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f-~~i~~~~~----~pk~~~~~~~~~~~~~~~ 206 (268)
.....++||+.++| +++|++++++||++...+...++. +|+..+| +.+++++. +|+|+++..++++++++|
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 177 (267)
T 1swv_A 99 PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 177 (267)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred ccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCC
Confidence 34567899999998 588999999999999999999998 6888775 88887753 499999999999999999
Q ss_pred -CcEEEEecCccchhcccccccccCCeEEEeecCCCC-----------------------HHHHHhhcCCCCEEEcCHhH
Q 024415 207 -MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT-----------------------QKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 207 -~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~-----------------------~~~~~~~~~~p~~~~~~~~~ 262 (268)
++|++|||+.+|+.+ |+.+|+.++++.+|+.. ..++.. ..||+++.++.+
T Consensus 178 ~~~~i~iGD~~nDi~~----a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ad~v~~~~~e 251 (267)
T 1swv_A 178 MNHMIKVGDTVSDMKE----GRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVE--NGAHFTIETMQE 251 (267)
T ss_dssp GGGEEEEESSHHHHHH----HHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH--TTCSEEESSGGG
T ss_pred CcCEEEEeCCHHHHHH----HHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHh--cCCceeccCHHH
Confidence 999999999999999 99999999999999652 233333 458999999999
Q ss_pred HHhhc
Q 024415 263 FSRKL 267 (268)
Q Consensus 263 l~~~l 267 (268)
|.++|
T Consensus 252 l~~~l 256 (267)
T 1swv_A 252 LESVM 256 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98775
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-25 Score=180.17 Aligned_cols=123 Identities=9% Similarity=0.087 Sum_probs=111.1
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++++||++...+...++. +|+..+|+.+++++. +|+|++++.+.++++++|++|
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKS-AGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI 175 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHT-TTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHH-CCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence 467899999999 688999999999999999999999 899999999998864 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++|||+.+|+.+ |+.+|+.++++.+|.+....+. ..|++++.++.||.++|
T Consensus 176 ~~vGD~~~Di~~----a~~~G~~~~~v~~~~~~~~~~~---~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 176 LFVSSNGWDACG----ATWHGFTTFWINRLGHPPEALD---VAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp EEEESCHHHHHH----HHHHTCEEEEECTTCCCCCSSS---CCCSEEESSHHHHHHHH
T ss_pred EEEeCCHHHHHH----HHHcCCEEEEEcCCCCCchhcc---CCCCEEECCHHHHHHHH
Confidence 999999999999 9999999999999876554443 47999999999999876
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-26 Score=188.73 Aligned_cols=124 Identities=14% Similarity=0.091 Sum_probs=106.5
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC--C----CChHHHHHHHHhcCCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--T----GPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~--~----~pk~~~~~~~~~~~~~~~ 206 (268)
....++||+.++| +++|++++|+||+....+...+...+|+..+|+.+++++ . +|+|++++.+++++++.|
T Consensus 109 ~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 109 PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 4578999999999 689999999999998887777654247888999999887 3 499999999999999998
Q ss_pred --CcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 207 --MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 207 --~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++|++|||+.+|+.+ |+++|+.++++.+|.... + ....|++++.++.||...|
T Consensus 189 ~~~~~i~iGD~~~Di~~----a~~aG~~~i~v~~~~~~~-~---~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 189 AMEKCLVFEDAPNGVEA----ALAAGMQVVMVPDGNLSR-D---LTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp CGGGEEEEESSHHHHHH----HHHTTCEEEECCCTTSCG-G---GSTTSSEECSCGGGCCGGG
T ss_pred CcceEEEEeCCHHHHHH----HHHcCCEEEEEcCCCCch-h---hcccccEeecCHHHhhHHH
Confidence 999999999999999 999999999999986543 2 2357999999999986554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=183.43 Aligned_cols=120 Identities=11% Similarity=0.132 Sum_probs=105.1
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCC---HHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~---~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
.++||+.++| +++|++++++||+. ...+...++. +|+..+|+.+++++. +|+|++++.++++++++|++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLER-FGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHH-TTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHh-CCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 3599999998 68899999999999 8899999999 799999999988753 59999999999999999999
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|++|||+. +|+.+ |+.+|+.++++++| +...++. ..|++++.++.||.++|
T Consensus 178 ~~~iGD~~~nDi~~----a~~aG~~~~~~~~~-~~~~~~~---~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 178 SLHIGDTYAEDYQG----ARKVGMWAVWINQE-GDKVRKL---EERGFEIPSIANLKDVI 229 (235)
T ss_dssp EEEEESCTTTTHHH----HHHTTSEEEEECTT-CCSCEEE---ETTEEEESSGGGHHHHH
T ss_pred eEEECCChHHHHHH----HHHCCCEEEEECCC-CCCcccC---CCCcchHhhHHHHHHHH
Confidence 99999998 99999 99999999999988 4332322 24789999999998776
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=176.39 Aligned_cols=124 Identities=16% Similarity=0.198 Sum_probs=109.0
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++++||++...+...++. +|+..+|+.+++++. +|+|++++.+.++++++|++|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHh-cChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 457899999998 688999999999999999999999 899999999998763 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
++|||+.+|+.+ |+++|+.++++.++.+..+.+ ...|++++.++.+|..+|+
T Consensus 172 ~~iGD~~~Di~~----a~~aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l~ 223 (232)
T 1zrn_A 172 LFVASNAWDATG----ARYFGFPTCWINRTGNVFEEM---GQTPDWEVTSLRAVVELFE 223 (232)
T ss_dssp EEEESCHHHHHH----HHHHTCCEEEECTTCCCCCSS---SCCCSEEESSHHHHHTTC-
T ss_pred EEEeCCHHHHHH----HHHcCCEEEEEcCCCCCcccc---CCCCCEEECCHHHHHHHHH
Confidence 999999999999 999999999999886543322 2468999999999988763
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8e-25 Score=184.37 Aligned_cols=124 Identities=10% Similarity=0.037 Sum_probs=105.5
Q ss_pred ccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 136 ~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...+++||+.++|+ +++++++|+||++...+...++. +|+..+|+.+++++. ||+|+++..+++++++.|++|
T Consensus 118 ~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 196 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 196 (260)
T ss_dssp HTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred hcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHh-cCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 45679999999992 34699999999999999999999 799999999988753 599999999999999999999
Q ss_pred EEEecC-ccchhcccccccccCC-eEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 210 HFVEDR-LATLKNVIKEPELDGW-NLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 210 l~IGDs-~~Di~~~~~~A~~aG~-~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+||||+ .+|+.+ |+++|+ .+|++.++.... .. ....|++++.++.||..+|
T Consensus 197 ~~vGDs~~~Di~~----A~~aG~~~~i~v~~~~~~~-~~--~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 197 VMVGDTLETDIQG----GLNAGLKATVWINKSGRVP-LT--SSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp EEEESCTTTHHHH----HHHTTCSEEEEECTTCCCC-SS--CCCCCSEEESSGGGHHHHH
T ss_pred EEECCCchhhHHH----HHHCCCceEEEEcCCCCCc-Cc--ccCCCCEEECCHHHHHHHH
Confidence 999996 899999 999999 899998763221 11 1246899999999998765
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=179.29 Aligned_cols=123 Identities=18% Similarity=0.159 Sum_probs=108.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++++||++...+...++. +|+..+|+.+++++. +|+|++++.++++++++|++|
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 181 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEV 181 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHh-cCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 457899999998 688999999999999999999999 899999999998763 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCC-CEEEcCHhHHHhhcC
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIP-RIQLLQLSDFSRKLK 268 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p-~~~~~~~~~l~~~l~ 268 (268)
++|||+.+|+.+ |+++|+.++++.+|.. .+.+ ...| ++++.++.||.++|+
T Consensus 182 ~~iGD~~~Di~~----a~~aG~~~~~v~~~~~-~~~~---~~~~~~~~~~~~~el~~~l~ 233 (240)
T 2no4_A 182 CFVSSNAWDLGG----AGKFGFNTVRINRQGN-PPEY---EFAPLKHQVNSLSELWPLLA 233 (240)
T ss_dssp EEEESCHHHHHH----HHHHTCEEEEECTTCC-CCCC---TTSCCSEEESSGGGHHHHHC
T ss_pred EEEeCCHHHHHH----HHHCCCEEEEECCCCC-CCcc---cCCCCceeeCCHHHHHHHHH
Confidence 999999999999 9999999999999854 2222 2468 999999999988763
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-25 Score=179.45 Aligned_cols=127 Identities=17% Similarity=0.053 Sum_probs=108.8
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
.....++||+.++| ++.|++++++||.....+...++. +|+..+|+.+++++. +|++.++..+.+.++++|+
T Consensus 85 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 163 (225)
T 3d6j_A 85 NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRN-HMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPE 163 (225)
T ss_dssp GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHT-SSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGG
T ss_pred cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHH-cCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChH
Confidence 34457889999998 578999999999999999999999 799999999988753 4889999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
++++|||+.+|+.+ |+.+|+.++++.+|.+...++.. ..|++++.++.||.++|+
T Consensus 164 ~~i~iGD~~nDi~~----~~~aG~~~~~~~~~~~~~~~l~~--~~ad~v~~~~~el~~~l~ 218 (225)
T 3d6j_A 164 EVLYIGDSTVDAGT----AAAAGVSFTGVTSGMTTAQEFQA--YPYDRIISTLGQLISVPE 218 (225)
T ss_dssp GEEEEESSHHHHHH----HHHHTCEEEEETTSSCCTTGGGG--SCCSEEESSGGGGC----
T ss_pred HeEEEcCCHHHHHH----HHHCCCeEEEECCCCCChHHHhh--cCCCEEECCHHHHHHhhh
Confidence 99999999999999 99999999999999776666654 358899999999887763
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-25 Score=185.86 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=106.6
Q ss_pred ccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 136 ~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
....++||+.++|+ +.+++++++||.+...+...++. +|+. |+.+++++. +|+|++++.+++++++.|++|
T Consensus 117 ~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~-~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 193 (254)
T 3umc_A 117 HRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARH-AGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEV 193 (254)
T ss_dssp GSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHH-HTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHH-cCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHE
Confidence 44678999999992 34599999999999999999999 7985 999888753 599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEee----cCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGD----WGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~----~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
++|||+.+|+.+ |+.+|+.+++++ +|+...+++. ....||+++.++.||.++|
T Consensus 194 ~~iGD~~~Di~~----a~~aG~~~~~~~~~~~~g~~~~~~l~-~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 194 MLCAAHNYDLKA----ARALGLKTAFIARPLEYGPGQSQDLA-AEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp EEEESCHHHHHH----HHHTTCEEEEECCTTTTCTTCCSSSS-CSSCCSEEESSHHHHHHHH
T ss_pred EEEcCchHhHHH----HHHCCCeEEEEecCCccCCCCCcccc-cCCCCcEEECCHHHHHHHh
Confidence 999999999999 999999999999 7765554441 1257999999999999876
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-24 Score=176.22 Aligned_cols=123 Identities=16% Similarity=0.118 Sum_probs=109.2
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC--CeEEecCC---CChHHHHHHHHhcCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP--DRIYGLGT---GPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f--~~i~~~~~---~pk~~~~~~~~~~~~~~~ 206 (268)
.....++||+.++| +++|++++++||+....++..++. +|+..+| +.+++.+. +|+|++++.++++++++|
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~ 144 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA-IGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSP 144 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCG
T ss_pred hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHH-cCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 45567899999999 689999999999999999999999 8999999 78888765 499999999999999999
Q ss_pred CcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
++|++|||+.+|+.+ |+++|+.+|++.++.... + ..||+++.++.||...|+
T Consensus 145 ~~~i~iGD~~~Di~~----a~~aG~~~i~v~~~~~~~---~---~~ad~v~~~~~el~~~~~ 196 (205)
T 3m9l_A 145 SRMVMVGDYRFDLDC----GRAAGTRTVLVNLPDNPW---P---ELTDWHARDCAQLRDLLS 196 (205)
T ss_dssp GGEEEEESSHHHHHH----HHHHTCEEEECSSSSCSC---G---GGCSEECSSHHHHHHHHH
T ss_pred HHEEEECCCHHHHHH----HHHcCCEEEEEeCCCCcc---c---ccCCEEeCCHHHHHHHHH
Confidence 999999999999999 999999999999886422 2 248999999999988763
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-25 Score=184.21 Aligned_cols=123 Identities=14% Similarity=0.116 Sum_probs=106.2
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| ++. ++++++||++...+...++. +|+. |+.+++++. +|+|++++.++++++++|++
T Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 188 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKN-AGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGE 188 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHH-HTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHh-CCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHH
Confidence 4567899999998 454 99999999999999999999 7985 888888753 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEee----cCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGD----WGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~----~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|++|||+.+|+.+ |+.+|+.+++++ ||+....++. ....||+++.++.||.++|
T Consensus 189 ~~~iGD~~~Di~~----a~~aG~~~~~~~~~~~~g~~~~~~~~-~~~~~d~~~~~~~el~~~l 246 (254)
T 3umg_A 189 VMLAAAHNGDLEA----AHATGLATAFILRPVEHGPHQTDDLA-PTGSWDISATDITDLAAQL 246 (254)
T ss_dssp EEEEESCHHHHHH----HHHTTCEEEEECCTTTTCTTCCSCSS-CSSCCSEEESSHHHHHHHH
T ss_pred EEEEeCChHhHHH----HHHCCCEEEEEecCCcCCCCcccccc-ccCCCceEECCHHHHHHHh
Confidence 9999999999999 999999999999 7765554441 1257999999999999876
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.9e-25 Score=178.21 Aligned_cols=123 Identities=13% Similarity=0.144 Sum_probs=107.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| ++.|++++++||.....++..++. +|+..+|+.+++++. +|++++++.+++.+++++++
T Consensus 91 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~ 169 (226)
T 1te2_A 91 ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLT 169 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGG
T ss_pred ccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHh-cCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHH
Confidence 3457889999988 688999999999999999999999 799999999988764 48899999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
+++|||+.+|+.+ |+.+|+.++++.++.+...... ..|++++.++.||.+.
T Consensus 170 ~i~iGD~~nDi~~----a~~aG~~~~~~~~~~~~~~~~~---~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 170 CVALEDSVNGMIA----SKAARMRSIVVPAPEAQNDPRF---VLANVKLSSLTELTAK 220 (226)
T ss_dssp EEEEESSHHHHHH----HHHTTCEEEECCCTTTTTCGGG---GGSSEECSCGGGCCHH
T ss_pred eEEEeCCHHHHHH----HHHcCCEEEEEcCCCCcccccc---cccCeEECCHHHHhHH
Confidence 9999999999999 9999999999999876544333 3588999999987653
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=182.50 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=102.4
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHh--cCCCCCCCeEEecC--CCChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLREL--AGVTIPPDRIYGLG--TGPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~--~gl~~~f~~i~~~~--~~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++| +++|++++|+||++...++..++.. .|+..+|+.+++++ .||+|+++..+.+++++.|++
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p~~ 206 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN 206 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCccc
Confidence 3468999999999 6889999999999999888888851 36999999998763 359999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
|+||||+..|+.+ |+++|+.+|++.++.+....... ..|++++.++.+|
T Consensus 207 ~l~VgDs~~di~a----A~~aG~~~i~v~~~~~~~~~~~~--~~~~~~i~~l~el 255 (261)
T 1yns_A 207 ILFLTDVTREASA----AEEADVHVAVVVRPGNAGLTDDE--KTYYSLITSFSEL 255 (261)
T ss_dssp EEEEESCHHHHHH----HHHTTCEEEEECCTTCCCCCHHH--HHHSCEESSGGGC
T ss_pred EEEEcCCHHHHHH----HHHCCCEEEEEeCCCCCcccccc--cCCCEEECCHHHh
Confidence 9999999999999 99999999999876443322211 2478999999886
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.4e-23 Score=170.04 Aligned_cols=124 Identities=11% Similarity=0.128 Sum_probs=104.9
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEE
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
.....++||+.++| + +|++++++||+....+...++. +|+..+|+.++++ .+|+|+++..++++++++|++|++
T Consensus 108 ~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~i~~~-~kp~~~~~~~~~~~l~~~~~~~i~ 184 (251)
T 2pke_A 108 QHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQ-SGLSDLFPRIEVV-SEKDPQTYARVLSEFDLPAERFVM 184 (251)
T ss_dssp TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHH-HSGGGTCCCEEEE-SCCSHHHHHHHHHHHTCCGGGEEE
T ss_pred hccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH-cCcHHhCceeeee-CCCCHHHHHHHHHHhCcCchhEEE
Confidence 45568899999999 5 8999999999999999999999 7999999998875 469999999999999999999999
Q ss_pred EecCc-cchhcccccccccCCeEEEeecCCCCHH---H-HHhhcCCCCE-EEcCHhHHHhhc
Q 024415 212 VEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQK---E-REEAASIPRI-QLLQLSDFSRKL 267 (268)
Q Consensus 212 IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~---~-~~~~~~~p~~-~~~~~~~l~~~l 267 (268)
|||+. +|+.+ |+++|+.++++.+|+.... + +. ...|++ ++.++.||..+|
T Consensus 185 iGD~~~~Di~~----a~~aG~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 185 IGNSLRSDVEP----VLAIGGWGIYTPYAVTWAHEQDHGVA--ADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp EESCCCCCCHH----HHHTTCEEEECCCC---------------CCTTEEECSSGGGHHHHH
T ss_pred ECCCchhhHHH----HHHCCCEEEEECCCCccccccccccc--cCCCCeeeeCCHHHHHHHH
Confidence 99998 99999 9999999999988864211 1 22 246898 999999998876
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=175.79 Aligned_cols=125 Identities=17% Similarity=0.192 Sum_probs=105.9
Q ss_pred cCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 137 ~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
..+++||+.++|+ + |++++|+||++...+...++. +|+..+|+.+++++. +|+|++++.++++++++|++|+
T Consensus 91 ~~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 168 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (253)
T ss_dssp SCCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred cCCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHH-CCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 4578999999993 4 999999999999999999999 899999999998864 5999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeec------------CCCCHHH--------HHhhcCCCCEEEcCHhHHHhhc
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDW------------GYNTQKE--------REEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~------------g~~~~~~--------~~~~~~~p~~~~~~~~~l~~~l 267 (268)
||||+.+|+.+ |+++|+.++++++ |+.+... .......|++++.++.||.++|
T Consensus 169 ~vGD~~~Di~~----a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 169 FVSSNGFDVGG----AKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp EEESCHHHHHH----HHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EEeCChhhHHH----HHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 99999999999 9999999999988 2211110 1112246999999999998876
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-25 Score=176.20 Aligned_cols=117 Identities=19% Similarity=0.165 Sum_probs=104.7
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++++||+...... .++. +|+..+|+.+++++. +|++++++.+.++++++|++
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~ 159 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDN 159 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHH-cCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence 4567899999999 6889999999999998888 8888 799989999888753 48899999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++|||+.+|+.+ |+.+|+.++++.+|+ . .|++++.++.||.++|+
T Consensus 160 ~~~iGD~~nDi~~----~~~aG~~~i~~~~~~-~---------~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 160 TYYIGDRTLDVEF----AQNSGIQSINFLEST-Y---------EGNHRIQALADISRIFE 205 (207)
T ss_dssp EEEEESSHHHHHH----HHHHTCEEEESSCCS-C---------TTEEECSSTTHHHHHTS
T ss_pred EEEECCCHHHHHH----HHHCCCeEEEEecCC-C---------CCCEEeCCHHHHHHHHh
Confidence 9999999999999 999999999999885 3 37899999999998874
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=176.96 Aligned_cols=126 Identities=12% Similarity=0.066 Sum_probs=105.9
Q ss_pred ccCCCCCChHHHH---HcCCC--eEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------CChHHHHHHHHhcC
Q 024415 136 GANRFYPGIPDAL---KFASS--RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKP 202 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~--~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------~pk~~~~~~~~~~~ 202 (268)
...+++||+.++| +++|+ +++|+||+....+...++. +|+..+|+.+++++. +|+|++++.+++++
T Consensus 139 ~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 139 DILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL-LGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp GTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH-HTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred hccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh-CCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 3467899999999 68899 9999999999999999999 799999999987642 59999999999999
Q ss_pred CCCC-CcEEEEecCccchhcccccccccCC-eEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 203 ELQG-MTLHFVEDRLATLKNVIKEPELDGW-NLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 203 ~~~~-~~~l~IGDs~~Di~~~~~~A~~aG~-~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
++.| ++|++|||+.+|+.+ |+++|+ .++++.++. ....+. ....+++++.++.||.++|.
T Consensus 218 gi~~~~~~i~vGD~~~Di~~----a~~aG~~~~~~~~~~~-~~~~~~-~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 218 GLARYENAYFIDDSGKNIET----GIKLGMKTCIHLVENE-VNEILG-QTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp TCCCGGGEEEEESCHHHHHH----HHHHTCSEEEEECSCC-C----C-CCCTTCEEESSGGGGGGTSG
T ss_pred CCCCcccEEEEcCCHHHHHH----HHHCCCeEEEEEcCCc-cccccc-cCCCCCEEeCCHHHHHHHhh
Confidence 9999 999999999999999 999999 667776654 222221 12468899999999998863
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-23 Score=168.20 Aligned_cols=125 Identities=14% Similarity=0.144 Sum_probs=107.0
Q ss_pred ccCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC-CeEEecC----C--CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLG----T--GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f-~~i~~~~----~--~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++|+....+++++||+....+...++. +|+..+| +.+++++ . +||+++++.++++++++|++
T Consensus 84 ~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~ 162 (229)
T 2fdr_A 84 RDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR 162 (229)
T ss_dssp HHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred cCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHh-CChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence 3467899999999544459999999999999999999 7999999 8888764 4 79999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCC----HHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT----QKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~----~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+++|||+.+|+.+ |+.+|+.++++.++... .+++++ ..|++++.++.|+.++|
T Consensus 163 ~i~iGD~~~Di~~----a~~aG~~~i~~~~~~~~~~~~~~~l~~--~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 163 VVVVEDSVHGIHG----ARAAGMRVIGFTGASHTYPSHADRLTD--AGAETVISRMQDLPAVI 219 (229)
T ss_dssp EEEEESSHHHHHH----HHHTTCEEEEECCSTTCCTTHHHHHHH--HTCSEEESCGGGHHHHH
T ss_pred eEEEcCCHHHHHH----HHHCCCEEEEEecCCccchhhhHHHhh--cCCceeecCHHHHHHHH
Confidence 9999999999999 99999999999988642 234554 24889999999998765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-24 Score=177.47 Aligned_cols=111 Identities=18% Similarity=0.159 Sum_probs=91.2
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEE
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
+++||+.++| +++|++++|+||+.. +...++. +|+..+|+.+++++. +|+|++++.++++++++|++|++
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRR-LAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA 168 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHH-cCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 4899999999 689999999999865 7788999 899999999998864 48899999999999999999999
Q ss_pred EecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
|||+.+|+.+ |+++|+.+++++++ +.++ .|++++.++.|+.
T Consensus 169 vGDs~~Di~~----a~~aG~~~~~~~~~----~~~~----~ad~v~~s~~el~ 209 (233)
T 3nas_A 169 IEDAEAGISA----IKSAGMFAVGVGQG----QPML----GADLVVRQTSDLT 209 (233)
T ss_dssp EECSHHHHHH----HHHTTCEEEECC---------------CSEECSSGGGCC
T ss_pred EeCCHHHHHH----HHHcCCEEEEECCc----cccc----cCCEEeCChHhCC
Confidence 9999999999 99999999998653 2332 5889999998764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-23 Score=167.74 Aligned_cols=123 Identities=10% Similarity=0.059 Sum_probs=100.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHH---HhcCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQL---QKKPELQ 205 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~---~~~~~~~ 205 (268)
...+++||+.++| ++ |++++++||++...+...++. +..+|+.+++++. ||+|++++.+ +++++++
T Consensus 96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~---l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~ 171 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK---LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIE 171 (240)
T ss_dssp GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT---TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCC
T ss_pred hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh---cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 4568999999999 45 899999999999888888776 4578999998863 5999988888 8899999
Q ss_pred CCcEEEEecCc-cchhcccccccccCCeEEEeecC-----CCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 206 GMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWG-----YNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 206 ~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g-----~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|++|++|||+. +|+.+ |+++|+.+++++++ |+.... ......||+++.++.||.++|
T Consensus 172 ~~~~~~vGD~~~~Di~~----a~~aG~~~~~~~~~~~~~g~g~~~~-~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 172 KKDILHTAESLYHDHIP----ANDAGLVSAWIYRRHGKEGYGATHV-PSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GGGEEEEESCTTTTHHH----HHHHTCEEEEECTTCC-------CC-CSSCCCCSEEESSHHHHHHHH
T ss_pred chhEEEECCCchhhhHH----HHHcCCeEEEEcCCCcccCCCCCCC-CcCCCCCCEEeCCHHHHHHHH
Confidence 99999999996 99999 99999999999854 322211 112257999999999998876
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=169.20 Aligned_cols=118 Identities=10% Similarity=0.097 Sum_probs=103.3
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
.+++||+.+ | +++ ++++|+||++...++..++. +|+..+|+.+++++. +|+|+++..+.++++ |++++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLER-NGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHH-CCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 568899988 8 567 99999999999999999999 899999999998753 599999999999988 99999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
||||+.+|+.+ |+++|+.++++.+|.+..+.+ ...|++++.++.||..+|
T Consensus 148 ~vGD~~~Di~~----a~~aG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 148 LVSSNAFDVIG----AKNAGMRSIFVNRKNTIVDPI---GGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp EEESCHHHHHH----HHHTTCEEEEECSSSCCCCTT---SCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHhHH----HHHCCCEEEEECCCCCCcccc---CCCCCEEECCHHHHHHHH
Confidence 99999999999 999999999999986543222 246899999999998775
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.4e-23 Score=165.32 Aligned_cols=118 Identities=9% Similarity=-0.071 Sum_probs=97.9
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCC-CcE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQG-MTL 209 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~-~~~ 209 (268)
.+++||+.++| +++|++++|+||+....+ ++. .+ .+|+.+++++. ||+|+++.++++++++.| ++|
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~~-~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 108 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALS---TPL-AA--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGC 108 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HHH-HT--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HHh-cC--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccE
Confidence 45889999999 688999999999998776 333 34 46899998864 599999999999999975 899
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCC-----------------------HHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT-----------------------QKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~-----------------------~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
+||||+.+|+++ |+++|+.+|++.||++. .+.+.. ..|++++.++.||..+
T Consensus 109 v~VGDs~~Di~a----A~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~--~~~d~vi~~~~eL~~~ 182 (196)
T 2oda_A 109 VLISGDPRLLQS----GLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYS--LGVHSVIDHLGELESC 182 (196)
T ss_dssp EEEESCHHHHHH----HHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH--TTCSEEESSGGGHHHH
T ss_pred EEEeCCHHHHHH----HHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHH--cCCCEEeCCHHHHHHH
Confidence 999999999999 99999999999999752 112222 4699999999999876
Q ss_pred c
Q 024415 267 L 267 (268)
Q Consensus 267 l 267 (268)
|
T Consensus 183 l 183 (196)
T 2oda_A 183 L 183 (196)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=168.40 Aligned_cols=124 Identities=12% Similarity=0.094 Sum_probs=107.8
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCH---HHHHHHHHHhcCCCCCCCeEEecCC--------CChHHHHHHHHhcC
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKP 202 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~---~~~~~~l~~~~gl~~~f~~i~~~~~--------~pk~~~~~~~~~~~ 202 (268)
..+++||+.++| +++|++++|+||++. ..+...++. +|+..+|+.+++++. ||+|++++.+.+++
T Consensus 32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN-FGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-TTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh-cCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 356889999999 689999999999987 889999999 899999999998853 59999999999999
Q ss_pred CCCCCcEEEEecC-ccchhcccccccccCCeEEEeecCCCCH--HHHHhhcCCCCEEEc--CHhHHHhhc
Q 024415 203 ELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQ--KEREEAASIPRIQLL--QLSDFSRKL 267 (268)
Q Consensus 203 ~~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~--~~~~~~~~~p~~~~~--~~~~l~~~l 267 (268)
++.|++++||||+ ..|+.+ |+++|+.+|++.++.... +.+.. ..|++++. ++.+|.++|
T Consensus 111 ~~~~~~~l~VGD~~~~Di~~----A~~aG~~~i~v~~~~~~~~~~~~~~--~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 111 QIDKTEAVMVGNTFESDIIG----ANRAGIHAIWLQNPEVCLQDERLPL--VAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp TCCGGGEEEEESBTTTTHHH----HHHTTCEEEEECCTTTCBCSSCCCB--CSSSCEEEESSGGGHHHHH
T ss_pred CCCcccEEEECCCcHHHHHH----HHHCCCeEEEECCcccccccccccc--CCCcceeccccHHhHHHHH
Confidence 9999999999999 799999 999999999999886432 22221 37899999 999998876
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.89 E-value=9.9e-24 Score=177.03 Aligned_cols=117 Identities=12% Similarity=0.128 Sum_probs=95.5
Q ss_pred cCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhc--C---------CCCCCCeEEec---CCCChHHHHHHHHhcC
Q 024415 137 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELA--G---------VTIPPDRIYGL---GTGPKVEVLKQLQKKP 202 (268)
Q Consensus 137 ~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~--g---------l~~~f~~i~~~---~~~pk~~~~~~~~~~~ 202 (268)
..+++||+.++|+. |++++|+||+++..++..++. . | +..+|+.++.+ ..||+|+++..+++++
T Consensus 123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~-~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~l 200 (253)
T 2g80_A 123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGY-VQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDI 200 (253)
T ss_dssp CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHS-BCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHh-hcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHc
Confidence 45789999999977 999999999999999999997 6 4 55556655433 2479999999999999
Q ss_pred CCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 203 ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 203 ~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
++.|++|+||||+..|+.+ |+++|+.+|++.++.+.. +.. ..|+.++.++.+|
T Consensus 201 g~~p~~~l~vgDs~~di~a----A~~aG~~~i~v~~~~~~~--~~~--~~~~~~i~~l~eL 253 (253)
T 2g80_A 201 GAKASEVLFLSDNPLELDA----AAGVGIATGLASRPGNAP--VPD--GQKYQVYKNFETL 253 (253)
T ss_dssp TCCGGGEEEEESCHHHHHH----HHTTTCEEEEECCTTSCC--CCS--SCCSCEESCSTTC
T ss_pred CCCcccEEEEcCCHHHHHH----HHHcCCEEEEEcCCCCCC--ccc--ccCCCccCChhhC
Confidence 9999999999999999999 999999999998742221 111 2378899988764
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-24 Score=176.60 Aligned_cols=121 Identities=17% Similarity=0.132 Sum_probs=100.9
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEE
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
...+++||+.++| +++| +++|+||++...+...++. +|+..+|+.+++.. .+||..++.+.+ ++.|++|+||
T Consensus 93 ~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~-~gl~~~f~~~~~~~-~~K~~~~~~~~~--~~~~~~~~~v 167 (231)
T 2p11_A 93 FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIAR-SGLWDEVEGRVLIY-IHKELMLDQVME--CYPARHYVMV 167 (231)
T ss_dssp GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHH-TTHHHHTTTCEEEE-SSGGGCHHHHHH--HSCCSEEEEE
T ss_pred HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHH-cCcHHhcCeeEEec-CChHHHHHHHHh--cCCCceEEEE
Confidence 3457999999999 5788 9999999999999999999 79988888766532 366777877776 7899999999
Q ss_pred ecCcc---chhcccccccccCCeEEEeecCCC--CHHHHHhhcC-CCCEEEcCHhHHHhhc
Q 024415 213 EDRLA---TLKNVIKEPELDGWNLYLGDWGYN--TQKEREEAAS-IPRIQLLQLSDFSRKL 267 (268)
Q Consensus 213 GDs~~---Di~~~~~~A~~aG~~~v~v~~g~~--~~~~~~~~~~-~p~~~~~~~~~l~~~l 267 (268)
||+.. |+.+ |+++|+.+|++.+|+. ..+.+.. . .|++++.++.||.++|
T Consensus 168 gDs~~d~~di~~----A~~aG~~~i~v~~g~~~~~~~~l~~--~~~~~~~i~~~~el~~~l 222 (231)
T 2p11_A 168 DDKLRILAAMKK----AWGARLTTVFPRQGHYAFDPKEISS--HPPADVTVERIGDLVEMD 222 (231)
T ss_dssp CSCHHHHHHHHH----HHGGGEEEEEECCSSSSSCHHHHHH--SCCCSEEESSGGGGGGCG
T ss_pred cCccchhhhhHH----HHHcCCeEEEeCCCCCCCcchhccc--cCCCceeecCHHHHHHHH
Confidence 99998 9999 9999999999999853 4445554 3 3899999999988766
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.4e-23 Score=162.42 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=102.2
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCH---------------HHHHHHHHHhcCCCCCCCeEEe-----cC----CCC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYG-----LG----TGP 190 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~---------------~~~~~~l~~~~gl~~~f~~i~~-----~~----~~p 190 (268)
.+++||+.++| +++|++++|+||++. ..+...++. +| .+|+.++. ++ .||
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g--~~~~~~~~~~~~~~~~~~~~KP 102 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQ-MG--GVVDAIFMCPHGPDDGCACRKP 102 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHH-TT--CCCCEEEEECCCTTSCCSSSTT
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHh-CC--CceeEEEEcCCCCCCCCCCCCC
Confidence 35789999988 689999999999986 567778888 67 45666652 23 259
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 191 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 191 k~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+|++++++.++++++|++++||||+.+|+.+ |+++|+.+|++.+|++....+......|++++.++.||.++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 103 LPGMYRDIARRYDVDLAGVPAVGDSLRDLQA----AAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp SSHHHHHHHHHHTCCCTTCEEEESSHHHHHH----HHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----HHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999997655444332356899999999998876
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-23 Score=168.95 Aligned_cols=112 Identities=15% Similarity=0.097 Sum_probs=95.5
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...++||+.++| ++.|++++++||. ......++. +|+..+|+.+++++. +|+|++++.++++++++|++|
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 165 (221)
T 2wf7_A 89 PADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHH-TTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHH-cChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHe
Confidence 346889999998 5889999999998 456778888 799999999988764 488999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
++|||+.+|+.+ |+.+|+.+++++ ...+++ .|++++.++.++
T Consensus 166 i~iGD~~nDi~~----a~~aG~~~~~~~----~~~~~~----~a~~v~~~~~el 207 (221)
T 2wf7_A 166 IGLEDSQAGIQA----IKDSGALPIGVG----RPEDLG----DDIVIVPDTSHY 207 (221)
T ss_dssp EEEESSHHHHHH----HHHHTCEEEEES----CHHHHC----SSSEEESSGGGC
T ss_pred EEEeCCHHHHHH----HHHCCCEEEEEC----CHHHhc----cccchhcCHHhC
Confidence 999999999999 999999999874 233432 588999998875
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-23 Score=177.75 Aligned_cols=120 Identities=11% Similarity=0.038 Sum_probs=103.3
Q ss_pred ccCCCCCChHHHH---HcC-CCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCC---
Q 024415 136 GANRFYPGIPDAL---KFA-SSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPEL--- 204 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~-g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~--- 204 (268)
....++||+.++| +++ |++++++||+....+...++. +|+. .|+.+++++. +|+|+++..+++.+++
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~-~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 188 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPIN 188 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHH-HTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCC
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHH-cCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcc
Confidence 4457889999998 577 899999999999999999999 7986 4888887753 4999999999999999
Q ss_pred ----CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 205 ----QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 205 ----~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
+|++|++|||+.+|+.+ |+++|+.++++.+|++ ..++.. ..|++++.++.+|.
T Consensus 189 ~~~~~~~~~i~~GDs~nDi~~----a~~AG~~~i~v~~~~~-~~~~~~--~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 189 EQDPSKSKVVVFEDAPAGIAA----GKAAGCKIVGIATTFD-LDFLKE--KGCDIIVKNHESIR 245 (275)
T ss_dssp SSCGGGSCEEEEESSHHHHHH----HHHTTCEEEEESSSSC-HHHHTT--SSCSEEESSGGGEE
T ss_pred ccCCCcceEEEEeCCHHHHHH----HHHcCCEEEEECCCCC-HHHHhh--CCCCEEECChHHcC
Confidence 99999999999999999 9999999999999854 444443 35889999998863
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=165.77 Aligned_cols=114 Identities=14% Similarity=0.039 Sum_probs=91.6
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..+++||+.++| +++|++++|+||++. .+...++. +|+..+|+.+++++. ||+|++++.+.+++++.|
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~-~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~--- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEK-FDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPA--- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHH-HTCGGGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHh-cCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence 457899999999 688999999999977 47888999 799999999998864 488899999999999988
Q ss_pred EEEecCcc-chhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 210 HFVEDRLA-TLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 210 l~IGDs~~-Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+||||+.. |+.+ |+++|+.++++.++... .++ ++.+.++.||.++|
T Consensus 168 ~~vgD~~~~Di~~----a~~aG~~~i~v~~~~~~-~~~-------~~~i~~l~el~~~l 214 (220)
T 2zg6_A 168 VHVGDIYELDYIG----AKRSYVDPILLDRYDFY-PDV-------RDRVKNLREALQKI 214 (220)
T ss_dssp EEEESSCCCCCCC----SSSCSEEEEEBCTTSCC-TTC-------CSCBSSHHHHHHHH
T ss_pred EEEcCCchHhHHH----HHHCCCeEEEECCCCCC-CCc-------ceEECCHHHHHHHH
Confidence 99999998 9999 99999999999875221 111 46789999988765
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-22 Score=164.87 Aligned_cols=120 Identities=10% Similarity=0.157 Sum_probs=94.5
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC--CCCeEE---------ecCC-------CChHHHH
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI--PPDRIY---------GLGT-------GPKVEVL 195 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~--~f~~i~---------~~~~-------~pk~~~~ 195 (268)
..+++||+.++| +++|++++|+||++...++..++. +|+.. +|+.++ +.+. +|||+++
T Consensus 84 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 84 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH-cCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 467999999999 689999999999999999999999 79973 666543 3332 3799999
Q ss_pred HHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 196 KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 196 ~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++.++++. ++|+||||+.+|+.+ |+++|+ +|++..+.. ..... ..|++++.++.|+..+|+
T Consensus 163 ~~~~~~~~~--~~~~~vGDs~~Di~~----a~~ag~-~i~~~~~~~-~~~~~---~~~~~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 163 KLLKEKFHF--KKIIMIGDGATDMEA----CPPADA-FIGFGGNVI-RQQVK---DNAKWYITDFVELLGELE 224 (225)
T ss_dssp HHHHHHHCC--SCEEEEESSHHHHTT----TTTSSE-EEEECSSCC-CHHHH---HHCSEEESCGGGGCC---
T ss_pred HHHHHHcCC--CcEEEEeCcHHhHHH----HHhCCe-EEEecCccc-cHHHH---hcCCeeecCHHHHHHHHh
Confidence 999988887 789999999999999 999999 777654322 22222 258899999999887763
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-22 Score=160.78 Aligned_cols=108 Identities=11% Similarity=0.083 Sum_probs=96.2
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC----CCChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~----~~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...++||+.++| +++| +++|+||++...+...++. +|+..+|+.+++++ .+|+|++++.+.++++++|++|
T Consensus 84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~-~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 161 (200)
T 3cnh_A 84 QSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRT-FGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEA 161 (200)
T ss_dssp TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHH-HTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred cCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHh-CCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 345899999999 5788 9999999999999999999 79999999998875 2599999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhc
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAA 250 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~ 250 (268)
+||||+.+|+.+ |+++|+.++++.+++...+.+...+
T Consensus 162 ~~vgD~~~Di~~----a~~aG~~~~~~~~~~~~~~~l~~~g 198 (200)
T 3cnh_A 162 VMVDDRLQNVQA----ARAVGMHAVQCVDAAQLREELAALG 198 (200)
T ss_dssp EEEESCHHHHHH----HHHTTCEEEECSCHHHHHHHHHHTT
T ss_pred EEeCCCHHHHHH----HHHCCCEEEEECCchhhHHHHHHhc
Confidence 999999999999 9999999999999876666666543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.9e-23 Score=165.76 Aligned_cols=106 Identities=14% Similarity=0.200 Sum_probs=92.4
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHh-----cCCCCCCCeEEecC----CCChHHHHHHHHhcCCCC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLREL-----AGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQ 205 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~-----~gl~~~f~~i~~~~----~~pk~~~~~~~~~~~~~~ 205 (268)
..++||+.++| ++ |++++++||++...+...++.+ +|+..+|+.+++++ .+|+|++++.+.++++++
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 166 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK 166 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence 46789999999 35 9999999999998888888762 38888999999875 359999999999999999
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
|++|++|||+.+|+.+ |+++|+.+++++++....+.+.+
T Consensus 167 ~~~~~~igD~~~Di~~----a~~aG~~~~~~~~~~~~~~~l~~ 205 (211)
T 2i6x_A 167 PEETLFIDDGPANVAT----AERLGFHTYCPDNGENWIPAITR 205 (211)
T ss_dssp GGGEEEECSCHHHHHH----HHHTTCEEECCCTTCCCHHHHHH
T ss_pred hHHeEEeCCCHHHHHH----HHHcCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999 99999999999998766666554
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-21 Score=156.69 Aligned_cols=119 Identities=21% Similarity=0.238 Sum_probs=100.4
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCC---------------HHHHHHHHHHhcCCCCCCCeEEec------------C-
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRIYGL------------G- 187 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~---------------~~~~~~~l~~~~gl~~~f~~i~~~------------~- 187 (268)
+++||+.++| +++|++++|+||++ ...+...++. +|+. |+.++.+ +
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--f~~~~~~~~~~~~~~~~~~~~ 126 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD--LDGIYYCPHHPQGSVEEFRQV 126 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCBTTCSSGGGBSC
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH-cCCc--eEEEEECCcCCCCcccccCcc
Confidence 4778988888 68999999999999 4778889999 7986 7776532 1
Q ss_pred ---CCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeE-EEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 188 ---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 188 ---~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~-v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
.||+|++++++.+++++.|++++||||+.+|+.+ |+++|+.+ +++.+|+...+... ..|++++.++.||
T Consensus 127 ~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~----a~~aG~~~~i~v~~g~~~~~~~~---~~~d~vi~~l~el 199 (211)
T 2gmw_A 127 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQA----AVAANVGTKVLVRTGKPITPEAE---NAADWVLNSLADL 199 (211)
T ss_dssp CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHH----HHHTTCSEEEEESSSSCCCHHHH---HHCSEEESCGGGH
T ss_pred CcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHH----HHHCCCceEEEEecCCCcccccc---CCCCEEeCCHHHH
Confidence 2599999999999999999999999999999999 99999999 99999975443322 3589999999999
Q ss_pred Hhhc
Q 024415 264 SRKL 267 (268)
Q Consensus 264 ~~~l 267 (268)
.++|
T Consensus 200 ~~~l 203 (211)
T 2gmw_A 200 PQAI 203 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8775
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.4e-22 Score=162.84 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=88.0
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHH------HHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALL------RELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQ 205 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l------~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~ 205 (268)
+++||+.++| +++ ++++|+||++...+...+ +. +|+..+|+.+++++. ||+|++++.+++++++.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~ 189 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRT-FKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGID 189 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTT-BCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhcc-CCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 5779999999 455 999999999999888555 66 688889999988753 59999999999999999
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHH
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 245 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~ 245 (268)
|++|+||||+.+|+.+ |+++|+.+++++++....+.
T Consensus 190 ~~~~~~vGD~~~Di~~----a~~aG~~~i~v~~~~~~k~~ 225 (229)
T 4dcc_A 190 PKETFFIDDSEINCKV----AQELGISTYTPKAGEDWSHL 225 (229)
T ss_dssp GGGEEEECSCHHHHHH----HHHTTCEEECCCTTCCGGGG
T ss_pred HHHeEEECCCHHHHHH----HHHcCCEEEEECCHHHHHHH
Confidence 9999999999999999 99999999999988554433
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=7.7e-22 Score=160.47 Aligned_cols=110 Identities=10% Similarity=0.021 Sum_probs=93.5
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEec-----------C---CCChHHHHHHHH
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-----------G---TGPKVEVLKQLQ 199 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~-----------~---~~pk~~~~~~~~ 199 (268)
..+++||+.++| +++|++++++||+....++..++. +|+..+|+.+++. + .+|||++++.++
T Consensus 73 ~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 73 SLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp TCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred cCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-cCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 367999999999 689999999999999999999999 7999999887632 2 249999999999
Q ss_pred hcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 200 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 200 ~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
++++++|+++++|||+.+|+.+ |+++|+.+++ +..+.++. .|++++.+
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~----a~~aG~~~~~-----~~~~~l~~---~ad~v~~~ 199 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSM----FKHAHIKIAF-----NAKEVLKQ---HATHCINE 199 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHH----HTTCSEEEEE-----SCCHHHHT---TCSEEECS
T ss_pred HHcCCCHhHEEEEeCCHHHHHH----HHHCCCeEEE-----CccHHHHH---hcceeecc
Confidence 9999999999999999999999 9999997765 23345553 57888754
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-22 Score=159.23 Aligned_cols=95 Identities=16% Similarity=0.217 Sum_probs=84.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEEE
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
.++||+.++| +++|++++++||.+. .+...++. +|+..+|+.+++++. +|+|++++.+.++++++ +|++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~-~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHH-cCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 4899999998 688999999999875 67788888 799999999988753 49999999999999988 9999
Q ss_pred EecCccchhcccccccccCCeEEEeecCCC
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGDWGYN 241 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~ 241 (268)
|||+.+|+.+ |+.+|+.+++++++..
T Consensus 158 iGD~~~Di~~----a~~aG~~~~~~~~~~~ 183 (190)
T 2fi1_A 158 IGDRPIDIEA----GQAAGLDTHLFTSIVN 183 (190)
T ss_dssp EESSHHHHHH----HHHTTCEEEECSCHHH
T ss_pred EcCCHHHHHH----HHHcCCeEEEECCCCC
Confidence 9999999999 9999999999987753
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-22 Score=161.47 Aligned_cols=102 Identities=11% Similarity=0.146 Sum_probs=86.2
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
.+++||+.++| +++|++++++||++...+...+....|+..+|+.+++++. ||+|+++..+.++++++|++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 169 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 46889999999 5789999999999877665555441366777999988752 5999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCCCCH
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 243 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~ 243 (268)
||||+.+|+.+ |+++|+.+++++++....
T Consensus 170 ~vgD~~~Di~~----a~~aG~~~~~~~~~~~~~ 198 (206)
T 2b0c_A 170 FFDDNADNIEG----ANQLGITSILVKDKTTIP 198 (206)
T ss_dssp EEESCHHHHHH----HHTTTCEEEECCSTTHHH
T ss_pred EeCCCHHHHHH----HHHcCCeEEEecCCchHH
Confidence 99999999999 999999999999875433
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=148.76 Aligned_cols=122 Identities=11% Similarity=0.110 Sum_probs=93.6
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCC--CCCCe--EEecC--------CCChH-HHHHHHHhc
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVT--IPPDR--IYGLG--------TGPKV-EVLKQLQKK 201 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~--~~f~~--i~~~~--------~~pk~-~~~~~~~~~ 201 (268)
..++||+.++| +++|++++|+||+....++..++. +|+. .+|.. +++.+ .+|.+ ..++.+.+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADY-LNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-cCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 35889999999 689999999999999999999999 7984 24432 22222 12443 355666677
Q ss_pred CCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 202 PELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 202 ~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+++.|+++++|||+.+|+.+ + ++|+.++++.++.++...... ..|++++.++.||.++|
T Consensus 160 ~~~~~~~~~~vGD~~~Di~~----~-~~G~~~~~v~~~~~~~~~~~~--~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 160 KGLIDGEVIAIGDGYTDYQL----Y-EKGYATKFIAYMEHIEREKVI--NLSKYVARNVAELASLI 218 (219)
T ss_dssp GGGCCSEEEEEESSHHHHHH----H-HHTSCSEEEEECSSCCCHHHH--HHCSEEESSHHHHHHHH
T ss_pred hCCCCCCEEEEECCHhHHHH----H-hCCCCcEEEeccCccccHHHH--hhcceeeCCHHHHHHhh
Confidence 79999999999999999999 8 589998888877554333322 35889999999998875
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-21 Score=152.17 Aligned_cols=101 Identities=19% Similarity=0.136 Sum_probs=90.9
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCC-HHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~-~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
..+++||+.++| +++|++++|+||++ ...+...++. +|+..+|+.++... +|||+.++.+.+++++.|++|+||
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~-~gl~~~f~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~~i 143 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLEL-FDLFRYFVHREIYP-GSKITHFERLQQKTGIPFSQMIFF 143 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHH-TTCTTTEEEEEESS-SCHHHHHHHHHHHHCCCGGGEEEE
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHH-cCcHhhcceeEEEe-CchHHHHHHHHHHcCCChHHEEEE
Confidence 456899999999 68899999999999 7899999999 89999999876543 589999999999999999999999
Q ss_pred ecCccchhcccccccccCCeEEEeecCCCCH
Q 024415 213 EDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 243 (268)
Q Consensus 213 GDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~ 243 (268)
||+.+|+.+ |+++|+.+|++.+|++..
T Consensus 144 gD~~~Di~~----a~~aG~~~i~v~~g~~~~ 170 (187)
T 2wm8_A 144 DDERRNIVD----VSKLGVTCIHIQNGMNLQ 170 (187)
T ss_dssp ESCHHHHHH----HHTTTCEEEECSSSCCHH
T ss_pred eCCccChHH----HHHcCCEEEEECCCCChH
Confidence 999999999 999999999999997543
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=157.31 Aligned_cols=122 Identities=13% Similarity=0.074 Sum_probs=97.4
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC-----------C---CChHHHHHHH
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----------T---GPKVEVLKQL 198 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~-----------~---~pk~~~~~~~ 198 (268)
...+++||+.++| +++|++++|+||+....++..++. +|+..+|+.+++.+ . +|||++++.+
T Consensus 176 ~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~ 254 (317)
T 4eze_A 176 DRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL 254 (317)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred hCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence 3457999999999 689999999999999999999999 79998888765421 1 3899999999
Q ss_pred HhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 199 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 199 ~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
.++++++|++++||||+.+|+.+ |+++|+.+++ + .. ...... +...+...++.++..+|+
T Consensus 255 ~~~lgv~~~~~i~VGDs~~Di~a----a~~AG~~va~---~-~~-~~~~~~-a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 255 AARLNIATENIIACGDGANDLPM----LEHAGTGIAW---K-AK-PVVREK-IHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHH----HHHSSEEEEE---S-CC-HHHHHH-CCEEESSSCGGGGGGGTC
T ss_pred HHHcCCCcceEEEEeCCHHHHHH----HHHCCCeEEe---C-CC-HHHHHh-cCeeeCCCCHHHHHHHHH
Confidence 99999999999999999999999 9999986665 2 22 233321 333344568888777663
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=145.35 Aligned_cols=119 Identities=9% Similarity=0.046 Sum_probs=95.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC-CeEEecCC-------CChHHHHHHHHhcCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLGT-------GPKVEVLKQLQKKPEL 204 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f-~~i~~~~~-------~pk~~~~~~~~~~~~~ 204 (268)
...+++||+.++| +++ ++++|+||++...+...++. +|+..+| +.+++++. +|+|+.+..+.++++.
T Consensus 66 ~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~ 143 (206)
T 1rku_A 66 ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 143 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHH-cCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHh
Confidence 3567899999999 566 99999999999999999999 8999989 46665432 2888888888888888
Q ss_pred CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEE-EcCHhHHHhhc
Q 024415 205 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQ-LLQLSDFSRKL 267 (268)
Q Consensus 205 ~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~-~~~~~~l~~~l 267 (268)
.|++|+||||+.+|+.+ |+++|+.++ +. ....+... .|+++ ++++.++.++|
T Consensus 144 ~~~~~~~iGD~~~Di~~----a~~aG~~~~-~~----~~~~~~~~--~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 144 LYYRVIAAGDSYNDTTM----LSEAHAGIL-FH----APENVIRE--FPQFPAVHTYEDLKREF 196 (206)
T ss_dssp TTCEEEEEECSSTTHHH----HHHSSEEEE-ES----CCHHHHHH--CTTSCEECSHHHHHHHH
T ss_pred cCCEEEEEeCChhhHHH----HHhcCccEE-EC----CcHHHHHH--HhhhccccchHHHHHHH
Confidence 89999999999999999 999999755 32 22344442 46674 99999988765
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.6e-22 Score=163.55 Aligned_cols=123 Identities=13% Similarity=0.105 Sum_probs=92.5
Q ss_pred cCCCCCChHHHH---HcCCCeEE---------------------------------EEcCCCHHHHHHHHHHhcC-CCCC
Q 024415 137 ANRFYPGIPDAL---KFASSRIY---------------------------------IVTTKQSRFADALLRELAG-VTIP 179 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~---------------------------------ivTn~~~~~~~~~l~~~~g-l~~~ 179 (268)
...++||+.++| ++.|++++ ++||.+ ......++. +| +..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~-~~~~~~~ 162 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPA-CGALCAG 162 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBC-HHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeec-chHHHHH
Confidence 345778888887 68899998 999876 322222222 22 2233
Q ss_pred CCeEEecC----CCChHHHHHHHHhcCCCCCCcEEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCC
Q 024415 180 PDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPR 254 (268)
Q Consensus 180 f~~i~~~~----~~pk~~~~~~~~~~~~~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~ 254 (268)
|+.+++.+ .+||+.+++.++++++++|++|++|||+ .+|+.+ |+.+|+.+++|.+|....++++.....|+
T Consensus 163 ~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~----~~~aG~~~~~v~~g~~~~~~~~~~~~~~~ 238 (250)
T 2c4n_A 163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILA----GFQAGLETILVLSGVSSLDDIDSMPFRPS 238 (250)
T ss_dssp HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHH----HHHTTCEEEEESSSSCCGGGGSSCSSCCS
T ss_pred HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHH----HHHcCCeEEEECCCCCChhhhhhcCCCCC
Confidence 44444433 3599999999999999999999999999 699999 99999999999999776556543335799
Q ss_pred EEEcCHhHHHh
Q 024415 255 IQLLQLSDFSR 265 (268)
Q Consensus 255 ~~~~~~~~l~~ 265 (268)
+++.++.||.+
T Consensus 239 ~v~~~~~el~~ 249 (250)
T 2c4n_A 239 WIYPSVAEIDV 249 (250)
T ss_dssp EEESSGGGCCC
T ss_pred EEECCHHHhhc
Confidence 99999998754
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.9e-20 Score=150.77 Aligned_cols=118 Identities=12% Similarity=0.171 Sum_probs=90.8
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC------------CCChHHH-HH----
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------TGPKVEV-LK---- 196 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~------------~~pk~~~-~~---- 196 (268)
..+++||+.++| +++|++++|+||++...++..++ |+..+ +.+++++ .+|+|.. ++
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 467999999999 68899999999999988888777 56555 7788764 2355553 33
Q ss_pred ---HHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 197 ---QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 197 ---~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.+.++++..|++++||||+.+|+.+ |+++|+.++. +++ .+.+...+ .|++++.++.+|.++|
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~----a~~aG~~~~~--~~~--~~~~~~~~-~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDSVTDVEA----AKLSDLCFAR--DYL--LNECREQN-LNHLPYQDFYEIRKEI 215 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHH----HHTCSEEEEC--HHH--HHHHHHTT-CCEECCSSHHHHHHHH
T ss_pred cHHHHHHHHhccCCeEEEEeCChHHHHH----HHhCCeeeec--hHH--HHHHHHCC-CCeeecCCHHHHHHHH
Confidence 5666778999999999999999999 9999998762 332 23343321 3889999999998765
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.1e-21 Score=173.98 Aligned_cols=107 Identities=18% Similarity=0.087 Sum_probs=88.8
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCC------CHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTK------QSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKP 202 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~------~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~ 202 (268)
...+++||+.++| +++|++++|+||+ ........+. |+..+||.+++++. ||+|+++..+++++
T Consensus 97 ~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~---~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~l 173 (555)
T 3i28_A 97 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC---ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTL 173 (555)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH---HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred hhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh---hhhhheeEEEeccccCCCCCCHHHHHHHHHHc
Confidence 3457999999998 6899999999998 3333333322 66789999999863 69999999999999
Q ss_pred CCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhh
Q 024415 203 ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA 249 (268)
Q Consensus 203 ~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~ 249 (268)
+++|++|+||||+.+|+.+ |+++|+.++++.++....+.+...
T Consensus 174 g~~p~~~~~v~D~~~di~~----a~~aG~~~~~~~~~~~~~~~l~~~ 216 (555)
T 3i28_A 174 KASPSEVVFLDDIGANLKP----ARDLGMVTILVQDTDTALKELEKV 216 (555)
T ss_dssp TCCGGGEEEEESCHHHHHH----HHHHTCEEEECSSHHHHHHHHHHH
T ss_pred CCChhHEEEECCcHHHHHH----HHHcCCEEEEECCCccHHHHHHhh
Confidence 9999999999999999999 999999999999886655555543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.2e-19 Score=142.18 Aligned_cols=118 Identities=12% Similarity=0.048 Sum_probs=94.3
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEec-C-------------CCChHHHHHHHHh
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-G-------------TGPKVEVLKQLQK 200 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~-~-------------~~pk~~~~~~~~~ 200 (268)
.+++||+.++| +++|++++++||+....+...++. +|+..+|+.++.. + ..+|++++..+++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 45789999999 689999999999998888888888 7887666543321 1 1278999999999
Q ss_pred cCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC--HhHHHhhcC
Q 024415 201 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ--LSDFSRKLK 268 (268)
Q Consensus 201 ~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~--~~~l~~~l~ 268 (268)
++++.|++|++|||+.+|+.+ |+.+|+. +++. ....++ ..+++++.+ +.+|..+|+
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~----~~~ag~~-~~~~----~~~~~~---~~a~~v~~~~~~~~l~~~l~ 211 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISM----FKKAGLK-IAFC----AKPILK---EKADICIEKRDLREILKYIK 211 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHH----HHHCSEE-EEES----CCHHHH---TTCSEEECSSCGGGGGGGCC
T ss_pred HcCCCHHHEEEEecChhHHHH----HHHCCCE-EEEC----CCHHHH---hhcceeecchhHHHHHHhhC
Confidence 999999999999999999999 9999996 3432 223443 358899988 999988764
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.6e-20 Score=150.60 Aligned_cols=119 Identities=24% Similarity=0.218 Sum_probs=98.4
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCH---------------HHHHHHHHHhcCCCCCCCeEE-ec-----------C-
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIY-GL-----------G- 187 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~---------------~~~~~~l~~~~gl~~~f~~i~-~~-----------~- 187 (268)
+++||+.++| +++|++++|+||++. ..+...++. +|+. |+.++ +. +
T Consensus 56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--~~~~~~~~~~~~g~~~~~~~~ 132 (218)
T 2o2x_A 56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGVF--VDMVLACAYHEAGVGPLAIPD 132 (218)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTCC--CSEEEEECCCTTCCSTTCCSS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHH-cCCc--eeeEEEeecCCCCceeecccC
Confidence 4678888887 688999999999988 688888999 7885 66543 32 2
Q ss_pred ---CCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeE-EEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 188 ---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 188 ---~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~-v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
.||+|.+++.+.++++++|++++||||+.+|+.+ |+++|+.+ +++.+|+...+. ....|++++.++.+|
T Consensus 133 ~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~----a~~aG~~~~i~v~~g~~~~~~---~~~~~~~~i~~l~el 205 (218)
T 2o2x_A 133 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQA----GKRAGLAQGWLVDGEAAVQPG---FAIRPLRDSSELGDL 205 (218)
T ss_dssp CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHH----HHHTTCSEEEEETCCCEEETT---EEEEEESSHHHHHHH
T ss_pred CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHH----HHHCCCCEeEEEecCCCCccc---ccCCCCEecccHHHH
Confidence 2599999999999999999999999999999999 99999999 999998754332 123688999999998
Q ss_pred Hhhc
Q 024415 264 SRKL 267 (268)
Q Consensus 264 ~~~l 267 (268)
..+|
T Consensus 206 ~~~l 209 (218)
T 2o2x_A 206 LAAI 209 (218)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-20 Score=156.79 Aligned_cols=122 Identities=10% Similarity=0.053 Sum_probs=95.0
Q ss_pred CCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC---eEEecC----CCChHHHHHHHHhcCCCCCCcEE
Q 024415 140 FYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPD---RIYGLG----TGPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 140 ~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~---~i~~~~----~~pk~~~~~~~~~~~~~~~~~~l 210 (268)
++||+.++|+ ++|+++ ++||.+.......+.. .|+..+|+ .+++++ .||+|++++.++++++++|++|+
T Consensus 123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 200 (259)
T 2ho4_A 123 HYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLA-LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV 200 (259)
T ss_dssp BHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEE-ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred CHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcc-cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence 6778888882 289999 9999876554444555 56666665 334443 36999999999999999999999
Q ss_pred EEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 211 FVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 211 ~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+|||+. +|+.+ |+++|+.++++.+|.....+.......|++++.++.++..+|
T Consensus 201 ~iGD~~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 201 MIGDDCRDDVDG----AQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp EEESCTTTTHHH----HHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred EECCCcHHHHHH----HHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 999998 99999 999999999999985433333222357999999999998765
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-21 Score=157.90 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=86.6
Q ss_pred cCCCCCChHHHH---HcC-CCeEEEEcCCCHHHHHHHHHHhcCCCC-CCCeEEecCCCChHHHHHHHHhcCCCCCCcEEE
Q 024415 137 ANRFYPGIPDAL---KFA-SSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~-g~~i~ivTn~~~~~~~~~l~~~~gl~~-~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
..+++||+.++| +++ |++++|+||+++..++..+++ +|+.. +|+ ..+.++++++|++++|
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~~f~--------------~~~~~~l~~~~~~~~~ 137 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEK-YAWVEKYFG--------------PDFLEQIVLTRDKTVV 137 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHH-HHHHHHHHC--------------GGGGGGEEECSCSTTS
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHH-hchHHHhch--------------HHHHHHhccCCccEEE
Confidence 467999999999 577 999999999998888888888 68876 775 4456677888999999
Q ss_pred EecCccc----hhccccccc-ccCCeEEEeecCCCCHHHHHhhcCCCCE-EEcCHh-HHHhhc
Q 024415 212 VEDRLAT----LKNVIKEPE-LDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQLS-DFSRKL 267 (268)
Q Consensus 212 IGDs~~D----i~~~~~~A~-~aG~~~v~v~~g~~~~~~~~~~~~~p~~-~~~~~~-~l~~~l 267 (268)
|||+..| +.+ |+ ++|+.+|++.++++.... ..|++ .+.++. ++..+|
T Consensus 138 vgDs~~dD~~~~~~----a~~~aG~~~i~~~~~~~~~~~-----~~~~~~~v~~~~~~l~~~l 191 (197)
T 1q92_A 138 SADLLIDDRPDITG----AEPTPSWEHVLFTACHNQHLQ-----LQPPRRRLHSWADDWKAIL 191 (197)
T ss_dssp CCSEEEESCSCCCC----SCSSCSSEEEEECCTTTTTCC-----CCTTCEEECCTTSCHHHHH
T ss_pred ECcccccCCchhhh----cccCCCceEEEecCccccccc-----ccccchhhhhHHHHHHHHh
Confidence 9999998 999 99 999999999988764321 23434 789994 777665
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.6e-20 Score=138.44 Aligned_cols=95 Identities=14% Similarity=0.060 Sum_probs=84.0
Q ss_pred HHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC----CCChHHHHHHHHhcCCCCCCcEEEEecCccchhccc
Q 024415 148 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVI 223 (268)
Q Consensus 148 L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~----~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~ 223 (268)
|+++|++++|+||++...+...++. +|+..+|+.+++++ .+|+|++++.+.++.++.|++++||||+..|+.+
T Consensus 30 L~~~G~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~-- 106 (137)
T 2pr7_A 30 AKKNGVGTVILSNDPGGLGAAPIRE-LETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRG-- 106 (137)
T ss_dssp HHHTTCEEEEEECSCCGGGGHHHHH-HHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHH--
T ss_pred HHHCCCEEEEEeCCCHHHHHHHHHH-CChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHH--
Confidence 3688999999999999888899999 79999999999874 3699999999999999999999999999999999
Q ss_pred ccccccCCeEEEeecCCCCHHHHH
Q 024415 224 KEPELDGWNLYLGDWGYNTQKERE 247 (268)
Q Consensus 224 ~~A~~aG~~~v~v~~g~~~~~~~~ 247 (268)
|+++|+.++++.++....+.+.
T Consensus 107 --a~~~G~~~i~~~~~~~~~~~l~ 128 (137)
T 2pr7_A 107 --AVEAGLVGVYYQQFDRAVVEIV 128 (137)
T ss_dssp --HHHHTCEEEECSCHHHHHHHHH
T ss_pred --HHHCCCEEEEeCChHHHHHHHH
Confidence 9999999999988754444443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=155.69 Aligned_cols=118 Identities=14% Similarity=0.114 Sum_probs=93.3
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeE-------Eec----C---CCChHHHHHHHH
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRI-------YGL----G---TGPKVEVLKQLQ 199 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i-------~~~----~---~~pk~~~~~~~~ 199 (268)
..+++||+.++| +++|++++|+||+....++..++. +|+..+|+.. +++ + .+||+++++.+.
T Consensus 254 ~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~ 332 (415)
T 3p96_A 254 QLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFA 332 (415)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHH
T ss_pred hCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHH
Confidence 347999999999 689999999999999999999999 8998776543 222 1 138999999999
Q ss_pred hcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhhc
Q 024415 200 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 267 (268)
Q Consensus 200 ~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~l 267 (268)
++++++|++++||||+.+|+.+ |+++|+.+++ +.....++ .+++.+. ++.++..+|
T Consensus 333 ~~~gi~~~~~i~vGD~~~Di~~----a~~aG~~va~-----~~~~~~~~---~ad~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 333 QRAGVPMAQTVAVGDGANDIDM----LAAAGLGIAF-----NAKPALRE---VADASLSHPYLDTVLFLL 390 (415)
T ss_dssp HHHTCCGGGEEEEECSGGGHHH----HHHSSEEEEE-----SCCHHHHH---HCSEEECSSCTTHHHHHT
T ss_pred HHcCcChhhEEEEECCHHHHHH----HHHCCCeEEE-----CCCHHHHH---hCCEEEccCCHHHHHHHh
Confidence 9999999999999999999999 9999997665 22234443 2456544 666666654
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-21 Score=155.23 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=87.7
Q ss_pred ccCCCCCChHHHH---HcC-CCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEE
Q 024415 136 GANRFYPGIPDAL---KFA-SSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~-g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
...+++||+.++| +++ |++++|+||++...+...++. +|+ |+.+++++ +.++++++|++|+|
T Consensus 70 ~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~-~gl---f~~i~~~~----------~~~~~~~~~~~~~~ 135 (193)
T 2i7d_A 70 LDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEK-YRW---VEQHLGPQ----------FVERIILTRDKTVV 135 (193)
T ss_dssp TTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHH-HHH---HHHHHCHH----------HHTTEEECSCGGGB
T ss_pred ccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHH-hCc---hhhhcCHH----------HHHHcCCCcccEEE
Confidence 3567999999999 577 999999999999888999999 788 88777653 56677889999999
Q ss_pred EecCccc----hhccccccc-ccCCeEEEeecCCCCHHHHHhhcCCCCE-EEcCH-hHHHhhc
Q 024415 212 VEDRLAT----LKNVIKEPE-LDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQL-SDFSRKL 267 (268)
Q Consensus 212 IGDs~~D----i~~~~~~A~-~aG~~~v~v~~g~~~~~~~~~~~~~p~~-~~~~~-~~l~~~l 267 (268)
|||+..| +.+ |+ ++|+.+|++.++++.... ..|++ .+.++ .++..+|
T Consensus 136 vgDs~~dD~~~i~~----A~~~aG~~~i~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 136 LGDLLIDDKDTVRG----QEETPSWEHILFTCCHNRHLV-----LPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp CCSEEEESSSCCCS----SCSSCSSEEEEECCGGGTTCC-----CCTTSCEECSTTSCHHHHH
T ss_pred ECCchhhCcHHHhh----cccccccceEEEEeccCcccc-----cccchHHHhhHHHHHHHHh
Confidence 9999998 999 99 999999999887654322 23444 68888 5566654
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=138.21 Aligned_cols=92 Identities=15% Similarity=-0.050 Sum_probs=77.6
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEe-------c----CC--C-ChHHHHHHHHhc
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG-------L----GT--G-PKVEVLKQLQKK 201 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~-------~----~~--~-pk~~~~~~~~~~ 201 (268)
.++||+.++| +++|++++|+||+....++..++. +|+..+|...+. + .. + +|++.++.+..+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARA-FGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 5799999999 689999999999999999999999 799755543321 1 11 2 678899999999
Q ss_pred CC---CCCCcEEEEecCccchhcccccccccCCeEEE
Q 024415 202 PE---LQGMTLHFVEDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 202 ~~---~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~ 235 (268)
.+ +.|++|++||||.+|+.+ ++.+|+.++.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~~~----~~~ag~~~~~ 203 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDVPL----LEAVTRPIAA 203 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGHHH----HHHSSEEEEE
T ss_pred cCCCcCchhheEEEeCCHhhHHH----HHhCCCeEEE
Confidence 99 999999999999999999 9999987654
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.8e-20 Score=156.45 Aligned_cols=121 Identities=12% Similarity=0.114 Sum_probs=92.6
Q ss_pred CCCCCChHHHHH--cCCCeEEEEcCCCHHH--HHH-HHHHhcCCCCCCCeEEecC----CCChHHHHHHHHhcCCCCCCc
Q 024415 138 NRFYPGIPDALK--FASSRIYIVTTKQSRF--ADA-LLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 138 ~~~~pg~~e~L~--~~g~~i~ivTn~~~~~--~~~-~l~~~~gl~~~f~~i~~~~----~~pk~~~~~~~~~~~~~~~~~ 208 (268)
..++||+.++|+ ++|+++ |+||.+... ... .+.. .++..+|+.+++++ .||+|++++.+.++++++|++
T Consensus 125 ~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 202 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGA-GSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQ 202 (264)
T ss_dssp TCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECH-HHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGG
T ss_pred CcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCC-cHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHH
Confidence 467889998882 488987 999987632 111 1122 23444566666554 369999999999999999999
Q ss_pred EEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 209 LHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 209 ~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
++||||+ .+|+.+ |+++|+.+|+|.+|+...+++......||+++.++.|+.
T Consensus 203 ~~~vGD~~~~Di~~----a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 203 VIMVGDNYETDIQS----GIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp EEEEESCTTTHHHH----HHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred EEEECCCcHHHHHH----HHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 9999999 599999 999999999999998665566543347999999999864
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-18 Score=151.78 Aligned_cols=124 Identities=16% Similarity=0.016 Sum_probs=109.2
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC--eEEecC---------------CCChHHHHHH
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLG---------------TGPKVEVLKQ 197 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~--~i~~~~---------------~~pk~~~~~~ 197 (268)
.+++||+.++| +++|++++|+||+++..+...++. +|+..+|+ .+++++ .||+|+++..
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~-lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~ 292 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-cCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence 47889999999 689999999999999999999999 79999999 788864 3699999999
Q ss_pred HHhcCC--------------CCCCcEEEEecCccchhcccccccccCCeEEEeecCCCC---HHHHHhhcCCCCEEEcCH
Q 024415 198 LQKKPE--------------LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT---QKEREEAASIPRIQLLQL 260 (268)
Q Consensus 198 ~~~~~~--------------~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~---~~~~~~~~~~p~~~~~~~ 260 (268)
+..+++ +.|++|+||||+.+|+.+ |+++||.+|++.+|++. .+.+.. ..|++++.++
T Consensus 293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~a----Ak~AG~~~I~V~~g~~~~~~~~~l~~--~~ad~vi~sl 366 (384)
T 1qyi_A 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLS----AQKIGATFIGTLTGLKGKDAAGELEA--HHADYVINHL 366 (384)
T ss_dssp HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHH----HHHHTCEEEEESCBTTBGGGHHHHHH--TTCSEEESSG
T ss_pred HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHH----HHHcCCEEEEECCCccccccHHHHhh--cCCCEEECCH
Confidence 999988 899999999999999999 99999999999999753 334443 4689999999
Q ss_pred hHHHhhcC
Q 024415 261 SDFSRKLK 268 (268)
Q Consensus 261 ~~l~~~l~ 268 (268)
.+|..+|+
T Consensus 367 ~eL~~~l~ 374 (384)
T 1qyi_A 367 GELRGVLD 374 (384)
T ss_dssp GGHHHHHS
T ss_pred HHHHHHHH
Confidence 99988764
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-18 Score=138.11 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=83.5
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCC---------------CHHHHHHHHHHhcCCCCCCCeEEec-----C----CCC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRIYGL-----G----TGP 190 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~---------------~~~~~~~~l~~~~gl~~~f~~i~~~-----~----~~p 190 (268)
.+++||+.++| +++|++++|+||+ ....+...++. +|+. |+.++.+ + .||
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~v~~s~~~~~~~~~~~KP 117 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDCRKP 117 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSSSTT
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHH-cCCC--eeEEEEcCCCCcccccccCC
Confidence 45789999988 6889999999998 67788899999 7986 8887632 2 259
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHH
Q 024415 191 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER 246 (268)
Q Consensus 191 k~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~ 246 (268)
+|++++.+.++++++|++++||||+..|+.+ |+++|+.+|++.++....++.
T Consensus 118 ~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~----A~~aG~~~i~v~~~~~~~~~~ 169 (176)
T 2fpr_A 118 KVKLVERYLAEQAMDRANSYVIGDRATDIQL----AENMGINGLRYDRETLNWPMI 169 (176)
T ss_dssp SCGGGGGGC----CCGGGCEEEESSHHHHHH----HHHHTSEEEECBTTTBCHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHH----HHHcCCeEEEEcCCcccHHHH
Confidence 9999999999999999999999999999999 999999999999885444443
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.73 E-value=3.7e-19 Score=151.82 Aligned_cols=111 Identities=21% Similarity=0.205 Sum_probs=89.0
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
..+++||+.++| +++|++++|+||++...+...++. +|+..+|+.++. .+|..+++.+... ++|+|||
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~i~~---~~K~~~~~~l~~~-----~~~~~vG 231 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDLVIAEVLP---HQKSEEVKKLQAK-----EVVAFVG 231 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCT---TCHHHHHHHHTTT-----CCEEEEE
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hCCceeeeecCh---HHHHHHHHHHhcC-----CeEEEEE
Confidence 458999999999 689999999999999999999999 799888877652 3677777777654 7789999
Q ss_pred cCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhc
Q 024415 214 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 267 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l 267 (268)
|+.+|+.+ |+++|+. +++ +.... . ....|++++ .++.++..+|
T Consensus 232 Ds~~Di~~----a~~ag~~-v~~--~~~~~-~---~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 232 DGINDAPA----LAQADLG-IAV--GSGSD-V---AVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp CTTTCHHH----HHHSSEE-EEE--CCCSC-C---SSCCSSEEESSSCTHHHHHHH
T ss_pred CCHHHHHH----HHHCCee-EEe--CCCCH-H---HHhhCCEEEeCCCHHHHHHHH
Confidence 99999999 9999996 443 32221 1 124689999 9999988765
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.73 E-value=4.1e-18 Score=136.30 Aligned_cols=109 Identities=12% Similarity=0.071 Sum_probs=85.2
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-----C----ChHHHHHHHHhcCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-----G----PKVEVLKQLQKKPE 203 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-----~----pk~~~~~~~~~~~~ 203 (268)
...+++||+.++| +++|++++|+||+....++.. +. +|+..+++.+...+. . .|..+++.+
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l----- 148 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KE-LGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF----- 148 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TT-TSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG-----
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HH-cCchhheeeEEeeCCceECCcCCccCHHHHHHhc-----
Confidence 4457899999999 689999999999998888888 88 798776655554432 1 233444444
Q ss_pred CCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 204 LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 204 ~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+|++|++|||+.+|+.+ |+.+|+. |++.++.. .+++++.++.|+.++|
T Consensus 149 -~~~~~i~iGD~~~Di~~----~~~ag~~-v~~~~~~~----------~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 149 -RDGFILAMGDGYADAKM----FERADMG-IAVGREIP----------GADLLVKDLKELVDFI 196 (201)
T ss_dssp -TTSCEEEEECTTCCHHH----HHHCSEE-EEESSCCT----------TCSEEESSHHHHHHHH
T ss_pred -CcCcEEEEeCCHHHHHH----HHhCCce-EEECCCCc----------cccEEEccHHHHHHHH
Confidence 88999999999999999 9999996 56654432 5789999999998876
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=7.5e-19 Score=151.13 Aligned_cols=124 Identities=14% Similarity=0.184 Sum_probs=95.2
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHH--H-HHHHHhcC-CCCCCCeEEecC----CCChHHHHHHHHhcCCCCCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFA--D-ALLRELAG-VTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~--~-~~l~~~~g-l~~~f~~i~~~~----~~pk~~~~~~~~~~~~~~~~ 207 (268)
.++|++.++| +++|+ ++++||.+.... . ..+.. +| +..+|+.+++++ .||+|.+++.++++++++|+
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~ 233 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPG-TGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA 233 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEEC-HHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCC-CcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence 5678888887 56788 999999875432 1 11222 22 333455544443 35999999999999999999
Q ss_pred cEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHh------hcCCCCEEEcCHhHHHhhcC
Q 024415 208 TLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREE------AASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 208 ~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~------~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++||||+. +|+.+ |+++|+.+++|.+|++..+++.. ....|++++.++.||..+|+
T Consensus 234 e~l~vGD~~~~Di~~----a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 234 RTLMVGDRLETDILF----GHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp GEEEEESCTTTHHHH----HHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HEEEECCCchHHHHH----HHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 999999996 99999 99999999999999887766653 33579999999999988774
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-18 Score=146.36 Aligned_cols=124 Identities=16% Similarity=0.147 Sum_probs=93.3
Q ss_pred CCCCChHHHHH--cCCCeEEEEcCCCHHHHHH---HHHHhcCCCCCCCeEEecC-----CCChHHHHHHHHhcCCCCCCc
Q 024415 139 RFYPGIPDALK--FASSRIYIVTTKQSRFADA---LLRELAGVTIPPDRIYGLG-----TGPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 139 ~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~---~l~~~~gl~~~f~~i~~~~-----~~pk~~~~~~~~~~~~~~~~~ 208 (268)
.++|++.++++ ..|+++ ++||.+...... .++. .++..+|+.+++.+ .+||+.+++.++++++++|++
T Consensus 137 ~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e 214 (271)
T 1vjr_A 137 LTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDA-GSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER 214 (271)
T ss_dssp CCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECH-HHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGG
T ss_pred cCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccc-cHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCce
Confidence 46678777772 678887 899876432111 1111 12223344443333 259999999999999999999
Q ss_pred EEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++|||+ .+|+.+ |+.+|+.++++.||+...+++......|++++.++.+|.++|+
T Consensus 215 ~i~iGD~~~nDi~~----a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 215 MAMVGDRLYTDVKL----GKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp EEEEESCHHHHHHH----HHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred EEEECCCcHHHHHH----HHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 9999999 599999 9999999999999988777776544579999999999999875
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-17 Score=129.95 Aligned_cols=106 Identities=12% Similarity=0.031 Sum_probs=85.9
Q ss_pred HHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccc
Q 024415 145 PDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 224 (268)
Q Consensus 145 ~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~ 224 (268)
.+.|+++|++++++||++...++..++. +|+..+|+.+ +|||++++.+.++++++|++++||||+.+|+.+
T Consensus 40 l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~--- 110 (164)
T 3e8m_A 40 IFWAHNKGIPVGILTGEKTEIVRRRAEK-LKVDYLFQGV-----VDKLSAAEELCNELGINLEQVAYIGDDLNDAKL--- 110 (164)
T ss_dssp HHHHHHTTCCEEEECSSCCHHHHHHHHH-TTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHH---
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHH-cCCCEeeccc-----CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHH---
Confidence 3555889999999999999999999999 7997766653 799999999999999999999999999999999
Q ss_pred cccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC------HhHHHhhc
Q 024415 225 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 267 (268)
Q Consensus 225 ~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~------~~~l~~~l 267 (268)
|+++|+.++.. + ..+..++ .+++++.+ +.++.+.+
T Consensus 111 -~~~ag~~~~~~-~---~~~~~~~---~ad~v~~~~~~~g~~~e~~~~l 151 (164)
T 3e8m_A 111 -LKRVGIAGVPA-S---APFYIRR---LSTIFLEKRGGEGVFREFVEKV 151 (164)
T ss_dssp -HTTSSEEECCT-T---SCHHHHT---TCSSCCCCCTTTTHHHHHHHHH
T ss_pred -HHHCCCeEEcC-C---hHHHHHH---hCcEEeccCCCCcHHHHHHHHH
Confidence 99999966542 2 2234443 46787777 66655543
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.5e-17 Score=132.03 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=86.8
Q ss_pred hHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccc
Q 024415 144 IPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 ~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~ 223 (268)
+.+.|+++|++++|+||++...++..++. +|+..+|+.+ .+||++++.+.++++++|++|+||||+.+|+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgl~~~f~~~-----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~-- 125 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-LGIEHLFQGR-----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPV-- 125 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCSEEECSC-----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH--
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-cCCHHHhcCc-----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHH--
Confidence 33556899999999999999999999999 7998777765 689999999999999999999999999999999
Q ss_pred ccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC------HhHHHhhc
Q 024415 224 KEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 267 (268)
Q Consensus 224 ~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~------~~~l~~~l 267 (268)
|+++|+.++ +.. ....... .+++++.+ +.++.+.|
T Consensus 126 --~~~ag~~~~-~~~---~~~~~~~---~ad~v~~~~~~~G~~~~l~~~l 166 (189)
T 3mn1_A 126 --IRRVGLGMA-VAN---AASFVRE---HAHGITRAQGGEGAAREFCELI 166 (189)
T ss_dssp --HHHSSEEEE-CTT---SCHHHHH---TSSEECSSCTTTTHHHHHHHHH
T ss_pred --HHHCCCeEE-eCC---ccHHHHH---hCCEEecCCCCCcHHHHHHHHH
Confidence 999998644 322 2234433 46788888 56666543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-18 Score=144.45 Aligned_cols=124 Identities=14% Similarity=0.170 Sum_probs=94.7
Q ss_pred CCCCCChHHHHH--cCCCeEEEEcCCCHHHH--HHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFA--DALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 138 ~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~--~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
..++||+.++|+ ++|+++ |+||++.... ...+....++..+|+.+++++. ||+|++++.+.++ .+|+++
T Consensus 129 ~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~ 205 (263)
T 1zjj_A 129 DLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEEL 205 (263)
T ss_dssp TCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEE
T ss_pred CCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccE
Confidence 357889999882 389998 9999876432 1111110123344666666543 6999999999988 899999
Q ss_pred EEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 210 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 210 l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+||||+. +|+.+ |+++|+.+++|.+|+...+++......|++++.++.+|.++|+
T Consensus 206 ~~VGD~~~~Di~~----A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 206 WMVGDRLDTDIAF----AKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp EEEESCTTTHHHH----HHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred EEECCChHHHHHH----HHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 9999995 99999 9999999999999987777766543479999999999988774
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-18 Score=139.23 Aligned_cols=93 Identities=11% Similarity=-0.030 Sum_probs=70.9
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeE-------EecCCCChHHHHHHHHhcCCCCCCcE
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRI-------YGLGTGPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i-------~~~~~~pk~~~~~~~~~~~~~~~~~~ 209 (268)
+.||+.++| +++|++++|+||++.......++. +..+|+.+ .....||+|+++..+++++++ |
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~---l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~ 161 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT---LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R 161 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH---HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH---HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence 567888887 688999999999976544444433 12233333 122346999999999998888 6
Q ss_pred EEEecCccchhcccccccccCCeEEEeecCCCCH
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ 243 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~ 243 (268)
+||||+..|+.+ |+++|+.+|++.+|++..
T Consensus 162 l~VGDs~~Di~a----A~~aG~~~i~v~~g~~~~ 191 (211)
T 2b82_A 162 IFYGDSDNDITA----ARDVGARGIRILRASNST 191 (211)
T ss_dssp EEEESSHHHHHH----HHHTTCEEEECCCCTTCS
T ss_pred EEEECCHHHHHH----HHHCCCeEEEEecCCCCc
Confidence 999999999999 999999999999987644
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.3e-16 Score=121.55 Aligned_cols=103 Identities=14% Similarity=0.053 Sum_probs=75.8
Q ss_pred ccCCCCCChHHHHH--cCCCeEEEEcCC---CH--HHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDALK--FASSRIYIVTTK---QS--RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L~--~~g~~i~ivTn~---~~--~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~ 208 (268)
...+++||+.++|+ +.+++++|+||+ +. ......+..++++..+|+.+++++.. .. ++
T Consensus 66 ~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-----------~l----~~ 130 (180)
T 3bwv_A 66 RNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-----------II----LA 130 (180)
T ss_dssp GSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG-----------GB----CC
T ss_pred ccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC-----------ee----cc
Confidence 45689999999992 335999999998 42 22344455535776778888887651 11 45
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|++||||..|+.. | +| .+|++.++++.. ..|++.+.++.||..+|
T Consensus 131 ~l~ieDs~~~i~~----a--aG-~~i~~~~~~~~~-------~~~~~~i~~~~el~~~l 175 (180)
T 3bwv_A 131 DYLIDDNPKQLEI----F--EG-KSIMFTASHNVY-------EHRFERVSGWRDVKNYF 175 (180)
T ss_dssp SEEEESCHHHHHH----C--SS-EEEEECCGGGTT-------CCSSEEECSHHHHHHHH
T ss_pred cEEecCCcchHHH----h--CC-CeEEeCCCcccC-------CCCceecCCHHHHHHHH
Confidence 5999999999865 4 68 999998876421 35889999999988775
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3e-18 Score=144.43 Aligned_cols=114 Identities=15% Similarity=0.131 Sum_probs=88.3
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEE
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
...+++||+.++| +++|++++++||++...++..++. +|+..+|+.++ |+....+.++++..|++|+||
T Consensus 133 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~-------p~~k~~~~~~l~~~~~~~~~V 204 (263)
T 2yj3_A 133 ISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKE-LNIQEYYSNLS-------PEDKVRIIEKLKQNGNKVLMI 204 (263)
Confidence 3457999999999 688999999999999999999999 89999998776 222334444556667788999
Q ss_pred ecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhcC
Q 024415 213 EDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKLK 268 (268)
Q Consensus 213 GDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l~ 268 (268)
||+.+|+.+ |+++|+ .+.||+... ... ..||+++ .++.+|..+++
T Consensus 205 GD~~~D~~a----a~~Agv---~va~g~~~~--~~~--~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 205 GDGVNDAAA----LALADV---SVAMGNGVD--ISK--NVADIILVSNDIGTLLGLIK 251 (263)
Confidence 999999999 999996 455564322 221 3588999 89999887653
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-16 Score=124.77 Aligned_cols=106 Identities=16% Similarity=0.135 Sum_probs=84.8
Q ss_pred hHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccc
Q 024415 144 IPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 ~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~ 223 (268)
+.+.|+++|++++|+||++...++..++. +|+. ++.. .+||+++++.+.+++++++++++||||+.+|+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-lgi~-----~~~~-~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~-- 117 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARK-LKIP-----VLHG-IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPC-- 117 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHH-HTCC-----EEES-CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH--
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHH-cCCe-----eEeC-CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHH--
Confidence 34556899999999999999999999999 7986 3332 2799999999999999999999999999999999
Q ss_pred ccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC------HhHHHhhc
Q 024415 224 KEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 267 (268)
Q Consensus 224 ~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~------~~~l~~~l 267 (268)
++.+|+.++ +.. .. ...+. .+++++.+ +.++.++|
T Consensus 118 --~~~ag~~v~-~~~--~~-~~~~~---~ad~v~~~~~~~g~~~~l~~~l 158 (176)
T 3mmz_A 118 --FALVGWPVA-VAS--AH-DVVRG---AARAVTTVPGGDGAIREIASWI 158 (176)
T ss_dssp --HHHSSEEEE-CTT--CC-HHHHH---HSSEECSSCTTTTHHHHHHHHH
T ss_pred --HHHCCCeEE-CCC--hh-HHHHH---hCCEEecCCCCCcHHHHHHHHH
Confidence 999997544 322 22 33333 36788888 77777654
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.67 E-value=6.2e-17 Score=131.91 Aligned_cols=100 Identities=11% Similarity=0.007 Sum_probs=82.0
Q ss_pred hHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccc
Q 024415 144 IPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVI 223 (268)
Q Consensus 144 ~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~ 223 (268)
+.+.|+++|++++|+||++...++..++. +|+..+|+.+ +||+++++.++++++++|++|+||||+.+|+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~-lgi~~~f~~~-----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~-- 155 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANT-LGITHLYQGQ-----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV-- 155 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-HTCCEEECSC-----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH--
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCchhhccc-----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH--
Confidence 34566899999999999999999999999 7998777654 799999999999999999999999999999999
Q ss_pred ccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCH
Q 024415 224 KEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 260 (268)
Q Consensus 224 ~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~ 260 (268)
++++|+.++ +..+ ....+ ..+++++.+.
T Consensus 156 --~~~ag~~~a-~~~~---~~~~~---~~Ad~v~~~~ 183 (211)
T 3ij5_A 156 --MAQVGLSVA-VADA---HPLLL---PKAHYVTRIK 183 (211)
T ss_dssp --HTTSSEEEE-CTTS---CTTTG---GGSSEECSSC
T ss_pred --HHHCCCEEE-eCCc---cHHHH---hhCCEEEeCC
Confidence 999998654 3322 12222 2467887775
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.4e-17 Score=126.48 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=79.8
Q ss_pred HHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccc
Q 024415 147 ALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 147 ~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A 226 (268)
.|+++|++++|+||++...++..++. +|+..+|+. .+|++++++.+.++++++|++++||||+.+|+.+ |
T Consensus 47 ~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~----a 116 (162)
T 2p9j_A 47 LLQKMGITLAVISGRDSAPLITRLKE-LGVEEIYTG-----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEV----M 116 (162)
T ss_dssp HHHTTTCEEEEEESCCCHHHHHHHHH-TTCCEEEEC-----C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHH----H
T ss_pred HHHHCCCEEEEEeCCCcHHHHHHHHH-cCCHhhccC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----H
Confidence 34788999999999999999999999 798765542 4699999999999999999999999999999999 9
Q ss_pred cccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 227 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 227 ~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
+++|+.+++ .++ ...+.. .+++++.++.+
T Consensus 117 ~~ag~~~~~-~~~---~~~~~~---~a~~v~~~~~~ 145 (162)
T 2p9j_A 117 KKVGFPVAV-RNA---VEEVRK---VAVYITQRNGG 145 (162)
T ss_dssp HHSSEEEEC-TTS---CHHHHH---HCSEECSSCSS
T ss_pred HHCCCeEEe-cCc---cHHHHh---hCCEEecCCCC
Confidence 999998664 333 234433 37798888654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-16 Score=138.10 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=93.0
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEe-----------cCC---CChHHHHHHH
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG-----------LGT---GPKVEVLKQL 198 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~-----------~~~---~pk~~~~~~~ 198 (268)
...+++||+.++| +++|++++|+||+....++..++. +|+..+|+..+. .+. +|||++++.+
T Consensus 175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~-lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ-LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 3467999999999 689999999999999999999999 799877765421 122 3899999999
Q ss_pred HhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 199 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 199 ~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.++++++|++|++|||+.+|+.+ |+.+|+.+++ . .....++. +...+...++.++..+|
T Consensus 254 ~~~lgi~~~~~v~vGDs~nDi~~----a~~aG~~va~--~---~~~~~~~~-a~~v~~~~~l~~v~~~L 312 (335)
T 3n28_A 254 AQQYDVEIHNTVAVGDGANDLVM----MAAAGLGVAY--H---AKPKVEAK-AQTAVRFAGLGGVVCIL 312 (335)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHH----HHHSSEEEEE--S---CCHHHHTT-SSEEESSSCTHHHHHHH
T ss_pred HHHcCCChhhEEEEeCCHHHHHH----HHHCCCeEEe--C---CCHHHHhh-CCEEEecCCHHHHHHHH
Confidence 99999999999999999999999 9999996654 2 22344432 22223445566555544
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-18 Score=143.26 Aligned_cols=109 Identities=19% Similarity=0.121 Sum_probs=84.5
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDR 215 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs 215 (268)
+++||+.++| +++|++++|+||++...+...++. +|+..+|+.+++.+ |...++.+.+.+ ++++|||+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-~gl~~~f~~~~~~~---k~~~~k~~~~~~-----~~~~vGD~ 214 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEE-LGLDDYFAEVLPHE---KAEKVKEVQQKY-----VTAMVGDG 214 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSEEECSCCGGG---HHHHHHHHHTTS-----CEEEEECT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCChhHhHhcCHHH---HHHHHHHHHhcC-----CEEEEeCC
Confidence 6889999998 688999999999999999999999 79998888877653 455555555443 67999999
Q ss_pred ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhc
Q 024415 216 LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 267 (268)
Q Consensus 216 ~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l 267 (268)
.+|+.+ |+.+|+ .+.+|........ .+++++ +++.++.++|
T Consensus 215 ~nDi~~----~~~Ag~---~va~~~~~~~~~~----~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 215 VNDAPA----LAQADV---GIAIGAGTDVAVE----TADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp TTTHHH----HHHSSE---EEECSCCSSSCCC----SSSEECSSCCTHHHHHHH
T ss_pred chhHHH----HHhCCc---eEEecCCcHHHHh----hCCEEEeCCCHHHHHHHH
Confidence 999999 999996 4445543332222 355666 8899887765
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=9.9e-16 Score=128.76 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=67.7
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHH----hhcCCCCEEEcCHhHH
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKERE----EAASIPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~----~~~~~p~~~~~~~~~l 263 (268)
+|+|.+++.+.+.++++|+++++|||+ .+|+.+ |+++|+.+++|.+|+...+.+. .....||+++.++.+|
T Consensus 187 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~----~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAA----GKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHH----HHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred CCCHHHHHHHHHHhCCCchhEEEECCCchHHHHH----HHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 589999999999999999999999999 599999 9999999999999987766665 4445799999999999
Q ss_pred HhhcC
Q 024415 264 SRKLK 268 (268)
Q Consensus 264 ~~~l~ 268 (268)
.++|+
T Consensus 263 ~~~l~ 267 (268)
T 3qgm_A 263 VEALE 267 (268)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 99874
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-16 Score=126.75 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=79.9
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
+.|+++|++++|+||++...++..++. +|+..+|+.+ +||+.+++.++++++++|++++||||+.+|+.+
T Consensus 62 ~~L~~~G~~~~ivT~~~~~~~~~~l~~-lgi~~~~~~~-----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~---- 131 (195)
T 3n07_A 62 KALMNAGIEIAIITGRRSQIVENRMKA-LGISLIYQGQ-----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPV---- 131 (195)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHHHH-TTCCEEECSC-----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHH----
T ss_pred HHHHHCCCEEEEEECcCHHHHHHHHHH-cCCcEEeeCC-----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHH----
Confidence 455889999999999999999999999 7987665533 799999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
++.+|+.++ +. +.....+. .+++++.+
T Consensus 132 ~~~ag~~va-~~---na~~~~~~---~ad~v~~~ 158 (195)
T 3n07_A 132 MEKVALRVC-VA---DGHPLLAQ---RANYVTHI 158 (195)
T ss_dssp HTTSSEEEE-CT---TSCHHHHH---HCSEECSS
T ss_pred HHHCCCEEE-EC---ChHHHHHH---hCCEEEcC
Confidence 999998654 32 22334443 36677766
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.5e-16 Score=124.89 Aligned_cols=105 Identities=17% Similarity=0.159 Sum_probs=84.9
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
+.|+++|++++|+||++...+...++. +|+..+|+.+ +|||++++.+.++++++|++++||||+.+|+.+
T Consensus 56 ~~L~~~g~~~~ivTn~~~~~~~~~l~~-lgl~~~~~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~---- 125 (191)
T 3n1u_A 56 KLLMAAGIQVAIITTAQNAVVDHRMEQ-LGITHYYKGQ-----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPL---- 125 (191)
T ss_dssp HHHHHTTCEEEEECSCCSHHHHHHHHH-HTCCEEECSC-----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----
T ss_pred HHHHHCCCeEEEEeCcChHHHHHHHHH-cCCccceeCC-----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHH----
Confidence 445789999999999999999999999 7998766654 799999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC------HhHHHhhc
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ------LSDFSRKL 267 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~------~~~l~~~l 267 (268)
++.+|+.++ +..+ . ..... .+++++.+ +.++.++|
T Consensus 126 ~~~ag~~~~-~~~~--~-~~~~~---~ad~v~~~~~~~g~~~~l~~~l 166 (191)
T 3n1u_A 126 IQQVGLGVA-VSNA--V-PQVLE---FADWRTERTGGRGAVRELCDLI 166 (191)
T ss_dssp HHHSSEEEE-CTTC--C-HHHHH---HSSEECSSCTTTTHHHHHHHHH
T ss_pred HHHCCCEEE-eCCc--c-HHHHH---hCCEEecCCCCCcHHHHHHHHH
Confidence 999998763 3322 2 33333 36688877 55555543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.3e-18 Score=143.27 Aligned_cols=75 Identities=11% Similarity=0.065 Sum_probs=63.8
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+||+.+++.+.+.++++|++|++|||+. +|+.+ |+.+|+.+++|.+|.....+.......|++++.++.|+.++|
T Consensus 190 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~----a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGG----AQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHH----HHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHH----HHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 5999999999999999999999999998 99999 999999999999984433332222246999999999998765
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-15 Score=128.38 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=65.7
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
||+|.+++.+.++++++|+++++|||+ .+|+.+ |+++|+.+++|.||+...+++...+..||+++.++.+|.
T Consensus 182 Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~----a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 182 KPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMA----GINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHH----HHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred CCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHH----HHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 589999999999999999999999999 699999 999999999999998888777765558999999999874
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=127.00 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=61.7
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecC-ccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs-~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
+|++.+++.+++.++++++++++|||+ .+|+.+ |+.+|+.+++++||++..++++..+..||+++.++.||.+-
T Consensus 183 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~----~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~ 257 (266)
T 3pdw_A 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDIMA----GINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPY 257 (266)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHH----HHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHH
T ss_pred CCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHH----HHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHH
Confidence 488999999999999999999999999 799999 99999999999999877777665444799999999998753
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-16 Score=122.68 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=80.2
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
+.|+++|++++++||.+...+...++. +|+..+|+ ..+||+++++.+.++++++|++++||||+.+|+.+
T Consensus 45 ~~L~~~G~~~~i~Tg~~~~~~~~~~~~-lgl~~~~~-----~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~---- 114 (180)
T 1k1e_A 45 KMLMDADIQVAVLSGRDSPILRRRIAD-LGIKLFFL-----GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPA---- 114 (180)
T ss_dssp HHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCEEEE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----
T ss_pred HHHHHCCCeEEEEeCCCcHHHHHHHHH-cCCceeec-----CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----
Confidence 344789999999999999999999999 79876553 23699999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCH
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 260 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~ 260 (268)
++.+|+.++. .+ ....... .+++++.+.
T Consensus 115 ~~~ag~~~~~-~~---~~~~~~~---~ad~v~~~~ 142 (180)
T 1k1e_A 115 FAACGTSFAV-AD---APIYVKN---AVDHVLSTH 142 (180)
T ss_dssp HHHSSEEEEC-TT---SCHHHHT---TSSEECSSC
T ss_pred HHHcCCeEEe-CC---ccHHHHh---hCCEEecCC
Confidence 9999997664 22 2234433 577888775
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-16 Score=139.41 Aligned_cols=90 Identities=21% Similarity=0.237 Sum_probs=77.5
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCC------------HHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHh
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQ------------SRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQK 200 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~------------~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~ 200 (268)
++||+.++| +++|++++|+||.+ ...+...++. +|+. |+.+++++. ||+|+++..+++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~-lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~ 164 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGVP--FQVLVATHAGLNRKPVSGMWDHLQE 164 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH-HTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH-cCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence 679999988 69999999999976 2237788888 7884 899998864 599999999999
Q ss_pred cCC----CCCCcEEEEecCc-----------------cchhcccccccccCCeEEEe
Q 024415 201 KPE----LQGMTLHFVEDRL-----------------ATLKNVIKEPELDGWNLYLG 236 (268)
Q Consensus 201 ~~~----~~~~~~l~IGDs~-----------------~Di~~~~~~A~~aG~~~v~v 236 (268)
+++ +.|++|+||||+. .|+.+ |+++|+.++..
T Consensus 165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~----A~~aGi~f~~p 217 (416)
T 3zvl_A 165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLF----ALNVGLPFATP 217 (416)
T ss_dssp HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHH----HHHHTCCEECH
T ss_pred HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHH----HHHcCCcccCc
Confidence 987 9999999999997 79999 99999988743
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.3e-15 Score=120.40 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=80.4
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
+.|+++|++++|+||++...++..++. +|+..+|+. .+||+++++.+.++++++|++++||||+.+|+.+
T Consensus 63 ~~L~~~g~~v~ivT~~~~~~~~~~l~~-lgl~~~~~~-----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~---- 132 (188)
T 2r8e_A 63 RCALTSDIEVAIITGRKAKLVEDRCAT-LGITHLYQG-----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPV---- 132 (188)
T ss_dssp HHHHTTTCEEEEECSSCCHHHHHHHHH-HTCCEEECS-----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHH----
T ss_pred HHHHHCCCeEEEEeCCChHHHHHHHHH-cCCceeecC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----
Confidence 455789999999999999999999999 798755542 3699999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCH
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 260 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~ 260 (268)
|+++|+.++.. ++ . ..... .+++++.+.
T Consensus 133 a~~ag~~~~~~-~~--~-~~~~~---~ad~v~~~~ 160 (188)
T 2r8e_A 133 MEKVGLSVAVA-DA--H-PLLIP---RADYVTRIA 160 (188)
T ss_dssp HTTSSEEEECT-TS--C-TTTGG---GSSEECSSC
T ss_pred HHHCCCEEEec-Cc--C-HHHHh---cCCEEEeCC
Confidence 99999977642 22 1 23332 477888886
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-14 Score=119.74 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=72.7
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCC---HHHHHHHHHHhcCCC--CCCCeEEecCCCChHHHHHHHHhcCCCCCCc
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQ---SRFADALLRELAGVT--IPPDRIYGLGTGPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~---~~~~~~~l~~~~gl~--~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~ 208 (268)
..+++||+.++| +++|++++|+||++ +..+...|+. +|+. .+|+.+++.+...|+.+...+. ..+. ..
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~-~Gl~~v~~~~vi~~~~~~~K~~~~~~~~-~~~~--~~ 174 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLER-VGAPQATKEHILLQDPKEKGKEKRRELV-SQTH--DI 174 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHH-HTCSSCSTTTEEEECTTCCSSHHHHHHH-HHHE--EE
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHH-cCCCcCCCceEEECCCCCCCcHHHHHHH-HhCC--Cc
Confidence 456889999999 69999999999998 6677788888 7998 7788888876433333333332 2232 23
Q ss_pred EEEEecCccchhccccccc-------c---------cCCeEEEeecCC
Q 024415 209 LHFVEDRLATLKNVIKEPE-------L---------DGWNLYLGDWGY 240 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~-------~---------aG~~~v~v~~g~ 240 (268)
++||||+.+|+.+ |+ + +|+.+|.+-++.
T Consensus 175 ~l~VGDs~~Di~a----A~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~ 218 (258)
T 2i33_A 175 VLFFGDNLSDFTG----FDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM 218 (258)
T ss_dssp EEEEESSGGGSTT----CSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred eEEeCCCHHHhcc----cccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence 7999999999999 73 3 899999998774
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-14 Score=124.12 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=80.0
Q ss_pred CCCChHHHH---HcC-CCeEEEEcCC---------------------CHHHHHHHHHHhcCCCCCCCeE----------E
Q 024415 140 FYPGIPDAL---KFA-SSRIYIVTTK---------------------QSRFADALLRELAGVTIPPDRI----------Y 184 (268)
Q Consensus 140 ~~pg~~e~L---~~~-g~~i~ivTn~---------------------~~~~~~~~l~~~~gl~~~f~~i----------~ 184 (268)
.++++.++| +++ |+++++.|+. ....+...++. .|+..+|..+ +
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEE-YGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHH-HTEEEEEEECCGGGTCCTTEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHH-cCCCEEEEEccccccCCCCce
Confidence 456777776 344 8888888876 55677778888 6886555443 2
Q ss_pred ecC----CCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCH
Q 024415 185 GLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 260 (268)
Q Consensus 185 ~~~----~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~ 260 (268)
+.+ .+||+++++.++++++++|++|++|||+.+|+.+ ++.+|+. +++ +... ...+. .+++++.+.
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~----~~~ag~~-~~~--~~~~-~~~~~---~a~~v~~~~ 270 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRM----LQTVGNG-YLL--KNAT-QEAKN---LHNLITDSE 270 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----HTTSSEE-EEC--TTCC-HHHHH---HCCCBCSSC
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHH----HHhCCcE-EEE--CCcc-HHHHH---hCCEEcCCC
Confidence 222 2499999999999999999999999999999999 9999954 333 4333 34444 256777775
Q ss_pred hH
Q 024415 261 SD 262 (268)
Q Consensus 261 ~~ 262 (268)
.+
T Consensus 271 ~~ 272 (289)
T 3gyg_A 271 YS 272 (289)
T ss_dssp HH
T ss_pred Cc
Confidence 54
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.9e-16 Score=134.44 Aligned_cols=118 Identities=14% Similarity=0.092 Sum_probs=94.7
Q ss_pred CCCChHHHHHcCCCeEEEEcCCCHHHH--H--HHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcC----CCCCC
Q 024415 140 FYPGIPDALKFASSRIYIVTTKQSRFA--D--ALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKP----ELQGM 207 (268)
Q Consensus 140 ~~pg~~e~L~~~g~~i~ivTn~~~~~~--~--~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~----~~~~~ 207 (268)
.++++.+.|+++|++ +|+||++.... . ..++. .++..+|+.+++++. ||+|++++.+.+++ ++.|+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~-~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~ 226 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAI-GGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKR 226 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECH-HHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccC-ChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcc
Confidence 345555566889999 99999976654 2 12344 466677888877763 69999999999999 99999
Q ss_pred cEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHH----hhcCCCCEEEcCHhHH
Q 024415 208 TLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKERE----EAASIPRIQLLQLSDF 263 (268)
Q Consensus 208 ~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~----~~~~~p~~~~~~~~~l 263 (268)
+++||||+. .|+.+ |+++|+.++++.+|+...+++. .....||+++.++.||
T Consensus 227 ~~~~VGD~~~~Di~~----A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 227 EILMVGDTLHTDILG----GNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp GEEEEESCTTTHHHH----HHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred eEEEECCCcHHHHHH----HHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 999999995 99999 9999999999999987766665 4446799999998875
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-13 Score=108.07 Aligned_cols=95 Identities=8% Similarity=0.024 Sum_probs=73.0
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHh-cCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLREL-AGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 224 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~-~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~ 224 (268)
+.|+++|++++|+||. ..+...++.+ +|+. ++.+ ..+|+++++.++++++++|++++||||+.+|+.+
T Consensus 46 ~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-----~~~g-~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~--- 114 (168)
T 3ewi_A 46 SLLKKSGIEVRLISER--ACSKQTLSALKLDCK-----TEVS-VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEEC--- 114 (168)
T ss_dssp HHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----EECS-CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHH---
T ss_pred HHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----EEEC-CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHH---
Confidence 5568899999999999 6778888840 4543 2322 3589999999999999999999999999999999
Q ss_pred cccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 225 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 225 ~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
++.+|+.++ +.. ..+..++ ..+++..+
T Consensus 115 -~~~ag~~~a-~~n---a~~~~k~---~Ad~v~~~ 141 (168)
T 3ewi_A 115 -LKRVGLSAV-PAD---ACSGAQK---AVGYICKC 141 (168)
T ss_dssp -HHHSSEEEE-CTT---CCHHHHT---TCSEECSS
T ss_pred -HHHCCCEEE-eCC---hhHHHHH---hCCEEeCC
Confidence 999998744 533 3345554 46677765
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.37 E-value=6.9e-12 Score=103.16 Aligned_cols=93 Identities=12% Similarity=0.023 Sum_probs=71.2
Q ss_pred EEEEc-CCCHHHHHHHHHHhcCCCCCCCeEEecC--------CCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 155 IYIVT-TKQSRFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 155 i~ivT-n~~~~~~~~~l~~~~gl~~~f~~i~~~~--------~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
++++| +.....+...++. ++ ..|+.+ ++. .+||+.+++.++++++++++++++|||+.+|+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~---- 184 (231)
T 1wr8_A 113 LVIMRETINVETVREIINE-LN--LNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDA---- 184 (231)
T ss_dssp EEECTTTSCHHHHHHHHHH-TT--CSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHH----
T ss_pred EEEECCCCCHHHHHHHHHh-cC--CcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----
Confidence 46677 6677788888887 55 456655 332 2399999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
++.+|+. +++.++ . .+++. .+++++.+..+
T Consensus 185 ~~~ag~~-v~~~~~--~-~~~~~---~a~~v~~~~~e 214 (231)
T 1wr8_A 185 FKVVGYK-VAVAQA--P-KILKE---NADYVTKKEYG 214 (231)
T ss_dssp HHHSSEE-EECTTS--C-HHHHT---TCSEECSSCHH
T ss_pred HHHcCCe-EEecCC--C-HHHHh---hCCEEecCCCc
Confidence 9999987 556443 2 34443 57899888765
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.35 E-value=7.7e-12 Score=105.46 Aligned_cols=107 Identities=12% Similarity=0.002 Sum_probs=71.1
Q ss_pred CChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcC--CCCCCCeEEecCC--------CChHHHHHHHHhcCCCCCCcEEE
Q 024415 142 PGIPDALKFASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLGT--------GPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 142 pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~g--l~~~f~~i~~~~~--------~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
+...+.++....++.++++. .......+. +. +...+..+.+... .+|+.+++.+++.++++++++++
T Consensus 142 ~~~~~~~~~~~~ki~~~~~~--~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~ 218 (279)
T 4dw8_A 142 NDFLTDITLPVAKCLIVGDA--GKLIPVESE-LCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIA 218 (279)
T ss_dssp SCHHHHSCSCCSCEEEESCH--HHHHHHHHH-HHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEE
T ss_pred HHHHHhhcCCceEEEEeCCH--HHHHHHHHH-HHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEE
Confidence 44444445667788777642 233333333 11 3344555555432 28899999999999999999999
Q ss_pred EecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
|||+.+|+.+ ++.+|+ .+.+|. ..++.+.. +++++.+..+
T Consensus 219 ~GD~~NDi~m----~~~ag~---~vam~n-a~~~~k~~---A~~v~~~~~e 258 (279)
T 4dw8_A 219 IGDGYNDLSM----IKFAGM---GVAMGN-AQEPVKKA---ADYITLTNDE 258 (279)
T ss_dssp EECSGGGHHH----HHHSSE---EEECTT-SCHHHHHH---CSEECCCGGG
T ss_pred ECCChhhHHH----HHHcCc---EEEcCC-CcHHHHHh---CCEEcCCCCC
Confidence 9999999999 999995 444453 34455553 5687777553
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-12 Score=112.35 Aligned_cols=96 Identities=16% Similarity=0.083 Sum_probs=77.1
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHH---HHHHHHHh-------cCCCCCCCeEEecCC---CChHHHHHHHHhc
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLREL-------AGVTIPPDRIYGLGT---GPKVEVLKQLQKK 201 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~---~~~~l~~~-------~gl~~~f~~i~~~~~---~pk~~~~~~~~~~ 201 (268)
.+++||+.++| +++|++++|+||++... +...++.. +|+ +|+.+++.+. +|+|+++..+.++
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~p~~~~~~~~~ 264 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGDTRKDDVVKEEIFWK 264 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCCCcHHHHHHHHHHHH
Confidence 34699999999 68999999999998543 34445440 277 5898887653 4999999888877
Q ss_pred CCCCCC-cEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 202 PELQGM-TLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 202 ~~~~~~-~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
.+..+. .++||||+..|+++ |+++|+.+|+|+||
T Consensus 265 ~~~~~~~~~~~vgD~~~di~~----a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 265 HIAPHFDVKLAIDDRTQVVEM----WRRIGVECWQVASG 299 (301)
T ss_dssp HTTTTCEEEEEEECCHHHHHH----HHHTTCCEEECSCC
T ss_pred HhccccceEEEeCCcHHHHHH----HHHcCCeEEEecCC
Confidence 766654 47999999999999 99999999999998
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.6e-12 Score=106.85 Aligned_cols=99 Identities=11% Similarity=0.007 Sum_probs=68.3
Q ss_pred cCCCeEEEE-cCCC-HHHHHHHHHHhcCCCCCCCeEEecCC--------CChHHHHHHHHhcCCCCCCcEEEEecCccch
Q 024415 150 FASSRIYIV-TTKQ-SRFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKPELQGMTLHFVEDRLATL 219 (268)
Q Consensus 150 ~~g~~i~iv-Tn~~-~~~~~~~l~~~~gl~~~f~~i~~~~~--------~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di 219 (268)
...+++.++ +... ....+...+. ++ ..+..+.+... .+|+.+++.+++.++++++++++|||+.+|+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~-~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPA-WN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHH-HT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHH-hc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 677888888 3332 2223344445 33 33444444432 2799999999999999999999999999999
Q ss_pred hcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 220 KNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 220 ~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
.+ ++.+|+ .|++ | |..++.+. .++++..+..+
T Consensus 241 ~m----l~~ag~-~vam--~-na~~~~k~---~A~~v~~s~~e 272 (283)
T 3dao_A 241 EM----LQNAGI-SYAV--S-NARQEVIA---AAKHTCAPYWE 272 (283)
T ss_dssp HH----HHHSSE-EEEE--T-TSCHHHHH---HSSEEECCGGG
T ss_pred HH----HHhCCC-EEEc--C-CCCHHHHH---hcCeECCCCCC
Confidence 99 999995 3444 3 33345555 35688877665
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=2.5e-11 Score=101.83 Aligned_cols=94 Identities=10% Similarity=-0.044 Sum_probs=66.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC----------CCChHHHHHHHHhcCCCCCCcEEEEecCccchhcc
Q 024415 153 SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNV 222 (268)
Q Consensus 153 ~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~----------~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~ 222 (268)
.++.+. .+........+. ++- .|+.+.+.. ..+|+.+++.+++.++++++++++|||+.+|+.+
T Consensus 158 ~ki~~~--~~~~~~~~~~~~-l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m- 231 (274)
T 3fzq_A 158 HKICLW--SNEKVFDEVKDI-LQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVM- 231 (274)
T ss_dssp CEEEEE--CCHHHHHHHHHH-HGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHH-
T ss_pred EEEEEE--cCHHHHHHHHHH-hhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHH-
Confidence 355444 566666676666 443 245444443 1389999999999999999999999999999999
Q ss_pred cccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 223 IKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 223 ~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
++.+|+ .+.+|... ++.++ .+++++.+..+
T Consensus 232 ---~~~ag~---~vam~na~-~~~k~---~A~~v~~~~~e 261 (274)
T 3fzq_A 232 ---FQASDV---TIAMKNSH-QQLKD---IATSICEDIFD 261 (274)
T ss_dssp ---HHTCSE---EEEETTSC-HHHHH---HCSEEECCGGG
T ss_pred ---HHhcCc---eEEecCcc-HHHHH---hhhheeCCCch
Confidence 999995 34445333 45554 36688887664
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.8e-12 Score=109.01 Aligned_cols=62 Identities=21% Similarity=0.157 Sum_probs=49.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
+|+.+++.+++.++++++++++|||+.+|+.+ ++.+|+. |+ .| |..++.+.. +++++.+..+
T Consensus 228 ~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m----~~~ag~~-va--m~-na~~~~k~~---Ad~v~~~~~e 289 (304)
T 3l7y_A 228 HKGWALQQLLKRWNFTSDHLMAFGDGGNDIEM----LKLAKYS-YA--MA-NAPKNVKAA---ANYQAKSNDE 289 (304)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH----HHHCTEE-EE--CT-TSCHHHHHH---CSEECCCGGG
T ss_pred CHHHHHHHHHHHhCcCHHHEEEECCCHHHHHH----HHhcCCe-EE--cC-CcCHHHHHh---ccEEcCCCCc
Confidence 78999999999999999999999999999999 9999963 33 34 334455552 5688777554
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=102.44 Aligned_cols=111 Identities=15% Similarity=0.094 Sum_probs=71.7
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------CChHHHHHHHHhcCCCCCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------~pk~~~~~~~~~~~~~~~~ 207 (268)
.+++++.+++ .....++.+ ++... .....++.+......+..+.+... .+|+.+++.+++.++++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~ki~~-~~~~~-~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 219 (290)
T 3dnp_A 142 QFVESLSDLLMDEPVSAPVIEV-YTEHD-IQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMD 219 (290)
T ss_dssp EECSCHHHHHHHSCCCCSEEEE-ECCGG-GHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred cccCCHHHHHhcCCCCceEEEE-eCCHH-HHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHH
Confidence 3566777877 355677755 43332 223333331112223444444332 2799999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
++++|||+.+|+.+ ++.+|+. |++ | +..++.+.. ++++..+..+
T Consensus 220 ~~i~~GD~~NDi~m----~~~ag~~-vam--~-na~~~~k~~---Ad~v~~s~~e 263 (290)
T 3dnp_A 220 DVVAIGHQYDDLPM----IELAGLG-VAM--G-NAVPEIKRK---ADWVTRSNDE 263 (290)
T ss_dssp GEEEEECSGGGHHH----HHHSSEE-EEC--T-TSCHHHHHH---SSEECCCTTT
T ss_pred HEEEECCchhhHHH----HHhcCCE-EEe--c-CCcHHHHHh---cCEECCCCCc
Confidence 99999999999999 9999973 333 3 333455543 5677777654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.2e-11 Score=100.40 Aligned_cols=81 Identities=17% Similarity=0.271 Sum_probs=64.0
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCH----HHHHHHHHHhcCCCCCCC-eEEec-CCCChHHHHHHHHhc-CCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQS----RFADALLRELAGVTIPPD-RIYGL-GTGPKVEVLKQLQKK-PELQ 205 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~----~~~~~~l~~~~gl~~~f~-~i~~~-~~~pk~~~~~~~~~~-~~~~ 205 (268)
...+++||+.++| +++|+++++|||++. ..+...|+. +|+..+++ .++.. +...|....+.+... +.+
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~i- 175 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKR-LGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEI- 175 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHH-HTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEE-
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHH-cCcCcccccceeccCCCCChHHHHHHHHhcCCCE-
Confidence 4567999999999 689999999999854 588888999 79987663 44433 334777788888776 544
Q ss_pred CCcEEEEecCccchhc
Q 024415 206 GMTLHFVEDRLATLKN 221 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~ 221 (268)
+++|||...|+.+
T Consensus 176 ---v~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 176 ---VLYVGDNLDDFGN 188 (262)
T ss_dssp ---EEEEESSGGGGCS
T ss_pred ---EEEECCChHHhcc
Confidence 5999999999998
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=1e-11 Score=104.63 Aligned_cols=61 Identities=21% Similarity=0.138 Sum_probs=42.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
+|+.+++.+++.++++++++++|||+.+|+.+ ++.+|+ .+..| |..+++++. ++++..+..
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m----~~~ag~---~vam~-na~~~~k~~---A~~v~~~~~ 257 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTM----IKYAGL---GVAMG-NAIDEVKEA---AQAVTLTNA 257 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHH----HHHSTE---ECBC----CCHHHHH---CSCBC----
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHH----HHhcCc---eeecc-CCCHHHHHh---cceeccCCC
Confidence 59999999999999999999999999999999 999996 34444 233455543 445555543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.13 E-value=6.2e-10 Score=91.30 Aligned_cols=61 Identities=10% Similarity=-0.050 Sum_probs=49.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
+|+.+++.+.+.+++.++++++|||+.+|+.+ ++.+|+. +++.++ . +.++. .+++++.+..
T Consensus 153 ~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m----~~~ag~~-va~~n~--~-~~~k~---~a~~v~~~~~ 213 (227)
T 1l6r_A 153 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPM----FQLPVRK-ACPANA--T-DNIKA---VSDFVSDYSY 213 (227)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHH----HTSSSEE-EECTTS--C-HHHHH---HCSEECSCCT
T ss_pred CHHHHHHHHHHHhCcCHHHEEEECCcHHhHHH----HHHcCce-EEecCc--h-HHHHH---hCCEEecCCC
Confidence 89999999999999999999999999999999 9999984 555433 2 34554 3668777654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.13 E-value=7.4e-11 Score=98.63 Aligned_cols=68 Identities=6% Similarity=0.047 Sum_probs=54.8
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH--HHhh
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD--FSRK 266 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~--l~~~ 266 (268)
.||+.+++.+++.++++++++++|||+.+|+.+ ++.+|+.+ ++ + +...+++. .+++++.+..+ +.+.
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~----~~~ag~~v-~~--~-n~~~~~~~---~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISM----LRHAAIGV-AM--G-QAKEDVKA---AADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----HHHSSEEE-EC--T-TSCHHHHH---HSSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----HHHcCceE-Ee--c-CccHHHHh---hCCEEeccCchhhHHHH
Confidence 399999999999999999999999999999999 99999843 33 4 33334443 47799999988 6655
Q ss_pred c
Q 024415 267 L 267 (268)
Q Consensus 267 l 267 (268)
|
T Consensus 255 l 255 (261)
T 2rbk_A 255 M 255 (261)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-10 Score=94.97 Aligned_cols=81 Identities=16% Similarity=0.217 Sum_probs=63.1
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCH----HHHHHHHHHhcCCCCCCC--eEEecCCCChHHHHHHHHh-cCCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQS----RFADALLRELAGVTIPPD--RIYGLGTGPKVEVLKQLQK-KPELQ 205 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~----~~~~~~l~~~~gl~~~f~--~i~~~~~~pk~~~~~~~~~-~~~~~ 205 (268)
...+++||+.++| +++|+++++|||++. ..+...|+. +|+..+++ .++..+...|....+.+.. .+.+
T Consensus 98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~-lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~i- 175 (260)
T 3pct_A 98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKR-LGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDI- 175 (260)
T ss_dssp TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHH-HTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEE-
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHH-cCcCccccceeEecCCCCChHHHHHHHHhcCCCE-
Confidence 4568999999999 689999999999854 588889999 79987774 4444443466677777776 3444
Q ss_pred CCcEEEEecCccchhc
Q 024415 206 GMTLHFVEDRLATLKN 221 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~ 221 (268)
+++|||+..|+.+
T Consensus 176 ---v~~iGD~~~Dl~~ 188 (260)
T 3pct_A 176 ---VLFVGDNLNDFGD 188 (260)
T ss_dssp ---EEEEESSGGGGCG
T ss_pred ---EEEECCChHHcCc
Confidence 5999999999997
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.07 E-value=6.7e-09 Score=86.73 Aligned_cols=62 Identities=10% Similarity=0.047 Sum_probs=50.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
+|+.+++.+++.++++++++++|||+.+|+.+ ++.+|+. |++ | |..+++++ .++++..+..+
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m----~~~ag~~-vam--~-na~~~~k~---~Ad~v~~~~~e 255 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPM----LKAAGIG-VAM--G-NASEKVQS---VADFVTDTVDN 255 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH----HHHSSEE-EEC--T-TSCHHHHH---TCSEECCCTTT
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHH----HHhCCCe-EEe--C-CCcHHHHH---hcCEeeCCCCc
Confidence 89999999999999999999999999999999 9999964 333 4 33456665 36788777553
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.05 E-value=9.8e-11 Score=99.20 Aligned_cols=91 Identities=9% Similarity=-0.085 Sum_probs=58.9
Q ss_pred cCCCeEEEEcCCCHHHHHHHHHHhcC--CCCCCCeEEecC--------CCChHHHHHHHHhcCCCCCCcEEEEecCccch
Q 024415 150 FASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATL 219 (268)
Q Consensus 150 ~~g~~i~ivTn~~~~~~~~~l~~~~g--l~~~f~~i~~~~--------~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di 219 (268)
..++..+++++.+........+. +. +...+..+++.. ..+|+.+++.+++.++++++++++|||+.+|+
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi 238 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQA-MNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDA 238 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHH-HHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred CCCceEEEEeCCCHHHHHHHHHH-HHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhH
Confidence 44555566665554444433332 11 112233333322 12799999999999999999999999999999
Q ss_pred hcccccccccCCeEEEeecCCCCHHHHHhh
Q 024415 220 KNVIKEPELDGWNLYLGDWGYNTQKEREEA 249 (268)
Q Consensus 220 ~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~ 249 (268)
.+ ++.+|+ .|..| |..+++++.
T Consensus 239 ~m----l~~ag~---~vAm~-Na~~~vk~~ 260 (285)
T 3pgv_A 239 EM----LSMAGK---GCIMA-NAHQRLKDL 260 (285)
T ss_dssp HH----HHHSSE---EEECT-TSCHHHHHH
T ss_pred HH----HHhcCC---EEEcc-CCCHHHHHh
Confidence 99 999995 33344 344466553
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.96 E-value=1.4e-09 Score=91.33 Aligned_cols=61 Identities=20% Similarity=0.132 Sum_probs=48.9
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
+|+.+++.+++.++++++++++|||+.+|+.+ ++.+|+. + .+| +...+++.. +++++.+..
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~----~~~ag~~-v--~~~-n~~~~~~~~---a~~v~~~~~ 250 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFM----FEEAGLR-V--AME-NAIEKVKEA---SDIVTLTNN 250 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHH----HTTCSEE-E--ECT-TSCHHHHHH---CSEECCCTT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHH----HHHcCCE-E--Eec-CCCHHHHhh---CCEEEccCC
Confidence 89999999999999999999999999999999 9999983 3 344 333455542 668777644
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.95 E-value=4.2e-09 Score=87.58 Aligned_cols=62 Identities=15% Similarity=0.178 Sum_probs=51.2
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
.|..+++.+++.++++++++++|||+.+|+.+ ++.+|+.++ + | |..++++. .++++..+..+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~m----l~~ag~~va-m--~-na~~~~k~---~A~~v~~~~~~ 244 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEM----LSFVGTGVA-M--G-NAHEEVKR---VADFVTKPVDK 244 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHH----HHHSSEEEE-E--T-TCCHHHHH---TCSEEECCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHH----HHhCCcEEE-e--C-CCcHHHHH---hCCEEeCCCCc
Confidence 89999999999999999999999999999999 999998544 3 4 34456665 36788877664
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.6e-08 Score=86.07 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=66.6
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecC-----C-------C------ChHHHH
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----T-------G------PKVEVL 195 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~-----~-------~------pk~~~~ 195 (268)
..++.||+.+++ +++|++++++|++....++..++. +|+......+++.. . + .+....
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~-~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQ-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHH-TTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHH-cCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 468999999999 699999999999999999999999 79865443444322 0 1 223333
Q ss_pred HHHH--hcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 196 KQLQ--KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 196 ~~~~--~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
.+.. ........+++||||+.+|+.| ++.....-+++..|
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m----~k~l~~advgiaiG 259 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRM----ADGVANVEHILKIG 259 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGT----TTTCSCCSEEEEEE
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHH----HhCccccCeEEEEE
Confidence 2221 1223345678999999999999 77444333344444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-08 Score=88.46 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=67.3
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC------------------------CC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT------------------------GP 190 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~------------------------~p 190 (268)
..+.|++.++| ++ |++++++|+.....+....+. .++ ++.+.+... .+
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 176 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASM-IGV---RGELHGTEVDFDSIAVPEGLREELLSIIDVIASLS 176 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH-TTC---CSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchh-hhh---hhhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence 35789999988 57 999999999887777777776 565 233332210 11
Q ss_pred h---------------HHHHH----------H-HHhcCCCCCCc----EEEEecCccchhccccccccc----CCeEEEe
Q 024415 191 K---------------VEVLK----------Q-LQKKPELQGMT----LHFVEDRLATLKNVIKEPELD----GWNLYLG 236 (268)
Q Consensus 191 k---------------~~~~~----------~-~~~~~~~~~~~----~l~IGDs~~Di~~~~~~A~~a----G~~~v~v 236 (268)
. |..+. + ...+ ++++++ |++|||+.+|+.+ ++.+ |+. |++
T Consensus 177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~-gi~~~~~~~~via~GDs~NDi~m----l~~A~~~~g~~-vam 250 (332)
T 1y8a_A 177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR-GYCESKGIDFPVVVGDSISDYKM----FEAARGLGGVA-IAF 250 (332)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH-HHHHHHTCSSCEEEECSGGGHHH----HHHHHHTTCEE-EEE
T ss_pred hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh-ccChhhcCceEEEEeCcHhHHHH----HHHHhhcCCeE-EEe
Confidence 1 11111 0 0001 456777 9999999999999 9999 985 445
Q ss_pred ecCCCCHHHHHhhcCCCCEEEcC
Q 024415 237 DWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 237 ~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
++ .+.++. .+++++.+
T Consensus 251 -na---~~~lk~---~Ad~v~~~ 266 (332)
T 1y8a_A 251 -NG---NEYALK---HADVVIIS 266 (332)
T ss_dssp -SC---CHHHHT---TCSEEEEC
T ss_pred -cC---CHHHHh---hCcEEecC
Confidence 43 235544 46788776
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.1e-08 Score=87.41 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=63.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC--CCCeEEecC-----C---------------C-ChH
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTI--PPDRIYGLG-----T---------------G-PKV 192 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~--~f~~i~~~~-----~---------------~-pk~ 192 (268)
+++||+.+++ +++|++++|||++....++.+.+. +|+.. ..+.|++.. . + .|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~-lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~ 299 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATD-TNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV 299 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHC-TTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence 4799999999 799999999999999999999998 67642 234455421 0 1 268
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCccchhccccccccc
Q 024415 193 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 229 (268)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~a 229 (268)
..++.+... ......++++|||.+|+.| -+..
T Consensus 300 ~~i~~~~~~-~~~~~~i~a~GDs~~D~~M----L~~~ 331 (385)
T 4gxt_A 300 QTINKLIKN-DRNYGPIMVGGDSDGDFAM----LKEF 331 (385)
T ss_dssp HHHHHHTCC-TTEECCSEEEECSGGGHHH----HHHC
T ss_pred HHHHHHHHh-cCCCCcEEEEECCHhHHHH----HhcC
Confidence 888777654 2334456999999999999 6653
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.1e-09 Score=87.76 Aligned_cols=91 Identities=8% Similarity=-0.115 Sum_probs=77.0
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC--ChHHHHHHHHhcCCCCCCcEEEE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~--pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
..++||+.++| ++. ++++|+|++.+..++.+++. +++..+|+.+++.+.. .| ..+.+.....+..+++|++|
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~-ld~~~~f~~~l~rd~~~~~k-~~~lK~L~~Lg~~~~~~viv 143 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADL-LDRWGVFRARLFRESCVFHR-GNYVKDLSRLGRELSKVIIV 143 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHH-HCCSSCEEEEECGGGCEEET-TEEECCGGGSSSCGGGEEEE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHH-hCCcccEEEEEEcccceecC-CceeeeHhHhCCChhHEEEE
Confidence 46789999999 355 99999999999999999999 7999999999988764 23 44445556778999999999
Q ss_pred ecCccchhcccccccccCCeEEE
Q 024415 213 EDRLATLKNVIKEPELDGWNLYL 235 (268)
Q Consensus 213 GDs~~Di~~~~~~A~~aG~~~v~ 235 (268)
||+..++.+ +.++|+.++.
T Consensus 144 DDs~~~~~~----~~~ngi~i~~ 162 (195)
T 2hhl_A 144 DNSPASYIF----HPENAVPVQS 162 (195)
T ss_dssp ESCGGGGTT----CGGGEEECCC
T ss_pred ECCHHHhhh----CccCccEEee
Confidence 999999999 9999997643
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.1e-09 Score=85.09 Aligned_cols=90 Identities=7% Similarity=-0.136 Sum_probs=74.9
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
..++||+.++| ++. +.++|+|++.+.+++.+++. ++...+|+.+++.+.. .....+.+.....+..+++|++||
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~-ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivd 131 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHH-HCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEEC
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHH-HCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEe
Confidence 46889999999 344 99999999999999999999 7998899999888764 112334444556788999999999
Q ss_pred cCccchhcccccccccCCeE
Q 024415 214 DRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~ 233 (268)
|+..++.+ +.++|+..
T Consensus 132 Ds~~~~~~----~~~ngi~i 147 (181)
T 2ght_A 132 NSPASYVF----HPDNAVPV 147 (181)
T ss_dssp SCGGGGTT----CTTSBCCC
T ss_pred CCHHHhcc----CcCCEeEe
Confidence 99999999 99999974
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=7.9e-08 Score=87.07 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=79.5
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCC-------------CCCCCeEEecCCCChHHH------
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGV-------------TIPPDRIYGLGTGPKVEV------ 194 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl-------------~~~f~~i~~~~~~pk~~~------ 194 (268)
....-|.+...| ++.| ++.++||++...+...++.++|+ .++||.|++...||..-.
T Consensus 244 Yv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr 322 (555)
T 2jc9_A 244 YVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLR 322 (555)
T ss_dssp HBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEE
T ss_pred hcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcce
Confidence 344557788888 6899 99999999999999999985573 367999888776665222
Q ss_pred ----------------------------HHHHHhcCCCCCCcEEEEecCc-cchhccccccc-ccCCeEEEeecC
Q 024415 195 ----------------------------LKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPE-LDGWNLYLGDWG 239 (268)
Q Consensus 195 ----------------------------~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~-~aG~~~v~v~~g 239 (268)
+..+.+..+..+++++||||.. .||.. ++ ..||.+++|..-
T Consensus 323 ~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~----~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 323 QVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILK----SKKRQGWRTFLVIPE 393 (555)
T ss_dssp EEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHH----HHHHHCCEEEEECTT
T ss_pred EeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHh----HHhhcCeEEEEEEec
Confidence 4777777789999999999995 79999 86 899999999863
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=5.5e-08 Score=84.76 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=48.6
Q ss_pred CCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 205 QGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 205 ~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.+++++||||+. +||.+ |+++||.+|+|.+|+..... ......|++++.++.|+.+++
T Consensus 289 ~~~~~~~VGD~~~~Di~~----A~~aG~~ti~V~~G~~~~~~-~~~~~~pd~vi~~l~el~~~i 347 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIG----AQNYGWNSCLVKTGVYNEGD-DLKECKPTLIVNDVFDAVTKT 347 (352)
T ss_dssp TSSEEEEEESCTTTHHHH----HHHHTCEEEECSSSSCCTTC-CCTTCCCSEECSSHHHHHHHH
T ss_pred CcceEEEEecCcHHHHHH----HHHcCCEEEEEccCCCCccc-ccccCCCCEEECCHHHHHHHH
Confidence 579999999998 69999 99999999999999765544 222357999999999988765
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.41 E-value=2e-06 Score=71.08 Aligned_cols=64 Identities=13% Similarity=-0.037 Sum_probs=47.1
Q ss_pred CCChHHHHHHHHhcCCC-CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 188 TGPKVEVLKQLQKKPEL-QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 188 ~~pk~~~~~~~~~~~~~-~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
...|..+++.+++.+++ .++++++|||+.+|+.+ .+.+|+. |++.++ ...+++. .+++++.+..
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~M----l~~ag~~-va~gna--~~~~~~~---~a~~v~~~~~ 241 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPM----FEVVDKV-FIVGSL--KHKKAQN---VSSIIDVLEV 241 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHH----HTTSSEE-EEESSC--CCTTEEE---ESSHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHH----HHhCCcE-EEeCCC--Cccccch---hceEEecccc
Confidence 34899999999999888 89999999999999999 9999974 444433 2233433 2455555444
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=81.83 Aligned_cols=109 Identities=20% Similarity=0.164 Sum_probs=83.0
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
.++.|++.+.+ +++|++++++|+.+...+....+. +|+.. +++.-. ..|.+.++.+..+ ++++|||
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~~----~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 525 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLDL----VIAEVLPHQKSEEVKKLQAK-----EVVAFVG 525 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCSE----EECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCE----EEEeCCHHhHHHHHHHHhhC-----CeEEEEe
Confidence 46889999999 799999999999999999999999 79853 333322 3789999999876 6789999
Q ss_pred cCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhc
Q 024415 214 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 267 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l 267 (268)
|+.+|+.+ .+.||+ ++..|.++. ..+ ..+|+++ +++..+.+.+
T Consensus 526 Dg~ND~~a----l~~A~v---giamg~g~~-~a~---~~AD~vl~~~~~~~i~~~i 570 (645)
T 3j08_A 526 DGINDAPA----LAQADL---GIAVGSGSD-VAV---ESGDIVLIRDDLRDVVAAI 570 (645)
T ss_dssp CSSSCHHH----HHHSSE---EEEECCCSC-CSS---CCSSSEESSCCTTHHHHHH
T ss_pred CCHhHHHH----HHhCCE---EEEeCCCcH-HHH---HhCCEEEecCCHHHHHHHH
Confidence 99999999 999994 444442222 222 3577887 6777776554
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.17 E-value=4.2e-06 Score=69.97 Aligned_cols=100 Identities=7% Similarity=-0.029 Sum_probs=71.1
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcC--CCCCCCeEEecC--------CCChHHHHHHHHhcCCCCCCcEEEEecCccc
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLAT 218 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~g--l~~~f~~i~~~~--------~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~D 218 (268)
+..+++++++|+... ....++. ++ +...|+.+.++. ..+|+.+++.+++.++++++++++|||+.+|
T Consensus 143 ~~~~~ki~i~~~~~~--~~~~~~~-l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD 219 (271)
T 1rlm_A 143 DDVLFKFSLNLPDEQ--IPLVIDK-LHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGND 219 (271)
T ss_dssp CSCEEEEEEECCGGG--HHHHHHH-HHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred CCceEEEEEEcCHHH--HHHHHHH-HHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHH
Confidence 456788999887643 3444443 22 445566665542 1399999999999999999999999999999
Q ss_pred hhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 219 LKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 219 i~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
+.+ ++.+|+. +++.+ ...+++. .+++++.+..+
T Consensus 220 ~~m----~~~ag~~-va~~n---a~~~~k~---~a~~v~~~~~~ 252 (271)
T 1rlm_A 220 AEM----LKMARYS-FAMGN---AAENIKQ---IARYATDDNNH 252 (271)
T ss_dssp HHH----HHHCSEE-EECTT---CCHHHHH---HCSEECCCGGG
T ss_pred HHH----HHHcCCe-EEeCC---ccHHHHH---hCCeeCcCCCC
Confidence 999 9999984 44432 3345554 36688777654
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=4.8e-06 Score=71.70 Aligned_cols=79 Identities=11% Similarity=0.205 Sum_probs=58.2
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhc--CCCCCCCeEEecCC-------------------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELA--GVTIPPDRIYGLGT------------------------- 188 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~--gl~~~f~~i~~~~~------------------------- 188 (268)
.++|++.+++ +++|+.++|||.++...++..... . |....-+.|+++..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~-~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~ 221 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAAD-PRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPK 221 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTC-GGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhh-cccccCCCHHHeEeeeeeeecccccccccccccccccccccc
Confidence 5899999999 699999999999999999998876 3 33344566666420
Q ss_pred -----------------C-ChHHHHHHHHhcCCCCCCcEEEEecCc-cchhc
Q 024415 189 -----------------G-PKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKN 221 (268)
Q Consensus 189 -----------------~-pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~ 221 (268)
+ -|+..++..... +-.| ++.+|||. .|+.|
T Consensus 222 ~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-g~~P--i~a~Gns~dgD~~M 270 (327)
T 4as2_A 222 ANLDLEVTPYLWTPATWMAGKQAAILTYIDR-WKRP--ILVAGDTPDSDGYM 270 (327)
T ss_dssp GGTTCEEEEEECSSCSSTHHHHHHHHHHTCS-SCCC--SEEEESCHHHHHHH
T ss_pred ccccccccccccccccccCccHHHHHHHHhh-CCCC--eEEecCCCCCCHHH
Confidence 1 267777776632 4444 49999994 78887
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.10 E-value=8.7e-06 Score=77.50 Aligned_cols=109 Identities=20% Similarity=0.148 Sum_probs=82.6
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
.++.|++.+.+ +++|++++++|+.+...+....+. +|+. .+++.-. ..|.+.++.+... ++++|||
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~-lgi~----~~~~~~~P~~K~~~v~~l~~~-----~~v~~vG 603 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-----EVVAFVG 603 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCTTCHHHHHHHHTTT-----CCEEEEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCc----EEEccCCHHHHHHHHHHHhcC-----CeEEEEE
Confidence 37889999999 699999999999999999999999 7985 3333322 3789999999876 6779999
Q ss_pred cCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhc
Q 024415 214 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 267 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l 267 (268)
|+.+|+.+ .+.||+ ++..|.++ +..+ ..+|+++ +++..+.+.+
T Consensus 604 Dg~ND~~a----l~~A~v---giamg~g~-~~a~---~~AD~vl~~~~~~~i~~~i 648 (723)
T 3j09_A 604 DGINDAPA----LAQADL---GIAVGSGS-DVAV---ESGDIVLIRDDLRDVVAAI 648 (723)
T ss_dssp CSSTTHHH----HHHSSE---EEECCCCS-CCSS---CCSSEECSSCCTTHHHHHH
T ss_pred CChhhHHH----HhhCCE---EEEeCCCc-HHHH---HhCCEEEeCCCHHHHHHHH
Confidence 99999999 999995 34444222 2222 3577888 6777766544
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=3.7e-05 Score=75.73 Aligned_cols=113 Identities=14% Similarity=0.101 Sum_probs=82.9
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC----e-----------------------EEecCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD----R-----------------------IYGLGT 188 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~----~-----------------------i~~~~~ 188 (268)
++.|++.+++ +++|+++.++|+.....+..+.+. +|+....+ . +++.-.
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~-lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-HTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 7899999999 799999999999999999999999 79965432 1 222212
Q ss_pred -CChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHh
Q 024415 189 -GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSR 265 (268)
Q Consensus 189 -~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~ 265 (268)
..|..+++.+.+. .+.++||||+.+|+.+ .+.|++. |++..| + +..++ .+|+++ +++..+..
T Consensus 682 P~~K~~~v~~l~~~----g~~v~~~GDG~ND~~a----lk~Advg-iamg~g--~-~~ak~---aAd~vl~~~~~~~i~~ 746 (995)
T 3ar4_A 682 PSHKSKIVEYLQSY----DEITAMTGDGVNDAPA----LKKAEIG-IAMGSG--T-AVAKT---ASEMVLADDNFSTIVA 746 (995)
T ss_dssp SSHHHHHHHHHHTT----TCCEEEEECSGGGHHH----HHHSTEE-EEETTS--C-HHHHH---TCSEEETTCCHHHHHH
T ss_pred HHHHHHHHHHHHHC----CCEEEEEcCCchhHHH----HHHCCeE-EEeCCC--C-HHHHH---hCCEEECCCCHHHHHH
Confidence 2567888888876 3677999999999999 9999973 334322 2 23333 467888 45777766
Q ss_pred hc
Q 024415 266 KL 267 (268)
Q Consensus 266 ~l 267 (268)
.+
T Consensus 747 ~i 748 (995)
T 3ar4_A 747 AV 748 (995)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.01 E-value=7.8e-06 Score=73.13 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=74.5
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhc--------CCCCCCCeEEecCCCCh-----------------
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELA--------GVTIPPDRIYGLGTGPK----------------- 191 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~--------gl~~~f~~i~~~~~~pk----------------- 191 (268)
..|.+...| +++|.++.++||++-.+++..+..++ ...++||.|++...||.
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~ 266 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT 266 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCC
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCc
Confidence 356677777 69999999999999999999998765 34578999998876554
Q ss_pred --------------HHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecC
Q 024415 192 --------------VEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 192 --------------~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
.--+..+.+..+....+|+||||+. .||..+ -+..||.+++|...
T Consensus 267 l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~---kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 267 MTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRL---KKDCNWRTALVVEE 326 (470)
T ss_dssp EEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHH---HHSCCCEEEEECTT
T ss_pred ccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhh---hhccCCeEEEEhHH
Confidence 0012445555677888999999995 798882 33689999999754
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.7e-05 Score=59.69 Aligned_cols=59 Identities=17% Similarity=0.176 Sum_probs=34.4
Q ss_pred HcCCCeEEEEcCCCH---HHHHHHHHHhcCCCCCCCeEEecCCCChHH-HHHHHHhcCCCCCCcEEEEecCc
Q 024415 149 KFASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLGTGPKVE-VLKQLQKKPELQGMTLHFVEDRL 216 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~---~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~-~~~~~~~~~~~~~~~~l~IGDs~ 216 (268)
+++|+.++++|+.+. ..+...++. .|+. ++.| ...+|... .....+.+++.. +||+|..
T Consensus 37 ~~~G~~iii~TgR~~~~~~~~~~~l~~-~gi~--~~~I--~~n~P~~~~~~~~~~rK~~~~----~fIDDR~ 99 (142)
T 2obb_A 37 QQEKHRLILWSVREGELLDEAIEWCRA-RGLE--FYAA--NKDYPEEERDHQGFSRKLKAD----LFIDDRN 99 (142)
T ss_dssp HHTTCEEEECCSCCHHHHHHHHHHHHT-TTCC--CSEE--SSSSTTC---CCSCCSSCCCS----EEECTTS
T ss_pred HHCCCEEEEEeCCCcccHHHHHHHHHH-cCCC--eEEE--EcCCchhhhcchhhcCCcCCC----EEeeccc
Confidence 689999999999874 344445666 5663 3433 22224322 112334455555 9999975
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.79 E-value=6.1e-05 Score=71.65 Aligned_cols=109 Identities=15% Similarity=0.167 Sum_probs=79.0
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC-CChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~-~pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
.++.|++.+.+ +++|++++++|+.....+..+.+. +|+.. +++.-. ..|.+.++.+..+. +.++|||
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~-lgi~~----v~a~~~P~~K~~~v~~l~~~g----~~V~~vG 623 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGT-LGIKK----VVAEIMPEDKSRIVSELKDKG----LIVAMAG 623 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHH-HTCCC----EECSCCHHHHHHHHHHHHHHS----CCEEEEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCE----EEEecCHHHHHHHHHHHHhcC----CEEEEEE
Confidence 46889999999 689999999999999999999999 79864 332222 25678888888763 4569999
Q ss_pred cCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhh
Q 024415 214 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 266 (268)
Q Consensus 214 Ds~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~ 266 (268)
|+.+|+.+ -+.||+ .|++.+| +. ..++ ..|+++ +++..+.+.
T Consensus 624 DG~ND~pa----L~~Adv-GIAmg~g--~d-~a~~---~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 624 DGVNDAPA----LAKADI-GIAMGTG--TD-VAIE---SAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp CSSTTHHH----HHHSSE-EEEESSS--CS-HHHH---HCSEEECSCCSTTHHHH
T ss_pred CChHhHHH----HHhCCE-EEEeCCc--cH-HHHH---hCCEEEccCCHHHHHHH
Confidence 99999999 899995 3344333 32 3333 256776 455555443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=61.54 Aligned_cols=38 Identities=26% Similarity=0.374 Sum_probs=30.1
Q ss_pred HcCCCeEEEEcC---CCHHHHHHHHHHhcCCC-CCCCeEEecC
Q 024415 149 KFASSRIYIVTT---KQSRFADALLRELAGVT-IPPDRIYGLG 187 (268)
Q Consensus 149 ~~~g~~i~ivTn---~~~~~~~~~l~~~~gl~-~~f~~i~~~~ 187 (268)
+++|++++++|| .+.......++. +|+. ..++.++++.
T Consensus 43 ~~~g~~~~~~Tn~~~r~~~~~~~~l~~-lg~~~~~~~~ii~~~ 84 (284)
T 2hx1_A 43 KAQGQDYYIVTNDASRSPEQLADSYHK-LGLFSITADKIISSG 84 (284)
T ss_dssp HHTTCEEEEEECCCSSCHHHHHHHHHH-TTCTTCCGGGEEEHH
T ss_pred HHCCCEEEEEeCCCCcCHHHHHHHHHH-CCcCCCCHhhEEcHH
Confidence 578999999998 566677788888 7987 7777777653
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00015 Score=60.94 Aligned_cols=62 Identities=19% Similarity=0.073 Sum_probs=51.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
+|..+++.+++.++++++++++|||+.+|+.+ ++.+|+ .|++.++ . .+++. .+++++.+..+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m----~~~ag~-~va~~~~--~-~~~~~---~a~~v~~~~~~ 277 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSM----LEAAGK-GVAMGNA--R-EDIKS---IADAVTLTNDE 277 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHH----HHHSSE-EEECTTC--C-HHHHH---HCSEECCCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHH----HHHcCc-EEEEcCC--C-HHHHh---hCceeecCCCc
Confidence 89999999999999999999999999999999 999998 6667543 2 45554 26688777654
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00054 Score=67.71 Aligned_cols=113 Identities=15% Similarity=0.171 Sum_probs=77.9
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC------------------------Ce---------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP------------------------DR--------- 182 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f------------------------~~--------- 182 (268)
++.|++.+.+ +++|+++.++|+.....+..+.+. +|+...- ..
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHH-cCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 7889999999 699999999999999999999999 7986320 00
Q ss_pred ---------------EEecCCC--ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHH
Q 024415 183 ---------------IYGLGTG--PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 245 (268)
Q Consensus 183 ---------------i~~~~~~--pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~ 245 (268)
++.+... .|..+++.+.+.- +.++||||+.+|+.+ -+.|++.. ++ |.+..+.
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g----~~V~~iGDG~ND~pa----Lk~AdvGI-Am--g~~gtd~ 746 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG----AIVAVTGDGVNDSPA----LKKADIGV-AM--GISGSDV 746 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTT----CCEEEEECSGGGHHH----HHHSSEEE-EE--SSSCCHH
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC----CEEEEEcCCcchHHH----HHhCCceE-Ee--CCccCHH
Confidence 1222222 3566777777653 456999999999999 89999733 33 3222233
Q ss_pred HHhhcCCCCEEEcC--HhHHHhh
Q 024415 246 REEAASIPRIQLLQ--LSDFSRK 266 (268)
Q Consensus 246 ~~~~~~~p~~~~~~--~~~l~~~ 266 (268)
.++ .+|+++.+ +..+.+.
T Consensus 747 ak~---aAD~Vl~~~~~~~I~~~ 766 (1028)
T 2zxe_A 747 SKQ---AADMILLDDNFASIVTG 766 (1028)
T ss_dssp HHH---HCSEEETTCCTHHHHHH
T ss_pred HHH---hcCEEecCCCHHHHHHH
Confidence 443 25677754 5555544
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00045 Score=57.85 Aligned_cols=56 Identities=13% Similarity=0.019 Sum_probs=39.4
Q ss_pred HHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhH
Q 024415 196 KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 262 (268)
Q Consensus 196 ~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~ 262 (268)
+.+++.++++++++++|||+.+|+.+ ++.+|+ .|++.++ ...++. .+++++.+..+
T Consensus 204 ~~l~~~~~~~~~~~~~~GD~~nD~~m----~~~ag~-~va~~n~---~~~~~~---~a~~v~~~~~~ 259 (282)
T 1rkq_A 204 KSLADVLGIKPEEIMAIGDQENDIAM----IEYAGV-GVAVDNA---IPSVKE---VANFVTKSNLE 259 (282)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHH----HHHSSE-EEECTTS---CHHHHH---HCSEECCCTTT
T ss_pred HHHHHHhCCCHHHEEEECCcHHHHHH----HHHCCc-EEEecCC---cHHHHh---hCCEEecCCCc
Confidence 44444557788999999999999999 999998 4555432 235554 26688777543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00022 Score=61.90 Aligned_cols=39 Identities=15% Similarity=0.163 Sum_probs=28.1
Q ss_pred HcCCCeEEEEcCCC---HHHHHHHH-HHhcCCCCCCCeEEecCC
Q 024415 149 KFASSRIYIVTTKQ---SRFADALL-RELAGVTIPPDRIYGLGT 188 (268)
Q Consensus 149 ~~~g~~i~ivTn~~---~~~~~~~l-~~~~gl~~~f~~i~~~~~ 188 (268)
++.|++++++||++ .......+ +. +|+....+.|+++..
T Consensus 42 ~~~g~~~~~vTNn~~~~~~~~~~~l~~~-lgi~~~~~~i~ts~~ 84 (352)
T 3kc2_A 42 NRNKIPYILLTNGGGFSERARTEFISSK-LDVDVSPLQIIQSHT 84 (352)
T ss_dssp HHTTCCEEEECSCCSSCHHHHHHHHHHH-HTSCCCGGGEECTTG
T ss_pred HHCCCEEEEEeCCCCCCchHHHHHHHHh-cCCCCChhhEeehHH
Confidence 68899999999985 23333344 46 699877788887753
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00059 Score=57.25 Aligned_cols=17 Identities=41% Similarity=0.583 Sum_probs=15.1
Q ss_pred CCceeEeecCccccCch
Q 024415 1 MADLYALDFDGVLCDSC 17 (268)
Q Consensus 1 M~~~viFD~DGTL~d~~ 17 (268)
|+|+|+||+||||+|+.
T Consensus 3 mikli~~DlDGTLl~~~ 19 (288)
T 1nrw_A 3 AMKLIAIDLDGTLLNSK 19 (288)
T ss_dssp -CCEEEEECCCCCSCTT
T ss_pred ceEEEEEeCCCCCCCCC
Confidence 78999999999999977
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00022 Score=59.78 Aligned_cols=48 Identities=10% Similarity=0.135 Sum_probs=28.2
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhc
Q 024415 164 RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 164 ~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~ 221 (268)
..+..+++. +|+. .-+.++-+|+..+.++++.... . +.+|+....+..
T Consensus 201 ~~l~~l~~~-~~~~-~~~~~~~GD~~nD~~m~~~ag~----~----va~~n~~~~~~~ 248 (282)
T 1rkq_A 201 TGVKSLADV-LGIK-PEEIMAIGDQENDIAMIEYAGV----G----VAVDNAIPSVKE 248 (282)
T ss_dssp HHHHHHHHH-HTCC-GGGEEEEECSGGGHHHHHHSSE----E----EECTTSCHHHHH
T ss_pred HHHHHHHHH-hCCC-HHHEEEECCcHHHHHHHHHCCc----E----EEecCCcHHHHh
Confidence 345666666 5764 2345555566677888776542 3 677776544443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00069 Score=65.90 Aligned_cols=111 Identities=13% Similarity=0.038 Sum_probs=78.3
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC-C------------------------eEEecCC-C
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP-D------------------------RIYGLGT-G 189 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f-~------------------------~i~~~~~-~ 189 (268)
++.|++.+.+ ++.|+++.++|+.....+..+.+. +|+.... + .+++.-. .
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~-lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ-LGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH-HTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHH-cCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 7889999999 799999999999999999999999 7995311 0 1222222 2
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSR 265 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~ 265 (268)
.|..+++.+.+.- +.+.|+||+.+|..+ -+.|++ .|++..| + +..++ ..|+++. ++..+..
T Consensus 614 ~K~~iV~~Lq~~g----~~Vam~GDGvNDapa----Lk~Adv-GIAmg~g--t-d~ak~---aADiVl~~~~~~~I~~ 676 (920)
T 1mhs_A 614 HKYNVVEILQQRG----YLVAMTGDGVNDAPS----LKKADT-GIAVEGS--S-DAARS---AADIVFLAPGLGAIID 676 (920)
T ss_dssp HHHHHHHHHHTTT----CCCEECCCCGGGHHH----HHHSSE-EEEETTS--C-HHHHH---SSSEEESSCCSHHHHH
T ss_pred HHHHHHHHHHhCC----CeEEEEcCCcccHHH----HHhCCc-Ccccccc--c-HHHHH---hcCeEEcCCCHHHHHH
Confidence 4688888888763 456999999999999 888987 3344332 3 33333 3667763 4554444
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00022 Score=56.94 Aligned_cols=91 Identities=10% Similarity=-0.067 Sum_probs=66.9
Q ss_pred CCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCC-CCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~-~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
...||+.++|+ ++++.++|.|++...+++.+++. ++.. .+|+..+..+.. .....+-+-+...+..+++||+|+|
T Consensus 59 ~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~-LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDD 137 (204)
T 3qle_A 59 AKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEK-LDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDT 137 (204)
T ss_dssp EECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-TSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEES
T ss_pred EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEEC
Confidence 47899999993 78899999999999999999999 7876 478876665542 1111122223345778899999999
Q ss_pred CccchhcccccccccCCeEE
Q 024415 215 RLATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v 234 (268)
++..... ....|+...
T Consensus 138 sp~~~~~----~p~N~I~I~ 153 (204)
T 3qle_A 138 DPNSYKL----QPENAIPME 153 (204)
T ss_dssp CTTTTTT----CGGGEEECC
T ss_pred CHHHHhh----CccCceEee
Confidence 9988877 556666443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0019 Score=63.89 Aligned_cols=107 Identities=15% Similarity=0.170 Sum_probs=71.5
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC------------------------e--------
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPD------------------------R-------- 182 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~------------------------~-------- 182 (268)
.++.|++.+.+ +++|+++.++|+.+...+....+. .|+...-. .
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~-lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS-VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 37889999999 699999999999999999999998 78842110 0
Q ss_pred -----------------EEecCCC-ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHH
Q 024415 183 -----------------IYGLGTG-PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 244 (268)
Q Consensus 183 -----------------i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~ 244 (268)
+++.... .|..+++.+.... +.++++||+.+|+.| -+.||+ .|++ |-+..+
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g----~~V~a~GDG~ND~~m----Lk~A~v-GIAM--g~ng~d 750 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLG----AIVAVTGDGVNDSPA----LKKADI-GVAM--GIAGSD 750 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcC----CEEEEECCcHHhHHH----HHHCCe-eEEe--CCccCH
Confidence 1111111 2345555555442 346999999999999 899997 3333 422333
Q ss_pred HHHhhcCCCCEEEcC
Q 024415 245 EREEAASIPRIQLLQ 259 (268)
Q Consensus 245 ~~~~~~~~p~~~~~~ 259 (268)
..++ ..|+++.+
T Consensus 751 ~aK~---aAD~Vl~~ 762 (1034)
T 3ixz_A 751 AAKN---AADMILLD 762 (1034)
T ss_pred HHHH---hcCEEecc
Confidence 4444 35676654
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00048 Score=56.46 Aligned_cols=65 Identities=12% Similarity=-0.070 Sum_probs=49.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhc----CCCCEEEcCHhH
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAA----SIPRIQLLQLSD 262 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~----~~p~~~~~~~~~ 262 (268)
+|+.+++.+++.+++.++++++|||+.+|+.+ ++.+|+ .|++ | +..+++++.. ..++++..+..+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m----~~~~g~-~va~--~-na~~~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGL----FETSAR-GVIV--R-NAQPELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH----HTSSSE-EEEC--T-TCCHHHHHHHHHHCCTTEEECSSCHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHH----HhccCc-EEEE--c-CCcHHHHHHHhcccccceeecCCcch
Confidence 89999999999999999999999999999999 998887 4555 4 3334555531 024577666543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0012 Score=55.79 Aligned_cols=61 Identities=11% Similarity=0.011 Sum_probs=48.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc-CHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL-QLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~-~~~ 261 (268)
+|+.+++.+++.++++++++++|||+.+|+.+ ++.+|+. |++.++ . ..++. .+++++. +..
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m----~~~ag~~-va~~na--~-~~~k~---~a~~v~~~~~~ 285 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAM----LSNFKYS-FAVANA--T-DSAKS---HAKCVLPVSHR 285 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH----HHSCSEE-EECTTC--C-HHHHH---HSSEECSSCTT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHH----HHHcCCe-EEEcCC--c-HHHHh---hCCEEEccCCC
Confidence 89999999999999999999999999999999 9999984 555443 2 34544 3567776 543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00036 Score=57.56 Aligned_cols=46 Identities=13% Similarity=-0.104 Sum_probs=40.8
Q ss_pred CChHHHHHHHHhcCCCCC--CcEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 189 GPKVEVLKQLQKKPELQG--MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~--~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
.+|+.+++.+++.+++++ +++++|||+.+|+.+ ++.+|+. |++.++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m----~~~ag~~-va~~na 222 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPL----FRAVDLA-VYVGRG 222 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHH----HHTSSEE-EECSSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHH----HHhCCCe-EEeCCh
Confidence 588999999999999998 999999999999999 9999974 555543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0017 Score=54.89 Aligned_cols=28 Identities=7% Similarity=-0.104 Sum_probs=23.6
Q ss_pred HcCCCeEEEEcCCCHHHHHHHH--HHhcC-CC
Q 024415 149 KFASSRIYIVTTKQSRFADALL--RELAG-VT 177 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l--~~~~g-l~ 177 (268)
+++|++++++|+++...+...+ +. ++ +.
T Consensus 58 ~~~Gi~v~iaTGR~~~~~~~~~~~~~-l~~~~ 88 (301)
T 2b30_A 58 IEKGYMVSICTGRSKVGILSAFGEEN-LKKMN 88 (301)
T ss_dssp HHHTCEEEEECSSCHHHHHHHHCHHH-HHHHT
T ss_pred HHCCCEEEEEcCCCHHHHHHHhhHHh-hcccc
Confidence 4679999999999998888888 87 57 65
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00035 Score=58.36 Aligned_cols=53 Identities=9% Similarity=-0.104 Sum_probs=41.6
Q ss_pred ChHHHHHHHHhcCC-CCCCc--EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHH
Q 024415 190 PKVEVLKQLQKKPE-LQGMT--LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 247 (268)
Q Consensus 190 pk~~~~~~~~~~~~-~~~~~--~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~ 247 (268)
+|..+++.+++.++ +.+++ +++|||+.+|+.+ .+.+|+ .|++.++.....+++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m----~~~ag~-~va~~n~~~~~~~~~ 244 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPL----LEVMDY-AVIVKGLNREGVHLH 244 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHH----HHTSSE-EEECCCCC-------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHH----HHhCCc-eEEecCCCccchhhc
Confidence 89999999999999 89999 9999999999999 999998 477776653333443
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0014 Score=63.50 Aligned_cols=84 Identities=12% Similarity=0.058 Sum_probs=64.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC---Ce-----------------------EEecCC-
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP---DR-----------------------IYGLGT- 188 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f---~~-----------------------i~~~~~- 188 (268)
++.|++.+.+ ++.|+++.++|+.....+..+.+. +|+.... .. +++.-.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~-lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT-TTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH-hCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 6889999999 799999999999999999999999 7985310 00 122211
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCC
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~ 231 (268)
..|..+++.+.++- +.+.|+||+.+|..+ -+.|++
T Consensus 567 ~~K~~iV~~lq~~g----~~Vam~GDGvNDapa----Lk~Adv 601 (885)
T 3b8c_A 567 EHKYEIVKKLQERK----HIVGMTGDGVNDAPA----LKKADI 601 (885)
T ss_dssp HHHHHHHHHHHHTT----CCCCBCCCSSTTHHH----HHHSSS
T ss_pred HHHHHHHHHHHHCC----CeEEEEcCCchhHHH----HHhCCE
Confidence 14677888888763 456999999999999 888887
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0047 Score=51.38 Aligned_cols=29 Identities=17% Similarity=0.118 Sum_probs=25.1
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCC
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTI 178 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~ 178 (268)
+++|++++++|+++...+...++. +++..
T Consensus 39 ~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~ 67 (275)
T 1xvi_A 39 REANVPVILCSSKTSAEMLYLQKT-LGLQG 67 (275)
T ss_dssp HHTTCCEEEECSSCHHHHHHHHHH-TTCTT
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHH-cCCCC
Confidence 578999999999999999999988 68754
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.004 Score=53.18 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=59.5
Q ss_pred CCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC--Ce--EEecCC---------CC-hHHHHHHH-HhcC
Q 024415 140 FYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPP--DR--IYGLGT---------GP-KVEVLKQL-QKKP 202 (268)
Q Consensus 140 ~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f--~~--i~~~~~---------~p-k~~~~~~~-~~~~ 202 (268)
.+||+.+||+ +..|.++|.|.+...++..+++. ++....+ .. +...+. |. .-.-+..+ ..-+
T Consensus 165 ~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~-Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL-LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHH-TTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH-hCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 5688999993 67799999999999999999999 6765443 21 111111 10 11122222 1124
Q ss_pred CCCCCcEEEEecCccchhcccccccccCCeE
Q 024415 203 ELQGMTLHFVEDRLATLKNVIKEPELDGWNL 233 (268)
Q Consensus 203 ~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~ 233 (268)
+..++++|+|+|++.-... ....|+..
T Consensus 244 ~rdl~~tIiIDdsp~~~~~----~p~NgI~I 270 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLM----NPKSGLKI 270 (320)
T ss_dssp TCCGGGEEEEESCGGGGTT----SGGGEEEC
T ss_pred CCChhHEEEEeCChHHhcc----CcCceEEe
Confidence 6788999999999988777 66666543
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0057 Score=53.30 Aligned_cols=84 Identities=15% Similarity=0.121 Sum_probs=61.8
Q ss_pred ccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCC-CCC-eEEecCCCChHHHHHHHHhcCCCCCCcEEE
Q 024415 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPD-RIYGLGTGPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 136 ~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~-~f~-~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
..+.++||+.++|+ +++|.++|.|++...++..+++. ++... +|+ .+++.+..+.. -++.+..-++..+++||+
T Consensus 72 ~~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~-LDp~~~~f~~ri~sr~~~g~~-~~KdL~~L~~~dl~~vii 149 (372)
T 3ef0_A 72 YYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGSL-AQKSLRRLFPCDTSMVVV 149 (372)
T ss_dssp EEEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HCTTSCSSSSCEECTTTSSCS-SCCCGGGTCSSCCTTEEE
T ss_pred EEEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHH-hccCCceeeeEEEEecCCCCc-ceecHHHhcCCCCceEEE
Confidence 34578999999992 78899999999999999999999 68876 787 67766553220 012222224778899999
Q ss_pred EecCccchhc
Q 024415 212 VEDRLATLKN 221 (268)
Q Consensus 212 IGDs~~Di~~ 221 (268)
|+|++.-...
T Consensus 150 iDd~~~~~~~ 159 (372)
T 3ef0_A 150 IDDRGDVWDW 159 (372)
T ss_dssp EESCSGGGTT
T ss_pred EeCCHHHcCC
Confidence 9999854433
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0023 Score=46.83 Aligned_cols=16 Identities=25% Similarity=0.426 Sum_probs=14.2
Q ss_pred CceeEeecCccccCch
Q 024415 2 ADLYALDFDGVLCDSC 17 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~ 17 (268)
+|+|+||+||||+++.
T Consensus 1 ik~i~~DlDGTL~~~~ 16 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQAN 16 (126)
T ss_dssp CCEEEECSTTTTBCCC
T ss_pred CCEEEEecCCCCCCCC
Confidence 4789999999999866
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=95.50 E-value=0.085 Score=42.82 Aligned_cols=83 Identities=13% Similarity=0.032 Sum_probs=63.5
Q ss_pred cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCC--eEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccc
Q 024415 150 FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 150 ~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~--~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~ 227 (268)
+.+..-++||+..--.....+-- +|+..+|. .|+++-.-.|...|+++..++| ....-++|||+..--++ |+
T Consensus 174 r~~~vNVLVTs~qLVPaLaK~LL-ygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eEe~A----Ak 247 (274)
T 3geb_A 174 RPNCVNVLVTTTQLIPALAKVLL-YGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEEEQG----AK 247 (274)
T ss_dssp STTEEEEEEESSCHHHHHHHHHH-TTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHHHHH----HH
T ss_pred CCceeEEEEecCchHHHHHHHHH-hhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHHHHH----HH
Confidence 45556677887765444444444 68887775 5888766589999999999997 44777899999999999 99
Q ss_pred ccCCeEEEeec
Q 024415 228 LDGWNLYLGDW 238 (268)
Q Consensus 228 ~aG~~~v~v~~ 238 (268)
..+++++-|..
T Consensus 248 ~~n~PFwrI~~ 258 (274)
T 3geb_A 248 KHNMPFWRISC 258 (274)
T ss_dssp HTTCCEEECCS
T ss_pred HcCCCeEEeec
Confidence 99999988753
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.0054 Score=50.77 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=15.2
Q ss_pred CCceeEeecCccccCch
Q 024415 1 MADLYALDFDGVLCDSC 17 (268)
Q Consensus 1 M~~~viFD~DGTL~d~~ 17 (268)
|+|+|+||+||||+++.
T Consensus 2 ~~kli~~DlDGTLl~~~ 18 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLNDA 18 (271)
T ss_dssp CCCEEEECCCCCCSCTT
T ss_pred CccEEEEeCCCCCCCCC
Confidence 37999999999999876
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.007 Score=49.57 Aligned_cols=40 Identities=13% Similarity=-0.076 Sum_probs=34.2
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecC----ccchhcccccccccCCeEEEee
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDR----LATLKNVIKEPELDGWNLYLGD 237 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs----~~Di~~~~~~A~~aG~~~v~v~ 237 (268)
.|..+++.+++ ++++++.|||+ .+|+.+ -+.+|...+.|.
T Consensus 187 ~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~M----l~~a~~~g~~v~ 230 (246)
T 3f9r_A 187 DKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEI----YTDKRTIGHKVT 230 (246)
T ss_dssp SGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHH----HTCTTSEEEECS
T ss_pred CHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHH----HhCCCccEEEeC
Confidence 78999999888 88999999995 999999 888886666664
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.021 Score=46.94 Aligned_cols=49 Identities=14% Similarity=-0.105 Sum_probs=40.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEec----CccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGD----s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
.|..+++.+ +++++++++.||| +.+|+.+ -+.+|...+++. |..+.++.
T Consensus 197 sKg~al~~l---~gi~~~~viafGDs~~~~~NDi~M----l~~~~~~g~av~---NA~~~~k~ 249 (262)
T 2fue_A 197 DKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEI----FADPRTVGHSVV---SPQDTVQR 249 (262)
T ss_dssp STTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHH----HHSTTSEEEECS---SHHHHHHH
T ss_pred CHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHH----HhcCccCcEEec---CCCHHHHH
Confidence 789999999 7899999999999 9999999 898887777773 44455554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=93.90 E-value=0.017 Score=47.29 Aligned_cols=46 Identities=9% Similarity=-0.099 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCCCC-CCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCcc
Q 024415 163 SRFADALLRELAGVTI-PPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLA 217 (268)
Q Consensus 163 ~~~~~~~l~~~~gl~~-~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~ 217 (268)
...++.+++. +|+.. .-+.++-+|+..+.++++... .. +.+|+...
T Consensus 178 ~~~l~~l~~~-~~i~~~~~~~~~~GD~~nD~~m~~~ag----~~----va~~na~~ 224 (259)
T 3zx4_A 178 GRAVARLRAL-WPDPEEARFAVGLGDSLNDLPLFRAVD----LA----VYVGRGDP 224 (259)
T ss_dssp HHHHHHHHHT-CSSHHHHTSEEEEESSGGGHHHHHTSS----EE----EECSSSCC
T ss_pred HHHHHHHHHH-hCCCCCCceEEEEeCCHHHHHHHHhCC----Ce----EEeCChhh
Confidence 3456666777 67742 145566667667888887654 33 67776654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=93.63 E-value=0.029 Score=45.59 Aligned_cols=49 Identities=14% Similarity=-0.069 Sum_probs=37.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEec----CccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGD----s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
.|..+++.+ +++++++++.||| +.+|+.+ -+.+|...+++. |..+++++
T Consensus 188 ~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~M----l~~a~~ag~av~---Na~~~vk~ 240 (246)
T 2amy_A 188 DKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEI----FTDPRTMGYSVT---APEDTRRI 240 (246)
T ss_dssp SGGGGGGGT---TTSCCSEEEEEECSCC---CCCHH----HHCTTEEEEECS---SHHHHHHH
T ss_pred chHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHH----HHhCCcceEEee---CCCHHHHH
Confidence 788899888 7999999999999 9999999 888887666664 33345544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=93.28 E-value=0.085 Score=43.25 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=14.3
Q ss_pred CceeEeecCccccCch
Q 024415 2 ADLYALDFDGVLCDSC 17 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~ 17 (268)
.|+|+||+||||++..
T Consensus 13 ~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 13 RVLCLFDVDGTLTPAR 28 (262)
T ss_dssp CEEEEEESBTTTBSTT
T ss_pred eEEEEEeCccCCCCCC
Confidence 5799999999999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=93.06 E-value=0.14 Score=41.43 Aligned_cols=50 Identities=10% Similarity=0.065 Sum_probs=39.4
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccccc--CCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD--GWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~a--G~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
.|..+++.+++.++ +++|||+.+|+.+ -+.+ |. .|++.++ + ..+++++.+
T Consensus 160 ~Kg~al~~l~~~~g-----via~GD~~ND~~M----l~~a~~g~-~vam~Na-------~---~~A~~v~~~ 211 (239)
T 1u02_A 160 NKGSAIRSVRGERP-----AIIAGDDATDEAA----FEANDDAL-TIKVGEG-------E---THAKFHVAD 211 (239)
T ss_dssp CHHHHHHHHHTTSC-----EEEEESSHHHHHH----HHTTTTSE-EEEESSS-------C---CCCSEEESS
T ss_pred CHHHHHHHHHhhCC-----eEEEeCCCccHHH----HHHhhCCc-EEEECCC-------C---CcceEEeCC
Confidence 78999999999988 7999999999999 8888 75 4555443 1 245677777
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=92.62 E-value=0.11 Score=46.02 Aligned_cols=79 Identities=15% Similarity=0.121 Sum_probs=57.8
Q ss_pred cCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCC-CCCe-EEecCCCChHHHHHHHHhcCCCCCCcEEEE
Q 024415 137 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDR-IYGLGTGPKVEVLKQLQKKPELQGMTLHFV 212 (268)
Q Consensus 137 ~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~-~f~~-i~~~~~~pk~~~~~~~~~~~~~~~~~~l~I 212 (268)
.+..+||+.++|+ +..|.++|.|.+...++..+++. ++-.. +|.. +++.+.... ..++-+..-++.....+|+|
T Consensus 81 ~V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~-LDp~~~~f~~Rl~sRd~cg~-~~~KdL~~ll~rdl~~vvII 158 (442)
T 3ef1_A 81 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKI-IDPTGKLFQDRVLSRDDSGS-LAQKSLRRLFPCDTSMVVVI 158 (442)
T ss_dssp EEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHH-HCTTSTTTTTCEECTTTSSC-SSCCCGGGTCSSCCTTEEEE
T ss_pred EEEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hccCCccccceEEEecCCCC-ceeeehHHhcCCCcceEEEE
Confidence 4568899999993 78899999999999999999999 67765 6765 666654311 01122222246677889999
Q ss_pred ecCcc
Q 024415 213 EDRLA 217 (268)
Q Consensus 213 GDs~~ 217 (268)
+|++.
T Consensus 159 Dd~p~ 163 (442)
T 3ef1_A 159 DDRGD 163 (442)
T ss_dssp ESCSG
T ss_pred ECCHH
Confidence 99974
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=92.36 E-value=0.044 Score=44.50 Aligned_cols=48 Identities=10% Similarity=0.157 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhc
Q 024415 164 RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 164 ~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~ 221 (268)
..+..+++. +|+. .-+.++-+|+..+.++++.. +.. +.+|+....+..
T Consensus 165 ~~l~~l~~~-~~~~-~~~~~~~GD~~nD~~m~~~~----g~~----va~~na~~~~k~ 212 (244)
T 1s2o_A 165 NATQYLQQH-LAME-PSQTLVCGDSGNDIGLFETS----ARG----VIVRNAQPELLH 212 (244)
T ss_dssp HHHHHHHHH-TTCC-GGGEEEEECSGGGHHHHTSS----SEE----EECTTCCHHHHH
T ss_pred HHHHHHHHH-hCCC-HHHEEEECCchhhHHHHhcc----CcE----EEEcCCcHHHHH
Confidence 355666777 6874 23455556666778777733 333 677876555554
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=92.04 E-value=0.049 Score=44.10 Aligned_cols=14 Identities=43% Similarity=0.695 Sum_probs=12.3
Q ss_pred CceeEeecCccccC
Q 024415 2 ADLYALDFDGVLCD 15 (268)
Q Consensus 2 ~~~viFD~DGTL~d 15 (268)
+++|+||+||||++
T Consensus 1 ikli~~DlDGTLl~ 14 (239)
T 1u02_A 1 MSLIFLDYDGTLVP 14 (239)
T ss_dssp -CEEEEECBTTTBC
T ss_pred CeEEEEecCCCCcC
Confidence 47899999999997
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=91.58 E-value=0.064 Score=43.44 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=14.2
Q ss_pred CceeEeecCccccCch
Q 024415 2 ADLYALDFDGVLCDSC 17 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~ 17 (268)
.|+|+||+||||++..
T Consensus 6 ~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 6 PALCLFDVDGTLTAPR 21 (246)
T ss_dssp SEEEEEESBTTTBCTT
T ss_pred ceEEEEECCCCcCCCC
Confidence 4799999999999876
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=85.24 E-value=0.38 Score=37.79 Aligned_cols=79 Identities=10% Similarity=0.121 Sum_probs=48.1
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEecCccchhccccccc
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~ 227 (268)
++.+-++++++......--..+..++|++ +.. +.-.+. --...++++.. .|.. ++|||+.. ... |+
T Consensus 91 ~~~~~kIavvg~~~~~~~~~~~~~ll~~~--i~~-~~~~~~~e~~~~i~~l~~-~G~~----vvVG~~~~-~~~----A~ 157 (196)
T 2q5c_A 91 KRFGNELALIAYKHSIVDKHEIEAMLGVK--IKE-FLFSSEDEITTLISKVKT-ENIK----IVVSGKTV-TDE----AI 157 (196)
T ss_dssp GGGCSEEEEEEESSCSSCHHHHHHHHTCE--EEE-EEECSGGGHHHHHHHHHH-TTCC----EEEECHHH-HHH----HH
T ss_pred HhhCCcEEEEeCcchhhHHHHHHHHhCCc--eEE-EEeCCHHHHHHHHHHHHH-CCCe----EEECCHHH-HHH----HH
Confidence 45566889888544332223333335653 221 121221 12446666665 4888 99999865 566 89
Q ss_pred ccCCeEEEeecCC
Q 024415 228 LDGWNLYLGDWGY 240 (268)
Q Consensus 228 ~aG~~~v~v~~g~ 240 (268)
+.|++++.+.+|.
T Consensus 158 ~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 158 KQGLYGETINSGE 170 (196)
T ss_dssp HTTCEEEECCCCH
T ss_pred HcCCcEEEEecCH
Confidence 9999999998764
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=84.35 E-value=0.48 Score=41.33 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=16.4
Q ss_pred CceeEeecCccccCchhhhHHHH
Q 024415 2 ADLYALDFDGVLCDSCGESSLSA 24 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~~~~~~~a 24 (268)
+|.|+||+|||+++-+ .+|..+
T Consensus 1 ~~~~~fdvdgv~~~~~-~~~d~~ 22 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEE-RCFDVS 22 (384)
T ss_dssp CCEEEECSBTTTBCSH-HHHHHH
T ss_pred CceEEEecCceeechh-hhccHH
Confidence 4789999999999766 344333
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=84.14 E-value=2.2 Score=34.83 Aligned_cols=88 Identities=14% Similarity=0.170 Sum_probs=64.2
Q ss_pred CCCCChHHHH------HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEe------cCCC-ChHHHHHHHHhcCCCC
Q 024415 139 RFYPGIPDAL------KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG------LGTG-PKVEVLKQLQKKPELQ 205 (268)
Q Consensus 139 ~~~pg~~e~L------~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~------~~~~-pk~~~~~~~~~~~~~~ 205 (268)
.++|+..+++ .+.|+.+..+++.+....+...+ +|-. .+.. +..+ .+++.++.+.+..+++
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~--~G~~----aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP 189 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAE--IGCI----AVMPLAGLIGSGLGICNPYNLRIILEEAKVP 189 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHH--SCCS----EEEECSSSTTCCCCCSCHHHHHHHHHHCSSC
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--hCCC----EEEeCCccCCCCCCcCCHHHHHHHHhcCCCC
Confidence 5679999988 37799999767666655555444 4642 2222 2123 5799999999988888
Q ss_pred CCcEEEEe---cCccchhcccccccccCCeEEEeecCC
Q 024415 206 GMTLHFVE---DRLATLKNVIKEPELDGWNLYLGDWGY 240 (268)
Q Consensus 206 ~~~~l~IG---Ds~~Di~~~~~~A~~aG~~~v~v~~g~ 240 (268)
++++ .++.|+.. |...|+..|.|.++.
T Consensus 190 ----VI~eGGI~TPsDAa~----AmeLGAdgVlVgSAI 219 (265)
T 1wv2_A 190 ----VLVDAGVGTASDAAI----AMELGCEAVLMNTAI 219 (265)
T ss_dssp ----BEEESCCCSHHHHHH----HHHHTCSEEEESHHH
T ss_pred ----EEEeCCCCCHHHHHH----HHHcCCCEEEEChHH
Confidence 7887 44679999 999999999998864
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=82.87 E-value=0.42 Score=38.76 Aligned_cols=16 Identities=31% Similarity=0.385 Sum_probs=14.9
Q ss_pred CceeEeecCccccCch
Q 024415 2 ADLYALDFDGVLCDSC 17 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~ 17 (268)
+|+|+||+||||+++.
T Consensus 4 ~kli~~DlDGTLl~~~ 19 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR 19 (246)
T ss_dssp SEEEEECSBTTTBSTT
T ss_pred ceEEEEeCcCCcCCCC
Confidence 7899999999999877
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 268 | |||
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.97 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.96 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.96 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.96 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.95 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.94 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.93 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.93 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.92 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.91 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.91 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.87 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.85 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.84 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.81 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.79 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.78 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.77 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.76 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.75 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.75 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.74 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.71 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.66 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.61 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.6 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.59 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.49 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.34 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.04 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.03 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.9 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.86 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.85 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.83 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.72 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.72 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.66 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.6 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.58 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.51 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.44 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.29 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.15 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.11 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.91 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.91 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.07 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 96.5 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.33 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.27 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.82 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 94.83 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 94.62 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.47 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 93.34 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 92.65 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 91.74 | |
| d1xm3a_ | 251 | Thiazole biosynthesis protein ThiG {Bacillus subti | 90.53 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 90.14 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 88.51 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 87.55 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 82.68 |
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=3.4e-31 Score=213.86 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=116.0
Q ss_pred hccCCCCCChHHHH--HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--CChHHHHHHHHhcCCCCCCcEE
Q 024415 135 IGANRFYPGIPDAL--KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 135 ~~~~~~~pg~~e~L--~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--~pk~~~~~~~~~~~~~~~~~~l 210 (268)
....+++||+.++| -+.+++++++||++...++..+++ +|+..+|+.+++++. +|+|+++..+.++++++|++++
T Consensus 80 ~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~-~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v 158 (210)
T d2ah5a1 80 IYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKN-LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAI 158 (210)
T ss_dssp GGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHH-TTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEE
T ss_pred hhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHh-hcccccccccccccccccccccccchhhhhhhcccccce
Confidence 45678999999999 255679999999999999999999 899999999998865 3999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
||||+.+|+.+ |+++|+++|+|.+|++..+++.. ..|++++.++.||...||
T Consensus 159 ~VGDs~~Di~a----a~~aGi~~i~v~~g~~~~~~l~~--~~pd~vi~~l~el~~~le 210 (210)
T d2ah5a1 159 IIGDTKFDMLG----ARETGIQKLAITWGFGEQADLLN--YQPDYIAHKPLEVLAYFQ 210 (210)
T ss_dssp EEESSHHHHHH----HHHHTCEEEEESSSSSCHHHHHT--TCCSEEESSTTHHHHHTC
T ss_pred eecCCHHHHHH----HHHcCCeEEEEcCCCCCHHHHHh--CCCCEEECCHHHHHHHhC
Confidence 99999999999 99999999999999988888876 579999999999999886
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.96 E-value=1.4e-30 Score=211.68 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=116.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
.....++||+.++| +++|++++++||+++..++..++. +|+..+|+.+++++. +|+|+++..+..+.+++|+
T Consensus 91 ~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~ 169 (224)
T d2hsza1 91 CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTA-FGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPK 169 (224)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGG
T ss_pred ccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHh-cCchhhccccccccccccccccchhhHHHHHHhhhhhh
Confidence 45567999999999 689999999999999999999999 899999999998865 4999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+++||||+..|+.+ |+++|+.+|++.||++....+.+ ..||+++.++.||..++|
T Consensus 170 ~~~~igD~~~Di~~----A~~aG~~~i~v~~g~~~~~~l~~--~~~d~~v~~l~dL~~iie 224 (224)
T d2hsza1 170 QILFVGDSQNDIFA----AHSAGCAVVGLTYGYNYNIPIAQ--SKPDWIFDDFADILKITQ 224 (224)
T ss_dssp GEEEEESSHHHHHH----HHHHTCEEEEESSSCSTTCCGGG--GCCSEEESSGGGGGGGTC
T ss_pred ccchhcCcHHHHHH----HHHcCCeEEEEeCCCCCcchhhh--cCCCEEECCHHHHHHhhC
Confidence 99999999999999 99999999999999887766655 579999999999999986
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.96 E-value=2.8e-29 Score=202.32 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=110.3
Q ss_pred hccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 135 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 135 ~~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....+++||+.++|+ +++++++|+||+....+...+++ +|+..+|+.+++++. ||+|++++.+.++++++|++
T Consensus 78 ~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 156 (207)
T d2hdoa1 78 YDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRS-YPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQN 156 (207)
T ss_dssp GGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTT-SGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGG
T ss_pred ccccccccchhhhhhhhccccccccccccccccccccccc-ccccccccccccccccccchhhhhhhcccccceeeeccc
Confidence 455689999999992 45799999999999999999999 899999999998864 49999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhh
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 266 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~ 266 (268)
|+|||||.+|+.+ |+++|+.+|++.||+++..+.. .+++.+.++.||.++
T Consensus 157 ~l~VgDs~~Di~~----a~~aG~~~i~v~~g~~~~~~~~----~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 157 ALFIGDSVSDEQT----AQAANVDFGLAVWGMDPNADHQ----KVAHRFQKPLDILEL 206 (207)
T ss_dssp EEEEESSHHHHHH----HHHHTCEEEEEGGGCCTTGGGS----CCSEEESSGGGGGGG
T ss_pred eeEecCCHHHHHH----HHHcCCeEEEEecCCCChhHhh----hcCcEeCCHHHHHhh
Confidence 9999999999999 9999999999999988776654 478999999998776
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.96 E-value=4.6e-29 Score=207.50 Aligned_cols=129 Identities=12% Similarity=0.038 Sum_probs=109.4
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC-CeEEecCC----CChHHHHHHHHhcCCCC-
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLGT----GPKVEVLKQLQKKPELQ- 205 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f-~~i~~~~~----~pk~~~~~~~~~~~~~~- 205 (268)
.....++||+.++| +++|++++|+||+++..++..++. +|+..+| |.+++++. ||+|+++..+++++++.
T Consensus 95 ~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~-~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p 173 (257)
T d1swva_ 95 PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKE-AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 173 (257)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHH-HHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred hccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHH-HhhcccccccccccccccccccChHHHHHHHHHhCCCC
Confidence 45568999999999 689999999999999999999999 7998876 78888764 48999999999999985
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCC----HHHHHh-----------------hcCCCCEEEcCHhHHH
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT----QKEREE-----------------AASIPRIQLLQLSDFS 264 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~----~~~~~~-----------------~~~~p~~~~~~~~~l~ 264 (268)
+++|+||||+..|+.+ |+++||.+|+|.||++. .+++.. ....||++++++.||+
T Consensus 174 ~~~~v~VgDs~~Di~a----A~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~ 249 (257)
T d1swva_ 174 MNHMIKVGDTVSDMKE----GRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELE 249 (257)
T ss_dssp GGGEEEEESSHHHHHH----HHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHH
T ss_pred cceEEEEeCChhhHHH----HHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHH
Confidence 5999999999999999 99999999999999752 222111 1145999999999999
Q ss_pred hhcC
Q 024415 265 RKLK 268 (268)
Q Consensus 265 ~~l~ 268 (268)
.+|+
T Consensus 250 ~ii~ 253 (257)
T d1swva_ 250 SVME 253 (257)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8873
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.3e-29 Score=205.64 Aligned_cols=125 Identities=12% Similarity=0.122 Sum_probs=109.2
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
....+++||+.++| +++|++++|+||+++..++..++. +|+..+|+.+++++. ||+|++++.+.++++++|+
T Consensus 84 ~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~ 162 (218)
T d1te2a_ 84 EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM-FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPL 162 (218)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGG
T ss_pred hccccccchHHHHHHHhhhcccccccccccccccccccccc-ccccccccccccccccccchhhHHHHHHHHHHcCCCch
Confidence 34557899999999 689999999999999999999999 899999999999875 4889999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH--Hhhc
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF--SRKL 267 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l--~~~l 267 (268)
+++||||+..|+.+ |+++|+.+|+|.++.... +... ..|++++.++.|| .++|
T Consensus 163 ~~l~igD~~~di~a----A~~~G~~~i~v~~~~~~~-~~~~--~~a~~~i~~l~el~~~~l~ 217 (218)
T d1te2a_ 163 TCVALEDSVNGMIA----SKAARMRSIVVPAPEAQN-DPRF--VLANVKLSSLTELTAKDLL 217 (218)
T ss_dssp GEEEEESSHHHHHH----HHHTTCEEEECCCTTTTT-CGGG--GGSSEECSCGGGCCHHHHH
T ss_pred hcEEEeeCHHHHHH----HHHcCCEEEEECCCCCcc-chhh--cCCCEEECChhhCCHhhcC
Confidence 99999999999999 999999999998775433 3222 4688999999997 4555
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=1.6e-28 Score=200.97 Aligned_cols=125 Identities=17% Similarity=0.158 Sum_probs=109.0
Q ss_pred hccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 135 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 135 ~~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
.....++||+.++|+ ++|++++++||++...+...++. +|+..+|+.+++++. ||+|++++.+.++++++|++
T Consensus 96 ~~~~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~ 174 (230)
T d1x42a1 96 QRYGELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDA-LGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174 (230)
T ss_dssp HHHCCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHH-HTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred HhhCcccccHHHHHHHhhccCceeeeeccccccchhhhcc-cccccccccccccccccccchhhHHHHHHHhhhcccccc
Confidence 344678999999993 57899999999999999999999 799999999998853 59999999999999999999
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
|+||||+. +|+++ |+++|+.+|++.++.... ... ..||+++.|++||.++|+
T Consensus 175 ~l~vgD~~~~Di~~----A~~~G~~~v~v~~~~~~~-~~~---~~~d~~i~~l~el~~~l~ 227 (230)
T d1x42a1 175 AVYVGDNPVKDCGG----SKNLGMTSILLDRKGEKR-EFW---DKCDFIVSDLREVIKIVD 227 (230)
T ss_dssp EEEEESCTTTTHHH----HHTTTCEEEEECTTSCCG-GGG---GGSSEEESSTTHHHHHHH
T ss_pred cceeecCcHhHHHH----HHHcCCEEEEECCCCCCc-ccc---cCCCEEECCHHHHHHHHH
Confidence 99999995 79999 999999999998875443 322 358999999999998874
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.95 E-value=1.5e-28 Score=200.84 Aligned_cols=124 Identities=10% Similarity=-0.016 Sum_probs=107.3
Q ss_pred cCCCCCChHHHH---HcCC-CeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHh---cCCCC
Q 024415 137 ANRFYPGIPDAL---KFAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQK---KPELQ 205 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g-~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~---~~~~~ 205 (268)
..+++||+.++| +++| ++++|+||++...+...++. +|+..+||.+++++. +|+|+++..... ..+++
T Consensus 89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~ 167 (228)
T d2hcfa1 89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKL-PGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYS 167 (228)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHT-TTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCC
T ss_pred CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhh-hcccccccccccccccccccchhHHHHHHhhhhcccCCC
Confidence 457899999999 5666 89999999999999999999 899999999998875 377776543332 34789
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|++|+||||+.+|+.+ |+++||.+|+|.||....+++.. ..||+++.++.||..+|
T Consensus 168 p~~~l~VGD~~~Di~a----A~~aG~~~i~v~~g~~~~~~l~~--~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 168 PSQIVIIGDTEHDIRC----ARELDARSIAVATGNFTMEELAR--HKPGTLFKNFAETDEVL 223 (228)
T ss_dssp GGGEEEEESSHHHHHH----HHTTTCEEEEECCSSSCHHHHHT--TCCSEEESCSCCHHHHH
T ss_pred hhHheeecCChHHHHH----HHHcCCEEEEEcCCCCCHHHHhh--CCCCEEECCHHHHHHHH
Confidence 9999999999999999 99999999999999888888776 57999999999999876
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=6.8e-28 Score=193.59 Aligned_cols=118 Identities=19% Similarity=0.166 Sum_probs=104.3
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~ 207 (268)
.....++||+.++| +++|++++|+||++.. +...+++ +|+..+|+.+++++. +|+|++++.+.++++++|+
T Consensus 78 ~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~-~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~ 155 (204)
T d2go7a1 78 NAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKD-LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD 155 (204)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHH-HTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred cccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhh-cccccccccccccccccccchhHHHHHHHHHHhCCCCc
Confidence 55678999999999 6899999999998874 5668899 799999999998864 4999999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
+|+||||+.+|+.+ |+++||.+|++.+|.. .+++.+.++.|+.++++
T Consensus 156 ~~l~VgD~~~Di~~----A~~~G~~~i~v~~~~~----------~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 156 NTYYIGDRTLDVEF----AQNSGIQSINFLESTY----------EGNHRIQALADISRIFE 202 (204)
T ss_dssp GEEEEESSHHHHHH----HHHHTCEEEESSCCSC----------TTEEECSSTTHHHHHTS
T ss_pred eEEEEeCCHHHHHH----HHHcCCeEEEEcCCCC----------CcCeecCCHHHHHHHhc
Confidence 99999999999999 9999999999988742 35688899999998874
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.94 E-value=2.8e-26 Score=188.60 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=108.8
Q ss_pred ccCCCCCChHHHH-HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 136 GANRFYPGIPDAL-KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 136 ~~~~~~pg~~e~L-~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
...+++|++.++| +.+++.++++||++...+...++. .|+..+||.+++++. ||+|+++++++++++++|++|+
T Consensus 90 ~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~-~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l 168 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (245)
T ss_dssp GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred cccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhh-cccccccccccccccccccCccHHHHHHHHHHhCCChhhEE
Confidence 3467899999999 558899999999999999999999 899999999999875 5999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCCCCHHHH---------------------HhhcCCCCEEEcCHhHHHhhcC
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER---------------------EEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~---------------------~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
||||+..|+.+ |+++||.+|||+++.. .... ......||+++.++.||+.+++
T Consensus 169 ~VgD~~~di~~----A~~aG~~tv~v~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~ 242 (245)
T d1qq5a_ 169 FVSSNGFDVGG----AKNFGFSVARVARLSQ-EALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVR 242 (245)
T ss_dssp EEESCHHHHHH----HHHHTCEEEEECCSCH-HHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHH
T ss_pred EEeCCHHHHHH----HHHcCCeEEEEcCCCc-ccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHH
Confidence 99999999999 9999999999986421 1111 1112469999999999999874
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=7.7e-26 Score=183.57 Aligned_cols=126 Identities=13% Similarity=0.078 Sum_probs=109.0
Q ss_pred hccCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEe-cC------CCChHHHHHHHHhcCCCCCC
Q 024415 135 IGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG-LG------TGPKVEVLKQLQKKPELQGM 207 (268)
Q Consensus 135 ~~~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~-~~------~~pk~~~~~~~~~~~~~~~~ 207 (268)
.....++||+.++|++.+.+.+++||.....+...+++ +|+..+|+.++. ++ .||+|+++..+++++++.|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~ 159 (222)
T d2fdra1 81 ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK-VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD 159 (222)
T ss_dssp HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHH-TTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGG
T ss_pred hhccchhhhHHHHhhhccccceeeeecchhhhhhhhcc-cccccccceeecccccccccccccCHHHHHHHHHhhCCCCc
Confidence 45678999999999877889999999999999999999 899999987544 32 15889999999999999999
Q ss_pred cEEEEecCccchhcccccccccCCeEEEeecCCCCH----HHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 208 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ----KEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 208 ~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~----~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
+|+||||+..|+.+ |+++||.+|++.+|+... +.+.. ..|++++.++.||..+|
T Consensus 160 ~~l~vgDs~~dv~a----A~~aG~~~i~v~~~~~~~~~~~~~l~~--~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 160 RVVVVEDSVHGIHG----ARAAGMRVIGFTGASHTYPSHADRLTD--AGAETVISRMQDLPAVI 217 (222)
T ss_dssp GEEEEESSHHHHHH----HHHTTCEEEEECCSTTCCTTHHHHHHH--HTCSEEESCGGGHHHHH
T ss_pred eEEEEcCCHHHHHH----HHHcCCEEEEEccCCCCCcchHHHHHh--CCCCEEECCHHHHHHHH
Confidence 99999999999999 999999999999987432 33443 46899999999999886
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.93 E-value=3.2e-26 Score=185.38 Aligned_cols=124 Identities=16% Similarity=0.183 Sum_probs=109.8
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++|++.++| +.+|++++++||+.....+..++. .++..+||.+++++. ||+|+++++++++.++.|++
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~-~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e 168 (220)
T d1zrna_ 90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 168 (220)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-TTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhh-ccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCce
Confidence 4467889999988 699999999999999999999999 899999999999864 59999999999999999999
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
|+||||+..|+.+ |+++||.+|++.++.....++ ...||+++.++.+|.+++
T Consensus 169 ~l~VgD~~~Di~~----A~~aG~~~v~v~r~~~~~~~~---~~~~d~~i~~l~el~~l~ 220 (220)
T d1zrna_ 169 ILFVASNAWDATG----ARYFGFPTCWINRTGNVFEEM---GQTPDWEVTSLRAVVELF 220 (220)
T ss_dssp EEEEESCHHHHHH----HHHHTCCEEEECTTCCCCCSS---SCCCSEEESSHHHHHTTC
T ss_pred EEEEecChHhHHH----HHHcCCEEEEEcCCCCCcccc---cCCCCEEECCHHHHHhhC
Confidence 9999999999999 999999999998764444333 357999999999998864
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.93 E-value=1.7e-27 Score=193.34 Aligned_cols=96 Identities=17% Similarity=0.106 Sum_probs=87.1
Q ss_pred cCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcE
Q 024415 137 ANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 137 ~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~ 209 (268)
...++||+.++| +++|++++++||+.. .+..++. .|+..+|+.+++++. ||+|++++.++++++++|++|
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~ 165 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLER-MNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHH-TTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHh-hccccccccccccccccccccChHHHHHHHHHcCCCCceE
Confidence 457899999999 799999999999754 5678888 799999999988864 499999999999999999999
Q ss_pred EEEecCccchhcccccccccCCeEEEeecC
Q 024415 210 HFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 210 l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
+||||+..|+.+ |+++||++|+|.++
T Consensus 166 l~VgD~~~di~~----A~~aG~~~i~v~~~ 191 (221)
T d1o08a_ 166 IGLEDSQAGIQA----IKDSGALPIGVGRP 191 (221)
T ss_dssp EEEESSHHHHHH----HHHHTCEEEEESCH
T ss_pred EEEecCHHHHHH----HHHcCCEEEEECCh
Confidence 999999999999 99999999999875
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.92 E-value=2.4e-25 Score=183.48 Aligned_cols=127 Identities=11% Similarity=0.054 Sum_probs=106.4
Q ss_pred hccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 135 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 135 ~~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
.....++||+.++|+ ++|++++++||++...+...++. +|+..+||.+++++. ||+|++++.++++.+++|++
T Consensus 105 ~~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~ 183 (247)
T d2gfha1 105 LQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEA-CACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGD 183 (247)
T ss_dssp HHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHH-HTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGG
T ss_pred hccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhh-ccccccccccccccccccchhhhhhHHHHHHHhhcCHHh
Confidence 455679999999992 46899999999999999999999 899999999998864 59999999999999999999
Q ss_pred EEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 209 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 209 ~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
|+||||+. +|+.+ |+++||.++.+.++.+..... ....|++++.++.||..+|+
T Consensus 184 ~l~iGD~~~~Di~~----A~~~G~~~~~~~~~~~~~~~~--~~~~p~~~i~~l~eL~~ll~ 238 (247)
T d2gfha1 184 CVMVGDTLETDIQG----GLNAGLKATVWINKSGRVPLT--SSPMPHYMVSSVLELPALLQ 238 (247)
T ss_dssp EEEEESCTTTHHHH----HHHTTCSEEEEECTTCCCCSS--CCCCCSEEESSGGGHHHHHH
T ss_pred cceeccChHhHHHH----HHHcCCeEEEEECCCCCCccc--ccCCCCEEECCHHHHHHHHH
Confidence 99999996 79999 999999865544443322222 23579999999999998874
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.91 E-value=3.8e-24 Score=169.51 Aligned_cols=98 Identities=15% Similarity=0.235 Sum_probs=85.7
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCc
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMT 208 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~ 208 (268)
....++||+.++| +++|++++|+||++....+ .+++ +++..+|+.+++++. ||+|++++.+.++++.. +
T Consensus 76 ~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~--~ 151 (187)
T d2fi1a1 76 EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEK-TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--S 151 (187)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHH-TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--S
T ss_pred hcCcccchhHHHHHHHHhhhccccccccCccchhh-hhhh-hccccccccccccccccccCCCHHHHHHHHHHcCCC--C
Confidence 4568999999999 7999999999999886654 6888 799999999998864 58899999999988864 5
Q ss_pred EEEEecCccchhcccccccccCCeEEEeecCCC
Q 024415 209 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYN 241 (268)
Q Consensus 209 ~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~ 241 (268)
++||||+..|+++ |+++|+++++++++.+
T Consensus 152 ~l~vgDs~~Di~a----A~~aG~~~i~v~~~~~ 180 (187)
T d2fi1a1 152 GLVIGDRPIDIEA----GQAAGLDTHLFTSIVN 180 (187)
T ss_dssp EEEEESSHHHHHH----HHHTTCEEEECSCHHH
T ss_pred eEEEeCCHHHHHH----HHHcCCEEEEECCCCC
Confidence 8999999999999 9999999999987643
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=8.6e-24 Score=173.29 Aligned_cols=122 Identities=11% Similarity=0.085 Sum_probs=101.7
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEec-C----CCChHHHHHHHHhcCCCCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-G----TGPKVEVLKQLQKKPELQG 206 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~-~----~~pk~~~~~~~~~~~~~~~ 206 (268)
.....++||+.++| +++|++++|+||++...+...++. .|+..+|+..... + .||+|++++.+++++++.|
T Consensus 123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p 201 (253)
T d1zs9a1 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH-STEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST 201 (253)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT-BTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHH-cCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence 34457899999999 689999999999999999999999 8998887754332 2 2699999999999999999
Q ss_pred CcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 207 MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 207 ~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
++|+||||+..|+.+ |+++||++|+|.++.+......+ ..|+.+++|++||
T Consensus 202 ~~~l~vgD~~~dv~a----A~~aG~~ti~v~r~g~~~~~~~~--~~~~~~i~sl~EL 252 (253)
T d1zs9a1 202 NNILFLTDVTREASA----AEEADVHVAVVVRPGNAGLTDDE--KTYYSLITSFSEL 252 (253)
T ss_dssp GGEEEEESCHHHHHH----HHHTTCEEEEECCTTCCCCCHHH--HHHSCEESSGGGC
T ss_pred CcEEEEeCCHHHHHH----HHHcCCEEEEEeCCCCCCCchhh--cCCCcEECChHHh
Confidence 999999999999999 99999999999876443332222 2366899999986
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=5.1e-23 Score=159.74 Aligned_cols=106 Identities=15% Similarity=0.119 Sum_probs=91.6
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCH-HHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEE
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQS-RFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 211 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~-~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~ 211 (268)
...+++||+.++| +++|++++|+||+++ ...+..++. +++..+|+.+.+. .+|+|+.+..+.++++++|++++|
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~-~~~~~~~~~~~~~-~kp~~~~~~~~~~~~~~~~~~~l~ 120 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLEL-FDLGKYFIQREIY-PGSKVTHFERLHHKTGVPFSQMVF 120 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHH-TTCGGGCSEEEES-SSCHHHHHHHHHHHHCCCGGGEEE
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhc-ccccccceeeecc-cCCChHHHHHHHHHhCCChHHEEE
Confidence 3457999999999 799999999998765 456777888 7998888877654 459999999999999999999999
Q ss_pred EecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 212 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 212 IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
|||+..|+++ |+++|+.+|+|.+|+ +.+.+++
T Consensus 121 igD~~~di~a----A~~aG~~~i~v~~G~-~~~~~~~ 152 (164)
T d1u7pa_ 121 FDDENRNIID----VGRLGVTCIHIRDGM-SLQTLTQ 152 (164)
T ss_dssp EESCHHHHHH----HHTTTCEEEECSSCC-CHHHHHH
T ss_pred EcCCHHHHHH----HHHcCCEEEEECCCC-ChHHHHH
Confidence 9999999999 999999999999997 5555554
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=3.8e-23 Score=167.15 Aligned_cols=109 Identities=16% Similarity=0.058 Sum_probs=93.2
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCC----HHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCC
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQ----SRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPE 203 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~----~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~ 203 (268)
.....++||+.++| +++|++++++||+. .......+.. .|+..+||.+++++. ||+|++++.++++++
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~-~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMM-CELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHH-HHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHh-cChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence 34567899999999 79999999999853 3345555666 689999999999863 599999999999999
Q ss_pred CCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 204 LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 204 ~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
++|++|+||||+..|+.+ |+++||.+|+|.++....+++++
T Consensus 172 v~p~~~l~IgD~~~Di~~----A~~aG~~ti~V~~~~~~~~el~~ 212 (222)
T d1cr6a1 172 AKPNEVVFLDDFGSNLKP----ARDMGMVTILVHNTASALRELEK 212 (222)
T ss_dssp SCTTSEEEEESSSTTTHH----HHHHTCEEEECCSSSHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHH----HHHcCCEEEEECCcchHHHHHHH
Confidence 999999999999999999 99999999999988666666665
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=8.5e-22 Score=158.54 Aligned_cols=108 Identities=17% Similarity=0.039 Sum_probs=89.6
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHH----HHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSR----FADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPEL 204 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~----~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~ 204 (268)
....++||+.++| +++|++++++||.... ........ .++..+||.+++++. ||+|++++++++++++
T Consensus 96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~ 174 (225)
T d1zd3a1 96 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 174 (225)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred hcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhhccEEEeccccccchhHHHHHHHHhhhccc
Confidence 4456889999998 6899999999987543 23333444 478889999999863 5999999999999999
Q ss_pred CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 205 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 205 ~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
.|++|+||||+..|+.+ |+++||.+|+|.++....+++++
T Consensus 175 ~p~e~l~VgD~~~Di~~----A~~~G~~ti~v~~~~~~~~~l~~ 214 (225)
T d1zd3a1 175 SPSEVVFLDDIGANLKP----ARDLGMVTILVQDTDTALKELEK 214 (225)
T ss_dssp CGGGEEEEESCHHHHHH----HHHTTCEEEECSSHHHHHHHHHH
T ss_pred CccceeEEecCHHHHHH----HHHcCCEEEEECCcchhHHHHHH
Confidence 99999999999999999 99999999999887655556655
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=5.7e-20 Score=144.69 Aligned_cols=121 Identities=20% Similarity=0.200 Sum_probs=92.6
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHH---------------HHHHHHHHhcCCCCCCCeEEec--------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSR---------------FADALLRELAGVTIPPDRIYGL-------------- 186 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~---------------~~~~~l~~~~gl~~~f~~i~~~-------------- 186 (268)
+++||+.++| +++|++++++||.+.- .....+.. .|+. ..+..+|.
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~cp~~p~~~~~~~~~~~ 104 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD-RDVD-LDGIYYCPHHPQGSVEEFRQVC 104 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH-TTCC-CSEEEEECCBTTCSSGGGBSCC
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhh-hccc-ccceeecccccccccccccccc
Confidence 4779999988 6899999999998641 22223333 3442 22223332
Q ss_pred -CCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCe-EEEeecCCCCHHHHHhhcCCCCEEEcCHhHHH
Q 024415 187 -GTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN-LYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 264 (268)
Q Consensus 187 -~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~-~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 264 (268)
..||+|.++..+.+++++.+++++||||+.+|+++ |++||+. ++++.+|+......+. .||++++++.|+.
T Consensus 105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~a----A~~Ag~~~~~lv~~g~~~~~~~~~---~ad~v~~~l~dl~ 177 (182)
T d2gmwa1 105 DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQA----AVAANVGTKVLVRTGKPITPEAEN---AADWVLNSLADLP 177 (182)
T ss_dssp SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHH----HHHTTCSEEEEESSSSCCCHHHHH---HCSEEESCGGGHH
T ss_pred cccCCccccccchhhhcccccccccccCCCHHHHHH----HHHhCCCcEEEECCCCCCCccccc---CCCEEECCHHHHH
Confidence 23699999999999999999999999999999999 9999995 5788888766555543 4889999999999
Q ss_pred hhcC
Q 024415 265 RKLK 268 (268)
Q Consensus 265 ~~l~ 268 (268)
++|+
T Consensus 178 ~~ik 181 (182)
T d2gmwa1 178 QAIK 181 (182)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8874
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.79 E-value=4.2e-20 Score=148.88 Aligned_cols=118 Identities=12% Similarity=0.112 Sum_probs=91.6
Q ss_pred ccCCCCCChHHHHHcCCCeEEEEcCCCHHHHHHH-----------HHHhcCCCCCCCeEEecCC---CChHHHHHHHHhc
Q 024415 136 GANRFYPGIPDALKFASSRIYIVTTKQSRFADAL-----------LRELAGVTIPPDRIYGLGT---GPKVEVLKQLQKK 201 (268)
Q Consensus 136 ~~~~~~pg~~e~L~~~g~~i~ivTn~~~~~~~~~-----------l~~~~gl~~~f~~i~~~~~---~pk~~~~~~~~~~ 201 (268)
....+++++.+++. .+..+++.|+......... ++. .|+..+|+.|++++. ||+|+++..++++
T Consensus 94 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~ 171 (225)
T d2g80a1 94 IKAPVYADAIDFIK-RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-LDLNSYIDGYFDINTSGKKTETQSYANILRD 171 (225)
T ss_dssp CCBCCCHHHHHHHH-HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCC-BCCGGGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHh-hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHh-cCCccccceeeeccccCCCCChhHhHHHHHh
Confidence 33457777777764 4467889998877654444 344 588889999988753 6999999999999
Q ss_pred CCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 202 PELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 202 ~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
++++|++|+||||+..|+.+ |+++||++|+|.+..+.. . .+ ..|+..+.+++||
T Consensus 172 lg~~p~e~l~VgD~~~Dv~~----A~~aG~~ti~v~r~g~~~-~-~~--~~~~~~i~~~~eL 225 (225)
T d2g80a1 172 IGAKASEVLFLSDNPLELDA----AAGVGIATGLASRPGNAP-V-PD--GQKYQVYKNFETL 225 (225)
T ss_dssp HTCCGGGEEEEESCHHHHHH----HHTTTCEEEEECCTTSCC-C-CS--SCCSCEESCSTTC
T ss_pred cccCchhceeecCCHHHHHH----HHHcCCEEEEEeCCCCCC-C-cc--cCCCCccCChhhC
Confidence 99999999999999999999 999999999998653322 1 11 3567788888875
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=4.5e-21 Score=150.78 Aligned_cols=99 Identities=11% Similarity=0.152 Sum_probs=86.5
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC----CChHHHHHHHHhcCCCCCCcEE
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT----GPKVEVLKQLQKKPELQGMTLH 210 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~----~pk~~~~~~~~~~~~~~~~~~l 210 (268)
..+++|+.+++ +.+|++++++||++.......+..+.|+..+|+.+++++. ||+|++++.+.++.+++|++|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l 162 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV 162 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEE
Confidence 46788888887 6999999999998887777667762378889999998853 5999999999999999999999
Q ss_pred EEecCccchhcccccccccCCeEEEeecCC
Q 024415 211 FVEDRLATLKNVIKEPELDGWNLYLGDWGY 240 (268)
Q Consensus 211 ~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~ 240 (268)
||||+..|+++ |+++|+.+|+|+.+.
T Consensus 163 ~vgDs~~di~~----A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 163 FFDDNADNIEG----ANQLGITSILVKDKT 188 (197)
T ss_dssp EEESCHHHHHH----HHTTTCEEEECCSTT
T ss_pred EEeCCHHHHHH----HHHcCCEEEEECCCC
Confidence 99999999999 999999999998664
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.77 E-value=5.5e-20 Score=149.02 Aligned_cols=123 Identities=8% Similarity=0.119 Sum_probs=92.7
Q ss_pred hccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe---EEecC--------------CCChHHH
Q 024415 135 IGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR---IYGLG--------------TGPKVEV 194 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~---i~~~~--------------~~pk~~~ 194 (268)
....+++||+.++| +++|++++++||+.+..++..+++ +|+.++|.. .+..+ .+|++..
T Consensus 71 ~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~-l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 149 (226)
T d2feaa1 71 LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 149 (226)
T ss_dssp HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTT-TSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred HhccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHH-cCCccceeeeeEEEeCCcceeccccccccccccCCHHH
Confidence 34567999999998 699999999999999999999999 787655421 11000 1367888
Q ss_pred HHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 195 LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 195 ~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
...++++++..+++++|||||.+|+.+ |++||+ .+++.+ ..+.... ...|+..+.+++|+...|
T Consensus 150 ~~~~~~~~~~~~~~~i~iGDs~~Dl~~----a~~A~~-~~a~~~---~~~~~~~-~~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 150 KPSVIHELSEPNQYIIMIGDSVTDVEA----AKLSDL-CFARDY---LLNECRE-QNLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHH----HHTCSE-EEECHH---HHHHHHH-TTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEEeCchhhHHH----HHHCCE-EEEecc---hHHHHHH-cCCCeeecCCHHHHHHHH
Confidence 888888999999999999999999999 999997 333332 1223322 245778889999977655
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.76 E-value=2.3e-18 Score=142.72 Aligned_cols=76 Identities=21% Similarity=0.251 Sum_probs=71.0
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
||+|.++..++++++++|++++||||+. +||.+ |+++||.+|||.+|+...+++......||+++.++.||..+|
T Consensus 185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~g----a~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKL----GKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHH----HHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CCcHHHHHHHHhhhccCchhcceecCChhHHHHH----HHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 5899999999999999999999999995 69999 999999999999999888888877778999999999999998
Q ss_pred C
Q 024415 268 K 268 (268)
Q Consensus 268 ~ 268 (268)
|
T Consensus 261 ~ 261 (261)
T d1vjra_ 261 Q 261 (261)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=2.1e-19 Score=138.38 Aligned_cols=101 Identities=18% Similarity=0.216 Sum_probs=75.7
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCC---------------HHHHHHHHHHhcCCCCCCCeE-Ee----cC----CCC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRI-YG----LG----TGP 190 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~---------------~~~~~~~l~~~~gl~~~f~~i-~~----~~----~~p 190 (268)
..++||+.++| +++|++++++||.+ .......+.. .|+. ++.| ++ .+ .||
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~KP 105 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS-QGVQ--FDEVLICPHLPADECDCRKP 105 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHH-TTCC--EEEEEEECCCGGGCCSSSTT
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccc-cccc--cceeeecccccccccccccc
Confidence 35889999998 68999999999975 1233445565 5663 3333 22 22 269
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHH
Q 024415 191 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 245 (268)
Q Consensus 191 k~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~ 245 (268)
+|.++.++.+++++.|++++||||+..|+++ |+++||+++++.++..++..
T Consensus 106 ~p~~~~~~~~~~~id~~~~~~IGD~~~Di~a----A~~aG~~~i~i~~~~~~~~~ 156 (161)
T d2fpwa1 106 KVKLVERYLAEQAMDRANSYVIGDRATDIQL----AENMGINGLRYDRETLNWPM 156 (161)
T ss_dssp SSGGGGGGC----CCGGGCEEEESSHHHHHH----HHHHTSEEEECBTTTBCHHH
T ss_pred ccHHHHHHHHhcCCChhcEEEECCCHHHHHH----HHHcCCeEEEECCCCCCHHH
Confidence 9999999999999999999999999999999 99999999999887655543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=6.6e-19 Score=145.28 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=67.1
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHh
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 265 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~ 265 (268)
||+|++++.+++++++.|++|+||||++ +||.+ |+++||.+|+|.||+...++++.....||+++.|+.||+-
T Consensus 176 KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~----a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~~ 249 (250)
T d2c4na1 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILA----GFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEIDV 249 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHH----HHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCCC
T ss_pred cchhhhHhhhhhhhcCCchheEEecCChHHHHHH----HHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhCc
Confidence 5889999999999999999999999996 59999 9999999999999988888888777789999999999763
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.74 E-value=1.3e-18 Score=139.51 Aligned_cols=114 Identities=23% Similarity=0.203 Sum_probs=83.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCH---------------HHHHHHHHHhcCCCCCCCeEEecC-------------
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGLG------------- 187 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~---------------~~~~~~l~~~~gl~~~f~~i~~~~------------- 187 (268)
.++||+.++| +++|++++|+||.+. ......++. .|+ +++.++...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~-~g~--~~~~~~~~~~~~~~~~~~~~~~ 124 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLRE-EGV--FVDMVLACAYHEAGVGPLAIPD 124 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHH-TTC--CCSEEEEECCCTTCCSTTCCSS
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhh-ccc--ccceEEEecccccccccccccc
Confidence 4778888888 699999999999541 122333444 344 344443321
Q ss_pred ---CCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCE---EEcCHh
Q 024415 188 ---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRI---QLLQLS 261 (268)
Q Consensus 188 ---~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~---~~~~~~ 261 (268)
.||+|.++.++.+++++++++++||||+.+|+++ |++|||.++++.+|++.. .|+. .+.++.
T Consensus 125 ~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~a----A~~AGi~~i~v~~g~~~~--------~~~~~~~~~~~~~ 192 (209)
T d2o2xa1 125 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQA----GKRAGLAQGWLVDGEAAV--------QPGFAIRPLRDSS 192 (209)
T ss_dssp CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHH----HHHTTCSEEEEETCCCEE--------ETTEEEEEESSHH
T ss_pred cccccccchhhhHhHHHhCCCccceEEeCCCHHHHHH----HHHCCCcEEEEeCCCCcc--------cCCccccCccchh
Confidence 2699999999999999999999999999999999 999999999999886533 1333 345555
Q ss_pred HHHhhc
Q 024415 262 DFSRKL 267 (268)
Q Consensus 262 ~l~~~l 267 (268)
++.++|
T Consensus 193 e~~dll 198 (209)
T d2o2xa1 193 ELGDLL 198 (209)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.4e-16 Score=128.34 Aligned_cols=115 Identities=10% Similarity=0.127 Sum_probs=82.9
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCC----------CeEEec-CCC-------ChHHH
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPP----------DRIYGL-GTG-------PKVEV 194 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f----------~~i~~~-~~~-------pk~~~ 194 (268)
...+++||+.+++ +++|++++|+|++....++.+++. +|+..+. +..++. ... .|...
T Consensus 79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~-lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~ 157 (217)
T d1nnla_ 79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASK-LNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKV 157 (217)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHH
T ss_pred hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHH-hCCcccceeeeeeeeeehhccccceeeeeeeccchHHHH
Confidence 3457899999999 799999999999999999999999 7986321 111111 111 25677
Q ss_pred HHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCH-HHHHhhcCCCCEEEcCHhHH
Q 024415 195 LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ-KEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 195 ~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~-~~~~~~~~~p~~~~~~~~~l 263 (268)
++.+... ..++++++||||.+|+.+ ++.+|+. |+++. +.. .... ..+++.+.++.||
T Consensus 158 v~~~~~~--~~~~~~~~vGDs~~Di~~----~~~ag~~-va~~~--~~~~~~~~---~~ad~~i~~f~el 215 (217)
T d1nnla_ 158 IKLLKEK--FHFKKIIMIGDGATDMEA----CPPADAF-IGFGG--NVIRQQVK---DNAKWYITDFVEL 215 (217)
T ss_dssp HHHHHHH--HCCSCEEEEESSHHHHTT----TTTSSEE-EEECS--SCCCHHHH---HHCSEEESCGGGG
T ss_pred HHHHHhc--cCccccEEEEeCHhhHHH----HHhCCce-EEECC--CHHHHHHH---HhCCCEeCCHHHh
Confidence 7777654 456789999999999999 9999974 44432 222 2222 2477999988876
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.66 E-value=2.7e-17 Score=135.67 Aligned_cols=71 Identities=13% Similarity=0.195 Sum_probs=66.2
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
||.|++++.++++.+++|++|+||||+. +||.+ |+++||.+|+|.+|+.+.+++......||+++.|+.||
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~g----A~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITA----GIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHH----HHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHH----HHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 7999999999999999999999999996 59999 99999999999999887777777778899999999986
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.61 E-value=2.2e-16 Score=130.08 Aligned_cols=71 Identities=13% Similarity=0.221 Sum_probs=65.6
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEecCc-cchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 189 GPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 189 ~pk~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
||+|++++++++..+++|++++||||+. +||++ |+++|+++|+|.+|+...++..+....||+++.|+.||
T Consensus 180 KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~----a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 180 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQS----GIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp TTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHH----HHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred ccchhHHHHHHHHhCCCccceEEecCChHHHHHH----HHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 6999999999999999999999999996 69999 99999999999999877777777777899999999986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.60 E-value=5.9e-16 Score=134.92 Aligned_cols=123 Identities=16% Similarity=0.035 Sum_probs=101.5
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe--EEecC---------------CCChHHHHHHH
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR--IYGLG---------------TGPKVEVLKQL 198 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~--i~~~~---------------~~pk~~~~~~~ 198 (268)
+++||+.++| +++|++++++||.+...+...++. +|+..+|+. +++++ .+|+|+++...
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~-lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN-LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 3556999998 799999999999999999999999 799999875 44322 14888888766
Q ss_pred Hh--------------cCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHH---HHHhhcCCCCEEEcCHh
Q 024415 199 QK--------------KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK---EREEAASIPRIQLLQLS 261 (268)
Q Consensus 199 ~~--------------~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~---~~~~~~~~p~~~~~~~~ 261 (268)
.. ..+..+++|+||||+++|+.+ |+++|+.+|+|.+|+.... ++.+ ..+|+++.++.
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~a----ak~Ag~~~Igv~~G~~g~~~~~el~~--~~AD~ii~~~~ 367 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLS----AQKIGATFIGTLTGLKGKDAAGELEA--HHADYVINHLG 367 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHH----HHHHTCEEEEESCBTTBGGGHHHHHH--TTCSEEESSGG
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHH----HHHCCCCEEEEecCCCCcccHHHHHh--CCCCEEECCHH
Confidence 54 346778999999999999999 9999999999999986543 3444 46889999999
Q ss_pred HHHhhcC
Q 024415 262 DFSRKLK 268 (268)
Q Consensus 262 ~l~~~l~ 268 (268)
||..+|.
T Consensus 368 el~~il~ 374 (380)
T d1qyia_ 368 ELRGVLD 374 (380)
T ss_dssp GHHHHHS
T ss_pred HHHHHHH
Confidence 9998863
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.59 E-value=3.1e-15 Score=118.39 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=93.8
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------------CChHHHHHHH
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------------GPKVEVLKQL 198 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------------~pk~~~~~~~ 198 (268)
...++++|+.+.+ +.+|..++++|+.....+....+. .+....+...+..+. .+++..+..+
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK-LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 150 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhc-cchhhhhhhhhccccccccccccccccccccccchhhhH
Confidence 4567889999998 699999999999999999998888 677666554433221 2568899999
Q ss_pred HhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc--CHhHHHhhcC
Q 024415 199 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKLK 268 (268)
Q Consensus 199 ~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~--~~~~l~~~l~ 268 (268)
....+++++++++||||.+|+.+ ++.||+. |++ . ..+.++. .+++++. ++.++...||
T Consensus 151 ~~~~~~~~~~~i~iGDs~nDi~m----~~~ag~~-va~-n---a~~~lk~---~Ad~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 151 AKIEGINLEDTVAVGDGANDISM----FKKAGLK-IAF-C---AKPILKE---KADICIEKRDLREILKYIK 210 (210)
T ss_dssp HHHHTCCGGGEEEEESSGGGHHH----HHHCSEE-EEE-S---CCHHHHT---TCSEEECSSCGGGGGGGCC
T ss_pred HHHhcccccceEEecCCcChHHH----HHHCCCC-EEE-C---CCHHHHH---hCCEEEcCCCHHHHHHHhC
Confidence 99999999999999999999999 9999985 444 2 2345554 4678887 5567777765
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.49 E-value=1.1e-14 Score=109.80 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=63.0
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHH---HHHHHHH----hcC-CCCCCCeEEecCCC---ChHHHHHHHHhcCCC
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRF---ADALLRE----LAG-VTIPPDRIYGLGTG---PKVEVLKQLQKKPEL 204 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~---~~~~l~~----~~g-l~~~f~~i~~~~~~---pk~~~~~~~~~~~~~ 204 (268)
.++||+.++| +++|++|+++||.+... +...|+. ... ...+++.......+ |+...-..+..+...
T Consensus 36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~ 115 (149)
T d1ltqa1 36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIA 115 (149)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhcc
Confidence 4678888888 68999999999976321 1122221 001 12345555554432 555554444444333
Q ss_pred CC-CcEEEEecCccchhcccccccccCCeEEEeecC
Q 024415 205 QG-MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 205 ~~-~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
.+ +-+++|||+..|+++ |+++|++++.|.||
T Consensus 116 ~~~~i~~~igD~~~dv~a----~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 116 PHFDVKLAIDDRTQVVEM----WRRIGVECWQVASG 147 (149)
T ss_dssp TTCEEEEEEECCHHHHHH----HHHTTCCEEECSCC
T ss_pred CCCceEEEEcCCHHHHHH----HHHCCCcEEEeCCC
Confidence 33 334788999999999 99999999999987
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.34 E-value=4.8e-12 Score=99.31 Aligned_cols=120 Identities=10% Similarity=0.040 Sum_probs=85.9
Q ss_pred ccCCCCCChHHHH--HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCC--------CChHHHHHHHHhcCCCC
Q 024415 136 GANRFYPGIPDAL--KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--------GPKVEVLKQLQKKPELQ 205 (268)
Q Consensus 136 ~~~~~~pg~~e~L--~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~--------~pk~~~~~~~~~~~~~~ 205 (268)
......++....+ ...+++.+++|++........... .++...+........ .+++...+...+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 144 (206)
T d1rkua_ 66 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 144 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred hhccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHH-hCCchhhcceeeeecccccccccccchhhHHHHHHHhccc
Confidence 4456778888877 478899999999999888888888 676544433322211 25566667777778889
Q ss_pred CCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCE-EEcCHhHHHhhc
Q 024415 206 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQLSDFSRKL 267 (268)
Q Consensus 206 ~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~-~~~~~~~l~~~l 267 (268)
++++++|||+.+|+.+ .+.||+. |+++ +.++.+. ..|++ ..++.+|+...|
T Consensus 145 ~~eviaiGDg~NDi~M----l~~Ag~g-IAmn----a~~~v~~--~~~~~~~~~~~~d~~~~~ 196 (206)
T d1rkua_ 145 YYRVIAAGDSYNDTTM----LSEAHAG-ILFH----APENVIR--EFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp TCEEEEEECSSTTHHH----HHHSSEE-EEES----CCHHHHH--HCTTSCEECSHHHHHHHH
T ss_pred ccceEEecCCccCHHH----HHhCCcc-EEEC----CCHHHHH--hCCCceeecCHHHHHHHH
Confidence 9999999999999999 9999984 4442 2234433 24666 568899987644
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.04 E-value=1e-09 Score=87.59 Aligned_cols=60 Identities=8% Similarity=-0.070 Sum_probs=47.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCH
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 260 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~ 260 (268)
.|..++++++++++++++++++|||+.+|+.+ .+.+|. .|++.++ .+.+++ .+++++.+.
T Consensus 151 ~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m----~~~a~~-~vav~na---~~~~k~---~ad~v~~~~ 210 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLEYDEILVIGDSNNDMPM----FQLPVR-KACPANA---TDNIKA---VSDFVSDYS 210 (225)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEECCSGGGHHH----HTSSSE-EEECTTS---CHHHHH---HCSEECSCC
T ss_pred chHHHHHHHhhhhccchhheeeecCCcchHHH----HHHCCe-EEEECCC---cHHHHH---hCCEEECCC
Confidence 56889999999999999999999999999999 999996 5555433 345555 366776554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.03 E-value=3.2e-10 Score=94.09 Aligned_cols=118 Identities=10% Similarity=0.083 Sum_probs=75.9
Q ss_pred hhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhhhhhhhccCCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHH
Q 024415 95 ENWSKIKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLR 171 (268)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~ 171 (268)
.+|+.-.-.++...+++.+... +... ....++.||+.+++ +++|++++|+|++-...++.+++
T Consensus 105 ~ew~~~~~~ll~~~~l~~~~i~-------~~v~-------~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~ 170 (291)
T d2bdua1 105 VEWYTKSHGLLIEQGIPKAKLK-------EIVA-------DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIR 170 (291)
T ss_dssp HHHHHHHHHHHHHHCCBGGGHH-------HHHH-------HSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHH-------HHHH-------hcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHH
Confidence 3454444555556666555521 1111 23467999999999 79999999999999999999999
Q ss_pred HhcCCCCCCCeEEecC-----C-------C------ChHHHHHHHHh--cCCCCCCcEEEEecCccchhcccccccccCC
Q 024415 172 ELAGVTIPPDRIYGLG-----T-------G------PKVEVLKQLQK--KPELQGMTLHFVEDRLATLKNVIKEPELDGW 231 (268)
Q Consensus 172 ~~~gl~~~f~~i~~~~-----~-------~------pk~~~~~~~~~--~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~ 231 (268)
+ +|+...--.|++.. . + .|...+..... +......++++||||.+|+.| |..+..
T Consensus 171 ~-lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~M----a~g~~~ 245 (291)
T d2bdua1 171 Q-AGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRM----ADGVAN 245 (291)
T ss_dssp H-TTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGT----TTTCSC
T ss_pred H-cCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHH----HhCCcc
Confidence 9 78753222355422 1 1 22233322211 122355788999999999999 876653
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.90 E-value=7.2e-10 Score=86.43 Aligned_cols=88 Identities=23% Similarity=0.300 Sum_probs=65.2
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCC--------HHH----HHHHHHHhcCCCCCCCeEEecC----CCChHHHHHHHHh
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQ--------SRF----ADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQK 200 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~--------~~~----~~~~l~~~~gl~~~f~~i~~~~----~~pk~~~~~~~~~ 200 (268)
++|++.+.| +++|+.++|+||.+ ... .+..++. ++. .+...++.. .+|+|.++..+.+
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~-l~~--~~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK-LGV--PFQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHH-HTS--CCEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHH-cCC--CccEEEecCccccCCCccHHHHHHHH
Confidence 468888877 58899999999953 222 3445555 454 344445443 2599999999998
Q ss_pred cCC----CCCCcEEEEecCc-----------------cchhcccccccccCCeEE
Q 024415 201 KPE----LQGMTLHFVEDRL-----------------ATLKNVIKEPELDGWNLY 234 (268)
Q Consensus 201 ~~~----~~~~~~l~IGDs~-----------------~Di~~~~~~A~~aG~~~v 234 (268)
+++ +..++++||||.. +|++. |+++|+.+.
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~f----A~N~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLF----ALNVGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHH----HHHHTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHH----HHHCCCccc
Confidence 875 7788999999953 89999 999999865
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=2.5e-09 Score=83.66 Aligned_cols=93 Identities=12% Similarity=-0.014 Sum_probs=66.1
Q ss_pred ccCCCCCChHHHH---HcCCCeEEEEcCCCHH---HHHHHH-HHhcCCC--CCCCeEEecCC--C-ChHHHHHHHHhcCC
Q 024415 136 GANRFYPGIPDAL---KFASSRIYIVTTKQSR---FADALL-RELAGVT--IPPDRIYGLGT--G-PKVEVLKQLQKKPE 203 (268)
Q Consensus 136 ~~~~~~pg~~e~L---~~~g~~i~ivTn~~~~---~~~~~l-~~~~gl~--~~f~~i~~~~~--~-pk~~~~~~~~~~~~ 203 (268)
....+.||+.+++ +++|++|+.|||+... .+..-| +. +|+. ...+.++..+. + ++...++ +++
T Consensus 83 ~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~-lG~p~~~~~~vll~~~~~~K~~rr~~Ik----~y~ 157 (209)
T d2b82a1 83 EFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADN-FHIPATNMNPVIFAGDKPGQNTKSQWLQ----DKN 157 (209)
T ss_dssp GGCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHH-TTCCTTTBCCCEECCCCTTCCCSHHHHH----HTT
T ss_pred cccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHH-cCCCcccccceEeeCCCCCchHHHHHHH----HcC
Confidence 3345778999999 6999999999997543 233334 45 5773 33344555543 2 4454444 467
Q ss_pred CCCCcEEEEecCccchhcccccccccCCeEEEeecCCC
Q 024415 204 LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYN 241 (268)
Q Consensus 204 ~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~ 241 (268)
+. +++||..+|+.+ |+.+|+++|-+....+
T Consensus 158 I~----l~~GD~l~Df~a----A~eagi~~iRi~r~~~ 187 (209)
T d2b82a1 158 IR----IFYGDSDNDITA----ARDVGARGIRILRASN 187 (209)
T ss_dssp EE----EEEESSHHHHHH----HHHTTCEEEECCCCTT
T ss_pred eE----EEecCCHHHHhH----HHHcCCCceEeeccCC
Confidence 76 999999999999 9999999999865544
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.85 E-value=1.3e-09 Score=86.61 Aligned_cols=96 Identities=11% Similarity=-0.001 Sum_probs=63.1
Q ss_pred CeEEEEc-CCCHHHHHHHHHHhcCCCCCCC----eE-EecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccc
Q 024415 153 SRIYIVT-TKQSRFADALLRELAGVTIPPD----RI-YGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 226 (268)
Q Consensus 153 ~~i~ivT-n~~~~~~~~~l~~~~gl~~~f~----~i-~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A 226 (268)
..+.+.. ......++..++. ++....+. .+ +.....+|+.+++.++.+++++++++++|||+.+|+.+ +
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~m----l 184 (230)
T d1wr8a_ 110 AGLVIMRETINVETVREIINE-LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDA----F 184 (230)
T ss_dssp SCEEECTTTSCHHHHHHHHHH-TTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHH----H
T ss_pred eeEEEecccccHHHHHHHHHH-hccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHH----H
Confidence 3444443 3345566677777 44421110 01 11112389999999999999999999999999999999 9
Q ss_pred cccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCH
Q 024415 227 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 260 (268)
Q Consensus 227 ~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~ 260 (268)
+.+|. .|++.+ ....+++ .+++++.+.
T Consensus 185 ~~ag~-~vav~n---a~~~~k~---~A~~v~~~~ 211 (230)
T d1wr8a_ 185 KVVGY-KVAVAQ---APKILKE---NADYVTKKE 211 (230)
T ss_dssp HHSSE-EEECTT---SCHHHHT---TCSEECSSC
T ss_pred HHCCe-EEEECC---CCHHHHH---hCCEEECCC
Confidence 99997 455543 3345554 467877653
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.83 E-value=1.2e-08 Score=83.29 Aligned_cols=61 Identities=15% Similarity=0.013 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
.|..+++.+++.++++++++++|||+.+|+.+ .+.+|. .+++. |..++++.. .+++..+..
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~m----l~~~~~-~~am~---na~~~lk~~---a~~i~~~~~ 257 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAM----IEYAGV-GVAVD---NAIPSVKEV---ANFVTKSNL 257 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----HHHSSE-EEECT---TSCHHHHHH---CSEECCCTT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHH----HHhCCc-EEEeC---CCCHHHHHh---CCEEcCCCC
Confidence 35789999999999999999999999999999 899995 44554 344566653 446655433
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.72 E-value=8.5e-08 Score=76.37 Aligned_cols=64 Identities=14% Similarity=0.025 Sum_probs=47.7
Q ss_pred ChHHHHHHHHhcC-CCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhcC
Q 024415 190 PKVEVLKQLQKKP-ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 268 (268)
Q Consensus 190 pk~~~~~~~~~~~-~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l~ 268 (268)
.|..+++.+++.+ +..+++++.|||+.+|+.+ -+.+|. .|++.++. .+. .-.+.++.|..++++
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~M----l~~a~~-~va~~Na~---~~~-------~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPM----FEVVDK-VFIVGSLK---HKK-------AQNVSSIIDVLEVIK 243 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHH----HTTSSE-EEEESSCC---CTT-------CEEESCHHHHHHHHT
T ss_pred ccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHH----HHcCCc-EEEeCCCC---hHH-------HhhhhHHHHHHHhhC
Confidence 4578888888887 5888999999999999999 899995 55565432 121 135788888877764
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.72 E-value=9.8e-08 Score=78.10 Aligned_cols=61 Identities=18% Similarity=0.043 Sum_probs=48.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
.|..+++.+++.++++++++++|||+.+|+.+ .+.+|. .|++.++ .+++++. ++++..+..
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~M----l~~a~~-svam~na---~~~~k~~---A~~v~~~~~ 273 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSM----LEAAGK-GVAMGNA---REDIKSI---ADAVTLTND 273 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHH----HHHSSE-EEECTTC---CHHHHHH---CSEECCCGG
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHH----HHhCCe-EEEeCCC---CHHHHHh---CCEEcCCCC
Confidence 68999999999999999999999999999999 999995 4556543 2455542 456666543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.66 E-value=1.9e-08 Score=82.12 Aligned_cols=61 Identities=18% Similarity=0.078 Sum_probs=48.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
.|..+++.+.+.++++++++++|||+.+|+.+ .+.+|. .|++.+ ..++.+.. +++++.+..
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~m----l~~~~~-sva~~n---a~~~~k~~---A~~i~~~~~ 250 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFM----FEEAGL-RVAMEN---AIEKVKEA---SDIVTLTNN 250 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHH----HTTCSE-EEECTT---SCHHHHHH---CSEECCCTT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHH----HHhCCc-EEEeCC---CCHHHHHh---CCEEcCCCC
Confidence 78999999999999999999999999999999 899996 455543 33455553 457766554
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.60 E-value=3.2e-07 Score=73.42 Aligned_cols=44 Identities=11% Similarity=-0.080 Sum_probs=38.3
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeec
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
.|..+++.+.+.+++++++++++||+.+|+.+ -+.+|. .|.+.+
T Consensus 162 ~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~M----l~~~~~-~vav~n 205 (244)
T d1s2oa1 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGL----FETSAR-GVIVRN 205 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH----HTSSSE-EEECTT
T ss_pred chhHHHHHHHHhccCChhhEEEEcCCCCCHHH----HhhCCc-EEEeCC
Confidence 35889999999999999999999999999999 888985 555543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=4.7e-08 Score=79.54 Aligned_cols=61 Identities=10% Similarity=0.051 Sum_probs=47.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 261 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~ 261 (268)
.|..+++.+++.++++++++++|||+.+|+.| .+.+|. .|++.+ ..+++++. ++++..+..
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~M----l~~ag~-~vam~N---a~~~lk~~---A~~v~~~~~ 250 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEM----LKMARY-SFAMGN---AAENIKQI---ARYATDDNN 250 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----HHHCSE-EEECTT---CCHHHHHH---CSEECCCGG
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHH----HHhCCe-EEEeCC---CCHHHHHh---CCEEcCCCC
Confidence 46889999999999999999999999999999 888886 444543 33566653 457766644
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=5.1e-07 Score=71.00 Aligned_cols=42 Identities=7% Similarity=-0.165 Sum_probs=33.1
Q ss_pred HHHHHHHHh---cCCCCCCcEEEEecCccchhcccccccccCCeEEEeec
Q 024415 192 VEVLKQLQK---KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 192 ~~~~~~~~~---~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
..+++.+.+ +.+++++++++|||+.+|+.+ -+.+|. .|+|..
T Consensus 186 ~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~M----l~~a~~-~vaV~n 230 (232)
T d1xvia_ 186 DQAANWIIATYQQLSGKRPTTLGLGDGPNDAPL----LEVMDY-AVIVKG 230 (232)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHH----HHTSSE-EEECCC
T ss_pred HHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHH----HHhCCe-EEEEeC
Confidence 555555554 568999999999999999999 999996 666653
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=3.7e-07 Score=70.83 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=67.5
Q ss_pred hccCCCCCChHHHH---Hc-CCCeEEEEcCCCHH------HHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCC
Q 024415 135 IGANRFYPGIPDAL---KF-ASSRIYIVTTKQSR------FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPEL 204 (268)
Q Consensus 135 ~~~~~~~pg~~e~L---~~-~g~~i~ivTn~~~~------~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~ 204 (268)
....+++||+.++| ++ .++.+.++|..+.. .....|++.+|- ...+.++.+..|. ....
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~-~~~~~~~~t~~K~----------~~~~ 138 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGP-DFLEQIVLTRDKT----------VVSA 138 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCG-GGGGGEEECSCST----------TSCC
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCC-CCccEEEEccccc----------eecC
Confidence 35578999999998 34 44678888876422 223346652332 2233344333321 2223
Q ss_pred CCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHH
Q 024415 205 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 263 (268)
Q Consensus 205 ~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l 263 (268)
. ++|+|++..+.+ +..+|+.+|+++++||..-.. ..+-..+.+..|.
T Consensus 139 d----~lIDD~p~n~~~----~~~~g~~~il~~~~~N~~~~~----~~~~~Rv~~W~e~ 185 (195)
T d1q92a_ 139 D----LLIDDRPDITGA----EPTPSWEHVLFTACHNQHLQL----QPPRRRLHSWADD 185 (195)
T ss_dssp S----EEEESCSCCCCS----CSSCSSEEEEECCTTTTTCCC----CTTCEEECCTTSC
T ss_pred e----EEecCcHHHHHH----HhcCCCeEEEECCCcccCCCC----CCCceeeCCHHHH
Confidence 3 999999999999 899999999999888743111 1133678888874
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.29 E-value=3.5e-06 Score=61.22 Aligned_cols=109 Identities=20% Similarity=0.151 Sum_probs=74.8
Q ss_pred CCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC-ChHHHHHHHHhcCCCCCCcEEEEec
Q 024415 139 RFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG-PKVEVLKQLQKKPELQGMTLHFVED 214 (268)
Q Consensus 139 ~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~l~IGD 214 (268)
++.|++.+.+ ++.|+++.++|+.....+..+.+. +|+. .+++.... -|...++.+... ..+.||||
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~-lgI~----~v~~~~~p~~k~~~v~~~q~~-----~~v~~vGD 90 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE-LNLD----LVIAEVLPHQKSEEVKKLQAK-----EVVAFVGD 90 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-HTCS----EEECSCCHHHHHHHHHHHTTT-----SCEEEEEC
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhh-hhhh----hhccccchhHHHHHHHHHHcC-----CEEEEEeC
Confidence 6889999988 799999999999999999999999 7984 34443331 345666665442 45699999
Q ss_pred CccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEE--cCHhHHHhhcC
Q 024415 215 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKLK 268 (268)
Q Consensus 215 s~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~--~~~~~l~~~l~ 268 (268)
+.+|..+ -+.+++. +.+..+. +.-+ ...|+++ .++..+.+.++
T Consensus 91 g~nD~~a----L~~Advg-ia~~~~~---~~~~---~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 91 GINDAPA----LAQADLG-IAVGSGS---DVAV---ESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp SSSSHHH----HHHSSEE-EEECCC--------------SEEESSCCTHHHHHHHC
T ss_pred CCCcHHH----HHhCCee-eecCccC---HHHH---HhCCEEEECCCHHHHHHHhC
Confidence 9999999 8888864 3343332 2222 2466777 45777776654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.15 E-value=1.7e-05 Score=64.00 Aligned_cols=58 Identities=10% Similarity=-0.001 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEc
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 258 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~ 258 (268)
.|..+++.+.+.++++++++++|||+.+|+.+ .+.+|. .|++.++ ..++++. ++++..
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~M----l~~a~~-~va~~na---~~~~k~~---a~~v~~ 264 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAM----LSNFKY-SFAVANA---TDSAKSH---AKCVLP 264 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH----HHSCSE-EEECTTC---CHHHHHH---SSEECS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHH----HHhCCc-EEEeCCC---CHHHHHh---CCEEEC
Confidence 78999999999999999999999999999999 899996 4556543 3455553 346654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.11 E-value=3.7e-06 Score=64.08 Aligned_cols=97 Identities=12% Similarity=0.102 Sum_probs=74.6
Q ss_pred HHHHcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhccccc
Q 024415 146 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 225 (268)
Q Consensus 146 e~L~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~ 225 (268)
..|+..|+.++++|......+....+. .++.. ++. ...+|...++.+.+++++++++|+||||..+|+.+
T Consensus 42 ~~l~~~gi~~~iis~~~~~~v~~~~~~-l~~~~----~~~-~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~---- 111 (177)
T d1k1ea_ 42 KMLMDADIQVAVLSGRDSPILRRRIAD-LGIKL----FFL-GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPA---- 111 (177)
T ss_dssp HHHHHTTCEEEEEESCCCHHHHHHHHH-HTCCE----EEE-SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----
T ss_pred HHHhhhcEEEEEecCCchhHHHHHHhh-hcccc----ccc-ccccHHHHHHHHHHHhcCCcceeEEecCCccHHHH----
Confidence 344789999999999999999999888 57642 222 22379999999999999999999999999999999
Q ss_pred ccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 226 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 226 A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
-+.+|...+ +. +.....+. ..+++..+
T Consensus 112 l~~~g~sia-p~---nA~~~vk~---~A~~Vt~~ 138 (177)
T d1k1ea_ 112 FAACGTSFA-VA---DAPIYVKN---AVDHVLST 138 (177)
T ss_dssp HHHSSEEEE-CT---TSCHHHHT---TSSEECSS
T ss_pred HhhCCeEEE-cC---CccHHHHH---hCCEEeCC
Confidence 999997444 33 33344443 46677665
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.91 E-value=6.5e-05 Score=56.39 Aligned_cols=114 Identities=13% Similarity=0.081 Sum_probs=76.9
Q ss_pred CCCCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCe---------------------------EEecC
Q 024415 138 NRFYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELAGVTIPPDR---------------------------IYGLG 187 (268)
Q Consensus 138 ~~~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~---------------------------i~~~~ 187 (268)
-|+.|++++++ ++.|+++.++|+.....+..+.+. +|+...-.. +++..
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRR-IGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHH-TTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHH-cCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 47889999988 799999999999999999999999 798533221 22221
Q ss_pred CC-ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC--HhHHH
Q 024415 188 TG-PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ--LSDFS 264 (268)
Q Consensus 188 ~~-pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~--~~~l~ 264 (268)
.. .|..+++.+...- ..+.||||+.+|..+ -+.|.+ .|++..| +. .-++ ..|+++.+ +..+.
T Consensus 98 ~p~~K~~lv~~l~~~g----~~Va~vGDG~nD~~A----L~~Adv-GIa~~~g--t~-~a~~---aAdivl~~~~l~~v~ 162 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYD----EITAMTGDGVNDAPA----LKKAEI-GIAMGSG--TA-VAKT---ASEMVLADDNFSTIV 162 (168)
T ss_dssp CHHHHHHHHHHHHHTT----CCEEEEECSGGGHHH----HHHSSE-EEEETTS--CH-HHHH---TCSEEETTCCTHHHH
T ss_pred chhHHHHHHHHHHhcc----cceeEEecCCCCHHH----HHhCCE-EEEeccc--cH-HHHH---hCCEEEccCCHHHHH
Confidence 11 2455666666553 345999999999999 888875 3344332 22 2222 35677665 66665
Q ss_pred hhc
Q 024415 265 RKL 267 (268)
Q Consensus 265 ~~l 267 (268)
+.+
T Consensus 163 ~~I 165 (168)
T d1wpga2 163 AAV 165 (168)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.91 E-value=3.3e-06 Score=73.09 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=73.2
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHHHHHHHHhc--------CCCCCCCeEEecCCCCh-----------------
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFADALLRELA--------GVTIPPDRIYGLGTGPK----------------- 191 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~~~~l~~~~--------gl~~~f~~i~~~~~~pk----------------- 191 (268)
.-|.+..+| ++.|.++.++||++-.+++..+..++ ...++||.||+...||.
T Consensus 186 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~ 265 (458)
T d2bdea1 186 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT 265 (458)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCC
T ss_pred CChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCc
Confidence 356677777 68999999999999999999998766 44578999988654322
Q ss_pred --------------HHHHHHHHhcCCCCCCcEEEEecCc-cchhccccccc-ccCCeEEEeecC
Q 024415 192 --------------VEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPE-LDGWNLYLGDWG 239 (268)
Q Consensus 192 --------------~~~~~~~~~~~~~~~~~~l~IGDs~-~Di~~~~~~A~-~aG~~~v~v~~g 239 (268)
.--+..+.+-.+....+++||||+. .||.. ++ ..||.+++|...
T Consensus 266 l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~----~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 266 MTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILR----LKKDCNWRTALVVEE 325 (458)
T ss_dssp EEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHH----HHHHHCSEEEEECTT
T ss_pred cccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhh----hhhhcCCceEEehHH
Confidence 1122455555577788999999995 79888 54 689999999754
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.07 E-value=0.00053 Score=48.39 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=26.3
Q ss_pred HcCCCeEEEEcCCC---------------HHHHHHHHHHhcCCCCCCCeEEec
Q 024415 149 KFASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRIYGL 186 (268)
Q Consensus 149 ~~~g~~i~ivTn~~---------------~~~~~~~l~~~~gl~~~f~~i~~~ 186 (268)
++.|+.|.+.|.+. ...+...|+. .|+ .+|.++-+
T Consensus 37 ~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~-~gI--~Yd~Li~g 86 (124)
T d1xpja_ 37 HQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDK-HQV--PYDEILVG 86 (124)
T ss_dssp HHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHH-TTC--CCSEEEEC
T ss_pred HHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHH-cCC--CceEEEEC
Confidence 68999999999874 3457777888 688 46766554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.50 E-value=0.0013 Score=52.18 Aligned_cols=59 Identities=5% Similarity=-0.109 Sum_probs=47.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcC
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 259 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~ 259 (268)
.|..+++.+.++++++++++++|||+.+|+.| .+.+|. .|+|.++ .+++++. .+++..+
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~M----l~~a~~-svav~na---~~~lk~~---A~~vt~~ 244 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISM----LRHAAI-GVAMGQA---KEDVKAA---ADYVTAP 244 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH----HHHSSE-EEECTTS---CHHHHHH---SSEECCC
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHH----HHhCCe-EEEeCCC---CHHHHHh---CCEEeCC
Confidence 78999999999999999999999999999999 899997 5666543 3455553 3466555
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.33 E-value=0.071 Score=41.35 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=34.7
Q ss_pred ccCCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCC
Q 024415 136 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV 176 (268)
Q Consensus 136 ~~~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl 176 (268)
....+.||+.++|+ ++-.+.+|+|.+.+++++..-+. .|+
T Consensus 78 ~~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~-~gf 119 (308)
T d1y8aa1 78 LSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASM-IGV 119 (308)
T ss_dssp HHCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-TTC
T ss_pred hceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhh-cCC
Confidence 35679999999995 55599999999999999999998 688
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.27 E-value=0.0065 Score=42.45 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=28.0
Q ss_pred CCCChHHHH---HcCCCeEEEEcCCCHHHH---HHHHHHhcCCCCCCCeE
Q 024415 140 FYPGIPDAL---KFASSRIYIVTTKQSRFA---DALLRELAGVTIPPDRI 183 (268)
Q Consensus 140 ~~pg~~e~L---~~~g~~i~ivTn~~~~~~---~~~l~~~~gl~~~f~~i 183 (268)
+.|++.++| +++|+.|++.|.++.... ...|++ .|+ .|+.+
T Consensus 22 Pi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~-~~i--~yd~i 68 (122)
T d2obba1 22 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA-RGL--EFYAA 68 (122)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT-TTC--CCSEE
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHH-cCC--Cceeh
Confidence 446666666 689999999999876554 445555 455 46655
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.0016 Score=50.34 Aligned_cols=42 Identities=14% Similarity=-0.126 Sum_probs=33.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEec----CccchhcccccccccCCeEEEeec
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLGDW 238 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGD----s~~Di~~~~~~A~~aG~~~v~v~~ 238 (268)
.|..++++++ +.+++++++||| +.+|+.+ -+.+|...++++.
T Consensus 185 sKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~M----l~~~g~~~~~v~~ 230 (243)
T d2amya1 185 DKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEI----FTDPRTMGYSVTA 230 (243)
T ss_dssp SGGGGGGGTT---TSCCSEEEEEECSCC---CCCHH----HHCTTEEEEECSS
T ss_pred CHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHH----HHccCCcEEEeCC
Confidence 6788888775 568899999999 6699999 9999977777754
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.83 E-value=0.014 Score=44.19 Aligned_cols=60 Identities=8% Similarity=0.047 Sum_probs=44.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCccchhcccccccccCCeEEEeecCCCCHHHHHhhcCCCCEEEcCHhHHHhhc
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 267 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~~~~~p~~~~~~~~~l~~~l 267 (268)
.|..++++++.+ +++++|||+.+|+.| -+.+|. .++|..|- .+ +..++++.+..|+..+|
T Consensus 159 ~Kg~al~~l~~~-----~~~i~~GDs~ND~~M----f~~~~~-~~av~~g~-~~-------~~A~~~~~~~~ev~~~l 218 (229)
T d1u02a_ 159 NKGSAIRSVRGE-----RPAIIAGDDATDEAA----FEANDD-ALTIKVGE-GE-------THAKFHVADYIEMRKIL 218 (229)
T ss_dssp CHHHHHHHHHTT-----SCEEEEESSHHHHHH----HHTTTT-SEEEEESS-SC-------CCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHhcc-----ccceeecCCCChHHH----HhccCC-eEEEEeCC-CC-------ccCeEEcCCHHHHHHHH
Confidence 789999999864 578999999999999 777764 34555552 11 34568999999876665
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.62 E-value=0.0064 Score=46.53 Aligned_cols=49 Identities=14% Similarity=-0.065 Sum_probs=38.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEecCc----cchhcccccccccCCeEEEeecCCCCHHHHHh
Q 024415 190 PKVEVLKQLQKKPELQGMTLHFVEDRL----ATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 248 (268)
Q Consensus 190 pk~~~~~~~~~~~~~~~~~~l~IGDs~----~Di~~~~~~A~~aG~~~v~v~~g~~~~~~~~~ 248 (268)
.|..+++.+++ .++++++++||+. +|+.+ -+.+|...++|. |..+..+.
T Consensus 185 sKg~al~~L~~---~~~~ev~afGD~~~~G~ND~em----l~~a~~~~~av~---na~~~~k~ 237 (244)
T d2fuea1 185 DKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEI----FADPRTVGHSVV---SPQDTVQR 237 (244)
T ss_dssp STTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHH----HHSTTSEEEECS---SHHHHHHH
T ss_pred cHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHH----HHcCCCcEEEcC---CHHHHHHH
Confidence 78999999875 4889999999975 99999 899998788776 34444443
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.47 E-value=0.012 Score=44.06 Aligned_cols=82 Identities=9% Similarity=-0.063 Sum_probs=57.3
Q ss_pred CCCCCChHHHHH--cCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCC--ChHHHHHHHHhcCCCCCCcEEEEe
Q 024415 138 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPELQGMTLHFVE 213 (268)
Q Consensus 138 ~~~~pg~~e~L~--~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~--pk~~~~~~~~~~~~~~~~~~l~IG 213 (268)
...+||+.++|+ +..+.++|.|.+...+++.+++. +.-...|......+.+ .....++. ....+-...++++|+
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~-ldp~~~~~~~~~r~~c~~~~~~~~Kd-L~~l~~~l~~vvivD 131 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADL-LDKWGAFRARLFRESCVFHRGNYVKD-LSRLGRDLRRVLILD 131 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHH-HCSSCCEEEEECGGGSEEETTEEECC-GGGSCSCGGGEEEEC
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHH-hccCCceeEEEEeeeeeecCCccccc-HhhcCCCHHHeEEEc
Confidence 458899999993 66799999999999999999999 5655555555544432 11111111 234566778999999
Q ss_pred cCccchhc
Q 024415 214 DRLATLKN 221 (268)
Q Consensus 214 Ds~~Di~~ 221 (268)
|++.-...
T Consensus 132 d~~~~~~~ 139 (181)
T d1ta0a_ 132 NSPASYVF 139 (181)
T ss_dssp SCGGGGTT
T ss_pred CChhhhhc
Confidence 99865544
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=93.34 E-value=0.013 Score=46.05 Aligned_cols=46 Identities=13% Similarity=0.262 Sum_probs=28.4
Q ss_pred HHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhc
Q 024415 166 ADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 166 ~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~ 221 (268)
++.+++. +|+.. -+.+..+|+..+..+++.. +.+ +.||+....+..
T Consensus 191 l~~l~~~-~~i~~-~~~~a~GD~~ND~~Ml~~a----~~s----vav~na~~~lk~ 236 (260)
T d2rbka1 191 IDEIIRH-FGIKL-EETMSFGDGGNDISMLRHA----AIG----VAMGQAKEDVKA 236 (260)
T ss_dssp HHHHHHH-HTCCG-GGEEEEECSGGGHHHHHHS----SEE----EECTTSCHHHHH
T ss_pred HHHHHHh-ccccH-hheeEecCCcccHHHHHhC----CeE----EEeCCCCHHHHH
Confidence 4566666 67742 2445556666788888665 334 777877655544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.65 E-value=0.017 Score=43.75 Aligned_cols=12 Identities=50% Similarity=0.816 Sum_probs=11.1
Q ss_pred eeEeecCccccC
Q 024415 4 LYALDFDGVLCD 15 (268)
Q Consensus 4 ~viFD~DGTL~d 15 (268)
+|+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 699999999996
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.74 E-value=0.059 Score=40.73 Aligned_cols=14 Identities=36% Similarity=0.527 Sum_probs=11.7
Q ss_pred eeEeecCccccCch
Q 024415 4 LYALDFDGVLCDSC 17 (268)
Q Consensus 4 ~viFD~DGTL~d~~ 17 (268)
+++||+||||++..
T Consensus 3 i~lFDlDGTLl~~~ 16 (244)
T d2fuea1 3 LCLFDVDGTLTPAR 16 (244)
T ss_dssp EEEEESBTTTBSTT
T ss_pred EEEEccccCccCCC
Confidence 45689999999876
|
| >d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: ThiG-like family: ThiG-like domain: Thiazole biosynthesis protein ThiG species: Bacillus subtilis [TaxId: 1423]
Probab=90.53 E-value=0.28 Score=37.63 Aligned_cols=91 Identities=16% Similarity=0.073 Sum_probs=71.1
Q ss_pred CCCCChHHHHH------cCCCeEEEEcCCCHHHHHHHHHHhcCCCCC--CCeEEecCCC-ChHHHHHHHHhcCCCCCCcE
Q 024415 139 RFYPGIPDALK------FASSRIYIVTTKQSRFADALLRELAGVTIP--PDRIYGLGTG-PKVEVLKQLQKKPELQGMTL 209 (268)
Q Consensus 139 ~~~pg~~e~L~------~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~--f~~i~~~~~~-pk~~~~~~~~~~~~~~~~~~ 209 (268)
.++|+..++|+ +.|+.+...+|.+...+++..+ .|-.-. .-.-+++..| -+|+.++.+.++.+++
T Consensus 106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~ak~Le~--~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~~~~~vP---- 179 (251)
T d1xm3a_ 106 SLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEE--LGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVP---- 179 (251)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHH--HTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSC----
T ss_pred CcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHHHHHHHH--cCChhHHHhhhhhhcCCCcCChHHHHHHHhcCCcc----
Confidence 68999999992 8999999999999877766666 475421 1122333444 7799999999999998
Q ss_pred EEEecC---ccchhcccccccccCCeEEEeecC
Q 024415 210 HFVEDR---LATLKNVIKEPELDGWNLYLGDWG 239 (268)
Q Consensus 210 l~IGDs---~~Di~~~~~~A~~aG~~~v~v~~g 239 (268)
+.|+-+ ++|... |...|++.|++++.
T Consensus 180 vIvDAGIG~pSdAa~----AMElG~daVLvNTA 208 (251)
T d1xm3a_ 180 VIVDAGIGSPKDAAY----AMELGADGVLLNTA 208 (251)
T ss_dssp BEEESCCCSHHHHHH----HHHTTCSEEEESHH
T ss_pred EEEecCCCCHHHHHH----HHHccCCEEEechh
Confidence 888876 479888 99999999999875
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=90.14 E-value=0.049 Score=40.33 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=36.3
Q ss_pred HcCCCeEEEEcCCC-HHHHHHHHHHhcCCCCCCCeEEecCCCChHHHHHHHHhcCCCCCCcEEEEecCccchhc
Q 024415 149 KFASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKN 221 (268)
Q Consensus 149 ~~~g~~i~ivTn~~-~~~~~~~l~~~~gl~~~f~~i~~~~~~pk~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~ 221 (268)
++.+.........+ ....+..+++ .++. +-+.++-++.-++.++++.... + +.++|+...+..
T Consensus 67 ~~l~~~~~~~~~~~K~~~l~~~~~~-~~i~-~~~v~~vGDd~nDl~~l~~~g~----s----iap~nA~~~vk~ 130 (177)
T d1k1ea_ 67 ADLGIKLFFLGKLEKETACFDLMKQ-AGVT-AEQTAYIGDDSVDLPAFAACGT----S----FAVADAPIYVKN 130 (177)
T ss_dssp HHHTCCEEEESCSCHHHHHHHHHHH-HTCC-GGGEEEEECSGGGHHHHHHSSE----E----EECTTSCHHHHT
T ss_pred hhhcccccccccccHHHHHHHHHHH-hcCC-cceeEEecCCccHHHHHhhCCe----E----EEcCCccHHHHH
Confidence 44444444433333 3345666777 6774 3445555666688888766543 3 777787666555
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.51 E-value=0.098 Score=39.49 Aligned_cols=15 Identities=33% Similarity=0.479 Sum_probs=13.6
Q ss_pred ceeEeecCccccCch
Q 024415 3 DLYALDFDGVLCDSC 17 (268)
Q Consensus 3 ~~viFD~DGTL~d~~ 17 (268)
|+++||+||||++..
T Consensus 4 kl~~fDlDGTLl~~~ 18 (243)
T d2amya1 4 ALCLFDVDGTLTAPR 18 (243)
T ss_dssp EEEEEESBTTTBCTT
T ss_pred EEEEEcCcCCeeCCC
Confidence 689999999999866
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=87.55 E-value=0.13 Score=42.67 Aligned_cols=18 Identities=22% Similarity=0.215 Sum_probs=15.2
Q ss_pred CceeEeecCccccCchhh
Q 024415 2 ADLYALDFDGVLCDSCGE 19 (268)
Q Consensus 2 ~~~viFD~DGTL~d~~~~ 19 (268)
+|.|+||+||||++....
T Consensus 1 ~~~i~fd~dGVll~~~~~ 18 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERC 18 (380)
T ss_dssp CCEEEECSBTTTBCSHHH
T ss_pred CceEEEeCCcEEEcceee
Confidence 378999999999998833
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=82.68 E-value=0.27 Score=36.45 Aligned_cols=78 Identities=14% Similarity=-0.004 Sum_probs=47.6
Q ss_pred HcCCCeEEEEcCCCHHHHHHHHHHhcCCCCCCCeEEecCCCCh-HHHHHHHHhcCCCCCCcEEEEecCccchhccccccc
Q 024415 149 KFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPK-VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 227 (268)
Q Consensus 149 ~~~g~~i~ivTn~~~~~~~~~l~~~~gl~~~f~~i~~~~~~pk-~~~~~~~~~~~~~~~~~~l~IGDs~~Di~~~~~~A~ 227 (268)
++.+-++++++......--..+..++|++.. .+.-.+.-+ ...++++. +.|.. ++|||+.. ... |+
T Consensus 91 ~~~~~kiavV~~~~~~~~~~~~~~ll~~~i~---~~~~~~~~e~~~~v~~l~-~~G~~----vVVG~~~~-~~~----A~ 157 (186)
T d2pjua1 91 GKLTSSIGVVTYQETIPALVAFQKTFNLRLD---QRSYITEEDARGQINELK-ANGTE----AVVGAGLI-TDL----AE 157 (186)
T ss_dssp TCTTSCEEEEEESSCCHHHHHHHHHHTCCEE---EEEESSHHHHHHHHHHHH-HTTCC----EEEESHHH-HHH----HH
T ss_pred HHhCCCEEEEeCCccchHHHHHHHHhCCceE---EEEecCHHHHHHHHHHHH-HCCCC----EEECChHH-HHH----HH
Confidence 4677889999865443333444443676422 112222112 33445444 45888 99999954 456 89
Q ss_pred ccCCeEEEeecC
Q 024415 228 LDGWNLYLGDWG 239 (268)
Q Consensus 228 ~aG~~~v~v~~g 239 (268)
..|++.+.+.+|
T Consensus 158 ~~Gl~~vli~S~ 169 (186)
T d2pjua1 158 EAGMTGIFIYSA 169 (186)
T ss_dssp HTTSEEEESSCH
T ss_pred HcCCCEEEEeCH
Confidence 999999998765
|